Query         gi|254780309|ref|YP_003064722.1| comF family protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 59
No_of_seqs    104 out of 2972
Neff          6.1 
Searched_HMMs 23785
Date          Mon May 30 08:14:25 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780309.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2ji4_A Phosphoribosyl pyrophos  99.1 3.1E-10 1.3E-14   75.6   7.1   46   13-58    268-313 (379)
  2 1wd5_A Hypothetical protein TT  99.0 2.1E-10 8.8E-15   76.5   5.9   43   12-54    115-157 (208)
  3 1pzm_A HGPRT, hypoxanthine-gua  99.0 3.1E-10 1.3E-14   75.5   6.4   52    4-55    105-156 (211)
  4 3hvu_A Hypoxanthine phosphorib  99.0   5E-10 2.1E-14   74.4   7.0   53    3-55    102-154 (204)
  5 1tc1_A Protein (hypoxanthine p  99.0 5.4E-10 2.3E-14   74.2   6.1   48    8-55     94-141 (220)
  6 3dah_A Ribose-phosphate pyroph  99.0 7.2E-10   3E-14   73.6   6.7   48   11-58    210-257 (319)
  7 1fsg_A HGPRTASE, hypoxanthine-  99.0 9.5E-10   4E-14   72.9   7.3   49    7-55    132-180 (233)
  8 2h06_A Ribose-phosphate pyroph  99.0 5.4E-10 2.3E-14   74.2   6.0   48   11-58    207-254 (326)
  9 1cjb_A Protein (hypoxanthine-g  99.0 6.1E-10 2.6E-14   73.9   6.2   49    7-55    127-175 (231)
 10 1yfz_A Hypoxanthine-guanine ph  99.0   9E-10 3.8E-14   73.1   6.9   53    3-55    104-156 (205)
 11 1dku_A Protein (phosphoribosyl  99.0 5.1E-10 2.1E-14   74.4   5.4   47   12-58    212-258 (317)
 12 1vdm_A Purine phosphoribosyltr  99.0 6.9E-10 2.9E-14   73.7   5.9   47   10-56     76-122 (153)
 13 2jbh_A HHGP; glycosyltransfera  99.0 1.1E-09 4.7E-14   72.6   6.8   46   10-55    127-172 (225)
 14 3o7m_A Hypoxanthine phosphorib  99.0 1.3E-09 5.5E-14   72.2   6.8   50    6-55     83-132 (186)
 15 1u9y_A RPPK;, ribose-phosphate  98.9 1.1E-09 4.5E-14   72.7   6.2   47   12-58    200-246 (284)
 16 1z7g_A HGPRT, HGPRTASE, hypoxa  98.9 1.3E-09 5.4E-14   72.2   6.5   46   10-55    119-164 (217)
 17 2geb_A Hypoxanthine-guanine ph  98.9 1.6E-09 6.9E-14   71.6   6.7   50    6-55     87-136 (185)
 18 3ohp_A Hypoxanthine phosphorib  98.9 1.3E-09 5.3E-14   72.2   5.8   49    7-55     81-129 (177)
 19 2ywu_A Hypoxanthine-guanine ph  98.9 1.7E-09 7.1E-14   71.6   5.9   49    7-55     85-133 (181)
 20 1hgx_A HGXPRTASE, hypoxanthine  98.9 2.1E-09 8.8E-14   71.1   6.1   50    6-55     84-133 (183)
 21 1a3c_A PYRR, pyrimidine operon  98.9 2.6E-09 1.1E-13   70.5   6.4   46   10-55     91-137 (181)
 22 1vch_A Phosphoribosyltransfera  98.9 4.3E-09 1.8E-13   69.4   7.1   45   12-56    115-159 (175)
 23 1ufr_A TT1027, PYR mRNA-bindin  98.8 4.7E-09   2E-13   69.2   6.5   50    7-56     86-136 (181)
 24 1dqn_A Guanine phosphoribosylt  98.7 1.2E-09 5.2E-14   72.3  -0.1   51    3-53    104-154 (230)
 25 1w30_A PYRR bifunctional prote  98.7 2.4E-08   1E-12   65.3   6.2   45   11-55    106-151 (201)
 26 2jky_A Hypoxanthine-guanine ph  98.6 1.4E-09   6E-14   72.0  -2.4   39   11-49     96-134 (213)
 27 1g2q_A Adenine phosphoribosylt  98.6 9.6E-08   4E-12   62.1   5.9   40   15-54    120-159 (187)
 28 1ecf_A Glutamine phosphoribosy  98.5 7.2E-08   3E-12   62.8   4.8   48   11-58    353-400 (504)
 29 1qb7_A APRT, adenine phosphori  98.5 2.1E-07 8.8E-12   60.3   5.9   40   15-54    136-175 (236)
 30 1ao0_A Glutamine phosphoribosy  98.5 1.5E-07 6.4E-12   61.0   5.0   47   11-57    332-378 (459)
 31 2p1z_A Phosphoribosyltransfera  98.5 2.1E-07 8.7E-12   60.3   5.5   40   15-54    112-151 (180)
 32 1y0b_A Xanthine phosphoribosyl  98.4   4E-07 1.7E-11   58.7   7.0   41   15-55    118-158 (197)
 33 2wns_A Orotate phosphoribosylt  98.4 2.2E-07 9.1E-12   60.2   5.0   40   15-54    109-148 (205)
 34 1o57_A PUR operon repressor; p  98.4 3.6E-07 1.5E-11   59.0   6.0   42   14-55    193-234 (291)
 35 2yzk_A OPRT, oprtase, orotate   98.4 4.1E-07 1.7E-11   58.7   6.1   42   13-54    102-143 (178)
 36 2ps1_A Orotate phosphoribosylt  98.4 4.2E-07 1.8E-11   58.6   6.0   40   15-54    123-162 (226)
 37 1zn8_A APRT, adenine phosphori  98.4 4.7E-07   2E-11   58.4   6.0   40   15-54    118-157 (180)
 38 3m3h_A OPRT, oprtase, orotate   98.4 5.3E-07 2.2E-11   58.1   6.0   40   15-54    135-174 (234)
 39 2dy0_A APRT, adenine phosphori  98.4 5.7E-07 2.4E-11   57.9   5.9   39   16-54    125-163 (190)
 40 3mjd_A Orotate phosphoribosylt  98.4 5.2E-07 2.2E-11   58.1   5.6   40   15-54    134-173 (232)
 41 1l1q_A Adenine phosphoribosylt  98.3 7.1E-07   3E-11   57.4   5.3   39   15-53    115-155 (186)
 42 3dez_A OPRT, oprtase, orotate   98.3 9.5E-07   4E-11   56.7   6.0   40   15-54    147-186 (243)
 43 2aee_A OPRT, oprtase, orotate   98.2 1.6E-06 6.8E-11   55.5   5.9   40   15-54    115-154 (211)
 44 3n2l_A OPRT, oprtase, orotate   98.2 2.3E-06 9.7E-11   54.6   6.1   39   16-54    141-179 (238)
 45 1lh0_A OMP synthase; loop clos  98.1 4.7E-06   2E-10   53.0   5.4   40   16-55    116-155 (213)
 46 1nul_A XPRT, xanthine-guanine   98.0 1.4E-06 5.9E-11   55.8   2.0   37   13-54     77-113 (152)
 47 2ehj_A Uracil phosphoribosyltr  97.9 2.2E-05 9.3E-10   49.3   6.9   49    8-56    114-162 (208)
 48 1o5o_A Uracil phosphoribosyltr  97.9 1.3E-05 5.6E-10   50.5   5.2   49    8-56    127-175 (221)
 49 1i5e_A Uracil phosphoribosyltr  97.8 2.6E-05 1.1E-09   48.9   5.2   49    8-56    115-163 (209)
 50 1v9s_A Uracil phosphoribosyltr  97.8 1.8E-05 7.5E-10   49.8   4.3   48    9-56    115-162 (208)
 51 1bd3_D Uprtase, uracil phospho  97.5 0.00011 4.5E-09   45.6   4.9   49    7-55    146-196 (243)
 52 2e55_A Uracil phosphoribosyltr  97.5 0.00017 7.1E-09   44.6   5.5   44   13-56    117-160 (208)
 53 3dmp_A Uracil phosphoribosyltr  97.3 0.00013 5.4E-09   45.2   3.5   44   12-55    124-169 (217)
 54 1xtt_A Probable uracil phospho  97.0 0.00057 2.4E-08   41.7   4.5   41   16-56    132-172 (216)
 55 1dcf_A ETR1 protein; beta-alph  78.1     2.9 0.00012   21.7   4.7   32   13-47      3-34  (136)
 56 3eod_A Protein HNR; response r  59.3      11 0.00046   18.6   4.7   31   15-48      5-35  (130)
 57 1gmx_A GLPE protein; transfera  50.9      14 0.00058   18.0   3.7   34   15-51     56-89  (108)
 58 3ohg_A Uncharacterized protein  45.2      13 0.00056   18.1   2.9   34   16-49    197-237 (285)
 59 2pkp_A Homoaconitase small sub  44.8     7.1  0.0003   19.6   1.4   48    8-55     42-89  (170)
 60 3h5i_A Response regulator/sens  43.0      19 0.00078   17.3   3.3   29   15-46      3-31  (140)
 61 1wif_A RSGI RUH-020, riken cDN  42.5      21 0.00087   17.1   3.6   41   15-55     68-109 (126)
 62 3ilm_A ALR3790 protein; rhodan  42.2      21 0.00089   17.0   4.1   33   16-51     55-87  (141)
 63 3gge_A PDZ domain-containing p  41.9      21 0.00089   17.0   4.9   43   16-58     49-91  (95)
 64 2yt7_A Amyloid beta A4 precurs  41.4      22 0.00091   17.0   4.5   45   14-58     55-100 (101)
 65 2fsx_A RV0390, COG0607: rhodan  40.1      23 0.00096   16.8   3.7   33   16-51     79-111 (148)
 66 2kom_A Partitioning defective   38.9      24   0.001   16.7   4.6   41   16-56     79-119 (121)
 67 2vsv_A Rhophilin-2; scaffold p  38.4      24   0.001   16.7   3.6   41   15-55     63-103 (109)
 68 1vr0_A Probable 2-phosphosulfo  38.0      25   0.001   16.7   3.6   35   12-51     26-60  (247)
 69 1qxn_A SUD, sulfide dehydrogen  37.6      24   0.001   16.7   3.2   34   15-51     80-113 (137)
 70 2jba_A Phosphate regulon trans  36.3      26  0.0011   16.5   4.5   27   17-46      2-28  (127)
 71 1tq1_A AT5G66040, senescence-a  36.1      24   0.001   16.7   3.0   33   16-51     81-113 (129)
 72 1gpj_A Glutamyl-tRNA reductase  34.9      25   0.001   16.6   2.9   38   10-51    160-197 (404)
 73 2vsp_A PDZ domain-containing p  33.5      29  0.0012   16.2   3.6   40   16-56     47-86  (91)
 74 1u7z_A Coenzyme A biosynthesis  32.3      31  0.0013   16.1   4.4   39   13-51      4-55  (226)
 75 3bpu_A Membrane-associated gua  31.3      32  0.0013   16.0   4.7   42   16-57     45-86  (88)
 76 3lte_A Response regulator; str  31.2      32  0.0014   16.0   4.4   28   16-46      5-32  (132)
 77 3hix_A ALR3790 protein; rhodan  30.9      33  0.0014   16.0   4.1   33   16-51     51-83  (106)
 78 2hcu_A 3-isopropylmalate dehyd  30.8      17 0.00071   17.5   1.5   43   13-55     81-123 (213)
 79 1qo0_D AMIR; binding protein,   30.3      33  0.0014   15.9   3.5   40   10-52      5-44  (196)
 80 3kht_A Response regulator; PSI  30.0      18 0.00076   17.4   1.6   29   15-46      3-31  (144)
 81 1yt8_A Thiosulfate sulfurtrans  28.0      37  0.0015   15.7   4.2   33   16-51     62-94  (539)
 82 3h5j_A 3-isopropylmalate dehyd  26.3      18 0.00074   17.4   1.0   43   13-55     60-102 (171)
 83 2d92_A INAD-like protein; PDZ   25.4      41  0.0017   15.5   4.7   41   15-56     63-104 (108)
 84 1v7l_A 3-isopropylmalate dehyd  25.4      12  0.0005   18.4  -0.0   48    8-55     42-89  (163)
 85 1u37_A Amyloid beta A4 precurs  24.7      42  0.0018   15.4   3.8   41   15-55     48-89  (89)
 86 3h1g_A Chemotaxis protein CHEY  24.7      43  0.0018   15.4   3.7   33   15-50      3-35  (129)
 87 2k0z_A Uncharacterized protein  24.4      43  0.0018   15.3   4.5   32   15-49     54-85  (110)
 88 2vdc_G Glutamate synthase [NAD  24.1      44  0.0018   15.3   5.5   34   15-52    262-295 (456)
 89 2yyv_A Probable 2-phosphosulfo  24.1      44  0.0018   15.3   3.4   34   13-51     10-43  (227)
 90 1tks_A 3,4-dihydroxy-2-butanon  24.0      12  0.0005   18.4  -0.3   11   15-25     16-26  (204)
 91 3d1p_A Putative thiosulfate su  23.9      44  0.0019   15.3   4.2   33   16-51     90-122 (139)
 92 1uep_A Membrane associated gua  23.4      39  0.0017   15.6   2.3   41   16-56     55-95  (103)
 93 2koj_A Partitioning defective   23.2      46  0.0019   15.2   4.9   42   16-57     60-101 (111)
 94 1qys_A TOP7; alpha-beta, novel  22.2      33  0.0014   16.0   1.7   40   17-57     14-57  (106)
 95 1ujv_A Membrane associated gua  21.6      49  0.0021   15.0   4.3   40   16-55     50-89  (96)
 96 1wfg_A Regulating synaptic mem  21.2      50  0.0021   15.0   4.7   44   15-58     84-128 (131)
 97 3c97_A Signal transduction his  20.9      51  0.0021   15.0   3.8   31   13-46      6-36  (140)
 98 1vae_A Rhophilin 2, rhophilin,  20.9      51  0.0021   14.9   4.5   39   16-54     56-94  (111)
 99 2q9v_A Membrane-associated gua  20.8      39  0.0016   15.6   1.9   40   16-55     48-87  (90)
100 2rdm_A Response regulator rece  20.6      52  0.0022   14.9   4.7   20   19-38     52-74  (132)
101 2jvf_A De novo protein M7; tet  20.5      37  0.0015   15.7   1.7   37   21-57     19-59  (96)
102 3i42_A Response regulator rece  20.2      34  0.0014   15.9   1.5   27   16-45      2-28  (127)

No 1  
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.06  E-value=3.1e-10  Score=75.59  Aligned_cols=46  Identities=24%  Similarity=0.320  Sum_probs=42.4

Q ss_pred             HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf             0028975999920045738899999999978997899999983068
Q gi|254780309|r   13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK   58 (59)
Q Consensus        13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~   58 (59)
                      .+++||+|+|||||++||.|+.++++.|++.||++|++++.+..++
T Consensus       268 GDVkGk~vIIVDDiIdTGgTl~~aa~~Lk~~GA~~V~~~~THgvfs  313 (379)
T 2ji4_A          268 GDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLS  313 (379)
T ss_dssp             SCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCC
T ss_pred             ECEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf             0120038999543433126699999999976998379999797688


No 2  
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.05  E-value=2.1e-10  Score=76.47  Aligned_cols=43  Identities=23%  Similarity=0.288  Sum_probs=39.5

Q ss_pred             HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             1002897599992004573889999999997899789999998
Q gi|254780309|r   12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      ..+++||+|+||||+++||+||.++++.|+++||++|++++..
T Consensus       115 ~~~v~Gk~ViLVDD~i~TG~Tm~aa~~~L~~~ga~~v~~a~pv  157 (208)
T 1wd5_A          115 KAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPV  157 (208)
T ss_dssp             CCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred             CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf             7455787899971513358999999999997699989999985


No 3  
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.04  E-value=3.1e-10  Score=75.55  Aligned_cols=52  Identities=12%  Similarity=0.153  Sum_probs=45.3

Q ss_pred             EEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             0882510210028975999920045738899999999978997899999983
Q gi|254780309|r    4 AFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         4 af~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      ...+..+...+++||+|||||||++||.|+.++.+.|++.||++|.+++|..
T Consensus       105 ~~~~~~~~~~~l~gk~VlIVDDIlDTG~TL~~~~~~l~~~g~~sv~~avLl~  156 (211)
T 1pzm_A          105 QVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLD  156 (211)
T ss_dssp             ---CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             EEEECCCCCHHHHHCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             1576157603332021589731133661699999999836999799999998


No 4  
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxantine-guanine phosphoribosyltransferase, 2-(N- morpholino)ethanesulfonic acid (MES); HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.02  E-value=5e-10  Score=74.41  Aligned_cols=53  Identities=23%  Similarity=0.328  Sum_probs=46.8

Q ss_pred             CEEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             60882510210028975999920045738899999999978997899999983
Q gi|254780309|r    3 NAFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         3 gaf~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      |...+..+...+++||+|||||||++||.|+.++.+.|.+.|++++..++|.-
T Consensus       102 ~~v~~~~~~~~~i~gk~VLlVDDIlDTG~Tl~~~~~~l~~~~p~sv~~avLl~  154 (204)
T 3hvu_A          102 GEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLD  154 (204)
T ss_dssp             CCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEE
T ss_pred             CCEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf             84688147885769998999702430749999999999964998168999999


No 5  
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=98.99  E-value=5.4e-10  Score=74.23  Aligned_cols=48  Identities=10%  Similarity=0.144  Sum_probs=42.9

Q ss_pred             CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             510210028975999920045738899999999978997899999983
Q gi|254780309|r    8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      ..+...+++||+|||||||++||.|+.++.+.|++.|+++|.+++|.-
T Consensus        94 ~~~~~~~l~gk~VLIVDDIlDTG~TL~~~~~~L~~~~p~sv~~avLl~  141 (220)
T 1tc1_A           94 LLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLD  141 (220)
T ss_dssp             EECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             CCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             046873425876799830420749999999999830999689999997


No 6  
>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B}
Probab=98.99  E-value=7.2e-10  Score=73.58  Aligned_cols=48  Identities=29%  Similarity=0.295  Sum_probs=43.2

Q ss_pred             HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf             210028975999920045738899999999978997899999983068
Q gi|254780309|r   11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK   58 (59)
Q Consensus        11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~   58 (59)
                      ...+++||+|+|||||++||.|+..+++.|++.||++|++++.+..+.
T Consensus       210 ~~gdv~gr~vIIVDDii~TGgTi~~aa~~Lk~~GA~~V~~~~THglfs  257 (319)
T 3dah_A          210 IIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLS  257 (319)
T ss_dssp             -----CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEEEEEECCC
T ss_pred             CCCCCCCCEEEEECCHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf             443437987897373440620199999999977998648997466448


No 7  
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii RH} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=98.99  E-value=9.5e-10  Score=72.93  Aligned_cols=49  Identities=22%  Similarity=0.233  Sum_probs=43.6

Q ss_pred             ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             2510210028975999920045738899999999978997899999983
Q gi|254780309|r    7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      +.......++||+|||||||++||.|+.++.+.|++.|+++|.+++|.-
T Consensus       132 ~~~~~~~~i~gk~VLIVDDIlDTG~TL~~~~~~L~~~~p~sv~~avLld  180 (233)
T 1fsg_A          132 VLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVE  180 (233)
T ss_dssp             EECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             ECCCCHHHHCCCEEEEECCEECHHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf             2368767755873799523332879999999999730888158999998


No 8  
>2h06_A Ribose-phosphate pyrophosphokinase I; PRS1, PRPP synthetase 1, phosphoribosyl pyrophosphate synthetase 1, transferase; 2.20A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h07_A 2h08_A
Probab=98.99  E-value=5.4e-10  Score=74.25  Aligned_cols=48  Identities=27%  Similarity=0.197  Sum_probs=43.5

Q ss_pred             HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf             210028975999920045738899999999978997899999983068
Q gi|254780309|r   11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK   58 (59)
Q Consensus        11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~   58 (59)
                      ...+++||+++|||||++||.|+..+++.|++.||++|++++.+..++
T Consensus       207 ~~gdV~gk~vIIVDDii~TGgTl~~aa~~Lk~~GA~~V~~~aTHglfs  254 (326)
T 2h06_A          207 LVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFS  254 (326)
T ss_dssp             EESCCTTEEEEEEEEEESSCHHHHHHHHHHHHTTEEEEEEEEEEECCC
T ss_pred             EECCCCCCEEEEECCHHHCHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf             621332440588641553326799999999857998656886434458


No 9  
>1cjb_A Protein (hypoxanthine-guanine phosphoribosyltransferase); malaria, purine salvage, transition state inhibitor; HET: IRP; 2.00A {Plasmodium falciparum} SCOP: c.61.1.1
Probab=98.99  E-value=6.1e-10  Score=73.95  Aligned_cols=49  Identities=24%  Similarity=0.219  Sum_probs=43.3

Q ss_pred             ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             2510210028975999920045738899999999978997899999983
Q gi|254780309|r    7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      +......+++||+|||||||++||.|+.++.+.|++.||++|.+++|.-
T Consensus       127 ~~~~~~~~i~gk~VLLVDDIlDTG~TL~~l~~~L~~~gpksv~vavLld  175 (231)
T 1cjb_A          127 IVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFI  175 (231)
T ss_dssp             EEESCGGGGBTCEEEEEEEEESSSHHHHHHHHHHGGGCBSEEEEEEEEE
T ss_pred             EECCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf             7247715454070799832100326999999999716999558884441


No 10 
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis MB4} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=98.98  E-value=9e-10  Score=73.06  Aligned_cols=53  Identities=15%  Similarity=0.225  Sum_probs=45.9

Q ss_pred             CEEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             60882510210028975999920045738899999999978997899999983
Q gi|254780309|r    3 NAFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         3 gaf~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      |...+..+...+++||+|||||||++||.|+.++.+.|++.|++++.+++|..
T Consensus       104 g~~~~~~~~~~~l~gk~VLlVDDIlDTG~TL~~~~~~l~~~~p~~i~~avL~d  156 (205)
T 1yfz_A          104 GIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILD  156 (205)
T ss_dssp             CCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             CCEEEECCCCCCCCCCEEEEEECEECHHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             85578157664778997999933223569999999999863998077999998


No 11 
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=98.97  E-value=5.1e-10  Score=74.39  Aligned_cols=47  Identities=32%  Similarity=0.328  Sum_probs=42.0

Q ss_pred             HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf             10028975999920045738899999999978997899999983068
Q gi|254780309|r   12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK   58 (59)
Q Consensus        12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~   58 (59)
                      ..+++||+|+|||||++||.|+.++++.|+++||++|++++.+....
T Consensus       212 ~gdV~gk~vIIVDDii~TGgTl~~aa~~Lk~~GA~~V~~~~THglfs  258 (317)
T 1dku_A          212 VGNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLS  258 (317)
T ss_dssp             ESCCTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSEECCC
T ss_pred             CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf             23547978998675001460199999999976997789996534348


No 12 
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=98.97  E-value=6.9e-10  Score=73.67  Aligned_cols=47  Identities=23%  Similarity=0.371  Sum_probs=42.1

Q ss_pred             HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             02100289759999200457388999999999789978999999830
Q gi|254780309|r   10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus        10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      +....++||+||||||+++||.|+.++.+.|++.||++|.+++|...
T Consensus        76 ~~~~~~~gk~VLiVDDv~~TG~Tl~~~~~~l~~~ga~~v~~avL~~k  122 (153)
T 1vdm_A           76 PIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMK  122 (153)
T ss_dssp             CCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEEC
T ss_pred             CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf             24323589989997253156847999999998659978999999998


No 13 
>2jbh_A HHGP; glycosyltransferase, PRTFDC1, transferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=98.96  E-value=1.1e-09  Score=72.56  Aligned_cols=46  Identities=22%  Similarity=0.281  Sum_probs=41.8

Q ss_pred             HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             0210028975999920045738899999999978997899999983
Q gi|254780309|r   10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      +...+++||+|||||||++||.|+.++.+.|++.||++|.+++|..
T Consensus       127 ~~~~~l~gk~VLlVDDIlDTG~TL~~~~~~L~~~~pksV~~avLl~  172 (225)
T 2jbh_A          127 DDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLV  172 (225)
T ss_dssp             SCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             CCHHHHHCCCEEEEECEECHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf             8745541050599712112316999999999646999899999998


No 14 
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis}
Probab=98.95  E-value=1.3e-09  Score=72.18  Aligned_cols=50  Identities=10%  Similarity=0.214  Sum_probs=43.7

Q ss_pred             EECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             82510210028975999920045738899999999978997899999983
Q gi|254780309|r    6 NVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         6 ~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      .+..+...+++||+|||||||++||.|+.++.+.|++.|++++.+++|.-
T Consensus        83 ~~~~~~~~~i~gk~VLlVDDVlDTG~TL~~~~~~l~~~~~~~v~~avL~~  132 (186)
T 3o7m_A           83 KLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLD  132 (186)
T ss_dssp             EEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             EECCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             16258875758988999942551147899999998744999189999999


No 15 
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=98.95  E-value=1.1e-09  Score=72.65  Aligned_cols=47  Identities=23%  Similarity=0.331  Sum_probs=42.6

Q ss_pred             HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf             10028975999920045738899999999978997899999983068
Q gi|254780309|r   12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK   58 (59)
Q Consensus        12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~   58 (59)
                      ..+++||+|+||||+++||.|+.++++.|++.||++|+.++.+...+
T Consensus       200 ~gdv~g~~viIvDDii~tGgTl~~aa~~Lk~~GA~~V~~~~THgifs  246 (284)
T 1u9y_A          200 TLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLI  246 (284)
T ss_dssp             SCCCTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCC
T ss_pred             CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf             34556653799745454267799999999866998699999797388


No 16 
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=98.94  E-value=1.3e-09  Score=72.21  Aligned_cols=46  Identities=15%  Similarity=0.262  Sum_probs=41.7

Q ss_pred             HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             0210028975999920045738899999999978997899999983
Q gi|254780309|r   10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      ....+++||+|||||||++||.|+.++.+.|++.|++++..++|..
T Consensus       119 ~~~~~l~gk~VLiVDDIlDTG~TL~~~~~~l~~~~p~sv~~~~Ll~  164 (217)
T 1z7g_A          119 DDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLV  164 (217)
T ss_dssp             SCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             CCHHHHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf             8704165366899604200628999999998476989699999998


No 17 
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=98.93  E-value=1.6e-09  Score=71.65  Aligned_cols=50  Identities=16%  Similarity=0.240  Sum_probs=44.1

Q ss_pred             EECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             82510210028975999920045738899999999978997899999983
Q gi|254780309|r    6 NVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         6 ~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      .+..+...+++||+|||||||++||.|+.++.+.|.+.|++++.+++|..
T Consensus        87 ~~~~~~~~~i~gk~VLlVDDVldTG~TL~~~~~~l~~~~~~si~~~vL~~  136 (185)
T 2geb_A           87 KIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILD  136 (185)
T ss_dssp             EEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             EEECCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             88156752789998999950544379999999999863998589978998


No 18 
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=98.92  E-value=1.3e-09  Score=72.25  Aligned_cols=49  Identities=20%  Similarity=0.319  Sum_probs=43.3

Q ss_pred             ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             2510210028975999920045738899999999978997899999983
Q gi|254780309|r    7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      +..+...+++||+|||||||++||.|+.++.+.|++.||++|.+++|.-
T Consensus        81 ~~~~~~~~~~gk~VLiVDDI~dTG~Tl~~~~~~l~~~~p~~v~~avL~d  129 (177)
T 3ohp_A           81 ILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLD  129 (177)
T ss_dssp             EEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             EECCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             8448875668997999940774579999999999858998899999998


No 19 
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=98.90  E-value=1.7e-09  Score=71.57  Aligned_cols=49  Identities=14%  Similarity=0.233  Sum_probs=43.7

Q ss_pred             ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             2510210028975999920045738899999999978997899999983
Q gi|254780309|r    7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      +..+...+++||+|||||||++||.|+.++.+.|++.+|++|.+++|.-
T Consensus        85 ~~~~~~~~~~gk~VliVDDVlDTG~TL~~~~~~l~~~~p~~i~~avL~d  133 (181)
T 2ywu_A           85 LLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLS  133 (181)
T ss_dssp             EEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             ECCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             6157986878980799988872755299999999836998899999997


No 20 
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=98.89  E-value=2.1e-09  Score=71.08  Aligned_cols=50  Identities=16%  Similarity=0.313  Sum_probs=44.2

Q ss_pred             EECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             82510210028975999920045738899999999978997899999983
Q gi|254780309|r    6 NVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         6 ~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      .+..+....++||+|||||||++||.|+.++.+.|++.||++|.++||.-
T Consensus        84 ~~~~~~~~~~~gk~VLlVDDI~dtG~Tl~~~~~~l~~~~p~si~~avL~d  133 (183)
T 1hgx_A           84 TISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCD  133 (183)
T ss_dssp             EEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred             EEECCCCCHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf             03126640003533213542365655699999999738997899999997


No 21 
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding protein, pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=98.88  E-value=2.6e-09  Score=70.53  Aligned_cols=46  Identities=22%  Similarity=0.359  Sum_probs=40.4

Q ss_pred             HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHC-CCCEEEEEEEEE
Q ss_conf             0210028975999920045738899999999978-997899999983
Q gi|254780309|r   10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKA-GAMTVSILTFSR   55 (59)
Q Consensus        10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~-ga~~V~~~~lar   55 (59)
                      +...+++||+|||||||++||.||.++.+.|++. +|+++.+++|..
T Consensus        91 d~~~~l~gk~VliVDDIlDTG~TL~~~~~~l~~~~~~~~v~~avL~d  137 (181)
T 1a3c_A           91 DIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVD  137 (181)
T ss_dssp             ECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred             CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf             57621259789999400112189999999997438986899999982


No 22 
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.87  E-value=4.3e-09  Score=69.41  Aligned_cols=45  Identities=22%  Similarity=0.403  Sum_probs=39.9

Q ss_pred             HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             100289759999200457388999999999789978999999830
Q gi|254780309|r   12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus        12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      ...++|++|+||||++|||+|+.++++.|+++|++.+.++++...
T Consensus       115 ~~~~~G~rVllVDDvitTG~Tl~a~~~~l~~aGa~vv~v~~i~~~  159 (175)
T 1vch_A          115 AEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQ  159 (175)
T ss_dssp             HHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred             HHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEEEE
T ss_conf             011289889999844166888999999999869979999999960


No 23 
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.84  E-value=4.7e-09  Score=69.20  Aligned_cols=50  Identities=28%  Similarity=0.351  Sum_probs=41.7

Q ss_pred             ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC-CCEEEEEEEEEE
Q ss_conf             25102100289759999200457388999999999789-978999999830
Q gi|254780309|r    7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAG-AMTVSILTFSRS   56 (59)
Q Consensus         7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~g-a~~V~~~~lar~   56 (59)
                      +......+++||+|||||||++||.||.++.+.|.+.| ++.+.+++|...
T Consensus        86 ~~~~~~~~l~gk~VLIVDDIlDTG~TL~~~~~~l~~~g~~~~v~~avL~kk  136 (181)
T 1ufr_A           86 RETRIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDR  136 (181)
T ss_dssp             EEEEECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEEC
T ss_pred             ECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECC
T ss_conf             135677665685699984202656069999999987399956999999738


No 24 
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=98.70  E-value=1.2e-09  Score=72.32  Aligned_cols=51  Identities=14%  Similarity=0.115  Sum_probs=42.6

Q ss_pred             CEEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf             608825102100289759999200457388999999999789978999999
Q gi|254780309|r    3 NAFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTF   53 (59)
Q Consensus         3 gaf~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~l   53 (59)
                      |...+..+...+++||+|||||||++||.|+.++.+.|++.|++++.++++
T Consensus       104 g~v~i~~~l~~~i~gk~VLIVDDIiDTG~TL~~l~~~L~~~~~~Sv~v~~l  154 (230)
T 1dqn_A          104 SVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKHAKICSCFVKDV  154 (230)
T ss_dssp             EEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTTCEEEEEEESCH
T ss_pred             CEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf             422562276412389748997436717446999998775089868999540


No 25 
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=98.69  E-value=2.4e-08  Score=65.33  Aligned_cols=45  Identities=20%  Similarity=0.326  Sum_probs=39.0

Q ss_pred             HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH-CCCCEEEEEEEEE
Q ss_conf             21002897599992004573889999999997-8997899999983
Q gi|254780309|r   11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKK-AGAMTVSILTFSR   55 (59)
Q Consensus        11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~-~ga~~V~~~~lar   55 (59)
                      ...+++||+|||||||++||.|+.++.+.+.+ .+|++|.+++|..
T Consensus       106 ~~~~l~gk~VLlVDDIlDTG~TL~~~~~~ll~~~~p~~V~~avLvd  151 (201)
T 1w30_A          106 PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVD  151 (201)
T ss_dssp             CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred             CCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf             6746579789999402256768999999998528986899999992


No 26 
>2jky_A Hypoxanthine-guanine phosphoribosyltransferase; nucleus, cytoplasm, magnesium, GMP complex, FLIP peptide-plane, glycosyltransferase; HET: 5GP; 2.3A {Saccharomyces cerevisiae} PDB: 2jkz_A*
Probab=98.59  E-value=1.4e-09  Score=71.98  Aligned_cols=39  Identities=26%  Similarity=0.332  Sum_probs=34.0

Q ss_pred             HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             210028975999920045738899999999978997899
Q gi|254780309|r   11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS   49 (59)
Q Consensus        11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~   49 (59)
                      ...+++||+||||||+++||.||.++.+.|++.|+++|.
T Consensus        96 ~~~~l~gk~VLIVDDi~dTG~Tl~~~~~~L~~~g~~~v~  134 (213)
T 2jky_A           96 CKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAK  134 (213)
T ss_dssp             CCCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHEE
T ss_conf             654668987999954203028999999999853945415


No 27 
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=98.55  E-value=9.6e-08  Score=62.10  Aligned_cols=40  Identities=23%  Similarity=0.326  Sum_probs=37.7

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .+|++|+||||+++||.|+.++.+.++++|++.+.++++.
T Consensus       120 ~~G~rVlIVDDvi~TGgT~~a~~~ll~~~Ga~Vv~~~vli  159 (187)
T 1g2q_A          120 PAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVM  159 (187)
T ss_dssp             CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             6786799983004037699999999998799899999999


No 28 
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransferase; purine biosynthesis, glycosyltransferase, glutamine amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=98.53  E-value=7.2e-08  Score=62.77  Aligned_cols=48  Identities=21%  Similarity=0.302  Sum_probs=42.6

Q ss_pred             HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf             210028975999920045738899999999978997899999983068
Q gi|254780309|r   11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK   58 (59)
Q Consensus        11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~   58 (59)
                      .+..++||+|+||||.|.+|+|+..+++.|+++||++|++..-+..++
T Consensus       353 ~~~~i~gk~ivlvDDSIVRGtT~k~ii~~Lr~aGakeIhvri~sPpi~  400 (504)
T 1ecf_A          353 NRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIR  400 (504)
T ss_dssp             CGGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCCCC
T ss_pred             CHHHEECCCEEEEECCHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             342131362799753010264199999999976998899997789857


No 29 
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=98.47  E-value=2.1e-07  Score=60.28  Aligned_cols=40  Identities=30%  Similarity=0.456  Sum_probs=37.4

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .+|++|+||||+++||.|+.++.+.+++.|+..+.++++.
T Consensus       136 ~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~~ii  175 (236)
T 1qb7_A          136 GKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSIL  175 (236)
T ss_dssp             CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             5696799996016356699999999998799899999999


No 30 
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=98.46  E-value=1.5e-07  Score=61.01  Aligned_cols=47  Identities=28%  Similarity=0.442  Sum_probs=42.1

Q ss_pred             HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf             21002897599992004573889999999997899789999998306
Q gi|254780309|r   11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL   57 (59)
Q Consensus        11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~   57 (59)
                      .+..++||.|+||||.+-+|+|+..+++.|+++||++|++..-+..+
T Consensus       332 ~~~~i~gk~vvlvDDSIVRGtT~k~iv~~lr~~Gakevh~~~~sPpi  378 (459)
T 1ao0_A          332 VRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPI  378 (459)
T ss_dssp             CHHHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSCCC
T ss_pred             HHHHHCCCCEEEEECCEECCCHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             48774467069995321013028999999974799889999788973


No 31 
>2p1z_A Phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.44A {Corynebacterium diphtheriae NCTC13129}
Probab=98.45  E-value=2.1e-07  Score=60.28  Aligned_cols=40  Identities=40%  Similarity=0.556  Sum_probs=37.8

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .+|++|+||||++|||.|+.++++.+++.|+..+.++++.
T Consensus       112 ~~g~rVlIVDDviTTG~S~~~~i~~l~~~G~~V~~v~viv  151 (180)
T 2p1z_A          112 VVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVV  151 (180)
T ss_dssp             CTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEE
T ss_pred             CCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             5897689997523037519999999998899799999999


No 32 
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, structural genomics, PSI, protein structure initative; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=98.45  E-value=4e-07  Score=58.73  Aligned_cols=41  Identities=27%  Similarity=0.304  Sum_probs=38.0

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             28975999920045738899999999978997899999983
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      -+|++|+||||+++||.|+.++.+.++++|++-+.++++.-
T Consensus       118 ~~g~rVlIVDDvitTG~T~~~~i~ll~~~Ga~vvgv~vlvd  158 (197)
T 1y0b_A          118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIE  158 (197)
T ss_dssp             CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred             CCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_conf             69979999720213283699999999987998999999998


No 33 
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=98.42  E-value=2.2e-07  Score=60.20  Aligned_cols=40  Identities=25%  Similarity=0.358  Sum_probs=37.1

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .+|++|+||||++|||.|+.++++.+++.|+..+.++++-
T Consensus       109 ~~g~~VlIVDDvitTG~T~~~ai~~l~~~G~~v~~v~viv  148 (205)
T 2wns_A          109 NPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLL  148 (205)
T ss_dssp             CTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEE
T ss_pred             CCCCEEEEEEEEHHCCCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             6664599996102127067989999986898899999999


No 34 
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=98.42  E-value=3.6e-07  Score=58.99  Aligned_cols=42  Identities=24%  Similarity=0.275  Sum_probs=38.1

Q ss_pred             CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             028975999920045738899999999978997899999983
Q gi|254780309|r   14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        14 ~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      -.+|++||||||+++||.|+.++++.++++||+.+.+.++.-
T Consensus       193 l~~g~rVLIVDDvi~tG~T~~~~i~llre~GA~vvgi~VlVd  234 (291)
T 1o57_A          193 MKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVE  234 (291)
T ss_dssp             SCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEE
T ss_pred             CCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_conf             578856998424233277899999999987997999999998


No 35 
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=98.40  E-value=4.1e-07  Score=58.67  Aligned_cols=42  Identities=21%  Similarity=0.283  Sum_probs=38.1

Q ss_pred             HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             002897599992004573889999999997899789999998
Q gi|254780309|r   13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      ....|++|+||||++|||.|+.++++.+++.|+..+.++++.
T Consensus       102 g~~~g~~VlIVDDvitTG~S~~~~i~~l~~~G~~v~~v~vlv  143 (178)
T 2yzk_A          102 GDPPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLV  143 (178)
T ss_dssp             TCCCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             EECCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             524895799997447357468999999998899799999999


No 36 
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=98.40  E-value=4.2e-07  Score=58.61  Aligned_cols=40  Identities=28%  Similarity=0.326  Sum_probs=37.6

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .+|++|+||||++|||.|+.++++.|++.|+..+.++++.
T Consensus       123 ~~G~~VlIVDDViTTG~S~~eai~~l~~~G~~V~~~~viv  162 (226)
T 2ps1_A          123 LENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIAL  162 (226)
T ss_dssp             CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             7797079986103568458999999998799899999999


No 37 
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, polymorphism, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=98.38  E-value=4.7e-07  Score=58.38  Aligned_cols=40  Identities=23%  Similarity=0.405  Sum_probs=37.5

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      -+|.+|+||||+++||.|+.++.+.+++.|+..+.++++.
T Consensus       118 ~~g~rVlIVDDvlaTGgT~~a~~~ll~~~Ga~vvg~~~ii  157 (180)
T 1zn8_A          118 EPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLV  157 (180)
T ss_dssp             CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCEEEEEEHHHHHCCHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             5898899995463408189999999998799899999999


No 38 
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=98.37  E-value=5.3e-07  Score=58.08  Aligned_cols=40  Identities=28%  Similarity=0.501  Sum_probs=37.0

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      -+|++|+||||++|||.|+.++++.++++|+..+.++++.
T Consensus       135 ~~G~~VlIVDDViTTG~Si~~ai~~lr~~G~~V~~v~viv  174 (234)
T 3m3h_A          135 EKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIF  174 (234)
T ss_dssp             CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             5795599985300347227999999997899799999999


No 39 
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=98.36  E-value=5.7e-07  Score=57.92  Aligned_cols=39  Identities=23%  Similarity=0.411  Sum_probs=36.9

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             897599992004573889999999997899789999998
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      +|.+||||||+++||.|+.++.+.++++|++.+.++++.
T Consensus       125 ~G~rVlIVDDvlaTGgT~~a~~~ll~~~Ga~Vvg~~vii  163 (190)
T 2dy0_A          125 PGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFII  163 (190)
T ss_dssp             TTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCEEEEEHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             998799982441317489999999998699899999999


No 40 
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=98.36  E-value=5.2e-07  Score=58.13  Aligned_cols=40  Identities=30%  Similarity=0.295  Sum_probs=37.6

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .+|++|+||||++|||.|+.++++.|++.|+..+.++++.
T Consensus       134 ~~g~~VlIVDDViTTG~S~~~ai~~l~~~G~~V~~v~viv  173 (232)
T 3mjd_A          134 MTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSI  173 (232)
T ss_dssp             CTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEE
T ss_pred             CCCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             6655158983103568578999999998699799999999


No 41 
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, catalytic loop; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=98.30  E-value=7.1e-07  Score=57.42  Aligned_cols=39  Identities=31%  Similarity=0.267  Sum_probs=34.0

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCE--EEEEEE
Q ss_conf             289759999200457388999999999789978--999999
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMT--VSILTF   53 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~--V~~~~l   53 (59)
                      -+|++||||||+++||.|+.++.+.+++.|++.  |.++++
T Consensus       115 ~~G~rVLIVDDvl~TGgT~~a~~~ll~~~Ga~v~~v~v~vv  155 (186)
T 1l1q_A          115 GPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVL  155 (186)
T ss_dssp             CTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred             CCCCEEEEEEEHHHHCHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             78998999953433164899999999987994789999999


No 42 
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=98.30  E-value=9.5e-07  Score=56.72  Aligned_cols=40  Identities=25%  Similarity=0.449  Sum_probs=36.8

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      -+|++|+||||++|||.++.++++.|++.|+..+.++++-
T Consensus       147 ~~g~rVlIVEDViTTGgSileai~~l~~~G~~V~~v~viv  186 (243)
T 3dez_A          147 TKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIF  186 (243)
T ss_dssp             CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             9999899985114567445899999998799799999999


No 43 
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, protein structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=98.24  E-value=1.6e-06  Score=55.48  Aligned_cols=40  Identities=28%  Similarity=0.472  Sum_probs=37.2

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             2897599992004573889999999997899789999998
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .+|++|+||||++|||.|+.++++.+++.|+..+.++++.
T Consensus       115 ~~g~~VliVEDViTTG~S~~~ai~~l~~~g~~V~~~~viv  154 (211)
T 2aee_A          115 LKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIF  154 (211)
T ss_dssp             CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             7999899985304567215765446887498066999999


No 44 
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=98.20  E-value=2.3e-06  Score=54.63  Aligned_cols=39  Identities=21%  Similarity=0.273  Sum_probs=35.8

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             897599992004573889999999997899789999998
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .+.+|+||||++|||.|+.++++.|++.|+..+.++|+.
T Consensus       141 ~~grVlIVDDViTTG~Si~~ai~~l~~~G~~V~~v~viv  179 (238)
T 3n2l_A          141 LEGRVMLVDDVITAGTAIRESMELIQANKADLAGVLVAI  179 (238)
T ss_dssp             CCSEEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf             777679997651668458999999998799489999986


No 45 
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=98.06  E-value=4.7e-06  Score=52.97  Aligned_cols=40  Identities=23%  Similarity=0.334  Sum_probs=36.0

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             8975999920045738899999999978997899999983
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      .+.+|+||||++|||.|..++++.|++.|+..+.++|+.-
T Consensus       116 ~~~rVliVeDViTTG~S~~e~i~~l~~~G~~V~~v~vivD  155 (213)
T 1lh0_A          116 LQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLD  155 (213)
T ss_dssp             CCSEEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_conf             7784899972314256589999999987997999999987


No 46 
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzyme; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=98.02  E-value=1.4e-06  Score=55.80  Aligned_cols=37  Identities=27%  Similarity=0.302  Sum_probs=30.0

Q ss_pred             HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             002897599992004573889999999997899789999998
Q gi|254780309|r   13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      ..+.||+|||||||++||.|+.++.+.|++     ++.++|.
T Consensus        77 ~~~~gk~VLiVDDI~DtG~Tl~~i~~~l~~-----~~~a~l~  113 (152)
T 1nul_A           77 AEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIF  113 (152)
T ss_dssp             CSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEE
T ss_pred             CCCCCCCEEEEEECCCCHHHHHHHHHHCCC-----CEEEEEE
T ss_conf             046897269995031541899999986677-----6699999


No 47 
>2ehj_A Uracil phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Escherichia coli}
Probab=97.94  E-value=2.2e-05  Score=49.33  Aligned_cols=49  Identities=22%  Similarity=0.333  Sum_probs=43.1

Q ss_pred             CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             5102100289759999200457388999999999789978999999830
Q gi|254780309|r    8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus         8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      ...+++++.+++|+|+|.++.||.|+..+.+.|+++|+++|.++++-.+
T Consensus       114 ~~klP~~~~~~~villDPmlATG~s~~~ai~~L~~~G~~~I~iv~~ias  162 (208)
T 2ehj_A          114 FQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAA  162 (208)
T ss_dssp             EEECCSCGGGCEEEEEEEEESSCHHHHHHHHHHHHTTCCEEEEEEEEEC
T ss_pred             EEECCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf             9861445666769996836745677999999998579982899999855


No 48 
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomics, JCSG, PSI, protein structure initiative; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=97.89  E-value=1.3e-05  Score=50.50  Aligned_cols=49  Identities=18%  Similarity=0.276  Sum_probs=42.6

Q ss_pred             CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             5102100289759999200457388999999999789978999999830
Q gi|254780309|r    8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus         8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      ...+++++.+++|+|+|.++.||.|+..+.+.|++.|+++|.++++--+
T Consensus       127 y~klP~~~~~~~VillDPmlATG~s~~~ai~~L~~~G~~~I~~v~~ias  175 (221)
T 1o5o_A          127 YAKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVALIAA  175 (221)
T ss_dssp             EEECCCCCTTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEECSEEC
T ss_pred             EEECCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf             0107866346728987788647712999999998659970899998855


No 49 
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=97.78  E-value=2.6e-05  Score=48.92  Aligned_cols=49  Identities=24%  Similarity=0.351  Sum_probs=42.7

Q ss_pred             CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             5102100289759999200457388999999999789978999999830
Q gi|254780309|r    8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus         8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      ...++.++++++|+|.|.++.||.|+..+.+.|++.|+++|.++++--+
T Consensus       115 y~kLP~~i~~~~villDPmlATG~s~~~ai~~L~~~G~~~I~~vs~ias  163 (209)
T 1i5e_A          115 YVKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCLIAA  163 (209)
T ss_dssp             EEECCTTTTTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEECSEEC
T ss_pred             EEECCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf             2435865103868975868864777999999999669985799998507


No 50 
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics; 2.10A {Thermus thermophilus HB8} SCOP: c.61.1.1
Probab=97.78  E-value=1.8e-05  Score=49.82  Aligned_cols=48  Identities=25%  Similarity=0.362  Sum_probs=42.5

Q ss_pred             CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             102100289759999200457388999999999789978999999830
Q gi|254780309|r    9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus         9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      ..+++++.+++|+|+|.++.||.|+..+.+.|++.|++++.++++-.+
T Consensus       115 ~klP~~i~~~~vil~DPmlATG~s~~~ai~~Lk~~g~~~I~~v~~ias  162 (208)
T 1v9s_A          115 IKLPPDIAERRAFLLDPMLATGGSASLALSLLKERGATGVKLMAILAA  162 (208)
T ss_dssp             EECCSCGGGSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred             EECCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf             973765135779996836634377999999998659984699999527


No 51 
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=97.50  E-value=0.00011  Score=45.64  Aligned_cols=49  Identities=12%  Similarity=0.180  Sum_probs=40.4

Q ss_pred             ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC--EEEEEEEEE
Q ss_conf             2510210028975999920045738899999999978997--899999983
Q gi|254780309|r    7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAM--TVSILTFSR   55 (59)
Q Consensus         7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~--~V~~~~lar   55 (59)
                      ....+++++.++.|+|+|.++.||.|+..+.+.|++.|++  ++.++++-.
T Consensus       146 yy~klP~~i~~~~Vll~DPMLATG~S~~~ai~~L~~~Gv~~~~I~~vsvia  196 (243)
T 1bd3_D          146 IYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILA  196 (243)
T ss_dssp             EEEECCTTGGGSEEEEECSEESSCHHHHHHHHHHHHHTCCGGGEEEEEEEE
T ss_pred             EHHHCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEEE
T ss_conf             142284211014589868055057229999999997199854079999986


No 52 
>2e55_A Uracil phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.15A {Aquifex aeolicus}
Probab=97.46  E-value=0.00017  Score=44.57  Aligned_cols=44  Identities=18%  Similarity=0.286  Sum_probs=40.0

Q ss_pred             HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             00289759999200457388999999999789978999999830
Q gi|254780309|r   13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus        13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      +++.++.|+|+|.++.||.|+..+.+.|++.|+++|.++++--+
T Consensus       117 P~~~~~~vlllDPmlATG~s~~~ai~~L~~~g~~~I~~v~~iaa  160 (208)
T 2e55_A          117 PELKGKIVVILDPMLATGGTLEVALREILKHSPLKVKSVHAIAA  160 (208)
T ss_dssp             CCCBTSEEEEECSEESSSHHHHHHHHHHHTTCBSEEEEEEEEEC
T ss_pred             HHHCCCCEEEECHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf             53035706983467615715999999998448861799999825


No 53 
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei}
Probab=97.32  E-value=0.00013  Score=45.21  Aligned_cols=44  Identities=23%  Similarity=0.262  Sum_probs=37.8

Q ss_pred             HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC--CEEEEEEEEE
Q ss_conf             1002897599992004573889999999997899--7899999983
Q gi|254780309|r   12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGA--MTVSILTFSR   55 (59)
Q Consensus        12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga--~~V~~~~lar   55 (59)
                      .+++++++|+|+|.++.||.|+..+.+.|+++|+  ++|.++++--
T Consensus       124 ~p~~~~~~villDPmlATG~s~~~ai~~L~~~Gv~~~~I~~v~~ia  169 (217)
T 3dmp_A          124 LPDLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVA  169 (217)
T ss_dssp             CCCCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECSEE
T ss_pred             CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEE
T ss_conf             8773446099994402577579999999998499845289999875


No 54 
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=97.03  E-value=0.00057  Score=41.70  Aligned_cols=41  Identities=17%  Similarity=0.150  Sum_probs=36.5

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             89759999200457388999999999789978999999830
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      +.++|++.|.++.||.|+..+.+.|++.|+++|.++++--+
T Consensus       132 ~~~~villDPmlATG~s~~~ai~~L~~~g~~~I~~v~~ias  172 (216)
T 1xtt_A          132 KVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISS  172 (216)
T ss_dssp             TTCEEEEECSEESSSHHHHHHHHHHGGGCCSEEEEECSEEE
T ss_pred             CCCEEEEECHHHHCHHHHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf             45338972747754188999999987459953899999946


No 55 
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=78.13  E-value=2.9  Score=21.69  Aligned_cols=32  Identities=25%  Similarity=0.417  Sum_probs=24.0

Q ss_pred             HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCE
Q ss_conf             00289759999200457388999999999789978
Q gi|254780309|r   13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMT   47 (59)
Q Consensus        13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~   47 (59)
                      ++++|++||+|||-   -.......+.|+..|...
T Consensus         3 ~~~~g~rILvVDD~---~~~~~~l~~~L~~~g~~v   34 (136)
T 1dcf_A            3 SNFTGLKVLVMDEN---GVSRMVTKGLLVHLGCEV   34 (136)
T ss_dssp             CCCTTCEEEEECSC---HHHHHHHHHHHHHTTCEE
T ss_pred             CCCCCCEEEEEECC---HHHHHHHHHHHHHCCCEE
T ss_conf             98999999999398---999999999999879999


No 56 
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=59.25  E-value=11  Score=18.57  Aligned_cols=31  Identities=26%  Similarity=0.322  Sum_probs=21.4

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf             2897599992004573889999999997899789
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV   48 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V   48 (59)
                      +.||+||||||--+.   .......|.+.|....
T Consensus         5 l~g~kILiVDD~~~~---r~~l~~~L~~~g~~v~   35 (130)
T 3eod_A            5 LVGKQILIVEDEQVF---RSLLDSWFSSLGATTV   35 (130)
T ss_dssp             TTTCEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred             CCCCEEEEEECCHHH---HHHHHHHHHHCCCEEE
T ss_conf             899989999698999---9999999998899999


No 57 
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=50.92  E-value=14  Score=18.03  Aligned_cols=34  Identities=21%  Similarity=0.156  Sum_probs=28.5

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             2897599992004573889999999997899789999
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      -++++|++++   .+|.....+++.|++.|-+.|+.+
T Consensus        56 ~~~~~ii~~c---~~g~~s~~~a~~l~~~G~~~v~~l   89 (108)
T 1gmx_A           56 DFDTPVMVMC---YHGNSSKGAAQYLLQQGYDVVYSI   89 (108)
T ss_dssp             CTTSCEEEEC---SSSSHHHHHHHHHHHHTCSSEEEE
T ss_pred             HCCCCEEEEC---CCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             2468704788---998589999999998499577985


No 58 
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=45.19  E-value=13  Score=18.11  Aligned_cols=34  Identities=18%  Similarity=0.295  Sum_probs=25.9

Q ss_pred             CCCEEEE--EE-----ECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             8975999--92-----0045738899999999978997899
Q gi|254780309|r   16 AGLKILL--ID-----DVYTTGATAKCAAIALKKAGAMTVS   49 (59)
Q Consensus        16 ~gk~vli--VD-----DiitTG~T~~~~~~~L~~~ga~~V~   49 (59)
                      .||.+++  ||     +-...|.|+.+.++.|++.|+..-.
T Consensus       197 dGk~l~lvvvDGR~~~~~~s~GlTl~Ela~~l~~lG~~~Al  237 (285)
T 3ohg_A          197 DRKTMYVFVVDGRRKDSFFALGLTLPHLATMMKAVGCYNAI  237 (285)
T ss_dssp             TSSEEEEEEECCSCCSTTCCCCBCHHHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf             99999999984865787767887999999999975975489


No 59 
>2pkp_A Homoaconitase small subunit; beta barrel, amino-acid biosynthesis, leucine biosynthesis, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=44.84  E-value=7.1  Score=19.58  Aligned_cols=48  Identities=23%  Similarity=0.362  Sum_probs=40.1

Q ss_pred             CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             510210028975999920045738899999999978997899999983
Q gi|254780309|r    8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      .++....++.-+||+.++-+=+|++=.+++..|+..|.+.|..-.++|
T Consensus        42 ~~~f~~~~~~g~IlVaG~NFG~GSSRE~A~~al~~~Gi~aVIA~SFa~   89 (170)
T 2pkp_A           42 DENFPKKVKEGDVIVAGENFGCGSSREQAVIAIKYCGIKAVIAKSFAR   89 (170)
T ss_dssp             CTTHHHHCCTTCEEEECTTBTBSSCCHHHHHHHHTTTCCEEEESCBCH
T ss_pred             CCHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHH
T ss_conf             731343257888899668613898865888999993997999805899


No 60 
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=43.02  E-value=19  Score=17.32  Aligned_cols=29  Identities=34%  Similarity=0.361  Sum_probs=14.3

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf             28975999920045738899999999978997
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAM   46 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~   46 (59)
                      ++||.||||||--+.   ...+...|...|..
T Consensus         3 lk~~rILiVDD~~~~---~~~l~~~L~~~g~~   31 (140)
T 3h5i_A            3 LKDKKILIVEDSKFQ---AKTIANILNKYGYT   31 (140)
T ss_dssp             ---CEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred             CCCCEEEEEECCHHH---HHHHHHHHHHCCCE
T ss_conf             899999999598999---99999999987999


No 61 
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=42.53  E-value=21  Score=17.06  Aligned_cols=41  Identities=17%  Similarity=0.096  Sum_probs=32.7

Q ss_pred             C-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             2-8975999920045738899999999978997899999983
Q gi|254780309|r   15 V-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        15 i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      | .|-.|+-|++.-..|.|..++.+.|+.......--+.+.|
T Consensus        68 l~~GD~Il~INg~~v~~~~~~ev~~~lk~~~~g~~v~L~v~R  109 (126)
T 1wif_A           68 LQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYR  109 (126)
T ss_dssp             SCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEES
T ss_pred             CCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf             998999999999997899899999999679999989999994


No 62 
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=42.19  E-value=21  Score=17.03  Aligned_cols=33  Identities=24%  Similarity=0.184  Sum_probs=27.6

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             897599992004573889999999997899789999
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      ++++|++++   .+|.....++..|++.|-+.|+.+
T Consensus        55 ~~~~ivvyC---~~g~rs~~aa~~L~~~G~~~V~~l   87 (141)
T 3ilm_A           55 KSRDIYVYG---AGDEQTSQAVNLLRSAGFEHVSEL   87 (141)
T ss_dssp             TTSEEEEEC---SSHHHHHHHHHHHHHTTCCSEEEC
T ss_pred             CCCCEEEEC---CCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             888679989---997589999999997497477995


No 63 
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consortium, SGC, cytoplasm, polymorphism, protein binding; 2.60A {Homo sapiens}
Probab=41.90  E-value=21  Score=17.00  Aligned_cols=43  Identities=19%  Similarity=0.068  Sum_probs=35.7

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf             8975999920045738899999999978997899999983068
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK   58 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~   58 (59)
                      .|-.|+=|++.-.+|.|..++.+.|++........+.+.+..+
T Consensus        49 ~GD~Il~VNg~~v~~~t~~ev~~~Lk~~~~~~~~~l~l~~p~k   91 (95)
T 3gge_A           49 VGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKK   91 (95)
T ss_dssp             TTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEECS
T ss_pred             CCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
T ss_conf             9999999999998899799999999769999789999937886


No 64 
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=41.43  E-value=22  Score=16.96  Aligned_cols=45  Identities=13%  Similarity=0.192  Sum_probs=34.7

Q ss_pred             CCC-CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf             028-975999920045738899999999978997899999983068
Q gi|254780309|r   14 HVA-GLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK   58 (59)
Q Consensus        14 ~i~-gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~   58 (59)
                      .++ |-.|+=|++.-.+|.|..++.+.|++........+.+.|..|
T Consensus        55 ~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~~~v~l~v~~~pP  100 (101)
T 2yt7_A           55 ALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHCPP  100 (101)
T ss_dssp             SCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCCCC
T ss_pred             CCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
T ss_conf             9987999999999998899899999999749999989999983899


No 65 
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis F11}
Probab=40.12  E-value=23  Score=16.85  Aligned_cols=33  Identities=15%  Similarity=0.150  Sum_probs=28.1

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             897599992004573889999999997899789999
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      ++++|++++   .+|.....++..|.+.|-++|+.+
T Consensus        79 ~~~~Iiv~C---~~G~rS~~aa~~L~~~Gf~~v~~l  111 (148)
T 2fsx_A           79 HERPVIFLC---RSGNRSIGAAEVATEAGITPAYNV  111 (148)
T ss_dssp             --CCEEEEC---SSSSTHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCEEEEEC---CCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             998699988---998799999999998497457994


No 66 
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=38.89  E-value=24  Score=16.74  Aligned_cols=41  Identities=17%  Similarity=0.187  Sum_probs=33.8

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             89759999200457388999999999789978999999830
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      .|-.|+=|+..-..|.|..++.+.|++.+......+.++|-
T Consensus        79 ~GD~Il~VNG~~v~~~t~~ea~~lL~~~~~~~~v~L~V~R~  119 (121)
T 2kom_A           79 AGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQ  119 (121)
T ss_dssp             SSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEEC
T ss_pred             CCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEECC
T ss_conf             89999999999978998999999997189989899999779


No 67 
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=38.41  E-value=24  Score=16.70  Aligned_cols=41  Identities=22%  Similarity=0.042  Sum_probs=34.4

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             28975999920045738899999999978997899999983
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      -.|-.|+=|++.-..|.|..++.+.|+..+...|.+-++.+
T Consensus        63 ~~GD~Il~INg~~v~~~t~~evv~~lr~~~~~~v~L~Vv~~  103 (109)
T 2vsv_A           63 REGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSL  103 (109)
T ss_dssp             CTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESC
T ss_pred             CCCCEEEEECCEECCCCCHHHHHHHHHCCCCCEEEEEEECC
T ss_conf             99999999999998999899999998778997489999787


No 68 
>1vr0_A Probable 2-phosphosulfolactate phosphatase; 15026306, putative 2-phosphosulfolactate phosphatase, structural genomics; HET: 3SL; 2.49A {Clostridium acetobutylicum} SCOP: c.148.1.1
Probab=38.03  E-value=25  Score=16.66  Aligned_cols=35  Identities=14%  Similarity=0.192  Sum_probs=25.6

Q ss_pred             HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             1002897599992004573889999999997899789999
Q gi|254780309|r   12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      ..+++|+.+++| ||+-..+|+..    ...+|+++|+.+
T Consensus        26 ~~~~~~~~vVVI-DVLRAtTTi~~----Al~~Ga~~V~Pv   60 (247)
T 1vr0_A           26 EEKVKNKTAVVI-DMLRATSVITT----ALNNGCKRVVPV   60 (247)
T ss_dssp             GGGTTTSEEEEE-CTTTHHHHHHH----HHHTTCCEEEEC
T ss_pred             HHHCCCCEEEEE-ECCCHHHHHHH----HHHCCCCEEEEE
T ss_conf             644389979999-78876999999----998799889996


No 69 
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=37.65  E-value=24  Score=16.71  Aligned_cols=34  Identities=21%  Similarity=0.133  Sum_probs=28.2

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             2897599992004573889999999997899789999
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      -++++|++++.   +|.....++..|.+.|-..|+.+
T Consensus        80 ~~~~~ivv~C~---~G~rS~~aa~~L~~~G~~nV~~l  113 (137)
T 1qxn_A           80 DPEKPVVVFCK---TAARAALAGKTLREYGFKTIYNS  113 (137)
T ss_dssp             CTTSCEEEECC---SSSCHHHHHHHHHHHTCSCEEEE
T ss_pred             CCCCCEEEECC---CCCCHHHHHHHHHHCCCCCEEEE
T ss_conf             97763798738---99839999999998499667980


No 70 
>2jba_A Phosphate regulon transcriptional regulatory protein PHOB; transcription factor, sensory transduction, phosphate regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=36.28  E-value=26  Score=16.51  Aligned_cols=27  Identities=19%  Similarity=0.347  Sum_probs=17.6

Q ss_pred             CCEEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf             975999920045738899999999978997
Q gi|254780309|r   17 GLKILLIDDVYTTGATAKCAAIALKKAGAM   46 (59)
Q Consensus        17 gk~vliVDDiitTG~T~~~~~~~L~~~ga~   46 (59)
                      +|.||+|||--   .........|...|..
T Consensus         2 ~~rILiVDDd~---~~~~~l~~~L~~~G~~   28 (127)
T 2jba_A            2 ARRILVVEDEA---PIREMVCFVLEQNGFQ   28 (127)
T ss_dssp             CCEEEEECSCH---HHHHHHHHHHHHTTCE
T ss_pred             CCCEEEEECCH---HHHHHHHHHHHHCCCE
T ss_conf             98899997999---9999999999987999


No 71 
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=36.05  E-value=24  Score=16.69  Aligned_cols=33  Identities=21%  Similarity=0.150  Sum_probs=28.3

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             897599992004573889999999997899789999
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      ++++|++++   .+|.....++..|+..|-.+|+.+
T Consensus        81 ~~~~vi~~C---~~G~rs~~aa~~L~~~G~~~v~~l  113 (129)
T 1tq1_A           81 QSDNIIVGC---QSGGRSIKATTDLLHAGFTGVKDI  113 (129)
T ss_dssp             TTSSEEEEE---SSCSHHHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEEC---CCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             998499988---998499999999998189687993


No 72 
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=34.86  E-value=25  Score=16.65  Aligned_cols=38  Identities=18%  Similarity=0.233  Sum_probs=32.1

Q ss_pred             HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             021002897599992004573889999999997899789999
Q gi|254780309|r   10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      ....++.++++++|-    +|.+...+++.|.+.|...+.++
T Consensus       160 ~~~~~l~~~~vLviG----aGem~~~~~~~L~~~g~~~i~v~  197 (404)
T 1gpj_A          160 RELGSLHDKTVLVVG----AGEMGKTVAKSLVDRGVRAVLVA  197 (404)
T ss_dssp             HHHSCCTTCEEEEES----CCHHHHHHHHHHHHHCCSEEEEE
T ss_pred             HHCCCCCCCEEEEEC----CCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             861573348189983----84889999999995688860786


No 73 
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=33.47  E-value=29  Score=16.25  Aligned_cols=40  Identities=13%  Similarity=0.184  Sum_probs=33.0

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             89759999200457388999999999789978999999830
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      .|-.++=|++.-.++.|..++.+.|+..+. .+...++.+.
T Consensus        47 ~GD~Il~VnG~~v~~~~~~ev~~~l~~~~~-~v~L~V~~~~   86 (91)
T 2vsp_A           47 DEDVIIEVNGVNVLDEPYEKVVDRIQSSGK-NVTLLVCGKK   86 (91)
T ss_dssp             TTCEEEEETTEECTTSCHHHHHHHHTTSCS-EEEEEEEC--
T ss_pred             CCCEEEEECCEECCCCCHHHHHHHHHCCCC-EEEEEEECCC
T ss_conf             999999999999999989999999975999-6999998988


No 74 
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=32.25  E-value=31  Score=16.13  Aligned_cols=39  Identities=23%  Similarity=0.337  Sum_probs=32.1

Q ss_pred             HCCCCCEEEE--------EEEC-----CCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             0028975999--------9200-----4573889999999997899789999
Q gi|254780309|r   13 KHVAGLKILL--------IDDV-----YTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        13 ~~i~gk~vli--------VDDi-----itTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      .+++|++|||        +|+|     -.||.+=.++++.+..+|+....+.
T Consensus         4 ~~l~g~~vlIT~G~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~   55 (226)
T 1u7z_A            4 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVS   55 (226)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             HHCCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             0028998999668975666871363637821999999868987898899997


No 75 
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; zinc, structural genomics consortium, SGC, alternative splicing; 1.60A {Homo sapiens}
Probab=31.33  E-value=32  Score=16.05  Aligned_cols=42  Identities=14%  Similarity=0.042  Sum_probs=32.7

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf             897599992004573889999999997899789999998306
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL   57 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~   57 (59)
                      .|-.++=|++.-.+|.|..++.+.|++.....-..+.+.|-.
T Consensus        45 ~GD~Il~INg~~v~~~~~~e~v~~ir~~~~~~~v~l~V~R~~   86 (88)
T 3bpu_A           45 EGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQT   86 (88)
T ss_dssp             TTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred             CCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf             899999999999789989999999973999899999999789


No 76 
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, nysgrc, NEW YORK structural genomix research consortium; 2.00A {Bermanella marisrubri}
Probab=31.15  E-value=32  Score=16.03  Aligned_cols=28  Identities=21%  Similarity=0.235  Sum_probs=17.4

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf             8975999920045738899999999978997
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAM   46 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~   46 (59)
                      +.|.||||||--...   ....+.|...|..
T Consensus         5 ~~krILiVDDd~~~~---~~l~~~L~~~g~~   32 (132)
T 3lte_A            5 QSKRILVVDDDQAMA---AAIERVLKRDHWQ   32 (132)
T ss_dssp             --CEEEEECSCHHHH---HHHHHHHHHTTCE
T ss_pred             CCCEEEEEECCHHHH---HHHHHHHHHCCCE
T ss_conf             898699997999999---9999999988999


No 77 
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=30.90  E-value=33  Score=16.01  Aligned_cols=33  Identities=24%  Similarity=0.184  Sum_probs=27.6

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             897599992004573889999999997899789999
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      ++++|+++.   .+|.....++..|++.|-.+|+.+
T Consensus        51 ~~~~Iv~~C---~~g~rs~~aa~~L~~~G~~nv~~l   83 (106)
T 3hix_A           51 KSRDIYVYG---AGDEQTSQAVNLLRSAGFEHVSEL   83 (106)
T ss_dssp             TTSCEEEEC---SSHHHHHHHHHHHHHTTCSCEEEC
T ss_pred             CCCEEEEEC---CCCHHHHHHHHHHHHCCCCCEEEE
T ss_conf             998499999---998299999999998298578994


No 78 
>2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans}
Probab=30.82  E-value=17  Score=17.54  Aligned_cols=43  Identities=23%  Similarity=0.295  Sum_probs=38.0

Q ss_pred             HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             0028975999920045738899999999978997899999983
Q gi|254780309|r   13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      +..++..||+-.+-.=.|++=.++...|+..|.+.|..-.+|+
T Consensus        81 ~~~~~a~IlVaG~NFGcGSSREhA~~aL~~~Gi~aVIA~SFa~  123 (213)
T 2hcu_A           81 PEYREASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGD  123 (213)
T ss_dssp             GGGTTCCEEEECSSBTCSSCCHHHHHHHHHHTCCEEEESCBCH
T ss_pred             CCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHH
T ss_conf             4457870899446323576347898999985976884244999


No 79 
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=30.27  E-value=33  Score=15.95  Aligned_cols=40  Identities=10%  Similarity=0.163  Sum_probs=25.6

Q ss_pred             HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             0210028975999920045738899999999978997899999
Q gi|254780309|r   10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT   52 (59)
Q Consensus        10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~   52 (59)
                      .+...+++-+||+|||--+   .-......|...|.....++.
T Consensus         5 ~l~~~l~~l~vLvvdd~~~---~~~~l~~~L~~~G~~v~~~~~   44 (196)
T 1qo0_D            5 SLLGSLRELQVLVLNPPGE---VSDALVLQLIRIGCSVRQCWP   44 (196)
T ss_dssp             HHHHTGGGCEEEEESCTTH---HHHHHHHHHHHHTCEEEEECS
T ss_pred             HHHHHCCCCEEEEEECCHH---HHHHHHHHHHHCCCEEECCCC
T ss_conf             7876466986999957999---999999999986998871699


No 80 
>3kht_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.10A {Hahella chejuensis kctc 2396}
Probab=30.03  E-value=18  Score=17.39  Aligned_cols=29  Identities=10%  Similarity=0.171  Sum_probs=18.9

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf             28975999920045738899999999978997
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAM   46 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~   46 (59)
                      ++||+||||||--+.   .....+.|.+.|..
T Consensus         3 l~~krILlVdD~~~~---~~~l~~~L~~~g~~   31 (144)
T 3kht_A            3 LRSKRVLVVEDNPDD---IALIRRVLDRKDIH   31 (144)
T ss_dssp             --CEEEEEECCCHHH---HHHHHHHHHHTTCC
T ss_pred             CCCCEEEEEECCHHH---HHHHHHHHHHCCCC
T ss_conf             889989999589999---99999999968998


No 81 
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=28.05  E-value=37  Score=15.73  Aligned_cols=33  Identities=30%  Similarity=0.309  Sum_probs=20.1

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             897599992004573889999999997899789999
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      ++++|+++||   +|.....++..|+..|-.+|+++
T Consensus        62 ~~~~iVlyd~---~~~~a~raa~~L~~~G~~~V~vL   94 (539)
T 1yt8_A           62 RDTPITVYDD---GEGLAPVAAQRLHDLGYSDVALL   94 (539)
T ss_dssp             TTSCEEEECS---SSSHHHHHHHHHHHTTCSSEEEE
T ss_pred             CCCEEEEEEC---CCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             9986999979---89879999999997599877884


No 82 
>3h5j_A 3-isopropylmalate dehydratase small subunit; leucine biosynthesis, isopropylmalate isomerase, LEUD, amino-acid biosynthesis; 1.20A {Mycobacterium tuberculosis} PDB: 3h5h_A 3h5e_A
Probab=26.27  E-value=18  Score=17.44  Aligned_cols=43  Identities=21%  Similarity=0.190  Sum_probs=36.9

Q ss_pred             HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             0028975999920045738899999999978997899999983
Q gi|254780309|r   13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      ...++..||+-.+-+=.|++=+++...|+..|.+.|..-++||
T Consensus        60 ~~~~~~~IlVaG~NFGcGSSREhA~~al~~~Gi~aVIA~SFa~  102 (171)
T 3h5j_A           60 SPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGD  102 (171)
T ss_dssp             TTGGGCCEEEECSSBTCSSCCHHHHHHHHHHTCCEEEESSBCH
T ss_pred             CCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHH
T ss_conf             4668971999778426773088999999986978998357999


No 83 
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=25.45  E-value=41  Score=15.46  Aligned_cols=41  Identities=12%  Similarity=0.117  Sum_probs=33.8

Q ss_pred             CC-CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             28-9759999200457388999999999789978999999830
Q gi|254780309|r   15 VA-GLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus        15 i~-gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      |+ |-.|+=|++.-.+|.|..++.+.|++.....|... ++|.
T Consensus        63 L~~GD~Il~VNg~~v~~~~~~e~~~llk~~~~~~V~L~-v~r~  104 (108)
T 2d92_A           63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLG-ICSG  104 (108)
T ss_dssp             CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEE-EECC
T ss_pred             CCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCEEEEE-EEEC
T ss_conf             99699999999999889989999999962899869999-9948


No 84 
>1v7l_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 1.98A {Pyrococcus horikoshii OT3} SCOP: c.8.2.1
Probab=25.44  E-value=12  Score=18.37  Aligned_cols=48  Identities=23%  Similarity=0.330  Sum_probs=39.8

Q ss_pred             CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             510210028975999920045738899999999978997899999983
Q gi|254780309|r    8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus         8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      .++.....++-+|++-.+-+=+|++=.+++..++..|.+.|..-+++|
T Consensus        42 ~p~f~~~~~~g~IlVaG~nFG~GSSRE~A~~al~~~Gi~aVIA~SFar   89 (163)
T 1v7l_A           42 RPDFARNVRPGDVVVAGKNFGIGSSRESAALALKALGIAGVIAESFGR   89 (163)
T ss_dssp             CTTHHHHCCTTCEEECCSSBTBSCCCTHHHHHHHHHTCCEEEESCBCH
T ss_pred             CCCHHHCCCCCCEEEECCCEECCCCHHHHHHHHHHHCCCEEEEEHHHH
T ss_conf             952786178886899728553587768999999982998999825999


No 85 
>1u37_A Amyloid beta A4 precursor protein-binding, family A, member 1; X11S/mints, PDZ domain, scaffold protein, protein trafficking, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1u38_A
Probab=24.73  E-value=42  Score=15.38  Aligned_cols=41  Identities=17%  Similarity=0.176  Sum_probs=32.2

Q ss_pred             C-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             2-8975999920045738899999999978997899999983
Q gi|254780309|r   15 V-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        15 i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      + .|-.++=|+..-..|.|..++.+.|++++....-.+.+.|
T Consensus        48 l~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~~~v~L~v~R   89 (89)
T 1u37_A           48 LNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLNIVR   89 (89)
T ss_dssp             CCSSCEEEEETTEECTTSCHHHHHHHHHTCSSSSEEEEEEEC
T ss_pred             CCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf             999999999999998899899999999739999899999989


No 86 
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=24.69  E-value=43  Score=15.38  Aligned_cols=33  Identities=24%  Similarity=0.335  Sum_probs=20.4

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             289759999200457388999999999789978999
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI   50 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~   50 (59)
                      +++..||||||--+.   .....+.|.+.|...|..
T Consensus         3 l~~lrILiVDD~~~~---~~~l~~~L~~~g~~~v~~   35 (129)
T 3h1g_A            3 LGSMKLLVVDDSSTM---RRIIKNTLSRLGYEDVLE   35 (129)
T ss_dssp             ---CCEEEECSCHHH---HHHHHHHHHHTTCCCEEE
T ss_pred             CCCCEEEEEECCHHH---HHHHHHHHHHCCCEEEEE
T ss_conf             878899999288999---999999999869969999


No 87 
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Helicobacter pylori 26695}
Probab=24.35  E-value=43  Score=15.34  Aligned_cols=32  Identities=25%  Similarity=0.166  Sum_probs=27.4

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             28975999920045738899999999978997899
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVS   49 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~   49 (59)
                      -++++|+++..   +|.....++..|.+.|-..++
T Consensus        54 ~k~~~iiv~C~---sG~rS~~a~~~L~~~G~~~v~   85 (110)
T 2k0z_A           54 HKDKKVLLHCR---AGRRALDAAKSMHELGYTPYY   85 (110)
T ss_dssp             CSSSCEEEECS---SSHHHHHHHHHHHHTTCCCEE
T ss_pred             CCCCCEEEECC---CCHHHHHHHHHHHHCCCCEEE
T ss_conf             79986899889---984899999999985998799


No 88 
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=24.10  E-value=44  Score=15.32  Aligned_cols=34  Identities=26%  Similarity=0.345  Sum_probs=29.9

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             28975999920045738899999999978997899999
Q gi|254780309|r   15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT   52 (59)
Q Consensus        15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~   52 (59)
                      ..||+|+||-    .|.|...++..+...|+++|.++.
T Consensus       262 ~~gk~VvVIG----gG~vA~D~A~~a~r~ga~~V~vv~  295 (456)
T 2vdc_G          262 AAGKHVVVLG----GGDTAMDCVRTAIRQGATSVKCLY  295 (456)
T ss_dssp             CCCSEEEEEC----SSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             CCCCEEEEEC----CCHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             7898799989----778999999999974798599987


No 89 
>2yyv_A Probable 2-phosphosulfolactate phosphatase; uncharacterized conserved protein, structural genomics, NPPSFA; 1.65A {Thermotoga maritima MSB8} PDB: 2yzo_A
Probab=24.10  E-value=44  Score=15.32  Aligned_cols=34  Identities=24%  Similarity=0.168  Sum_probs=23.4

Q ss_pred             HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             002897599992004573889999999997899789999
Q gi|254780309|r   13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      ..++++.+++| ||+--.+|+..    +..+|+++|+.+
T Consensus        10 ~~~~~~~~VVI-DVLRAsTti~~----al~~Ga~~V~Pv   43 (227)
T 2yyv_A           10 SPVECRTAVVI-DVLRATSTIVT----ALSNGASGVIPV   43 (227)
T ss_dssp             SCEECSEEEEE-CTTTHHHHHHH----HHHTTCSEEEEC
T ss_pred             CCCCCCEEEEE-ECCCHHHHHHH----HHHCCCCEEEEC
T ss_conf             76789979999-78876999999----998899889976


No 90 
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, synthetic gene, isomerase; 1.60A {Candida albicans SC5314} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=23.98  E-value=12  Score=18.37  Aligned_cols=11  Identities=27%  Similarity=0.540  Sum_probs=8.8

Q ss_pred             CCCCEEEEEEE
Q ss_conf             28975999920
Q gi|254780309|r   15 VAGLKILLIDD   25 (59)
Q Consensus        15 i~gk~vliVDD   25 (59)
                      -+|+.|+|+||
T Consensus        16 k~G~~Viv~Dd   26 (204)
T 1tks_A           16 KNGEFLIVMDD   26 (204)
T ss_dssp             HTTCCEEEESS
T ss_pred             HCCCEEEEEEC
T ss_conf             88996999868


No 91 
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=23.92  E-value=44  Score=15.30  Aligned_cols=33  Identities=12%  Similarity=0.162  Sum_probs=28.1

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             897599992004573889999999997899789999
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL   51 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~   51 (59)
                      ++++|++..   -+|.+...++..|++.|-+.|+.+
T Consensus        90 ~~~~iv~~C---~~G~rs~~a~~~L~~~G~~~v~~l  122 (139)
T 3d1p_A           90 SAKELIFYC---ASGKRGGEAQKVASSHGYSNTSLY  122 (139)
T ss_dssp             TTSEEEEEC---SSSHHHHHHHHHHHTTTCCSEEEC
T ss_pred             CCCEEEEEC---CCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             998499988---998389999999998599787993


No 92 
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=23.42  E-value=39  Score=15.56  Aligned_cols=41  Identities=20%  Similarity=0.250  Sum_probs=31.5

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             89759999200457388999999999789978999999830
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS   56 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~   56 (59)
                      .|-.|+=|+..-..|.|..++.+.|+..+......+++.|-
T Consensus        55 ~GD~Il~VNg~~v~~~~~~e~~~llr~~~~~~~v~l~v~r~   95 (103)
T 1uep_A           55 PGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRK   95 (103)
T ss_dssp             TTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEEC
T ss_conf             89999999999968997999999997399999899999758


No 93 
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=23.20  E-value=46  Score=15.22  Aligned_cols=42  Identities=17%  Similarity=0.165  Sum_probs=34.3

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf             897599992004573889999999997899789999998306
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL   57 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~   57 (59)
                      .|-.|+=|++.-..|.|..++.+.|++.+......+.+.|..
T Consensus        60 ~GD~Il~INg~~v~~~t~~e~~~ll~~~~~~~~v~l~v~r~~  101 (111)
T 2koj_A           60 AGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQE  101 (111)
T ss_dssp             TTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECC
T ss_pred             CCCEEEEECCEECCCCCHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf             999999999999889999999999981899998999998289


No 94 
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=22.23  E-value=33  Score=16.01  Aligned_cols=40  Identities=25%  Similarity=0.137  Sum_probs=28.3

Q ss_pred             CCEEEEEEECCCCCHHHH----HHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf             975999920045738899----99999997899789999998306
Q gi|254780309|r   17 GLKILLIDDVYTTGATAK----CAAIALKKAGAMTVSILTFSRSL   57 (59)
Q Consensus        17 gk~vliVDDiitTG~T~~----~~~~~L~~~ga~~V~~~~lar~~   57 (59)
                      |+.+ =+|=-++||.-+.    +.-++++.+||+.|.+---|++-
T Consensus        14 Gq~~-d~~~~VsT~~ELqr~L~EL~~~i~r~GAr~V~IsIsA~~~   57 (106)
T 1qys_A           14 GKNF-DYTYTVTTESELQKVLNELMDYIKKQGAKRVRISITARTK   57 (106)
T ss_dssp             SCEE-EEEEEESSSSHHHHHHHHHHHHHHHHCCSEEEEEEECSSH
T ss_pred             CCEE-EEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCH
T ss_conf             8188-8999980548999999999999987176458999996667


No 95 
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=21.60  E-value=49  Score=15.04  Aligned_cols=40  Identities=18%  Similarity=0.092  Sum_probs=31.7

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             8975999920045738899999999978997899999983
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      .|-.|+=|++.-..|.|..++.+.|++.....-..+.+.|
T Consensus        50 ~GD~Il~VNg~~v~~~t~~evv~~lr~~~~g~~v~L~v~R   89 (96)
T 1ujv_A           50 EGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHR   89 (96)
T ss_dssp             SSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEEC
T ss_pred             CCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf             9999999999996899899999999729999989999987


No 96 
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=21.19  E-value=50  Score=14.99  Aligned_cols=44  Identities=20%  Similarity=0.096  Sum_probs=35.2

Q ss_pred             C-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf             2-8975999920045738899999999978997899999983068
Q gi|254780309|r   15 V-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK   58 (59)
Q Consensus        15 i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~   58 (59)
                      | .|-.|+=|++.-..|.|..++.+.|++.......-+++.|..+
T Consensus        84 L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~~~v~L~v~R~~p  128 (131)
T 1wfg_A           84 LRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGP  128 (131)
T ss_dssp             CCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred             CCCCCEEEEECCEECCCCCHHHHHHHHHHCCCCCEEEEEEEECCC
T ss_conf             777999999999997899899999999828999989999982798


No 97 
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=20.90  E-value=51  Score=14.95  Aligned_cols=31  Identities=26%  Similarity=0.254  Sum_probs=20.5

Q ss_pred             HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf             0028975999920045738899999999978997
Q gi|254780309|r   13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAM   46 (59)
Q Consensus        13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~   46 (59)
                      +.+...+||||||--.   ....+.+.|.+.|..
T Consensus         6 ~~~~pl~VLiVDD~~~---~r~~l~~~L~~~g~~   36 (140)
T 3c97_A            6 SQIMPLSVLIAEDNDI---CRLVAAKALEKCTND   36 (140)
T ss_dssp             ----CCEEEEECCCHH---HHHHHHHHHTTTCSE
T ss_pred             CCCCCCEEEEEECCHH---HHHHHHHHHHHCCCE
T ss_conf             9999998999939899---999999999987999


No 98 
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=20.85  E-value=51  Score=14.95  Aligned_cols=39  Identities=26%  Similarity=0.141  Sum_probs=33.7

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             897599992004573889999999997899789999998
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS   54 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la   54 (59)
                      .|-.|+=|++.-..|.|..++.+.|+..+...|.+.++.
T Consensus        56 ~GD~Il~INg~~v~~~~~~ev~~~l~~~~~~~v~l~v~~   94 (111)
T 1vae_A           56 EGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVS   94 (111)
T ss_dssp             TTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEEC
T ss_pred             CCCEEEEECCEECCCCCHHHHHHHHHCCCCCEEEEEEEC
T ss_conf             899999999999899989999999876899868999978


No 99 
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; Cys Ser mutant, structural genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=20.79  E-value=39  Score=15.59  Aligned_cols=40  Identities=15%  Similarity=0.209  Sum_probs=31.3

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf             8975999920045738899999999978997899999983
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR   55 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar   55 (59)
                      .|-.++=|++.-.+|.|..++.+.|++.+....-.+++.|
T Consensus        48 ~GD~Il~VNg~~v~~~t~~ev~~~l~~~~~~~~v~L~V~r   87 (90)
T 2q9v_A           48 SGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQ   87 (90)
T ss_dssp             TTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred             CCCEEEEECCEECCCCCHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf             9999999999998999899999999858999889999995


No 100
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE; 1.76A {Sinorhizobium medicae WSM419}
Probab=20.60  E-value=52  Score=14.92  Aligned_cols=20  Identities=15%  Similarity=0.054  Sum_probs=10.4

Q ss_pred             EEEEEEECCC---CCHHHHHHHH
Q ss_conf             5999920045---7388999999
Q gi|254780309|r   19 KILLIDDVYT---TGATAKCAAI   38 (59)
Q Consensus        19 ~vliVDDiit---TG~T~~~~~~   38 (59)
                      .++|+|..+-   +|..+....+
T Consensus        52 dlvi~D~~~p~~~~G~el~~~ir   74 (132)
T 2rdm_A           52 DGVVTDIRFCQPPDGWQVARVAR   74 (132)
T ss_dssp             CEEEEESCCSSSSCHHHHHHHHH
T ss_pred             CEEEEEECCCCCCCHHHHHHHHH
T ss_conf             79987300589999999999999


No 101
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=20.53  E-value=37  Score=15.73  Aligned_cols=37  Identities=30%  Similarity=0.234  Sum_probs=27.0

Q ss_pred             EEEEECCCCCHHHH----HHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf             99920045738899----99999997899789999998306
Q gi|254780309|r   21 LLIDDVYTTGATAK----CAAIALKKAGAMTVSILTFSRSL   57 (59)
Q Consensus        21 liVDDiitTG~T~~----~~~~~L~~~ga~~V~~~~lar~~   57 (59)
                      +=+|=-++||.-+.    +.-++++.+||+.|.+---|++-
T Consensus        19 ~e~~~~VsT~~EL~r~L~EL~~~i~r~GAr~V~IsIsA~~~   59 (96)
T 2jvf_A           19 IEIDIRVSTGKELERALQELEKALARAGARNVQITISAEND   59 (96)
T ss_dssp             EEEEEECCSSSHHHHHHHHHHHHHHHHTCSEEEEEEECSSH
T ss_pred             EEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCH
T ss_conf             88999981438999999999999986176448999996566


No 102
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT}
Probab=20.24  E-value=34  Score=15.89  Aligned_cols=27  Identities=15%  Similarity=0.148  Sum_probs=13.4

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf             897599992004573889999999997899
Q gi|254780309|r   16 AGLKILLIDDVYTTGATAKCAAIALKKAGA   45 (59)
Q Consensus        16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga   45 (59)
                      ..|+||||||--....   .....|...|.
T Consensus         2 s~~~vLiVDD~~~~~~---~l~~~L~~~G~   28 (127)
T 3i42_A            2 SLQQALIVEDYQAAAE---TFKELLEMLGF   28 (127)
T ss_dssp             CCEEEEEECSCHHHHH---HHHHHHHHTTE
T ss_pred             CCCEEEEEECCHHHHH---HHHHHHHHCCC
T ss_conf             9888999957899999---99999998799


Done!