RPS-BLAST 2.2.22 [Sep-27-2009]
Database: CddB
21,608 sequences; 5,994,473 total letters
Searching..................................................done
Query= gi|254780309|ref|YP_003064722.1| comF family protein
[Candidatus Liberibacter asiaticus str. psy62]
(59 letters)
>gnl|CDD|161762 TIGR00201, comF, comF family protein. This protein is found in
species that do (Bacillus subtilis, Haemophilus
influenzae) or do not (E. coli, Borrelia burgdorferi)
have described systems for natural transformation with
exogenous DNA. It is involved in competence for
transformation in Bacillus subtilis.
Length = 190
Score = 43.3 bits (102), Expect = 1e-05
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 1 MRNAFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSR 55
+ NAF++ + G I+L+DDV TTGAT A L + GA +V + T +R
Sbjct: 139 LENAFDLK---NNSFQGRNIVLVDDVVTTGATLHEIARLLLELGAASVQVWTLAR 190
>gnl|CDD|183221 PRK11595, PRK11595, DNA utilization protein GntX; Provisional.
Length = 227
Score = 40.8 bits (96), Expect = 8e-05
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 1 MRNAFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSL 57
++NAF + V G + ++DDV TTG+T A L + GA +V + R+L
Sbjct: 175 LKNAFRLELPVQ----GQHMAIVDDVVTTGSTVAEIAQLLLRNGAASVQVWCLCRTL 227
>gnl|CDD|179411 PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.
Length = 175
Score = 37.4 bits (88), Expect = 9e-04
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 16 AGLKILLIDDVYTTGATAKCAAIALKKAGA 45
G ++L++DD+ TG T + A L++ GA
Sbjct: 113 PGDRVLIVDDLLATGGTLEAAIKLLERLGA 142
>gnl|CDD|172342 PRK13811, PRK13811, orotate phosphoribosyltransferase; Provisional.
Length = 170
Score = 34.0 bits (78), Expect = 0.008
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52
V G ++LL++DV T+G +A L+ AGA+ ++T
Sbjct: 102 VKGKRVLLVEDVTTSGGSALYGIEQLRAAGAVVDDVVT 139
>gnl|CDD|179425 PRK02458, PRK02458, ribose-phosphate pyrophosphokinase;
Provisional.
Length = 323
Score = 33.9 bits (78), Expect = 0.010
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 10 YVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGA 45
Y+ VAG K +LIDD+ TG T AA +++ GA
Sbjct: 211 YIIGDVAGKKAILIDDILNTGKTFAEAAKIVEREGA 246
>gnl|CDD|179535 PRK03092, PRK03092, ribose-phosphate pyrophosphokinase;
Provisional.
Length = 304
Score = 33.0 bits (76), Expect = 0.016
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 6 NVPQYVSKH-----VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50
VP V + V G +L+DD+ TG T A ALK+AGA V I
Sbjct: 185 TVPNQVVANRVVGDVEGRTCVLVDDMIDTGGTIAGAVRALKEAGAKDVII 234
>gnl|CDD|179036 PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.
Length = 202
Score = 33.2 bits (77), Expect = 0.017
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGA 45
+ G ++L+++DV TTG + A A++ AGA
Sbjct: 111 LFGKRVLVVEDVITTGGSVLEAVEAIRAAGA 141
>gnl|CDD|167353 PRK02269, PRK02269, ribose-phosphate pyrophosphokinase;
Provisional.
Length = 320
Score = 32.1 bits (73), Expect = 0.031
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48
V G K +LIDD+ T T AA AL +AGA V
Sbjct: 215 VKGKKCILIDDMIDTAGTICHAADALAEAGATEV 248
>gnl|CDD|180913 PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional.
Length = 484
Score = 30.8 bits (70), Expect = 0.079
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58
VS V G +++++DD G T++ LK+AGA V + S LK
Sbjct: 344 VSGVVKGKRVVMVDDSIVRGTTSRRIVQLLKEAGAKEVHVAIASPELK 391
>gnl|CDD|179404 PRK02277, PRK02277, orotate phosphoribosyltransferase-like protein;
Provisional.
Length = 200
Score = 31.0 bits (71), Expect = 0.079
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50
V G + +++DDV T+G T K LK+ G V++
Sbjct: 137 SVEGKRCVIVDDVITSGTTMKETIEYLKEHGGKPVAV 173
>gnl|CDD|177930 PLN02293, PLN02293, adenine phosphoribosyltransferase.
Length = 187
Score = 30.4 bits (69), Expect = 0.095
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 16 AGLKILLIDDVYTTGATAKCAAIAL-KKAGAMTV 48
G + L+IDD+ TG T CAAI L ++AGA V
Sbjct: 124 PGERALVIDDLIATGGTL-CAAINLLERAGAEVV 156
>gnl|CDD|179265 PRK01259, PRK01259, ribose-phosphate pyrophosphokinase;
Provisional.
Length = 309
Score = 30.1 bits (69), Expect = 0.13
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50
V G +L+DD+ T T AA ALK+ GA +V
Sbjct: 206 VEGRDCILVDDMIDTAGTLCKAAEALKERGAKSVYA 241
>gnl|CDD|180357 PRK06031, PRK06031, phosphoribosyltransferase; Provisional.
Length = 233
Score = 30.1 bits (68), Expect = 0.14
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 14 HVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50
+ G ++ LIDDV ++GA+ L G I
Sbjct: 151 LLEGRRVALIDDVISSGASIVAGLRLLAACGIEPAGI 187
>gnl|CDD|129436 TIGR00336, pyrE, orotate phosphoribosyltransferase. The conserved
Lys (K) residue at position 101 of the seed alignment
has been proposed as the active site for the enzyme.
Length = 173
Score = 29.7 bits (67), Expect = 0.16
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 17 GLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51
G K+++++DV TTG + A ++ AG ++
Sbjct: 108 GDKVVVVEDVITTGTSILEAVEIIQAAGGQVAGVI 142
>gnl|CDD|162198 TIGR01090, apt, adenine phosphoribosyltransferase. A phylogenetic
analysis suggested omitting the bi-directional best hit
homologs from the spirochetes from the seed for this
model and making only tentative predictions of adenine
phosphoribosyltransferase function for this lineage.
Length = 169
Score = 29.9 bits (68), Expect = 0.16
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50
G ++L++DD+ TG TA+ ++K G V
Sbjct: 108 PGQRVLIVDDLLATGGTAEATDELIRKLGGEVVEA 142
>gnl|CDD|177882 PLN02238, PLN02238, hypoxanthine phosphoribosyltransferase.
Length = 189
Score = 29.6 bits (67), Expect = 0.17
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTF 53
V G +LL++D+ TG T L+ GA +VS+
Sbjct: 95 VKGKHVLLVEDIVDTGNTLSALVAHLEAKGAASVSVCAL 133
>gnl|CDD|179172 PRK00934, PRK00934, ribose-phosphate pyrophosphokinase;
Provisional.
Length = 285
Score = 29.1 bits (66), Expect = 0.27
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48
V G +L++DD+ +TG T A LK+ GA V
Sbjct: 202 VKGKDVLIVDDIISTGGTMATAIKILKEQGAKKV 235
>gnl|CDD|180262 PRK05793, PRK05793, amidophosphoribosyltransferase; Provisional.
Length = 469
Score = 28.8 bits (65), Expect = 0.31
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58
V G +++LIDD G T+K L+KAGA V S +K
Sbjct: 351 VEGKRVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSSPPVK 394
>gnl|CDD|136048 PRK06781, PRK06781, amidophosphoribosyltransferase; Provisional.
Length = 471
Score = 28.8 bits (64), Expect = 0.33
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLK 58
V G ++++IDD G T+K L++AGA V + S LK
Sbjct: 346 VEGKRVVMIDDSIVRGTTSKRIVRMLREAGATEVHVRIASPPLK 389
>gnl|CDD|162319 TIGR01367, pyrE_Therm, orotate phosphoribosyltransferase, Thermus
family. This model represents a distinct clade of
orotate phosphoribosyltransferases. Members include the
experimentally determined example from Thermus aquaticus
and additional examples from Caulobacter crescentus,
Helicobacter pylori, Mesorhizobium loti, and related
species.
Length = 187
Score = 28.6 bits (64), Expect = 0.38
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 17 GLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48
G K + ++DV TTG + A A++ G V
Sbjct: 105 GEKFVAVEDVVTTGGSLLEAIRAIEGQGGQVV 136
>gnl|CDD|130318 TIGR01251, ribP_PPkin, ribose-phosphate pyrophosphokinase. In some
systems, close homologs lacking enzymatic activity exist
and perform regulatory functions. The model is
designated subfamily rather than equivalog for this
reason.
Length = 308
Score = 28.4 bits (64), Expect = 0.38
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48
V G ++++DD+ TG T AA LK AGA V
Sbjct: 208 VEGKDVVIVDDIIDTGGTIAKAAEILKSAGAKRV 241
>gnl|CDD|181395 PRK08341, PRK08341, amidophosphoribosyltransferase; Provisional.
Length = 442
Score = 28.3 bits (63), Expect = 0.46
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50
V + + G +++L+DD G T K L+ AGA V +
Sbjct: 328 VREVINGKRVVLVDDSIVRGTTMKRIVKMLRDAGAREVHV 367
>gnl|CDD|180928 PRK07322, PRK07322, adenine phosphoribosyltransferase; Provisional.
Length = 178
Score = 28.4 bits (64), Expect = 0.46
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 12 SKHVAGLK---ILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51
LK + ++DDV +TG T +++AG V+
Sbjct: 112 GADAEKLKGKRVAIVDDVVSTGGTLTALERLVERAGGQVVAKA 154
>gnl|CDD|181061 PRK07631, PRK07631, amidophosphoribosyltransferase; Provisional.
Length = 475
Score = 27.5 bits (61), Expect = 0.78
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50
V G +++++DD G T++ L++AGA V +
Sbjct: 346 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHV 381
>gnl|CDD|179893 PRK04923, PRK04923, ribose-phosphate pyrophosphokinase;
Provisional.
Length = 319
Score = 27.6 bits (61), Expect = 0.82
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48
V G +L+DD+ T T AA ALK+ GA+ V
Sbjct: 215 VQGKTCVLVDDLVDTAGTLCAAAAALKQRGALKV 248
>gnl|CDD|184342 PRK13812, PRK13812, orotate phosphoribosyltransferase; Provisional.
Length = 176
Score = 27.1 bits (60), Expect = 0.96
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 17 GLKILLIDDVYTTGATAKCAAIALKKAGA 45
G ++++++D+ TTG +A A AL++AGA
Sbjct: 107 GEEVVVLEDIATTGQSAVDAVEALREAGA 135
>gnl|CDD|179476 PRK02812, PRK02812, ribose-phosphate pyrophosphokinase;
Provisional.
Length = 330
Score = 26.6 bits (59), Expect = 1.3
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 2 RNAFNVPQY--VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48
R A NV + V V G +L+DD+ TG T A L+K GA V
Sbjct: 213 RQAHNVAEVLNVIGDVKGKTAILVDDMIDTGGTICEGARLLRKEGAKQV 261
>gnl|CDD|185478 PTZ00145, PTZ00145, phosphoribosylpyrophosphate synthetase;
Provisional.
Length = 439
Score = 26.8 bits (59), Expect = 1.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48
V ++++DD+ T T AA LKK GA V
Sbjct: 333 VYDSDVIIVDDMIDTSGTLCEAAKQLKKHGARRV 366
>gnl|CDD|179447 PRK02597, rpoC2, DNA-directed RNA polymerase subunit beta';
Provisional.
Length = 1331
Score = 26.5 bits (59), Expect = 1.5
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 22 LIDDVY--TTGATAKCAAIALKKAG 44
LIDD Y TG K A + +KKAG
Sbjct: 582 LIDDRYRTKTGGLVKYAGLEVKKAG 606
>gnl|CDD|179062 PRK00553, PRK00553, ribose-phosphate pyrophosphokinase;
Provisional.
Length = 332
Score = 26.4 bits (58), Expect = 1.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 2 RNAFNVPQYVS--KHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSIL 51
R NV + ++ V L++DD+ TG T AA LKK A V ++
Sbjct: 201 RPKHNVAESINVLGEVKNKNCLIVDDMIDTGGTVIAAAKLLKKQKAKKVCVM 252
>gnl|CDD|180940 PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional.
Length = 500
Score = 26.2 bits (58), Expect = 2.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48
AG +I+++DD G T++ AL+ AGA V
Sbjct: 376 AGKRIIIVDDSIVRGTTSRKIVKALRDAGATEV 408
>gnl|CDD|161687 TIGR00065, ftsZ, cell division protein FtsZ. This family consists
of cell division protein FtsZ, a GTPase found in
bacteria, the chloroplast of plants, and in
archaebacteria. Structurally similar to tubulin, FtsZ
undergoes GTP-dependent polymerization into filaments
that form a cytoskeleton involved in septum synthesis.
Length = 349
Score = 26.1 bits (58), Expect = 2.2
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 29 TGATAKCAAIALKKAGAMTVSILTF 53
TGA A IA K+ GA+TV+++T
Sbjct: 117 TGAAPVVAKIA-KELGALTVAVVTK 140
>gnl|CDD|180877 PRK07199, PRK07199, phosphoribosylpyrophosphate synthetase;
Provisional.
Length = 301
Score = 25.7 bits (57), Expect = 2.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 16 AGLKILLIDDVYTTGATAKCAAIALKKAGA 45
AG +L+DD+ +TG T AA L+ AGA
Sbjct: 210 AGRTPVLVDDIVSTGRTLIEAARQLRAAGA 239
>gnl|CDD|181456 PRK08525, PRK08525, amidophosphoribosyltransferase; Provisional.
Length = 445
Score = 25.8 bits (57), Expect = 2.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILTFSRSLKD 59
+SK + G +I++IDD G T+K L+ AGA + + +K
Sbjct: 334 MSKVLEGKRIVVIDDSIVRGTTSKKIVSLLRAAGAKEIHLRIACPEIKF 382
>gnl|CDD|162324 TIGR01372, soxA, sarcosine oxidase, alpha subunit family,
heterotetrameric form. This model describes the alpha
subunit of a family of known and putative
heterotetrameric sarcosine oxidases. Five operons of
such oxidases are found in Mesorhizobium loti and three
in Agrobacterium tumefaciens, a high enough copy number
to suggest that not all members are share the same
function. The model is designated as subfamily rather
than equivalog for this reason.Sarcosine oxidase
catalyzes the oxidative demethylation of sarcosine to
glycine. The reaction converts tetrahydrofolate to
5,10-methylene-tetrahydrofolate. The enzyme is known in
monomeric and heterotetrameric (alpha,beta,gamma,delta)
forms.
Length = 985
Score = 25.5 bits (56), Expect = 3.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 26 VYTTGATAKCAAIALKKAGAMTVSI 50
V T +A AA L AG V+I
Sbjct: 322 VATNNDSAYRAAADLLAAGIAVVAI 346
>gnl|CDD|102351 PRK06388, PRK06388, amidophosphoribosyltransferase; Provisional.
Length = 474
Score = 24.9 bits (54), Expect = 4.6
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 11 VSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSI 50
+ + ++G +I+L+DD G T + ++K GA V +
Sbjct: 350 IREVISGKRIVLVDDSIVRGNTMRFIVKIMRKYGAKEVHV 389
>gnl|CDD|178274 PLN02669, PLN02669, xylulokinase.
Length = 556
Score = 24.7 bits (54), Expect = 5.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 32 TAKCAAIALKKAGAMTVSILTFSRSLK 58
T +C I GA +S LT SR+ +
Sbjct: 144 TKQCREIEEAVGGAAELSKLTGSRAYE 170
>gnl|CDD|178843 PRK00075, cbiD, cobalt-precorrin-6A synthase; Reviewed.
Length = 361
Score = 24.8 bits (55), Expect = 5.1
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Query: 27 YTTGATA----KCAAIALKKAGAM-TVSILT 52
YTTG+ A K A +AL TV I
Sbjct: 13 YTTGSCAAAAAKAALLALLTGEFPDTVEIDL 43
>gnl|CDD|179963 PRK05205, PRK05205, bifunctional pyrimidine regulatory protein PyrR
uracil phosphoribosyltransferase; Provisional.
Length = 176
Score = 24.7 bits (55), Expect = 5.3
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAI 38
+ G +++L+DDV TG T + AA+
Sbjct: 93 IEGKRVILVDDVLYTGRTIR-AAL 115
>gnl|CDD|181466 PRK08558, PRK08558, adenine phosphoribosyltransferase; Provisional.
Length = 238
Score = 24.6 bits (54), Expect = 5.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 16 AGLKILLIDDVYTTGATAKCAAIALKKAGAMTVSILT 52
G ++L++DD+ +G T + ++AGA V +
Sbjct: 175 KGDRVLIVDDIIRSGETQRALLDLARQAGADVVGVFF 211
>gnl|CDD|177934 PLN02297, PLN02297, ribose-phosphate pyrophosphokinase.
Length = 326
Score = 24.6 bits (54), Expect = 5.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 16 AGLKILLIDDVYTTGAT-AKCAAIALKKAGAMTVS 49
AG ++++DD+ +G T +C + L GA VS
Sbjct: 229 AGRHVVIVDDLVQSGGTLIECQKV-LAAHGAAKVS 262
>gnl|CDD|177997 PLN02369, PLN02369, ribose-phosphate pyrophosphokinase.
Length = 302
Score = 24.3 bits (53), Expect = 6.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 15 VAGLKILLIDDVYTTGATAKCAAIALKKAGAMTV 48
V G +++DD+ T T A L + GA V
Sbjct: 200 VKGKVAIMVDDMIDTAGTITKGAALLHQEGAREV 233
>gnl|CDD|180714 PRK06827, PRK06827, phosphoribosylpyrophosphate synthetase;
Provisional.
Length = 382
Score = 24.5 bits (54), Expect = 6.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 2 RNAFNVPQYVSKHVAGLKILLIDDVYTTGATAKCAAIALKKAGA 45
RN +++ + V G +L++DD+ +G + AA LK GA
Sbjct: 249 RNPIVAHEFLGRDVEGKDVLIVDDMIASGGSMIDAAKELKSRGA 292
Database: CddB
Posted date: Feb 4, 2011 9:54 PM
Number of letters in database: 5,994,473
Number of sequences in database: 21,608
Lambda K H
0.322 0.131 0.361
Gapped
Lambda K H
0.267 0.0728 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 882,549
Number of extensions: 39160
Number of successful extensions: 144
Number of sequences better than 10.0: 1
Number of HSP's gapped: 144
Number of HSP's successfully gapped: 59
Length of query: 59
Length of database: 5,994,473
Length adjustment: 31
Effective length of query: 28
Effective length of database: 5,324,625
Effective search space: 149089500
Effective search space used: 149089500
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.0 bits)