Query gi|254780309|ref|YP_003064722.1| comF family protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 59
No_of_seqs 104 out of 2972
Neff 6.1
Searched_HMMs 13730
Date Wed Jun 1 02:53:34 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780309.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wd5a_ c.61.1.1 (A:) Putative 99.1 1.2E-10 8.7E-15 76.5 6.1 43 12-54 115-157 (208)
2 d2c4ka2 c.61.1.2 (A:167-350) P 99.0 1.3E-10 9.3E-15 76.3 5.5 46 13-58 79-124 (184)
3 d1u9ya2 c.61.1.2 (A:156-284) P 99.0 2.5E-10 1.8E-14 74.8 6.2 47 12-58 45-91 (129)
4 d1fsga_ c.61.1.1 (A:) Hypoxant 99.0 4.3E-10 3.1E-14 73.5 6.8 51 5-55 130-180 (233)
5 d1cjba_ c.61.1.1 (A:) Hypoxant 99.0 4.3E-10 3.2E-14 73.5 6.4 45 10-54 129-173 (228)
6 d1z7ga1 c.61.1.1 (A:4-217) Hyp 99.0 4.7E-10 3.4E-14 73.3 6.4 46 10-55 116-161 (214)
7 d1pzma_ c.61.1.1 (A:) Hypoxant 99.0 4.6E-10 3.3E-14 73.3 6.2 52 4-55 86-137 (183)
8 d1yfza1 c.61.1.1 (A:3-180) Xan 99.0 6.6E-10 4.8E-14 72.5 6.7 51 5-55 80-130 (178)
9 d1ufra_ c.61.1.1 (A:) Pyrimidi 98.9 5.5E-10 4E-14 72.9 6.1 47 9-55 88-135 (178)
10 d1dkua2 c.61.1.2 (A:167-315) P 98.9 4.3E-10 3.1E-14 73.5 5.4 47 12-58 45-91 (149)
11 d1vdma1 c.61.1.1 (A:1-153) Ppr 98.9 6E-10 4.4E-14 72.7 5.9 47 10-56 76-122 (153)
12 d1tc1a_ c.61.1.1 (A:) Hypoxant 98.9 9.6E-10 7E-14 71.6 6.4 47 9-55 92-138 (184)
13 d1a3ca_ c.61.1.1 (A:) Pyrimidi 98.9 1.6E-09 1.1E-13 70.5 6.4 46 10-55 89-135 (178)
14 d1j7ja_ c.61.1.1 (A:) Hypoxant 98.9 1.4E-09 1E-13 70.7 5.9 49 7-55 80-128 (172)
15 d1hgxa_ c.61.1.1 (A:) Hypoxant 98.9 1.7E-09 1.3E-13 70.2 6.1 50 7-56 79-128 (173)
16 d1w30a_ c.61.1.1 (A:) Pyrimidi 98.9 1.6E-09 1.2E-13 70.4 5.6 45 11-55 95-140 (182)
17 d1vcha1 c.61.1.1 (A:2-175) Put 98.8 3.7E-09 2.7E-13 68.4 7.1 44 13-56 115-158 (174)
18 d1dqna_ c.61.1.1 (A:) Guanine 98.7 8.7E-10 6.3E-14 71.9 -0.1 49 5-53 106-154 (230)
19 d1gph11 c.61.1.1 (1:235-465) G 98.6 1.9E-08 1.4E-12 64.6 5.0 48 11-58 98-145 (231)
20 d1g2qa_ c.61.1.1 (A:) Adenine 98.5 6.4E-08 4.7E-12 61.7 5.9 40 15-54 120-159 (178)
21 d1ecfa1 c.61.1.1 (A:250-492) G 98.5 3.8E-08 2.8E-12 63.0 4.8 48 11-58 104-151 (243)
22 d1qb7a_ c.61.1.1 (A:) Adenine 98.5 1.2E-07 8.5E-12 60.4 5.9 40 15-54 136-175 (236)
23 d1zn7a1 c.61.1.1 (A:3-180) Ade 98.5 1.4E-07 1E-11 60.0 6.0 39 16-54 117-155 (178)
24 d1y0ba1 c.61.1.1 (A:1-191) Xan 98.5 1.4E-07 1E-11 59.9 5.9 41 15-55 115-155 (191)
25 d1o57a2 c.61.1.1 (A:75-276) Pu 98.4 9.7E-08 7.1E-12 60.8 4.8 39 16-54 121-159 (202)
26 d1l1qa_ c.61.1.1 (A:) Adenine 98.3 4E-07 2.9E-11 57.5 5.2 39 16-54 115-155 (181)
27 d2aeea1 c.61.1.1 (A:1-208) Oro 98.3 8E-07 5.8E-11 55.8 5.9 40 15-54 113-152 (208)
28 d1lh0a_ c.61.1.1 (A:) Orotate 98.1 2.2E-06 1.6E-10 53.4 5.6 40 16-55 116-155 (213)
29 d1nula_ c.61.1.1 (A:) Xanthine 97.9 1.7E-06 1.2E-10 54.1 2.2 38 13-55 75-112 (150)
30 d1i5ea_ c.61.1.1 (A:) Uracil P 97.9 7.8E-06 5.7E-10 50.5 4.8 50 7-56 113-162 (208)
31 d1o5oa_ c.61.1.1 (A:) Uracil P 97.8 1.6E-05 1.1E-09 48.8 5.6 48 9-56 117-164 (210)
32 d1v9sa1 c.61.1.1 (A:1-208) Ura 97.7 1.4E-05 1E-09 49.2 4.3 47 10-56 116-162 (208)
33 d1bd3a_ c.61.1.1 (A:) Uracil P 97.6 4.4E-05 3.2E-09 46.4 5.5 47 8-54 128-176 (224)
34 d1xtta1 c.61.1.1 (A:2-216) Ura 97.1 0.00024 1.7E-08 42.5 3.9 41 16-56 131-171 (215)
35 d1dcfa_ c.23.1.2 (A:) Receiver 75.9 2.1 0.00015 21.2 4.7 31 13-46 3-33 (134)
36 d1u0sy_ c.23.1.1 (Y:) CheY pro 64.1 5.1 0.00037 19.1 4.8 29 17-48 1-29 (118)
37 d1gpja2 c.2.1.7 (A:144-302) Gl 62.2 2.9 0.00021 20.4 3.0 41 8-52 15-55 (159)
38 d1nyta1 c.2.1.7 (A:102-271) Sh 58.2 6.6 0.00048 18.5 4.9 39 12-57 13-51 (170)
39 d1nvta1 c.2.1.7 (A:111-287) Sh 55.9 7.2 0.00053 18.2 4.3 35 11-51 12-46 (177)
40 d1npya1 c.2.1.7 (A:103-269) Sh 54.8 7.5 0.00055 18.2 4.2 35 16-56 16-50 (167)
41 d1vi2a1 c.2.1.7 (A:107-288) Pu 45.4 11 0.00078 17.3 5.4 36 13-52 14-49 (182)
42 d1gmxa_ c.46.1.3 (A:) Sulfurtr 37.5 15 0.0011 16.6 3.7 34 15-51 56-89 (108)
43 d1qxna_ c.46.1.3 (A:) Polysulf 34.5 16 0.0012 16.3 3.2 33 16-51 81-113 (137)
44 d1uepa_ b.36.1.1 (A:) Membrane 34.3 11 0.00082 17.2 2.3 43 15-57 53-96 (103)
45 d1p6qa_ c.23.1.1 (A:) CheY pro 33.5 17 0.0012 16.2 3.2 28 19-49 8-35 (129)
46 d1p77a1 c.2.1.7 (A:102-272) Sh 32.1 18 0.0013 16.1 4.4 37 13-56 14-50 (171)
47 d1tq1a_ c.46.1.3 (A:) Thiosulf 31.6 17 0.0013 16.2 2.9 33 16-51 71-103 (119)
48 d2c4ka1 c.61.1.2 (A:7-166) PRP 29.7 20 0.0014 15.9 4.6 42 11-52 45-90 (160)
49 d1x6da1 b.36.1.2 (A:8-114) Int 26.9 22 0.0016 15.6 3.3 40 16-55 56-95 (107)
50 d1dkua1 c.61.1.2 (A:8-166) Pho 26.8 22 0.0016 15.6 4.9 42 11-52 42-87 (159)
51 d1u7za_ c.72.3.1 (A:) Coenzyme 26.7 22 0.0016 15.6 4.5 39 13-51 2-53 (223)
52 d2cssa1 b.36.1.1 (A:8-115) Reg 25.9 23 0.0017 15.5 3.5 41 15-55 66-107 (108)
53 d1u9ya1 c.61.1.2 (A:1-155) Pho 24.8 24 0.0018 15.4 4.4 42 11-52 41-85 (155)
54 d1wifa_ b.36.1.1 (A:) hypothet 24.7 25 0.0018 15.4 3.6 41 15-55 68-109 (126)
55 d1i3ca_ c.23.1.1 (A:) Response 24.6 25 0.0018 15.4 4.3 25 18-45 4-28 (144)
56 d1k68a_ c.23.1.1 (A:) Response 24.2 25 0.0018 15.3 4.9 26 17-45 2-27 (140)
57 d1vaea_ b.36.1.1 (A:) Rhophili 23.2 26 0.0019 15.2 4.5 39 16-54 56-94 (111)
58 d1v7la_ c.8.2.1 (A:) Isopropyl 22.7 8.3 0.00061 17.9 -0.0 47 9-55 43-89 (162)
59 d1zesa1 c.23.1.1 (A:3-123) Pho 21.7 28 0.0021 15.0 4.4 25 18-45 1-25 (121)
60 d1m0sa1 c.124.1.4 (A:1-126,A:1 21.6 23 0.0017 15.6 2.0 34 13-50 16-49 (147)
61 d1ujva_ b.36.1.1 (A:) Membrane 20.8 30 0.0022 14.9 4.3 43 14-56 47-90 (96)
62 d1gtea3 c.3.1.1 (A:288-440) Di 20.6 30 0.0022 14.9 4.0 33 16-52 44-76 (153)
No 1
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]}
Probab=99.06 E-value=1.2e-10 Score=76.50 Aligned_cols=43 Identities=23% Similarity=0.288 Sum_probs=39.4
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 1002897599992004573889999999997899789999998
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59)
..+++||+|+||||+++||+|+.++++.|+++||++|++++..
T Consensus 115 ~~~v~gk~ViLVDD~I~TG~T~~aa~~~L~~~ga~~V~~a~~v 157 (208)
T d1wd5a_ 115 KAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPV 157 (208)
T ss_dssp CCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 7345898899970400135789999999995699889996034
No 2
>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=1.3e-10 Score=76.34 Aligned_cols=46 Identities=24% Similarity=0.324 Sum_probs=42.3
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 0028975999920045738899999999978997899999983068
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
.+++||+|+||||+++||.|+..+++.|++.||++|++++-+..++
T Consensus 79 GdVkGk~vIIVDD~I~TG~T~~~a~~~Lk~~GA~~v~~~~tH~~~~ 124 (184)
T d2c4ka2 79 GDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILS 124 (184)
T ss_dssp SCCTTEEEEEECSEESSTHHHHHHHHHHHTTTEEEEEEEEEEECCC
T ss_pred EECCCCEEEEECCHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf 7416988999621331457799999999742655534788750317
No 3
>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=99.01 E-value=2.5e-10 Score=74.76 Aligned_cols=47 Identities=23% Similarity=0.331 Sum_probs=42.4
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 10028975999920045738899999999978997899999983068
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
..+++||+|+||||+++||.|+.++++.|++.||++|++++-+..++
T Consensus 45 ~gdv~gk~viIvDDii~TGgTl~~aa~~Lk~~GA~~V~~~~tHgifs 91 (129)
T d1u9ya2 45 TLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLI 91 (129)
T ss_dssp SCCCTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCC
T ss_pred CCCCCCEEEEEECCHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 23343207999742440651099999999705776358997546659
No 4
>d1fsga_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Toxoplasma gondii [TaxId: 5811]}
Probab=98.99 E-value=4.3e-10 Score=73.52 Aligned_cols=51 Identities=22% Similarity=0.240 Sum_probs=44.5
Q ss_pred EEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 882510210028975999920045738899999999978997899999983
Q gi|254780309|r 5 FNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 5 f~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
..+.......++||+|||||||++||.|+.++.+.|++.||++|.+++|.-
T Consensus 130 ~~~~~~~~~~i~gk~VLlVDDIlDTG~TL~~~~~~L~~~gp~sv~~avLld 180 (233)
T d1fsga_ 130 LTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVE 180 (233)
T ss_dssp EEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred CCCCCCCHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 320245704426961898602031789999999999744764102999998
No 5
>d1cjba_ c.61.1.1 (A:) Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium falciparum [TaxId: 5833]}
Probab=98.98 E-value=4.3e-10 Score=73.48 Aligned_cols=45 Identities=27% Similarity=0.245 Sum_probs=41.4
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 021002897599992004573889999999997899789999998
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59)
....+++||+|||||||++||.|+.++.+.|++.||++|.+++|.
T Consensus 129 ~~~~~i~gk~VLlVDDIlDTG~TL~~~~~~L~~~gp~sv~~avLl 173 (228)
T d1cjba_ 129 EDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLF 173 (228)
T ss_dssp SCGGGGBTCEEEEEEEEESSSHHHHHHHHHHGGGCBSEEEEEEEE
T ss_pred CCHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf 781652896468851314388999999999975476601799866
No 6
>d1z7ga1 c.61.1.1 (A:4-217) Hypoxanthine-guanine PRTase (HGPRTase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.97 E-value=4.7e-10 Score=73.27 Aligned_cols=46 Identities=15% Similarity=0.262 Sum_probs=42.0
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 0210028975999920045738899999999978997899999983
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
....+++||+|||||||++||.|+.++.+.|++.||++|.+++|.-
T Consensus 116 ~~~~~i~gk~VLiVDDIlDTG~TL~~~~~~l~~~gp~sv~~avLld 161 (214)
T d1z7ga1 116 DDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLV 161 (214)
T ss_dssp SCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred CCHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 7827654056799611344899999999999753877279999997
No 7
>d1pzma_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Leishmania tarentolae [TaxId: 5689]}
Probab=98.97 E-value=4.6e-10 Score=73.35 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=45.2
Q ss_pred EEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 0882510210028975999920045738899999999978997899999983
Q gi|254780309|r 4 AFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 4 af~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
...+..+...+++||+|||||||++||.|+.++.+.|++.||++|.+++|..
T Consensus 86 ~~~~~~~~~~~~~gk~VLlVDDI~DTG~Tl~~~~~~l~~~~p~~v~~avL~~ 137 (183)
T d1pzma_ 86 QVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLD 137 (183)
T ss_dssp ---CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred CEEECCCCCCHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 4024046730010462799720650038999999999864876216999998
No 8
>d1yfza1 c.61.1.1 (A:3-180) Xanthine-guanine PRTase (XPRTase) {Thermoanaerobacter tengcongensis [TaxId: 119072]}
Probab=98.96 E-value=6.6e-10 Score=72.51 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=44.7
Q ss_pred EEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 882510210028975999920045738899999999978997899999983
Q gi|254780309|r 5 FNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 5 f~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
..+..+...+++||+|||||||++||.|+.++.+.|++.|++++.+++|.-
T Consensus 80 ~~~~~~~~~~~~gk~VLlVDDVldTG~Tl~~~~~~l~~~~~~~v~~avL~~ 130 (178)
T d1yfza1 80 VKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILD 130 (178)
T ss_dssp EEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred EEEECCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 588257763778998999951201218999999999720853158999997
No 9
>d1ufra_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Thermus thermophilus [TaxId: 274]}
Probab=98.95 E-value=5.5e-10 Score=72.92 Aligned_cols=47 Identities=30% Similarity=0.393 Sum_probs=41.9
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC-CCEEEEEEEEE
Q ss_conf 102100289759999200457388999999999789-97899999983
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAG-AMTVSILTFSR 55 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~g-a~~V~~~~lar 55 (59)
.....+++||+|||||||++||.||.++.+.|.+.| |+++.+++|..
T Consensus 88 ~~~~~~i~gk~VLiVDDIlDTG~TL~~~~~~l~~~g~~~~i~~avL~d 135 (178)
T d1ufra_ 88 TRIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVD 135 (178)
T ss_dssp EEECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf 457666579869999724585457999999985318975899999985
No 10
>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=98.95 E-value=4.3e-10 Score=73.51 Aligned_cols=47 Identities=32% Similarity=0.328 Sum_probs=42.0
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 10028975999920045738899999999978997899999983068
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
..+++||+++|||||++||.|+.++++.|++.||++|++++-+..++
T Consensus 45 ~GdV~gk~viIvDDmi~TGgTl~~aa~~L~~~GA~~V~~~~THglfs 91 (149)
T d1dkua2 45 VGNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLS 91 (149)
T ss_dssp ESCCTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSEECCC
T ss_pred EEEECCCEEEEEHHHHHCHHHHHHHHHHHHHHCCCEEEEEEEECCCC
T ss_conf 03107978998724554608699999999970995599997303348
No 11
>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.94 E-value=6e-10 Score=72.71 Aligned_cols=47 Identities=23% Similarity=0.371 Sum_probs=42.1
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999830
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
+....++||+||||||+++||.|+.++.+.|++.||++|.+++|..-
T Consensus 76 ~~~~~~~gk~VLIVDDii~TG~Tl~~~~~~l~~~g~~~v~~avl~~k 122 (153)
T d1vdma1 76 PIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMK 122 (153)
T ss_dssp CCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEEC
T ss_pred CCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEEC
T ss_conf 15545689989999601446874899998777409852789999987
No 12
>d1tc1a_ c.61.1.1 (A:) Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 5693]}
Probab=98.92 E-value=9.6e-10 Score=71.62 Aligned_cols=47 Identities=11% Similarity=0.163 Sum_probs=42.3
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 10210028975999920045738899999999978997899999983
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
.....+++||+|||||||++||.|+.++.+.|++.|++++..++|.-
T Consensus 92 ~~~~~~~~gk~VLlVDDIldTG~Tl~~~~~~l~~~~~~~i~~avL~~ 138 (184)
T d1tc1a_ 92 LDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLD 138 (184)
T ss_dssp ECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEE
T ss_pred CCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 35762212304799942045789999999999605575535999998
No 13
>d1a3ca_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Bacillus subtilis [TaxId: 1423]}
Probab=98.88 E-value=1.6e-09 Score=70.47 Aligned_cols=46 Identities=22% Similarity=0.361 Sum_probs=40.7
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH-CCCCEEEEEEEEE
Q ss_conf 021002897599992004573889999999997-8997899999983
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKK-AGAMTVSILTFSR 55 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~-~ga~~V~~~~lar 55 (59)
+...+++||+|||||||++||.||.++.+.|++ .+|++|.+++|..
T Consensus 89 ~~~~~l~gk~VLIVDDIlDTG~TL~~~~~~l~~~~~p~~v~~avL~d 135 (178)
T d1a3ca_ 89 DIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVD 135 (178)
T ss_dssp ECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 57521259789999411136807999999997438975899999986
No 14
>d1j7ja_ c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typhimurium [TaxId: 90371]}
Probab=98.87 E-value=1.4e-09 Score=70.70 Aligned_cols=49 Identities=16% Similarity=0.297 Sum_probs=43.3
Q ss_pred ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 2510210028975999920045738899999999978997899999983
Q gi|254780309|r 7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
...+...+++||+|||||||++||.|+.++.+.|++.|++++.+++|.-
T Consensus 80 ~~~~~~~~~~gk~VLlVDDVldTG~TL~~~~~~l~~~~p~~i~~avL~~ 128 (172)
T d1j7ja_ 80 ILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLD 128 (172)
T ss_dssp CSBCCSSCCBTSEEEEEEEEESSCHHHHHHHHHHHTTCBSEEEEEEEEE
T ss_pred EECCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 6258875658977999840124889999999999734878249999999
No 15
>d1hgxa_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Tritrichomonas foetus [TaxId: 5724]}
Probab=98.87 E-value=1.7e-09 Score=70.21 Aligned_cols=50 Identities=16% Similarity=0.311 Sum_probs=43.9
Q ss_pred ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 25102100289759999200457388999999999789978999999830
Q gi|254780309|r 7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
+..+...+++||+|||||||++||.|+.++.+.|++.+|++|.+++|.--
T Consensus 79 i~~~~~~~~~gk~VLlVDDI~dtG~Tl~~~~~~l~~~~p~~v~~avL~~K 128 (173)
T d1hgxa_ 79 ISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDK 128 (173)
T ss_dssp EEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEE
T ss_pred EEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCEEEEEEEEEE
T ss_conf 64215642034200688667622078999999998449871679888873
No 16
>d1w30a_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.85 E-value=1.6e-09 Score=70.37 Aligned_cols=45 Identities=22% Similarity=0.379 Sum_probs=40.3
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC-CCEEEEEEEEE
Q ss_conf 2100289759999200457388999999999789-97899999983
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAG-AMTVSILTFSR 55 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~g-a~~V~~~~lar 55 (59)
...+++||+|||||||++||.|+.++.+.|++.| |++|.+++|..
T Consensus 95 ~~~~l~gk~VLlVDDIlDTG~TL~~~~~~l~~~g~~~~v~~avLvd 140 (182)
T d1w30a_ 95 PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVD 140 (182)
T ss_dssp CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 4415389689998120044704999999998539987899999983
No 17
>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]}
Probab=98.84 E-value=3.7e-09 Score=68.44 Aligned_cols=44 Identities=23% Similarity=0.403 Sum_probs=40.4
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 00289759999200457388999999999789978999999830
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
..++|++|+||||+++||.|+.++.+.|+++|++.+.++++...
T Consensus 115 ~~~~g~rVlIVDDvi~TG~Tl~a~~~~l~~~Ga~vv~v~vl~~~ 158 (174)
T d1vcha1 115 EKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQ 158 (174)
T ss_dssp HHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred CCCCCCEEEEEECEECCCHHHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf 23589889998530603489999999999879979999999947
No 18
>d1dqna_ c.61.1.1 (A:) Guanine PRTase {Giardia lamblia [TaxId: 5741]}
Probab=98.69 E-value=8.7e-10 Score=71.85 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=41.9
Q ss_pred EEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 8825102100289759999200457388999999999789978999999
Q gi|254780309|r 5 FNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTF 53 (59)
Q Consensus 5 f~i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~l 53 (59)
..+..+....++||+|||||||++||.|+.++.+.|++.||+++.++++
T Consensus 106 ~~i~~~~~~~i~gk~VLIVDDIvDTG~TL~~l~~~L~~~~~~Sv~i~~l 154 (230)
T d1dqna_ 106 VFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKHAKICSCFVKDV 154 (230)
T ss_dssp ECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTTCEEEEEEESCH
T ss_pred CCEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 3200123322379736997401020379999999886369966999875
No 19
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=98.62 E-value=1.9e-08 Score=64.65 Aligned_cols=48 Identities=27% Similarity=0.430 Sum_probs=42.4
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 210028975999920045738899999999978997899999983068
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
.+..++||+|+||||.|.+|+|+..+++.|+++||++|++..-+..++
T Consensus 98 ~~~~i~gK~vvlVDDSIVRGtT~k~iv~~lr~aGakeVh~~i~sPpi~ 145 (231)
T d1gph11 98 VRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIA 145 (231)
T ss_dssp CHHHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSCCCC
T ss_pred HHHEECCCCEEEEEHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCEE
T ss_conf 341121674488501344030299999999980997599983442225
No 20
>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.54 E-value=6.4e-08 Score=61.74 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=37.8
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 2897599992004573889999999997899789999998
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59)
.+|++|+||||+++||.|+.++.+.+++.|++.+.++++.
T Consensus 120 ~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvgv~vii 159 (178)
T d1g2qa_ 120 PAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVM 159 (178)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCCEEEEEEHHHHHCHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 6897799982574517399999999998699899999999
No 21
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.54 E-value=3.8e-08 Score=62.99 Aligned_cols=48 Identities=21% Similarity=0.302 Sum_probs=42.6
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECC
Q ss_conf 210028975999920045738899999999978997899999983068
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~~ 58 (59)
.+..++||.|+||||.|.+|+|+..+.+.|+++||++|++..-+..+.
T Consensus 104 ~~~~i~gk~vvlVDDSIVRGtT~k~iv~~L~~~gakeih~~i~sPpi~ 151 (243)
T d1ecfa1 104 NRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIR 151 (243)
T ss_dssp CGGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCCCC
T ss_pred CHHEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
T ss_conf 011131551799725777646699999999971998689996333114
No 22
>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]}
Probab=98.48 E-value=1.2e-07 Score=60.35 Aligned_cols=40 Identities=30% Similarity=0.456 Sum_probs=37.6
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 2897599992004573889999999997899789999998
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59)
.+|++|+||||+++||.|+.++.+.+++.|++.+.++++.
T Consensus 136 ~~g~rVlIVDDviaTGgT~~aa~~ll~~~Ga~Vvg~~~vv 175 (236)
T d1qb7a_ 136 GKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSIL 175 (236)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 6885588850330156799999999998799799999999
No 23
>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.46 E-value=1.4e-07 Score=59.96 Aligned_cols=39 Identities=23% Similarity=0.431 Sum_probs=36.8
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 897599992004573889999999997899789999998
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59)
+|++|+||||+++||.|+.++.+.++++|++.+.++++.
T Consensus 117 ~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~~ii 155 (178)
T d1zn7a1 117 PGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLV 155 (178)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCEEEEEHHHHHHCHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 797689863554516499999999998799899999999
No 24
>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=98.45 E-value=1.4e-07 Score=59.90 Aligned_cols=41 Identities=27% Similarity=0.304 Sum_probs=38.3
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 28975999920045738899999999978997899999983
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
.+|++|+||||+++||.|+.++.+.++++|++.+.++++.-
T Consensus 115 ~~g~rVlIVDDvi~TG~T~~~~~~ll~~~Ga~vv~v~vlid 155 (191)
T d1y0ba1 115 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIE 155 (191)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCCEEEEHHHHHHHCHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_conf 47965888688665176799999999988998999999998
No 25
>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=98.44 E-value=9.7e-08 Score=60.77 Aligned_cols=39 Identities=26% Similarity=0.318 Sum_probs=37.0
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 897599992004573889999999997899789999998
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59)
+|++|+||||+++||.|+.++.+.++++||+.+.++++.
T Consensus 121 ~g~rVlIVDDvi~TG~T~~a~~~~l~~~Ga~vv~~~vlv 159 (202)
T d1o57a2 121 TGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLV 159 (202)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEE
T ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 496599974776516899999999998799899999999
No 26
>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]}
Probab=98.30 E-value=4e-07 Score=57.47 Aligned_cols=39 Identities=31% Similarity=0.278 Sum_probs=34.3
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCE--EEEEEEE
Q ss_conf 89759999200457388999999999789978--9999998
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMT--VSILTFS 54 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~--V~~~~la 54 (59)
+|++||||||+++||.|+.++.+.+++.|++. |.++++.
T Consensus 115 ~g~rVlIVDDvi~TGgT~~aa~~ll~~~Ga~v~~v~v~vli 155 (181)
T d1l1qa_ 115 PHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLY 155 (181)
T ss_dssp TTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred CCCEEEEEHHHHHHCHHHHHHHHHHHHCCCCEEEEEEEEEE
T ss_conf 79746774356663579999999999879956789999999
No 27
>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.25 E-value=8e-07 Score=55.82 Aligned_cols=40 Identities=28% Similarity=0.472 Sum_probs=37.2
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 2897599992004573889999999997899789999998
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59)
.+|++|+||||++|||.|+.++++.++++|+..+.++++.
T Consensus 113 ~~G~~VlvVeDviTTG~S~~~ai~~l~~~g~~V~~~~viv 152 (208)
T d2aeea1 113 LKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIF 152 (208)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCCEEEEEHHHHHHCCCHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 6897799856654411558889999997699798999999
No 28
>d1lh0a_ c.61.1.1 (A:) Orotate PRTase {Salmonella typhimurium [TaxId: 90371]}
Probab=98.10 E-value=2.2e-06 Score=53.42 Aligned_cols=40 Identities=23% Similarity=0.334 Sum_probs=36.1
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 8975999920045738899999999978997899999983
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
.+.+|+||||++|||.++.++++.|++.|+..+.++|+.-
T Consensus 116 ~~~~VliVeDViTTGgS~~eaie~l~~~G~~V~~v~vivD 155 (213)
T d1lh0a_ 116 LQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLD 155 (213)
T ss_dssp CCSEEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCCEEEECCCHHHCCCHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 7775899704210040579999999974033405999985
No 29
>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {Escherichia coli [TaxId: 562]}
Probab=97.92 E-value=1.7e-06 Score=54.09 Aligned_cols=38 Identities=26% Similarity=0.288 Sum_probs=30.5
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 0028975999920045738899999999978997899999983
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
....||+|||||||++||.|+.++.+.|++ +.+++|..
T Consensus 75 ~~~~gk~VLiVDDI~dtG~Tl~~~~~~l~~-----~~~atl~~ 112 (150)
T d1nula_ 75 AEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFA 112 (150)
T ss_dssp CSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEE
T ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHHHC-----CCEEEEEE
T ss_conf 466898369997133551899999998531-----86799997
No 30
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]}
Probab=97.86 E-value=7.8e-06 Score=50.50 Aligned_cols=50 Identities=24% Similarity=0.337 Sum_probs=42.9
Q ss_pred ECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 25102100289759999200457388999999999789978999999830
Q gi|254780309|r 7 VPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 7 i~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
....++.++.+++|+|+|.++.||.|+..+.+.|+++|++++.++++--+
T Consensus 113 ~y~klP~~i~~~~villDPmlATG~s~~~ai~~L~~~G~~~I~~v~~iaa 162 (208)
T d1i5ea_ 113 YYVKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKFMCLIAA 162 (208)
T ss_dssp EEEECCTTTTTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEEECSEEC
T ss_pred EEEECCCCHHCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 76542765421868986826744666999999998679985899998615
No 31
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]}
Probab=97.81 E-value=1.6e-05 Score=48.83 Aligned_cols=48 Identities=19% Similarity=0.304 Sum_probs=41.7
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 102100289759999200457388999999999789978999999830
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
..++.++.++.|+|+|.++.||.|+..+.+.|+++|+++|.++++-.+
T Consensus 117 ~~lP~~i~~~~vil~DPmlATG~s~~~ai~~L~~~g~~~I~~v~~ias 164 (210)
T d1o5oa_ 117 AKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVALIAA 164 (210)
T ss_dssp EECCCCCTTCEEEEECSEESSSHHHHHHHHHHHHTTCCEEEEECSEEC
T ss_pred HHCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 027754358539987677556862899999998579984899999984
No 32
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]}
Probab=97.73 E-value=1.4e-05 Score=49.16 Aligned_cols=47 Identities=26% Similarity=0.383 Sum_probs=41.9
Q ss_pred HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 02100289759999200457388999999999789978999999830
Q gi|254780309|r 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 10 ~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.+++++.++.|+|+|.++.||.|+..+.+.|+++|++++.++++-.+
T Consensus 116 klP~~i~~~~vil~DPmlATG~s~~~ai~~L~~~gv~~I~~v~~ias 162 (208)
T d1v9sa1 116 KLPPDIAERRAFLLDPMLATGGSASLALSLLKERGATGVKLMAILAA 162 (208)
T ss_dssp ECCSCGGGSCEEEECSEESSSHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred ECCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf 55865345669996824533565999999998659984699999843
No 33
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]}
Probab=97.62 E-value=4.4e-05 Score=46.44 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=38.9
Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC--EEEEEEEE
Q ss_conf 510210028975999920045738899999999978997--89999998
Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAM--TVSILTFS 54 (59)
Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~--~V~~~~la 54 (59)
...++.++.++.|+|+|.++.||.|+..+.+.|+++|++ ++.++++-
T Consensus 128 y~klP~~i~~~~vil~DPmLATG~S~~~ai~~L~~~g~~~~~I~~v~~i 176 (224)
T d1bd3a_ 128 YEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNIL 176 (224)
T ss_dssp EEECCTTGGGSEEEEECSEESSCHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred HHHCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf 7348876245659986747715268999999999749975328999999
No 34
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.06 E-value=0.00024 Score=42.46 Aligned_cols=41 Identities=17% Similarity=0.150 Sum_probs=36.3
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 89759999200457388999999999789978999999830
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
+.++|+|+|.++.||.|+..+.+.|++.|++++.++++-.+
T Consensus 131 ~~~~VillDPmlATG~s~~~ai~~L~~~g~~~I~~~~~ias 171 (215)
T d1xtta1 131 KVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISS 171 (215)
T ss_dssp TTCEEEEECSEESSSHHHHHHHHHHGGGCCSEEEEECSEEE
T ss_pred CCCEEEEECCHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEC
T ss_conf 46337873805735265999999985049977999999854
No 35
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=75.93 E-value=2.1 Score=21.16 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=22.4
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 0028975999920045738899999999978997
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAM 46 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~ 46 (59)
++++|++||+|||--+ ......+.|+..|..
T Consensus 3 ~d~~g~rILvVDD~~~---~~~~l~~~L~~~G~~ 33 (134)
T d1dcfa_ 3 SNFTGLKVLVMDENGV---SRMVTKGLLVHLGCE 33 (134)
T ss_dssp CCCTTCEEEEECSCHH---HHHHHHHHHHHTTCE
T ss_pred CCCCCCEEEEEECCHH---HHHHHHHHHHHCCCE
T ss_conf 9899999999959999---999999999987999
No 36
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=64.13 E-value=5.1 Score=19.06 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=16.8
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 97599992004573889999999997899789
Q gi|254780309|r 17 GLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48 (59)
Q Consensus 17 gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V 48 (59)
||+||||||-- .........|.+.|...+
T Consensus 1 GkrILivDD~~---~~~~~l~~~L~~~g~~v~ 29 (118)
T d1u0sy_ 1 GKRVLIVDDAA---FMRMMLKDIITKAGYEVA 29 (118)
T ss_dssp CCEEEEECSCH---HHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEEECCH---HHHHHHHHHHHHCCCCEE
T ss_conf 99999996989---999999999997699669
No 37
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=62.19 E-value=2.9 Score=20.36 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=33.4
Q ss_pred CCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 510210028975999920045738899999999978997899999
Q gi|254780309|r 8 PQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 8 ~~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59)
......+++++.|++|- +|..-..+++.|...|++.+.++-
T Consensus 15 a~~~~~~l~~~~ilviG----aG~~g~~v~~~L~~~g~~~i~v~n 55 (159)
T d1gpja2 15 AERELGSLHDKTVLVVG----AGEMGKTVAKSLVDRGVRAVLVAN 55 (159)
T ss_dssp HHHHHSCCTTCEEEEES----CCHHHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHCCCCCCEEEEEC----CCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 99983870169699987----988999999999966985799975
No 38
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}
Probab=58.16 E-value=6.6 Score=18.47 Aligned_cols=39 Identities=31% Similarity=0.453 Sum_probs=30.0
Q ss_pred HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 1002897599992004573889999999997899789999998306
Q gi|254780309|r 12 SKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 12 ~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
...++||+|+|+ =+|.+..+++-.|.+.|+ +|++ +.|+.
T Consensus 13 ~~~~~~k~vlIl----GaGGaarai~~al~~~g~-~i~I--~nRt~ 51 (170)
T d1nyta1 13 SFIRPGLRILLI----GAGGASRGVLLPLLSLDC-AVTI--TNRTV 51 (170)
T ss_dssp TCCCTTCEEEEE----CCSHHHHHHHHHHHHTTC-EEEE--ECSSH
T ss_pred CCCCCCCEEEEE----CCCHHHHHHHHHHCCCCE-EEEE--CCCHH
T ss_conf 999789989998----975898999998615523-7973--13217
No 39
>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=55.86 E-value=7.2 Score=18.25 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=26.5
Q ss_pred HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 21002897599992004573889999999997899789999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
...+++||+|+|+ =+|.|.+.++..|.+.| +|+++
T Consensus 12 ~~~~~~~k~vlIl----GaGG~arai~~aL~~~~--~i~I~ 46 (177)
T d1nvta1 12 EIGRVKDKNIVIY----GAGGAARAVAFELAKDN--NIIIA 46 (177)
T ss_dssp HHCCCCSCEEEEE----CCSHHHHHHHHHHTSSS--EEEEE
T ss_pred HCCCCCCCEEEEE----CCCHHHHHHHHHHCCCC--CEEEE
T ss_conf 1898689989998----97599999999870453--03420
No 40
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}
Probab=54.81 E-value=7.5 Score=18.15 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=29.7
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 89759999200457388999999999789978999999830
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
++|+|+|+ =+|.+..+++..|.+.|+++|.++ .|+
T Consensus 16 ~~~~vlIl----GaGGaarai~~aL~~~g~~~I~I~--nR~ 50 (167)
T d1npya1 16 KNAKVIVH----GSGGMAKAVVAAFKNSGFEKLKIY--ARN 50 (167)
T ss_dssp TTSCEEEE----CSSTTHHHHHHHHHHTTCCCEEEE--CSC
T ss_pred CCCEEEEE----CCCHHHHHHHHHHHHCCCCEEEEE--CCC
T ss_conf 89969998----987899999999997799889996--332
No 41
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}
Probab=45.40 E-value=11 Score=17.31 Aligned_cols=36 Identities=11% Similarity=0.277 Sum_probs=31.4
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 0028975999920045738899999999978997899999
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59)
.+++||+|+|+- +|.+...++..|.+.|+++++++.
T Consensus 14 ~~l~~k~vlIlG----aGGaarai~~al~~~g~~~i~i~n 49 (182)
T d1vi2a1 14 FDIKGKTMVLLG----AGGASTAIGAQGAIEGLKEIKLFN 49 (182)
T ss_dssp CCCTTCEEEEEC----CSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCCCCEEEEEC----CCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 896799899989----748999999998644873676423
No 42
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=37.48 E-value=15 Score=16.61 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=28.4
Q ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 2897599992004573889999999997899789999
Q gi|254780309|r 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 15 i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
-+++++++++. +|.....++..|.+.|-+.|+.+
T Consensus 56 ~~~~~ivv~c~---~g~rs~~~a~~L~~~G~~~v~~l 89 (108)
T d1gmxa_ 56 DFDTPVMVMCY---HGNSSKGAAQYLLQQGYDVVYSI 89 (108)
T ss_dssp CTTSCEEEECS---SSSHHHHHHHHHHHHTCSSEEEE
T ss_pred CCCCCCCCCCC---CCHHHHHHHHHHHHCCCCCEEEE
T ss_conf 24676232179---97489999999998499787997
No 43
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=34.47 E-value=16 Score=16.34 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=27.8
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 897599992004573889999999997899789999
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
++++|++++. +|.....++..|.+.|-..|+.+
T Consensus 81 ~~~~ivvyC~---~G~rs~~aa~~L~~~G~~nV~~l 113 (137)
T d1qxna_ 81 PEKPVVVFCK---TAARAALAGKTLREYGFKTIYNS 113 (137)
T ss_dssp TTSCEEEECC---SSSCHHHHHHHHHHHTCSCEEEE
T ss_pred CCCCEEEEEC---CCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 6655044414---31218999999997389847984
No 44
>d1uepa_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.34 E-value=11 Score=17.22 Aligned_cols=43 Identities=19% Similarity=0.266 Sum_probs=33.1
Q ss_pred C-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEC
Q ss_conf 2-897599992004573889999999997899789999998306
Q gi|254780309|r 15 V-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57 (59)
Q Consensus 15 i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~~ 57 (59)
+ .|-.|+=|++.-..|.|..++.+.|++.+......+.+.|..
T Consensus 53 L~~GD~Il~VNg~~v~~~t~~e~~~~l~~~~~~~~v~l~v~r~~ 96 (103)
T d1uepa_ 53 LHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKV 96 (103)
T ss_dssp CCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf 87687999899999889979999999984899998999997589
No 45
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=33.48 E-value=17 Score=16.25 Aligned_cols=28 Identities=29% Similarity=0.406 Sum_probs=17.7
Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 5999920045738899999999978997899
Q gi|254780309|r 19 KILLIDDVYTTGATAKCAAIALKKAGAMTVS 49 (59)
Q Consensus 19 ~vliVDDiitTG~T~~~~~~~L~~~ga~~V~ 49 (59)
+||||||--+ ......+.|.+.|...|.
T Consensus 8 kILiVDD~~~---~~~~l~~~L~~~g~~~v~ 35 (129)
T d1p6qa_ 8 KVLIVDDQVT---SRLLLGDALQQLGFKQIT 35 (129)
T ss_dssp CEEEECSSHH---HHHHHHHHHHTTTCSCEE
T ss_pred EEEEEECCHH---HHHHHHHHHHHCCCEEEE
T ss_conf 8999979899---999999999987994999
No 46
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}
Probab=32.11 E-value=18 Score=16.12 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=28.7
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 00289759999200457388999999999789978999999830
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
..++||+|+|+ =+|.+...++..|.+ ++++|+++ .|+
T Consensus 14 ~~~~~k~vlIl----GaGGaarai~~aL~~-~~~~i~I~--nR~ 50 (171)
T d1p77a1 14 WLRPNQHVLIL----GAGGATKGVLLPLLQ-AQQNIVLA--NRT 50 (171)
T ss_dssp CCCTTCEEEEE----CCSHHHHTTHHHHHH-TTCEEEEE--ESS
T ss_pred CCCCCCEEEEE----CCCHHHHHHHHHHCC-CCCEEEEC--CCH
T ss_conf 98789979998----973999999998704-67456523--633
No 47
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=31.59 E-value=17 Score=16.18 Aligned_cols=33 Identities=21% Similarity=0.150 Sum_probs=28.1
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 897599992004573889999999997899789999
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
++++|+++. .+|.....++..|.+.|-.+|+.+
T Consensus 71 ~~~~iv~~C---~~G~rs~~a~~~L~~~G~~nv~~l 103 (119)
T d1tq1a_ 71 QSDNIIVGC---QSGGRSIKATTDLLHAGFTGVKDI 103 (119)
T ss_dssp TTSSEEEEE---SSCSHHHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEEC---CCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 986799971---786709999999986666884990
No 48
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.69 E-value=20 Score=15.89 Aligned_cols=42 Identities=24% Similarity=0.222 Sum_probs=29.8
Q ss_pred HHHCCCCCEEEEEEECCCCC----HHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 21002897599992004573----8899999999978997899999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTG----ATAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG----~T~~~~~~~L~~~ga~~V~~~~ 52 (59)
....++|++|+||-.....- .-+--++..+++.||++|..+.
T Consensus 45 i~e~vrg~~V~ivqs~~~~~n~~lmeLll~~da~k~~~a~~It~Vi 90 (160)
T d2c4ka1 45 IKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVI 90 (160)
T ss_dssp ECSCCTTCCEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSCEEEEE
T ss_pred CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEC
T ss_conf 4766568824899516753077999999999999984745534402
No 49
>d1x6da1 b.36.1.2 (A:8-114) Interleukin 16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.94 E-value=22 Score=15.62 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=31.8
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 8975999920045738899999999978997899999983
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
.|-.|+=|+..-..|.|..++.+.|++.+...+..+...+
T Consensus 56 ~GD~Il~VNg~~v~~~~~~ea~~~l~~~~~~~~l~v~~r~ 95 (107)
T d1x6da1 56 KGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRK 95 (107)
T ss_dssp TTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEEC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHCCCCCEEEEEEECC
T ss_conf 4779978899865899799999999728998899999789
No 50
>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=26.79 E-value=22 Score=15.60 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=29.0
Q ss_pred HHHCCCCCEEEEEEECCCC--CHH--HHHHHHHHHHCCCCEEEEEE
Q ss_conf 2100289759999200457--388--99999999978997899999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTT--GAT--AKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitT--G~T--~~~~~~~L~~~ga~~V~~~~ 52 (59)
....++|++|.||-..... -.- +--++..+++.||++|..+.
T Consensus 42 i~~~vrg~dv~ivqs~~~~~nd~lmelll~~~a~k~~~A~~i~~Vi 87 (159)
T d1dkua1 42 IEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVI 87 (159)
T ss_dssp ECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred EECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 6147788850898638888378999999999999975776207860
No 51
>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}
Probab=26.70 E-value=22 Score=15.59 Aligned_cols=39 Identities=23% Similarity=0.337 Sum_probs=30.8
Q ss_pred HCCCCCEEEE--------EEEC-----CCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 0028975999--------9200-----4573889999999997899789999
Q gi|254780309|r 13 KHVAGLKILL--------IDDV-----YTTGATAKCAAIALKKAGAMTVSIL 51 (59)
Q Consensus 13 ~~i~gk~vli--------VDDi-----itTG~T~~~~~~~L~~~ga~~V~~~ 51 (59)
.+++|++||| ||+| -.||.+=.++++.+..+|+....+.
T Consensus 2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~ 53 (223)
T d1u7za_ 2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVS 53 (223)
T ss_dssp CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 6557988999778875567882352627937999999999998698243241
No 52
>d2cssa1 b.36.1.1 (A:8-115) Regulating synaptic membrane exocytosis protein 1, RIMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.89 E-value=23 Score=15.51 Aligned_cols=41 Identities=20% Similarity=0.129 Sum_probs=32.3
Q ss_pred C-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 2-8975999920045738899999999978997899999983
Q gi|254780309|r 15 V-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 15 i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
+ .|-.|+=|++.-..|.|..++.+.|++..+.....+.++|
T Consensus 66 L~~GD~Il~VNg~~~~~~t~~ea~~~l~~~~~~~~v~l~v~R 107 (108)
T d2cssa1 66 LRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSR 107 (108)
T ss_dssp CCTTCEEEEESSCBCTTSCHHHHHHHHHHGGGCSCEEEEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf 775899999999998899899999999858999889999969
No 53
>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=24.80 E-value=24 Score=15.39 Aligned_cols=42 Identities=10% Similarity=0.213 Sum_probs=29.1
Q ss_pred HHHCCCCCEEEEEEECCCCCHHH---HHHHHHHHHCCCCEEEEEE
Q ss_conf 21002897599992004573889---9999999978997899999
Q gi|254780309|r 11 VSKHVAGLKILLIDDVYTTGATA---KCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 11 ~~~~i~gk~vliVDDiitTG~T~---~~~~~~L~~~ga~~V~~~~ 52 (59)
....+.|++|+++-.....--.+ --....+++.||++|..+.
T Consensus 41 i~~~vrg~~vvvi~s~~~~~d~lmelll~~da~~~~~a~~I~~Vi 85 (155)
T d1u9ya1 41 IVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGVKKITLVA 85 (155)
T ss_dssp ECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred ECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 345457865688705666563788999999999984786047840
No 54
>d1wifa_ b.36.1.1 (A:) hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.66 E-value=25 Score=15.38 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=31.7
Q ss_pred C-CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 2-8975999920045738899999999978997899999983
Q gi|254780309|r 15 V-AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 15 i-~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
| .|-.|+=||+.-..|.|..++.+.|+.......-.+.+.|
T Consensus 68 l~~GD~Il~Ing~~v~~~~~~e~~~llr~~~~g~~v~L~v~R 109 (126)
T d1wifa_ 68 LQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYR 109 (126)
T ss_dssp SCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEES
T ss_pred CCCCCEEEEECCEEEEECCHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf 999999887899991751199999998589999989999982
No 55
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=24.57 E-value=25 Score=15.37 Aligned_cols=25 Identities=24% Similarity=0.299 Sum_probs=10.4
Q ss_pred CEEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 7599992004573889999999997899
Q gi|254780309|r 18 LKILLIDDVYTTGATAKCAAIALKKAGA 45 (59)
Q Consensus 18 k~vliVDDiitTG~T~~~~~~~L~~~ga 45 (59)
|.||||||--+ ......+.|++.|.
T Consensus 4 k~ILiVdD~~~---~~~~l~~~L~~~g~ 28 (144)
T d1i3ca_ 4 KVILLVEDSKA---DSRLVQEVLKTSTI 28 (144)
T ss_dssp EEEEEECCCHH---HHHHHHHHHHSCCS
T ss_pred CEEEEEECCHH---HHHHHHHHHHHCCC
T ss_conf 88999979999---99999999998699
No 56
>d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]}
Probab=24.24 E-value=25 Score=15.33 Aligned_cols=26 Identities=23% Similarity=0.259 Sum_probs=11.2
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 97599992004573889999999997899
Q gi|254780309|r 17 GLKILLIDDVYTTGATAKCAAIALKKAGA 45 (59)
Q Consensus 17 gk~vliVDDiitTG~T~~~~~~~L~~~ga 45 (59)
+|.||||||--. ......+.|.+.|.
T Consensus 2 ~krILiVDD~~~---~~~~l~~~L~~~g~ 27 (140)
T d1k68a_ 2 HKKIFLVEDNKA---DIRLIQEALANSTV 27 (140)
T ss_dssp CCEEEEECCCHH---HHHHHHHHHHTCSS
T ss_pred CCCEEEEECCHH---HHHHHHHHHHHCCC
T ss_conf 986999989999---99999999997699
No 57
>d1vaea_ b.36.1.1 (A:) Rhophilin-2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.16 E-value=26 Score=15.21 Aligned_cols=39 Identities=26% Similarity=0.141 Sum_probs=33.0
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 897599992004573889999999997899789999998
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFS 54 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~la 54 (59)
.|-.|+=|++.-..+.|..++.+.|+..+...|.+.++.
T Consensus 56 ~GD~Il~INg~~v~~~~~~ev~~llk~~~~~~v~l~v~~ 94 (111)
T d1vaea_ 56 EGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVS 94 (111)
T ss_dssp TTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEEC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHCCCCCEEEEEEEC
T ss_conf 662999999987589979999999975899828999977
No 58
>d1v7la_ c.8.2.1 (A:) Isopropylmalate isomerase LeuD {Pyrococcus horikoshii [TaxId: 53953]}
Probab=22.71 E-value=8.3 Score=17.92 Aligned_cols=47 Identities=23% Similarity=0.343 Sum_probs=39.5
Q ss_pred CHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 10210028975999920045738899999999978997899999983
Q gi|254780309|r 9 QYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55 (59)
Q Consensus 9 ~~~~~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar 55 (59)
|+.....+.-+|++-.+-+=.|++=.+++..|+..|.+.|..-++||
T Consensus 43 p~f~~~~~~g~IlVaG~nfG~GSSRE~A~~al~~~Gi~aVIA~SFar 89 (162)
T d1v7la_ 43 PDFARNVRPGDVVVAGKNFGIGSSRESAALALKALGIAGVIAESFGR 89 (162)
T ss_dssp TTHHHHCCTTCEEECCSSBTBSCCCTHHHHHHHHHTCCEEEESCBCH
T ss_pred CHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHCCEEEEEEHHHHH
T ss_conf 51554143566899844334577652466778755575575313568
No 59
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=21.66 E-value=28 Score=15.04 Aligned_cols=25 Identities=20% Similarity=0.379 Sum_probs=11.6
Q ss_pred CEEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 7599992004573889999999997899
Q gi|254780309|r 18 LKILLIDDVYTTGATAKCAAIALKKAGA 45 (59)
Q Consensus 18 k~vliVDDiitTG~T~~~~~~~L~~~ga 45 (59)
|.||||||--+. .......|.+.|.
T Consensus 1 KkILiVDD~~~~---~~~l~~~L~~~g~ 25 (121)
T d1zesa1 1 RRILVVEDEAPI---REMVCFVLEQNGF 25 (121)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHTTC
T ss_pred CEEEEEECCHHH---HHHHHHHHHHCCC
T ss_conf 989999689999---9999999998799
No 60
>d1m0sa1 c.124.1.4 (A:1-126,A:199-219) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Haemophilus influenzae [TaxId: 727]}
Probab=21.64 E-value=23 Score=15.56 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=24.6
Q ss_pred HCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf 00289759999200457388999999999789978999
Q gi|254780309|r 13 KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50 (59)
Q Consensus 13 ~~i~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~ 50 (59)
..++...++.+ ++|+|..++++.|.+.....+..
T Consensus 16 ~lI~dg~~I~L----dsGTT~~~la~~L~~~~~~~~v~ 49 (147)
T d1m0sa1 16 QYVKADRIVGV----GSGSTVNCFIEALGTIKDKIQGA 49 (147)
T ss_dssp GGCCTTSEEEE----CCSHHHHHHHHHHHTTGGGSCEE
T ss_pred HHCCCCCEEEE----CCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 76899999998----88636999999987515643661
No 61
>d1ujva_ b.36.1.1 (A:) Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.80 E-value=30 Score=14.94 Aligned_cols=43 Identities=16% Similarity=0.096 Sum_probs=33.2
Q ss_pred CCC-CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf 028-9759999200457388999999999789978999999830
Q gi|254780309|r 14 HVA-GLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRS 56 (59)
Q Consensus 14 ~i~-gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~lar~ 56 (59)
.++ |-.|+=||+.-..|.|..++.+.|++........+.+.|.
T Consensus 47 ~L~~GD~Il~VNg~~v~~~t~~evv~~lk~~~~g~~v~l~v~R~ 90 (96)
T d1ujva_ 47 GLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRG 90 (96)
T ss_dssp TCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEEC
T ss_conf 88899999999798978997999999997299999899999889
No 62
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=20.65 E-value=30 Score=14.92 Aligned_cols=33 Identities=21% Similarity=0.219 Sum_probs=27.5
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 8975999920045738899999999978997899999
Q gi|254780309|r 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52 (59)
Q Consensus 16 ~gk~vliVDDiitTG~T~~~~~~~L~~~ga~~V~~~~ 52 (59)
.+++|++| =.|.|...++..+...||++|+++.
T Consensus 44 ~~~kVvVI----GGGdtA~D~A~~a~r~GA~~V~vi~ 76 (153)
T d1gtea3 44 IRGAVIVL----GAGDTAFDCATSALRCGARRVFLVF 76 (153)
T ss_dssp CCSEEEEE----CSSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEE----CCCHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 79879998----8885399999999876774115999
Done!