BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780310|ref|YP_003064723.1| hypothetical protein CLIBASIA_00975 [Candidatus Liberibacter asiaticus str. psy62] (119 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780310|ref|YP_003064723.1| hypothetical protein CLIBASIA_00975 [Candidatus Liberibacter asiaticus str. psy62] gi|254039987|gb|ACT56783.1| hypothetical protein CLIBASIA_00975 [Candidatus Liberibacter asiaticus str. psy62] Length = 119 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD Sbjct: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI Sbjct: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 >gi|315122266|ref|YP_004062755.1| competence protein F, putative [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495668|gb|ADR52267.1| competence protein F, putative [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 214 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/90 (61%), Positives = 73/90 (81%) Query: 30 IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89 +I+ RFCLC CWSKI+FI++ L+N + I++ PL+ +++DL L IRSV +YCD+S Sbjct: 1 MIDRRFCLCAFCWSKINFISSATQNLENIDNIINEKPLELLRQDLRLIPIRSVVVYCDIS 60 Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 CVLVRLLKYHDRTDLAIMMAQWMFRV +++ Sbjct: 61 CVLVRLLKYHDRTDLAIMMAQWMFRVGKEL 90 >gi|86136799|ref|ZP_01055377.1| competence protein F, putative [Roseobacter sp. MED193] gi|85826123|gb|EAQ46320.1| competence protein F, putative [Roseobacter sp. MED193] Length = 242 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 5/102 (4%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73 +YP C + F LCG CW + HFI+ T L ++D D + M Sbjct: 13 VYPPKCLGCDEFVEQDFGLCGGCWGEAHFISGTVCEGCGVPLPGDEDGYRLDCDECMSMS 72 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P +Q R+ LY D + LV LK+ DRTDLA A W+ R Sbjct: 73 RPWSQGRAAMLYKDKARNLVMALKHGDRTDLAAPAAGWIERA 114 >gi|126738463|ref|ZP_01754168.1| competence protein F, putative [Roseobacter sp. SK209-2-6] gi|126720262|gb|EBA16968.1| competence protein F, putative [Roseobacter sp. SK209-2-6] Length = 242 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73 IYP C ++ F LCG CW + HFI+ T L D + + M Sbjct: 13 IYPPRCLGCDELVEQDFGLCGTCWGQTHFISGTVCEGCGIPLPGEGDGYHLECDECMSTP 72 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P +Q R+ LY D + LV LK+ DRTDLA A W+ R Sbjct: 73 RPWSQGRAAMLYKDKARSLVMALKHGDRTDLAAPAAHWIERA 114 >gi|90420200|ref|ZP_01228108.1| competence protein F [Aurantimonas manganoxydans SI85-9A1] gi|90335534|gb|EAS49284.1| competence protein F [Aurantimonas manganoxydans SI85-9A1] Length = 249 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPL 67 +I + ++P +CP + +C CW K+ FI E + ++ K L Sbjct: 10 AITGSIGRLLFPPVCPGCQAAVTGSGTVCCACWPKLRFIERPYCEVLGLPFAYDLGKGFL 69 Query: 68 --KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++ + P ++R+ LY D++ LV LKY DRTDL +MA WM R ++ Sbjct: 70 SAEAIAEPPPFARLRAAVLYEDLAARLVSSLKYADRTDLVPLMAGWMTRAGAEL 123 >gi|304394136|ref|ZP_07376059.1| competence protein F [Ahrensia sp. R2A130] gi|303293576|gb|EFL87953.1| competence protein F [Ahrensia sp. R2A130] Length = 273 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 4/106 (3%) Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKD 73 I+P++C R ++ + LC CW ++ FI + + D +++ Sbjct: 36 AIWPAVCLACERPVDKQGSLCPTCWGEMRFIERPYCAVMGSPFTYDLGEGALSAEAIADP 95 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + RSV LY D++ +V LK+ DRT+LA MAQWM R + + Sbjct: 96 PPFDRCRSVVLYDDVARRMVSSLKFSDRTELAPWMAQWMVRASDGM 141 >gi|319781332|ref|YP_004140808.1| phosphoribosyltransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167220|gb|ADV10758.1| phosphoribosyltransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 266 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 20/125 (16%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA----------TE 52 I +S++ ++P +C R ++ LCG CW K+ + T Sbjct: 12 GITNLARSVVGWPARMLFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTH 71 Query: 53 HILKN--NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 H+ + + + I P P + R+ Y ++ +V+ LKY DRTDLA MA+ Sbjct: 72 HMGEGFLSAEAIADPP--------PFERARAAVAYSGVARQMVQGLKYQDRTDLAPWMAR 123 Query: 111 WMFRV 115 WM R Sbjct: 124 WMMRA 128 >gi|159185776|ref|NP_357098.2| competence protein F [Agrobacterium tumefaciens str. C58] gi|159140910|gb|AAK89883.2| competence protein F [Agrobacterium tumefaciens str. C58] Length = 263 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 18/126 (14%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-----------ATE 52 + +++ F +YP C +R+ LC CW + FI A + Sbjct: 18 VPSAARAVARSFFRLVYPPTCAGCNRMTGGEGALCPDCWRDVAFIDRPFCEVLGIPFARD 77 Query: 53 HILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 H DP P ++RSV + + LV LKY DRTDLA ++A WM Sbjct: 78 HGEGVVSGRAIADPP-------PFDRLRSVASHEGTARKLVHRLKYQDRTDLARLIALWM 130 Query: 113 FRVLEK 118 R + Sbjct: 131 LRASDG 136 >gi|163867840|ref|YP_001609044.1| competence protein ComF [Bartonella tribocorum CIP 105476] gi|161017491|emb|CAK01049.1| competence protein ComF [Bartonella tribocorum CIP 105476] Length = 261 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Query: 10 SIIIELFHC-IYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDN 61 S IE F +YP ICP + ++ +C CW + FIT T + Sbjct: 16 SQFIERFKTMLYPPICPGCKQNVSTYGTICSECWKDLQFITKPYCPVMGTPFVCDMGDGF 75 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + + L+S P +++RSV ++ ++ LV LKY D +LA MA WM Sbjct: 76 LSGEALRS---SYPFSRVRSVIVHKGLARTLVTRLKYGDHIELASFMANWM 123 >gi|254464782|ref|ZP_05078193.1| competence protein F [Rhodobacterales bacterium Y4I] gi|206685690|gb|EDZ46172.1| competence protein F [Rhodobacterales bacterium Y4I] Length = 242 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 12/122 (9%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKN 57 A IQT S+I YP C ++ F LCG CWS + FI+ T L Sbjct: 4 AGIQTAVSLI-------YPPQCMGCGGLVGSDFGLCGTCWSGMSFISGTVCEGCGVPLPG 56 Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 D + ++ P +Q RS +Y LV LK+ DRT++A A W+ R + Sbjct: 57 EADGFRLECDSCLRHPRPWSQGRSALIYEGQGRKLVLALKHGDRTEIAQTAAVWLERAAQ 116 Query: 118 KI 119 + Sbjct: 117 PM 118 >gi|49475199|ref|YP_033240.1| competence protein comF [Bartonella henselae str. Houston-1] gi|49238004|emb|CAF27209.1| Competence protein comF [Bartonella henselae str. Houston-1] Length = 262 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 10/113 (8%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDP 66 L +YP ICP + ++ +C CW + FIT + + + Sbjct: 22 RLLTILYPPICPGCKQRVSAYGTICSECWKDLQFITKPYCPVMGVPFVYDMGDGFLSGE- 80 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++Q LP +++RSV ++ ++ LV LKY D +LA MA WM +I Sbjct: 81 --ALQNSLPFSRVRSVIVHKGVAQSLVTRLKYGDHVELASFMANWMVSAGREI 131 >gi|13472985|ref|NP_104552.1| hypothetical protein mll3453 [Mesorhizobium loti MAFF303099] gi|14023733|dbj|BAB50338.1| mll3453 [Mesorhizobium loti MAFF303099] Length = 240 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 20/109 (18%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITA----------TEHILKN--NKDNIDKDP 66 ++P +C R ++ LCG CW K+ + T H+ + + + I P Sbjct: 2 LFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTHHMGEGFLSAEAIADPP 61 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P + R+ Y ++ +V+ LKY DRTDLA MA+WM R Sbjct: 62 --------PFERARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMVRA 102 >gi|260467149|ref|ZP_05813327.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|259029073|gb|EEW30371.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] Length = 266 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 10/104 (9%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHF-------ITATEHILKNNKDNIDKDPLKSMQ 71 ++P +C R ++ LCG CW K+ + T + + + + ++ Sbjct: 28 LFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTHQMGEGFLSAE---AIA 84 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P + R+ Y ++ +V+ LKY DRTDLA MA+WM R Sbjct: 85 DPPPFDRARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMVRA 128 >gi|126730067|ref|ZP_01745879.1| Competence protein F [Sagittula stellata E-37] gi|126709447|gb|EBA08501.1| Competence protein F [Sagittula stellata E-37] Length = 237 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 8/107 (7%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATE-----HILKNNKDNIDK-DPLK 68 L +YP C ++ F LCG CW + FIT L ++ D Sbjct: 4 LVQLVYPPRCLSCGGLVETDFGLCGACWRETRFITGLACDVCGAPLPGESGTVEHCDDCL 63 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 ++ + P R+ +Y D+ LV LK+ DR D+A A+WM RV Sbjct: 64 TLAR--PWVGGRAALVYADVGRRLVLALKHGDRQDIAAPAAEWMARV 108 >gi|319407556|emb|CBI81206.1| competence protein ComF [Bartonella sp. 1-1C] Length = 247 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 10/112 (8%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKD 60 + +I L +YP C ++I++ +C CW + FIT T + Sbjct: 1 MNKLIKRLIKILYPPTCHGCAKIVSAYGTICSDCWQDLQFITKPYCPVMGTPFAYDMGEG 60 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + + ++Q P + +RS ++ ++ VL LKY DR +LA MA WM Sbjct: 61 FLSGE---AIQNPPPFSSLRSAVVHKGLARVLTTRLKYGDRLELAPFMANWM 109 >gi|319404563|emb|CBI78169.1| competence protein ComF [Bartonella rochalimae ATCC BAA-1498] Length = 247 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 10/109 (9%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNID 63 +I L +YP C ++I++ +C CW + FIT T + + Sbjct: 4 LIKRLIKILYPPTCHGCAKIVSAYGTICSDCWKDLQFITKPYCPVMGTPFAYDMGEGFLS 63 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + ++Q P + +RS ++ ++ VL LKY DR +LA MA WM Sbjct: 64 GE---AIQNPPPFSSLRSAVVHKGLARVLTTRLKYGDRLELAPFMANWM 109 >gi|227823196|ref|YP_002827168.1| putative competence protein F [Sinorhizobium fredii NGR234] gi|227342197|gb|ACP26415.1| putative competence protein F [Sinorhizobium fredii NGR234] Length = 281 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 4/101 (3%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSMQKDL 74 ++P +C R+ +C CW+ + I + + D P +++ Sbjct: 51 VFPPVCCGCGRLTGDAHAVCPSCWAGLRLIERPYCEILGSPFAFDPGPGAVSPQAIANPP 110 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 ++RS +L+ ++ LV LKY DRTDLA MMA+WM R Sbjct: 111 DFDRLRSASLHEGIARDLVHGLKYRDRTDLAPMMAEWMIRA 151 >gi|114704317|ref|ZP_01437225.1| hypothetical protein FP2506_05271 [Fulvimarina pelagi HTCC2506] gi|114539102|gb|EAU42222.1| hypothetical protein FP2506_05271 [Fulvimarina pelagi HTCC2506] Length = 249 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 24/115 (20%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFIT--------------ATEHILKNNKDNIDK 64 ++P IC I LC CWS++ FI E ++ Sbjct: 19 LFPPICTSCGIGIGKPAGLCSSCWSELRFIERPFCDILCLPFSYDPGEGVVS-------- 70 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 K++ P ++RSV LY D + LV LKY DR DL +MA WM R I Sbjct: 71 --AKAIAHPPPFEKLRSVVLYDDRARRLVSALKYRDRLDLVPLMAAWMVRAGRDI 123 >gi|121601823|ref|YP_988686.1| comF family protein [Bartonella bacilliformis KC583] gi|120614000|gb|ABM44601.1| comF family protein [Bartonella bacilliformis KC583] Length = 251 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----P 66 I L +YP CP I++ +C CW + FIT + D Sbjct: 8 FIKRLMAVVYPPTCPGCKVIVSAHGTICADCWKDLQFITKPYCPIMGIPFACDMGDGFLS 67 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 +++Q P +++RS + ++ L LKY DR +LA MA WM Sbjct: 68 GEALQTSYPFSRVRSAIAHKGLARTLTIRLKYGDRVELAQFMANWM 113 >gi|240850049|ref|YP_002971442.1| competence protein ComF [Bartonella grahamii as4aup] gi|240267172|gb|ACS50760.1| competence protein ComF [Bartonella grahamii as4aup] Length = 261 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 10/101 (9%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQ 71 +YP ICP + ++ +C CW + FIT T + + + L++ Sbjct: 26 LYPPICPGCKQNVSTYGTICSECWKDLQFITKPYCPVMGTPFVCDMGDGFLSGEALRNSH 85 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 P +++RS ++ ++ LV LKY D +LA MA WM Sbjct: 86 ---PFSRVRSAIVHKGLARALVTRLKYGDHIELASFMANWM 123 >gi|319408180|emb|CBI81833.1| competence protein ComF [Bartonella schoenbuchensis R1] Length = 247 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----P 66 I L +YP CP +I++ +C CW FIT + D Sbjct: 4 FIESLIKILYPPTCPGCKKIVSAYSTVCSDCWKDFQFITKPYCPVMGIPFAYDMGEGFLS 63 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 +++Q P +++RSV ++ ++ +L LKY DR +LA M+ WM Sbjct: 64 GEAIQASPPFSRVRSVVVHKGLARLLTIQLKYSDRLELARFMSNWM 109 >gi|255262559|ref|ZP_05341901.1| competence protein F [Thalassiobium sp. R2A62] gi|255104894|gb|EET47568.1| competence protein F [Thalassiobium sp. R2A62] Length = 239 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM------QK 72 +YP+ C ++ LCG CWS FIT D DP ++ Sbjct: 8 LYPTQCVSCDALVEGDTGLCGKCWSDTPFITGAVCGACGAPLIGDVDPEETAYCEACHAS 67 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P R+ TLY + LV LK+ DRTDL ++QWM R Sbjct: 68 PRPWLHGRAATLYSGNARRLVLALKHGDRTDLVPALSQWMARA 110 >gi|15966372|ref|NP_386725.1| hypothetical protein SMc02444 [Sinorhizobium meliloti 1021] gi|307313041|ref|ZP_07592668.1| phosphoribosyltransferase [Sinorhizobium meliloti BL225C] gi|307321047|ref|ZP_07600453.1| phosphoribosyltransferase [Sinorhizobium meliloti AK83] gi|15075643|emb|CAC47198.1| Putative competence protein F [Sinorhizobium meliloti 1021] gi|306893322|gb|EFN24102.1| phosphoribosyltransferase [Sinorhizobium meliloti AK83] gi|306899360|gb|EFN29994.1| phosphoribosyltransferase [Sinorhizobium meliloti BL225C] Length = 248 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 10/115 (8%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKD 60 ++ I + I+P +C R+ +C CW+ + FI + Sbjct: 7 LRRISAQAVDLIFPPVCSGCGRLTGYAHAVCASCWAGMPFIERPYCEVLGLPFAYDPGES 66 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + + + ++RSV ++ + LV LKY DRTDLA MMA+WM R Sbjct: 67 AVSPEAIANPPV---FDRLRSVAIHEGIVRDLVHGLKYRDRTDLAPMMAEWMIRA 118 >gi|327193402|gb|EGE60302.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli CNPAF512] Length = 258 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 42/109 (38%), Gaps = 20/109 (18%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT---------EHILKNN---KDNIDKDP 66 +YP C + LC CW+ I FI H L + I K P Sbjct: 28 LYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHDLGAGILSAEAIAKPP 87 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P ++RS + LV LKY DRTDLA MMA WM R Sbjct: 88 --------PFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 128 >gi|39933674|ref|NP_945950.1| phosphoribosyltransferase [Rhodopseudomonas palustris CGA009] gi|192289031|ref|YP_001989636.1| phosphoribosyltransferase [Rhodopseudomonas palustris TIE-1] gi|39647520|emb|CAE26041.1| possible competence protein F (COMF) [Rhodopseudomonas palustris CGA009] gi|192282780|gb|ACE99160.1| phosphoribosyltransferase [Rhodopseudomonas palustris TIE-1] Length = 271 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNI-DKDP-LKSMQK--DLPL-TQIRSVTLYCDMSCV 91 +C CWS++ FI A + K + D P + SMQ D P ++ R+ Y +++ V Sbjct: 56 VCAQCWSQLSFI-APPYCEKLGIPFVYDPGPGMLSMQAIADPPAYSRARAAVRYDEVAKV 114 Query: 92 LVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 LV LK+HDRTDLA M +WM R + + Sbjct: 115 LVHGLKFHDRTDLAPTMGRWMARAGQPL 142 >gi|218462813|ref|ZP_03502904.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli Kim 5] Length = 169 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 4/101 (3%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPL--KSMQKDL 74 +YP C + LC CWS I FI E + ++ L +++ Sbjct: 28 LYPPTCSVCGVSAGGHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAIANPP 87 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P ++RS + LV LKY DRTDLA MMA WM R Sbjct: 88 PFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 128 >gi|316932065|ref|YP_004107047.1| phosphoribosyltransferase [Rhodopseudomonas palustris DX-1] gi|315599779|gb|ADU42314.1| phosphoribosyltransferase [Rhodopseudomonas palustris DX-1] Length = 271 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 6/84 (7%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNI-DKDP-LKSMQK--DLPL-TQIRSVTLYCDMSCV 91 LC CWS++ FI A + K + D P + SMQ D P ++ R+ Y +++ Sbjct: 56 LCARCWSQLSFI-APPYCEKLGIPFVYDPGPGMLSMQAIADPPAYSRARAAVRYDEIAKA 114 Query: 92 LVRLLKYHDRTDLAIMMAQWMFRV 115 LV LK+HDRTDLA M +WM R Sbjct: 115 LVHGLKFHDRTDLAPTMGRWMARA 138 >gi|260431723|ref|ZP_05785694.1| competence protein F [Silicibacter lacuscaerulensis ITI-1157] gi|260415551|gb|EEX08810.1| competence protein F [Silicibacter lacuscaerulensis ITI-1157] Length = 254 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 5/106 (4%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73 +YP C + F LCG CW + FI L D + M++ Sbjct: 24 VYPPRCIGCGELTESDFGLCGPCWRETPFIGGLVCASCGVPLPGEDDGHRIECDDCMRQP 83 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P ++ R LY + LV K+ DRT+LA A+WM R + + Sbjct: 84 PPWSEGRGALLYKGKARALVLAFKHGDRTELARPAARWMARAGQSL 129 >gi|319899208|ref|YP_004159301.1| competence protein ComF [Bartonella clarridgeiae 73] gi|319403172|emb|CBI76731.1| competence protein ComF [Bartonella clarridgeiae 73] Length = 247 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 10/109 (9%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNID 63 +I L +YP IC ++I++ +C CW + FIT T + + Sbjct: 4 LIKRLITILYPPICHGCAKIVSAYGTICSDCWKDLQFITKPYCPVMGTPFAYDMGEGFLS 63 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + ++Q P + +RS ++ ++ LV LKY DR +LA MA M Sbjct: 64 GE---AIQNSPPFSSLRSAVVHKGLARTLVTRLKYGDRLELASFMANSM 109 >gi|86359347|ref|YP_471239.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli CFN 42] gi|86283449|gb|ABC92512.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli CFN 42] Length = 258 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 20/109 (18%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT---------EHILKNN---KDNIDKDP 66 +YP C + LC CWS I FI H L + I P Sbjct: 28 LYPPACSVCGISTGGHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAIANPP 87 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P ++RS + LV LKY DRTDLA MMA WM R Sbjct: 88 --------PFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 128 >gi|323139478|ref|ZP_08074526.1| phosphoribosyltransferase [Methylocystis sp. ATCC 49242] gi|322395280|gb|EFX97833.1| phosphoribosyltransferase [Methylocystis sp. ATCC 49242] Length = 254 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 9/125 (7%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNN 58 +P + + + +++L +YP C + + + LC CWS I FI E + Sbjct: 8 LPDLARRAGAALLDL---VYPPSCLVCRKAVAQNGALCAACWSDIAFIERPFCERLGTPF 64 Query: 59 KDNIDKDPLKSMQ--KDLPLT-QIRSVTLY-CDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + ++D+ L S + + P+ + R+V Y D + L LKY+DR +LA M +WM R Sbjct: 65 ERDLDQPGLISPEAAANPPVFHRARAVARYDSDKARSLAHRLKYYDRLELAGPMGRWMAR 124 Query: 115 VLEKI 119 I Sbjct: 125 AGADI 129 >gi|190893598|ref|YP_001980140.1| competence protein F (phosphoribosyltransferase) [Rhizobium etli CIAT 652] gi|190698877|gb|ACE92962.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli CIAT 652] Length = 258 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 14/106 (13%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT---------EHILKNNKDNIDKDPLKS 69 +YP C + LC CW+ I FI H L + + + Sbjct: 28 LYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHDLGAGIVSAE-----A 82 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + P ++RS + LV LKY DRTDLA MMA WM R Sbjct: 83 IANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 128 >gi|75674583|ref|YP_317004.1| phosphoribosyltransferase [Nitrobacter winogradskyi Nb-255] gi|74419453|gb|ABA03652.1| phosphoribosyltransferase [Nitrobacter winogradskyi Nb-255] Length = 271 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%) Query: 37 LCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89 +C CW+K+ FI T + + + ++++ + R+ Y D++ Sbjct: 56 VCADCWTKLSFIERPYCPRLGTPFVYDPGSEMLS---MEAIANPPAYQRARAAVRYDDVA 112 Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRV 115 VLV LKY DRTDLA +M +WM R Sbjct: 113 KVLVHALKYQDRTDLAPVMGRWMARA 138 >gi|92116101|ref|YP_575830.1| phosphoribosyltransferase [Nitrobacter hamburgensis X14] gi|91798995|gb|ABE61370.1| phosphoribosyltransferase [Nitrobacter hamburgensis X14] Length = 270 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 10/90 (11%) Query: 37 LCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89 +C CW+K+ FI T + + + ++++ + R+ Y D++ Sbjct: 55 VCADCWTKLSFIERPYCPRLGTPFVYDPGTNMLS---MEAIANPPAYQRARAAVRYDDVA 111 Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 VLV LKY DRTDLA M +WM R ++ Sbjct: 112 KVLVHALKYQDRTDLAPAMGRWMARAGTEL 141 >gi|49473949|ref|YP_031991.1| competence protein comF [Bartonella quintana str. Toulouse] gi|49239452|emb|CAF25803.1| Competence protein comF [Bartonella quintana str. Toulouse] Length = 261 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSM 70 L +YP ICP + ++ +C CW + FIT + D +++ Sbjct: 22 LLTILYPPICPGCKQKVSAYGAICSQCWKDLQFITKPYCPVMGIPFGCDMGDGFLSGEAL 81 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 Q P +++RS ++ ++ LV LKY D +L MA WM Sbjct: 82 QNLPPFSRVRSAIVHKGVAQALVTRLKYGDHIELVSFMANWM 123 >gi|23502731|ref|NP_698858.1| competence protein F [Brucella suis 1330] gi|254704895|ref|ZP_05166723.1| putative competence protein F [Brucella suis bv. 3 str. 686] gi|261755589|ref|ZP_05999298.1| phosphoribosyltransferase [Brucella suis bv. 3 str. 686] gi|23348747|gb|AAN30773.1| competence protein F, putative [Brucella suis 1330] gi|261745342|gb|EEY33268.1| phosphoribosyltransferase [Brucella suis bv. 3 str. 686] Length = 262 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 16/127 (12%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52 A + ++ + ++P+ C I RI ++ LC CWS + FI T Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 53 HILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 H ++ + + ++ P ++RS L+ + + LK+HDRTDLA MA+WM Sbjct: 77 HDFGDHFLSAE-----AIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWM 131 Query: 113 FRVLEKI 119 R ++ Sbjct: 132 QRAGREL 138 >gi|161619796|ref|YP_001593683.1| protein gntX [Brucella canis ATCC 23365] gi|260567631|ref|ZP_05838101.1| competence protein F [Brucella suis bv. 4 str. 40] gi|161336607|gb|ABX62912.1| Protein gntX [Brucella canis ATCC 23365] gi|260157149|gb|EEW92229.1| competence protein F [Brucella suis bv. 4 str. 40] Length = 262 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 16/127 (12%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52 A + ++ + ++P+ C I RI ++ LC CWS + FI T Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 53 HILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 H ++ + + ++ P ++RS L+ + + LK+HDRTDLA MA+WM Sbjct: 77 HDFGDHFLSAE-----AIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWM 131 Query: 113 FRVLEKI 119 R ++ Sbjct: 132 QRAGREL 138 >gi|209551108|ref|YP_002283025.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536864|gb|ACI56799.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 258 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 4/101 (3%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPL--KSMQKDL 74 +YP C + +C CWS I FI E + ++ L +++ Sbjct: 28 LYPPACSVCGISTGGHRGVCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAIANPP 87 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P ++RS + LV LKY DRTDLA MMA WM R Sbjct: 88 PFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAAWMLRA 128 >gi|254700524|ref|ZP_05162352.1| putative competence protein F [Brucella suis bv. 5 str. 513] gi|261751028|ref|ZP_05994737.1| phosphoribosyltransferase [Brucella suis bv. 5 str. 513] gi|261740781|gb|EEY28707.1| phosphoribosyltransferase [Brucella suis bv. 5 str. 513] Length = 262 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52 A + ++ + ++P+ C I RI ++ LC CWS + FI T Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 H + + + I P P ++RS L+ + + LK+HDRTDLA MA Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128 Query: 110 QWMFRVLEKI 119 +WM R ++ Sbjct: 129 RWMQRAGREL 138 >gi|306842968|ref|ZP_07475602.1| competence protein F [Brucella sp. BO2] gi|306286896|gb|EFM58421.1| competence protein F [Brucella sp. BO2] Length = 262 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52 A + ++ + ++P+ C I RI ++ LC CWS + FI T Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 H + + + I P P ++RS L+ + + LK+HDRTDLA MA Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128 Query: 110 QWMFRVLEKI 119 +WM R ++ Sbjct: 129 RWMQRAGREL 138 >gi|163843904|ref|YP_001628308.1| protein gntX [Brucella suis ATCC 23445] gi|254707589|ref|ZP_05169417.1| putative competence protein F [Brucella pinnipedialis M163/99/10] gi|254708873|ref|ZP_05170684.1| putative competence protein F [Brucella pinnipedialis B2/94] gi|254713704|ref|ZP_05175515.1| putative competence protein F [Brucella ceti M644/93/1] gi|254715946|ref|ZP_05177757.1| putative competence protein F [Brucella ceti M13/05/1] gi|256030399|ref|ZP_05444013.1| putative competence protein F [Brucella pinnipedialis M292/94/1] gi|256059857|ref|ZP_05450044.1| putative competence protein F [Brucella neotomae 5K33] gi|256370278|ref|YP_003107789.1| competence protein F, putative [Brucella microti CCM 4915] gi|261217709|ref|ZP_05931990.1| phosphoribosyltransferase [Brucella ceti M13/05/1] gi|261315076|ref|ZP_05954273.1| phosphoribosyltransferase [Brucella pinnipedialis M163/99/10] gi|261316366|ref|ZP_05955563.1| phosphoribosyltransferase [Brucella pinnipedialis B2/94] gi|261321444|ref|ZP_05960641.1| phosphoribosyltransferase [Brucella ceti M644/93/1] gi|261323827|ref|ZP_05963024.1| phosphoribosyltransferase [Brucella neotomae 5K33] gi|265987438|ref|ZP_06099995.1| phosphoribosyltransferase [Brucella pinnipedialis M292/94/1] gi|163674627|gb|ABY38738.1| Protein gntX [Brucella suis ATCC 23445] gi|256000441|gb|ACU48840.1| competence protein F, putative [Brucella microti CCM 4915] gi|260922798|gb|EEX89366.1| phosphoribosyltransferase [Brucella ceti M13/05/1] gi|261294134|gb|EEX97630.1| phosphoribosyltransferase [Brucella ceti M644/93/1] gi|261295589|gb|EEX99085.1| phosphoribosyltransferase [Brucella pinnipedialis B2/94] gi|261299807|gb|EEY03304.1| phosphoribosyltransferase [Brucella neotomae 5K33] gi|261304102|gb|EEY07599.1| phosphoribosyltransferase [Brucella pinnipedialis M163/99/10] gi|264659635|gb|EEZ29896.1| phosphoribosyltransferase [Brucella pinnipedialis M292/94/1] Length = 262 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52 A + ++ + ++P+ C I RI ++ LC CWS + FI T Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 H + + + I P P ++RS L+ + + LK+HDRTDLA MA Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128 Query: 110 QWMFRVLEKI 119 +WM R ++ Sbjct: 129 RWMQRAGREL 138 >gi|256158382|ref|ZP_05456280.1| putative competence protein F [Brucella ceti M490/95/1] gi|256253801|ref|ZP_05459337.1| putative competence protein F [Brucella ceti B1/94] gi|260169308|ref|ZP_05756119.1| putative competence protein F [Brucella sp. F5/99] gi|261220934|ref|ZP_05935215.1| phosphoribosyltransferase [Brucella ceti B1/94] gi|261758821|ref|ZP_06002530.1| competence protein F [Brucella sp. F5/99] gi|265996894|ref|ZP_06109451.1| phosphoribosyltransferase [Brucella ceti M490/95/1] gi|260919518|gb|EEX86171.1| phosphoribosyltransferase [Brucella ceti B1/94] gi|261738805|gb|EEY26801.1| competence protein F [Brucella sp. F5/99] gi|262551362|gb|EEZ07352.1| phosphoribosyltransferase [Brucella ceti M490/95/1] Length = 262 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52 A + ++ + ++P+ C I RI ++ LC CWS + FI T Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 H + + + I P P ++RS L+ + + LK+HDRTDLA MA Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128 Query: 110 QWMFRVLEKI 119 +WM R ++ Sbjct: 129 RWMQRAGREL 138 >gi|148560259|ref|YP_001259705.1| putative competence protein F [Brucella ovis ATCC 25840] gi|148371516|gb|ABQ61495.1| putative competence protein F [Brucella ovis ATCC 25840] Length = 262 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60 A + ++ + ++P+ C I RI ++ LC CWS + FI +L Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 61 NIDKDPLKSMQK---DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + D S + P ++RS L+ + + LK+HDRTDLA MA+WM R Sbjct: 77 HDFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 136 Query: 118 KI 119 ++ Sbjct: 137 EL 138 >gi|306844850|ref|ZP_07477433.1| competence protein F [Brucella sp. BO1] gi|306274782|gb|EFM56563.1| competence protein F [Brucella sp. BO1] Length = 262 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52 A + ++ + ++P+ C I RI ++ LC CWS + FI T Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 H + + + I P P ++RS L+ + + LK+HDRTDLA MA Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128 Query: 110 QWMFRVLEKI 119 +WM R ++ Sbjct: 129 RWMQRAGREL 138 >gi|85713804|ref|ZP_01044794.1| phosphoribosyltransferase [Nitrobacter sp. Nb-311A] gi|85699708|gb|EAQ37575.1| phosphoribosyltransferase [Nitrobacter sp. Nb-311A] Length = 269 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 10/90 (11%) Query: 37 LCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89 +C CW+++ FI T + + + ++++ + R+ Y D++ Sbjct: 54 VCADCWTQLSFIERPYCPRLGTPFVYDPGSEMLS---MEAIANPPAYQRARAAVRYDDVA 110 Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 VLV LKY DRTDLA M +WM R ++ Sbjct: 111 KVLVHALKYQDRTDLAPAMGRWMARAGSEL 140 >gi|163737955|ref|ZP_02145371.1| competence protein F, putative [Phaeobacter gallaeciensis BS107] gi|161388571|gb|EDQ12924.1| competence protein F, putative [Phaeobacter gallaeciensis BS107] Length = 242 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 12/124 (9%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHIL 55 + A IQT S+I YP C ++ F LCG CW FI+ T L Sbjct: 2 LKARIQTAVSLI-------YPPRCLACGDWVDSDFGLCGPCWRDTPFISGTCCDGCGVAL 54 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 D + M P Q R+ Y + L+ LK+ DRT++A A+W+ R Sbjct: 55 MGEGDGFRLECDDCMAHPRPWQQGRAALSYEGTARRLILALKHGDRTEIARPAARWLTRA 114 Query: 116 LEKI 119 + Sbjct: 115 AATL 118 >gi|225628082|ref|ZP_03786117.1| protein gntX [Brucella ceti str. Cudo] gi|225616907|gb|EEH13954.1| protein gntX [Brucella ceti str. Cudo] Length = 290 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60 A + ++ + ++P+ C I RI ++ LC CWS + FI +L Sbjct: 46 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 104 Query: 61 NIDKD---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R Sbjct: 105 HDFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 164 Query: 118 KI 119 ++ Sbjct: 165 EL 166 >gi|241206509|ref|YP_002977605.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860399|gb|ACS58066.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 258 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATE------HILKNNKDNIDKDPLKSMQK 72 YP C + LC CWS I FI L + I +++ Sbjct: 28 FYPPACSVCGISTGGHRGLCAKCWSGIRFIERPYCEVLGIPFLHDLGAGILS--AEAIAN 85 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P ++RS + LV LKY DRTDLA MMA WM R Sbjct: 86 PPPFDRLRSAATHDRAVRDLVHGLKYRDRTDLAPMMAAWMLRA 128 >gi|299132843|ref|ZP_07026038.1| phosphoribosyltransferase [Afipia sp. 1NLS2] gi|298592980|gb|EFI53180.1| phosphoribosyltransferase [Afipia sp. 1NLS2] Length = 266 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSMQKDLPLTQIRSVTLYCDMSCVL 92 LC CW+K+ FI D P ++++ + R+ Y D++ L Sbjct: 51 LCPACWAKLSFIAPPYCARLGIPFVYDPGPGLLSMEAIAAPPAYHRARAAVRYDDVAGTL 110 Query: 93 VRLLKYHDRTDLAIMMAQWMFRVLEKI 119 V LKY DRTDLA M +WM R ++ Sbjct: 111 VHALKYQDRTDLAPAMGRWMARAGAEL 137 >gi|254717947|ref|ZP_05179758.1| protein gntX [Brucella sp. 83/13] gi|265982890|ref|ZP_06095625.1| phosphoribosyltransferase [Brucella sp. 83/13] gi|306838253|ref|ZP_07471103.1| competence protein F [Brucella sp. NF 2653] gi|264661482|gb|EEZ31743.1| phosphoribosyltransferase [Brucella sp. 83/13] gi|306406656|gb|EFM62885.1| competence protein F [Brucella sp. NF 2653] Length = 262 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60 A + ++ + ++P+ C I RI ++ LC CWS + FI + +L Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERSYCPVLGTPFG 76 Query: 61 NIDKD---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + D +++ P ++RS L+ + + LK+HDRTDLA MA+WM Sbjct: 77 HDFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWM 131 >gi|84684631|ref|ZP_01012532.1| competence protein F, putative [Maritimibacter alkaliphilus HTCC2654] gi|84667610|gb|EAQ14079.1| competence protein F, putative [Rhodobacterales bacterium HTCC2654] Length = 238 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 13/114 (11%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 L IYP+ C I+ LCG CW + F+T H+ +K + DL Sbjct: 4 LLRAIYPAQCASCGEIVEGDGGLCGPCWRETRFVTG--HVC--DKCGVGLPGESDGHLDL 59 Query: 75 ---------PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P +Q R+ Y LV K+ DR D+A A+W+ R + + Sbjct: 60 CDDCMTIARPWSQGRTALDYTGNGRRLVLAFKHADRPDIAEPAARWVARAAQPL 113 >gi|150397708|ref|YP_001328175.1| phosphoribosyltransferase [Sinorhizobium medicae WSM419] gi|150029223|gb|ABR61340.1| phosphoribosyltransferase [Sinorhizobium medicae WSM419] Length = 258 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 10/103 (9%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQ 71 ++P +C R+ +C CW+KI I + + + ++ Sbjct: 28 VFPPVCCGCGRLTGDARAVCPSCWAKIPLIERPYCEVLGMPFTFDPGEGAVSPE---AIA 84 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 ++RS ++ + LV LKY DRTDLA MMA+WM R Sbjct: 85 NPPVFDRLRSAAIHEGIVRDLVHGLKYRDRTDLAPMMAEWMIR 127 >gi|116254026|ref|YP_769864.1| hypothetical protein RL4290 [Rhizobium leguminosarum bv. viciae 3841] gi|115258674|emb|CAK09778.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 246 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 7/110 (6%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPL 67 S + + F YP C + + LC CWS I FI E + ++ L Sbjct: 10 SALADFF---YPPACSVCGISTGVHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGIL 66 Query: 68 KSMQKDLP--LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + P ++RS + LV LKY DRTDLA MMA WM R Sbjct: 67 SAEAIANPPAFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAAWMLRA 116 >gi|326539594|gb|ADZ87809.1| competence protein F [Brucella melitensis M5-90] Length = 251 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60 A + ++ + ++P+ C I RI ++ LC CWS + FI +L Sbjct: 7 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 65 Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R Sbjct: 66 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 125 Query: 118 KI 119 ++ Sbjct: 126 EL 127 >gi|256112214|ref|ZP_05453135.1| competence protein F [Brucella melitensis bv. 3 str. Ether] gi|265993642|ref|ZP_06106199.1| phosphoribosyltransferase [Brucella melitensis bv. 3 str. Ether] gi|262764623|gb|EEZ10544.1| phosphoribosyltransferase [Brucella melitensis bv. 3 str. Ether] Length = 262 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60 A + ++ + ++P+ C I RI ++ LC CWS + FI +L Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R Sbjct: 77 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 136 Query: 118 KI 119 ++ Sbjct: 137 EL 138 >gi|62290737|ref|YP_222530.1| competence protein F [Brucella abortus bv. 1 str. 9-941] gi|82700649|ref|YP_415223.1| competence protein F [Brucella melitensis biovar Abortus 2308] gi|189024949|ref|YP_001935717.1| competence protein F [Brucella abortus S19] gi|254690026|ref|ZP_05153280.1| putative competence protein F [Brucella abortus bv. 6 str. 870] gi|254694515|ref|ZP_05156343.1| putative competence protein F [Brucella abortus bv. 3 str. Tulya] gi|254696140|ref|ZP_05157968.1| putative competence protein F [Brucella abortus bv. 2 str. 86/8/59] gi|254731058|ref|ZP_05189636.1| putative competence protein F [Brucella abortus bv. 4 str. 292] gi|256258280|ref|ZP_05463816.1| putative competence protein F [Brucella abortus bv. 9 str. C68] gi|260546000|ref|ZP_05821740.1| competence protein F [Brucella abortus NCTC 8038] gi|260755561|ref|ZP_05867909.1| phosphoribosyltransferase [Brucella abortus bv. 6 str. 870] gi|260758784|ref|ZP_05871132.1| phosphoribosyltransferase [Brucella abortus bv. 4 str. 292] gi|260760508|ref|ZP_05872851.1| phosphoribosyltransferase [Brucella abortus bv. 2 str. 86/8/59] gi|260884585|ref|ZP_05896199.1| phosphoribosyltransferase [Brucella abortus bv. 9 str. C68] gi|261214832|ref|ZP_05929113.1| phosphoribosyltransferase [Brucella abortus bv. 3 str. Tulya] gi|297247124|ref|ZP_06930842.1| competence protein ComFC [Brucella abortus bv. 5 str. B3196] gi|62196869|gb|AAX75169.1| competence protein F, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82616750|emb|CAJ11836.1| competence protein F [Brucella melitensis biovar Abortus 2308] gi|189020521|gb|ACD73243.1| competence protein F [Brucella abortus S19] gi|260096107|gb|EEW79983.1| competence protein F [Brucella abortus NCTC 8038] gi|260669102|gb|EEX56042.1| phosphoribosyltransferase [Brucella abortus bv. 4 str. 292] gi|260670940|gb|EEX57761.1| phosphoribosyltransferase [Brucella abortus bv. 2 str. 86/8/59] gi|260675669|gb|EEX62490.1| phosphoribosyltransferase [Brucella abortus bv. 6 str. 870] gi|260874113|gb|EEX81182.1| phosphoribosyltransferase [Brucella abortus bv. 9 str. C68] gi|260916439|gb|EEX83300.1| phosphoribosyltransferase [Brucella abortus bv. 3 str. Tulya] gi|297174293|gb|EFH33640.1| competence protein ComFC [Brucella abortus bv. 5 str. B3196] Length = 262 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60 A + ++ + ++P+ C I RI ++ LC CWS + FI +L Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R Sbjct: 77 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 136 Query: 118 KI 119 ++ Sbjct: 137 EL 138 >gi|209883247|ref|YP_002287104.1| phosphoribosyltransferase [Oligotropha carboxidovorans OM5] gi|209871443|gb|ACI91239.1| phosphoribosyltransferase [Oligotropha carboxidovorans OM5] Length = 278 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSMQKDLPLTQIRSVTLYCDMSCVL 92 LC CWSK+ FI D P ++++ + R+ Y +++ L Sbjct: 63 LCPACWSKLSFIAPPYCARLGIPFVYDPGPGVLSMEAIAAPPAYHRARAAVRYDEVAKTL 122 Query: 93 VRLLKYHDRTDLAIMMAQWMFRV 115 V LKY DRTDLA M +WM R Sbjct: 123 VHALKYEDRTDLAPTMGRWMTRA 145 >gi|17986467|ref|NP_539101.1| competence protein F [Brucella melitensis bv. 1 str. 16M] gi|225853317|ref|YP_002733550.1| competence protein F [Brucella melitensis ATCC 23457] gi|256045489|ref|ZP_05448372.1| putative competence protein F [Brucella melitensis bv. 1 str. Rev.1] gi|256263196|ref|ZP_05465728.1| competence protein F [Brucella melitensis bv. 2 str. 63/9] gi|260562798|ref|ZP_05833284.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265991911|ref|ZP_06104468.1| phosphoribosyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|17982065|gb|AAL51365.1| competence protein f [Brucella melitensis bv. 1 str. 16M] gi|225641682|gb|ACO01596.1| competence protein F [Brucella melitensis ATCC 23457] gi|260152814|gb|EEW87906.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|263002977|gb|EEZ15270.1| phosphoribosyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|263093118|gb|EEZ17253.1| competence protein F [Brucella melitensis bv. 2 str. 63/9] gi|326409880|gb|ADZ66945.1| competence protein F [Brucella melitensis M28] Length = 262 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60 A + ++ + ++P+ C I RI ++ LC CWS + FI +L Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76 Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R Sbjct: 77 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 136 Query: 118 KI 119 ++ Sbjct: 137 EL 138 >gi|237816244|ref|ZP_04595237.1| competence protein F [Brucella abortus str. 2308 A] gi|237788311|gb|EEP62526.1| competence protein F [Brucella abortus str. 2308 A] Length = 290 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60 A + ++ + ++P+ C I RI ++ LC CWS + FI +L Sbjct: 46 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 104 Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R Sbjct: 105 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 164 Query: 118 KI 119 ++ Sbjct: 165 EL 166 >gi|110635335|ref|YP_675543.1| phosphoribosyltransferase [Mesorhizobium sp. BNC1] gi|110286319|gb|ABG64378.1| phosphoribosyltransferase [Chelativorans sp. BNC1] Length = 270 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 20/109 (18%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFI---------TATEHILKNN---KDNIDKDP 66 + P +C ++ LC CW ++ F+ T H + + I P Sbjct: 32 LSPPVCIGCRNLVTAPGTLCPECWPELRFLEQPWCPVMGTPFPHDMGEGFLSGEAIANPP 91 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P + RS Y ++ +V LK+ DRTDLA MA+WM R Sbjct: 92 --------PFARARSAVAYRGVAGRMVLSLKFSDRTDLAPWMARWMLRA 132 >gi|260576133|ref|ZP_05844126.1| competence protein F, putative [Rhodobacter sp. SW2] gi|259021613|gb|EEW24916.1| competence protein F, putative [Rhodobacter sp. SW2] Length = 240 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD-- 73 H +YP C ++ F LC CW + FIT K +DP ++ D Sbjct: 7 LHLVYPPQCLSCDALVTTDFGLCSKCWRETPFITGLV-CDKCGTPLPGEDPGNAVHCDDC 65 Query: 74 ----LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 P Q R+ LY LV LK+ DR DLA A WM Sbjct: 66 LTIARPWVQGRAALLYKGNGRRLVLALKHGDRLDLAKPAAGWM 108 >gi|126724616|ref|ZP_01740459.1| Competence protein F [Rhodobacterales bacterium HTCC2150] gi|126705780|gb|EBA04870.1| Competence protein F [Rhodobacterales bacterium HTCC2150] Length = 240 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 7/108 (6%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQ 71 IYP+ C I++ F CG CW + FIT T ++ N + + M+ Sbjct: 8 IYPAQCLTCGDIVDSEFGFCGACWRETPFITGLICDLCGTSLPGDASEQNQELHCDECMR 67 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + RS +Y D + V LK+ DR D A A W+ ++ + Sbjct: 68 IARPWEKGRSAMIYKDNARRFVLGLKHGDRLDFARPAANWIAAKMQGL 115 >gi|163745080|ref|ZP_02152440.1| competence protein F, putative [Oceanibulbus indolifex HEL-45] gi|161381898|gb|EDQ06307.1| competence protein F, putative [Oceanibulbus indolifex HEL-45] Length = 220 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 5/95 (5%) Query: 30 IINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTL 84 +++ F LCG CW FI T L D + P TQ R+ + Sbjct: 1 MVDADFGLCGTCWRDTGFIGGTVCDACGVPLPGGGDLASPHCDACLVTPRPWTQGRAALI 60 Query: 85 YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Y DM LV LK+ DR ++A A+W+ + I Sbjct: 61 YRDMGRKLVLALKHGDRQEIARPAARWLVHAAQDI 95 >gi|27375320|ref|NP_766849.1| competence protein F [Bradyrhizobium japonicum USDA 110] gi|27348456|dbj|BAC45474.1| competence protein F [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%) Query: 37 LCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89 +C CW+++ FI + D + + + S + R+ Y D++ Sbjct: 54 VCAACWARLSFIERPYCPRLGIPFVYDPGPDMLSMEAIASPPA---YQRARAAVRYDDVA 110 Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 LV LKY DRTDLA M +WM R ++ Sbjct: 111 RTLVHALKYQDRTDLAPAMGRWMARAGGEL 140 >gi|259418155|ref|ZP_05742074.1| competence protein F [Silicibacter sp. TrichCH4B] gi|259347061|gb|EEW58875.1| competence protein F [Silicibacter sp. TrichCH4B] Length = 243 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 9/120 (7%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA-------TEHILKNNK 59 T+++ I +YP+ C ++ F LC CW FI+ + + Sbjct: 2 TLRARIQTAVSLVYPARCLNCGGLVESDFGLCSACWRDTTFISGLVCDCCGVPLPGEADG 61 Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ D S +D Q R+ LY LV LK+ DRTDLA + WM R + Sbjct: 62 QSVHCDECLSSPRDW--EQGRAAILYGGQGRRLVLALKHGDRTDLARPASGWMARAARDL 119 >gi|254486071|ref|ZP_05099276.1| competence protein F [Roseobacter sp. GAI101] gi|214042940|gb|EEB83578.1| competence protein F [Roseobacter sp. GAI101] Length = 242 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 5/105 (4%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73 IYP +C ++ + LCG CW + FI T L N M Sbjct: 12 IYPPVCLGCNQPVEKTAGLCGPCWRETAFIGGTVCDRCGVPLPGNDVGEMAHCDACMTDP 71 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 P Q RS LY + +V LK+ DR ++A A WM R + K Sbjct: 72 PPWVQGRSALLYRGIGRKIVLGLKHGDRQEIARPAALWMARAVAK 116 >gi|149204345|ref|ZP_01881312.1| competence protein F, putative [Roseovarius sp. TM1035] gi|149142230|gb|EDM30277.1| competence protein F, putative [Roseovarius sp. TM1035] Length = 232 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITA----TEHILKNNKDNIDK---DPLKSMQ 71 +YP+ C + +++ F LCG CW FI+ T + + + + D M Sbjct: 2 VYPARCTLCGAVVDSDFGLCGPCWRDTPFISGLVCETCGVPLPGEGHAEAAHCDDCLRMA 61 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P +Q R+ Y + L+ +LK+ DR D+ A+WM R + + Sbjct: 62 R--PWSQGRAAIRYHENGRKLILMLKHGDRHDVVRPAAKWMARAAQPL 107 >gi|332559669|ref|ZP_08413991.1| competence protein F [Rhodobacter sphaeroides WS8N] gi|332277381|gb|EGJ22696.1| competence protein F [Rhodobacter sphaeroides WS8N] Length = 240 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 7/107 (6%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73 ++P C + + F LCG CW FI L +DP ++ D Sbjct: 10 LFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDL-CGAPLPGEDPGHPVRCDDCLSS 68 Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P R+ LY D L LK+ DR DLA +A W+FR I Sbjct: 69 ARPWAHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWIFRAARPI 115 >gi|56694999|ref|YP_165345.1| competence protein F, putative [Ruegeria pomeroyi DSS-3] gi|56676736|gb|AAV93402.1| competence protein F, putative [Ruegeria pomeroyi DSS-3] Length = 242 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 5/106 (4%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73 +YP C ++ F LCG CW FI T L +D + M Sbjct: 12 VYPPRCLGCGDLVTSDFGLCGKCWRDTPFIDGTVCDSCGAPLPGARDGHRIECDDCMAHP 71 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + R+ LY + +V LK+ DR +LA WM R + Sbjct: 72 RPWSDGRAALLYTGRARRMVLALKHGDRPELARPGGLWMARAAAPL 117 >gi|163759885|ref|ZP_02166969.1| phosphoribosyltransferase [Hoeflea phototrophica DFL-43] gi|162282843|gb|EDQ33130.1| phosphoribosyltransferase [Hoeflea phototrophica DFL-43] Length = 187 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 27/45 (60%) Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + R+ LY ++ L + LKY DR DLA MMA+WM R +I Sbjct: 12 PYAKARAAVLYDGVARKLAQGLKYSDRADLAKMMAKWMVRAGREI 56 >gi|153008363|ref|YP_001369578.1| competence protein F [Ochrobactrum anthropi ATCC 49188] gi|151560251|gb|ABS13749.1| competence protein F, putative [Ochrobactrum anthropi ATCC 49188] Length = 262 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 14/110 (12%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT---------EHILKNNKDNIDKDPLKS 69 ++P C ++ LC CW ++ FI H +N + + + Sbjct: 34 LFPPTCIGCRAHVSEPGTLCPKCWPELRFIERPYCPVLGIPFSHDFGDNFTSAE-----A 88 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P ++RS L+ + + LK+HDRTDLA MA+WM R ++ Sbjct: 89 IADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGREL 138 >gi|115522182|ref|YP_779093.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisA53] gi|115516129|gb|ABJ04113.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisA53] Length = 273 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP-LKSMQK--DLPLTQ-IRSVTLYCDMSCVL 92 LC CWS++ FI D P + SMQ D P Q R+ Y +++ L Sbjct: 58 LCASCWSQLSFIEPPFCERLGIPFVYDPGPGILSMQAIADPPAYQRARAAVRYDEVARTL 117 Query: 93 VRLLKYHDRTDLAIMMAQWM 112 V LK+HDR DLA +M +WM Sbjct: 118 VHALKFHDRVDLAPVMGRWM 137 >gi|310817136|ref|YP_003965100.1| Competence protein F [Ketogulonicigenium vulgare Y25] gi|308755871|gb|ADO43800.1| Competence protein F [Ketogulonicigenium vulgare Y25] Length = 244 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 V ++ + H IYP C + + LCG CW+ FI L D + Sbjct: 7 VGRLMDRIAHVIYPPGCMGCAAPVVGENALCGPCWAAAGFIAGASCTLCAVPLPGAGDAV 66 Query: 68 --KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + P + R++ +Y ++ L+ LK+ DRTDLA ++ W+ R Sbjct: 67 CDACLYHAPPWDRGRALMVYEGLARQLILQLKHADRTDLAPALSSWLMR 115 >gi|148258762|ref|YP_001243347.1| putative competence protein F (COMF) [Bradyrhizobium sp. BTAi1] gi|146410935|gb|ABQ39441.1| putative competence protein F (COMF) [Bradyrhizobium sp. BTAi1] Length = 267 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSMQKDLPLTQIRSVTLYCDMSCVL 92 +C CW K+ FI D P ++++ + R+ Y +++ L Sbjct: 52 VCAACWGKLSFIERPYCPKLGIPFVYDPGPELLSMEAIAAPPAYAKARAAVRYDEVARTL 111 Query: 93 VRLLKYHDRTDLAIMMAQWMFRVLEKI 119 V LKY DRTDLA +M +WM R ++ Sbjct: 112 VHQLKYQDRTDLAPIMGRWMARAGREL 138 >gi|220921700|ref|YP_002497001.1| phosphoribosyltransferase [Methylobacterium nodulans ORS 2060] gi|219946306|gb|ACL56698.1| phosphoribosyltransferase [Methylobacterium nodulans ORS 2060] Length = 264 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 5/120 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNN 58 MP+ + V S + L IYP C LC CW + FI E + Sbjct: 1 MPSFHRPVLSALEALVGLIYPPSCIACGAATGTPHALCPACWRGMRFIEPPYCERLGTPF 60 Query: 59 KDNIDKDPL--KSMQKDLPL-TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 ++ L + D P+ + R+ Y D + LV LKY DR DLA + M R Sbjct: 61 AVDLGVPGLLSPAAMADPPVFARARAAVRYDDAARRLVHRLKYEDRLDLAAALGGMMARA 120 >gi|159046040|ref|YP_001534834.1| competence protein F [Dinoroseobacter shibae DFL 12] gi|157913800|gb|ABV95233.1| competence protein F [Dinoroseobacter shibae DFL 12] Length = 258 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 11/112 (9%) Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--------EHILKNNKDNIDKDPL 67 +YP C + F LCG C + FI L + +I +D L Sbjct: 10 LRTVYPPSCITCRAPVASDFGLCGECLRQTPFIAGGICNTCGVPVAGLSETETDICEDCL 69 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P ++ R+V Y DM LV LK+ DRTDLA W+ R + Sbjct: 70 NIPR---PWSRGRAVMTYQDMGRTLVLQLKHSDRTDLARPAGAWLARAARPL 118 >gi|239832955|ref|ZP_04681284.1| competence protein F [Ochrobactrum intermedium LMG 3301] gi|239825222|gb|EEQ96790.1| competence protein F [Ochrobactrum intermedium LMG 3301] Length = 288 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 16/127 (12%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITAT---------E 52 + Q V + ++P C I R+ ++ LC CW ++ FI Sbjct: 44 GLRQLVGRAVRSSADTLFPPTC-IGCRMHVSEPGTLCPKCWPELRFIERPYCPVLGIPFS 102 Query: 53 HILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 H N + + ++ P ++RS L+ + + LK+HDRTDLA MA+WM Sbjct: 103 HDFGENFMSAE-----AIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWM 157 Query: 113 FRVLEKI 119 R ++ Sbjct: 158 QRAGREL 164 >gi|222149922|ref|YP_002550879.1| competence protein F [Agrobacterium vitis S4] gi|221736904|gb|ACM37867.1| competence protein F [Agrobacterium vitis S4] Length = 236 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 10/104 (9%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATE-HILKNNKDNIDKDPLKSMQ-----K 72 +YP C + LC CW + FI IL DP + M Sbjct: 6 VYPPGCATCGLPVAKAGSLCSDCWCSVRFIERPYCEILGLP---FGFDPGQGMVCAEAIA 62 Query: 73 DLPL-TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + P+ ++R+ ++ + LV LKY DRTDLA MMA WM R Sbjct: 63 NPPVFDRLRAAVVHDGAARDLVHRLKYGDRTDLAPMMAHWMIRA 106 >gi|144900147|emb|CAM77011.1| competence protein F [Magnetospirillum gryphiswaldense MSR-1] Length = 244 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 9/113 (7%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS---- 69 +L + P +C I+ LC CWS + F+ A + D DP + Sbjct: 10 KLLDAVLPPLCLCCGAIVAEPGALCAQCWSGLRFVAAPHCPVCGQP--FDTDPGGADMVC 67 Query: 70 ---MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + P + R+V Y D S L+ K+ DR + A +W+ R ++ Sbjct: 68 GRCLAEPPPWDRARAVFCYDDASKPLILRFKHADRLEGAPAFGRWLARAGAEL 120 >gi|84514889|ref|ZP_01002252.1| competence protein F, putative [Loktanella vestfoldensis SKA53] gi|84511048|gb|EAQ07502.1| competence protein F, putative [Loktanella vestfoldensis SKA53] Length = 241 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 5/111 (4%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLK 68 + IYP+ C LCG CW + FI T L + D Sbjct: 6 SVIRAIYPAQCVACETQTQAENGLCGTCWRETQFIDGTICDTCGAPLPGDSDGHRLQCDD 65 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 M P + R+ +Y + LV LK+ DRTDL WM R+ + Sbjct: 66 CMAIARPWDRGRAALVYNGIGRKLVLGLKHGDRTDLVEPAGLWMARLARAL 116 >gi|83942062|ref|ZP_00954524.1| Competence protein F [Sulfitobacter sp. EE-36] gi|83847882|gb|EAP85757.1| Competence protein F [Sulfitobacter sp. EE-36] Length = 242 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 37/103 (35%), Gaps = 5/103 (4%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73 IYP C + LCG CW FI L + D + Sbjct: 12 IYPPSCLACGAWVTAHGGLCGPCWRDTGFIEGVVCETCGIPLLGDLSETDVRCDACLAAP 71 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 P R+ LY D LV LK+ DR D+A WM RV+ Sbjct: 72 PPWEHGRAALLYRDTGRRLVLALKHGDRQDIAKPAGHWMARVI 114 >gi|221640691|ref|YP_002526953.1| Competence protein F [Rhodobacter sphaeroides KD131] gi|221161472|gb|ACM02452.1| Competence protein F [Rhodobacter sphaeroides KD131] Length = 240 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 7/107 (6%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73 ++P C + + F LCG CW FI L +DP ++ D Sbjct: 10 LFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDL-CGAPLPGEDPGHPVRCDDCLSS 68 Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + R+ LY D L LK+ DR DLA +A W+ R I Sbjct: 69 ARPWDRGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115 >gi|154247019|ref|YP_001417977.1| phosphoribosyltransferase [Xanthobacter autotrophicus Py2] gi|154161104|gb|ABS68320.1| phosphoribosyltransferase [Xanthobacter autotrophicus Py2] Length = 255 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 8/112 (7%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 +++ L P C I + LCG CW K+ FI + + DP Sbjct: 14 ALRAFGSGLLGLALPPTCIACGGITGMAGGLCGPCWGKLAFI--SRPFCERTGAPFTHDP 71 Query: 67 ----LKSMQKDLP--LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + + D P + R+ + D++ LV LKY DR D+A +A+ M Sbjct: 72 GGARISAQALDDPPAFDRARAAVTFNDVARDLVHKLKYADRLDVAAPLARLM 123 >gi|126463616|ref|YP_001044730.1| competence protein F [Rhodobacter sphaeroides ATCC 17029] gi|126105280|gb|ABN77958.1| competence protein F [Rhodobacter sphaeroides ATCC 17029] Length = 240 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 7/107 (6%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73 ++P C + + F LCG CW FI A + +DP ++ D Sbjct: 10 LFPPQCLLCETQVTTEFGLCGACWRDTPFI-AGLVCDRCGAPLPGEDPGHPVRCDDCLSS 68 Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P R+ LY D L LK+ DR DLA +A W+ R I Sbjct: 69 ARPWDHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115 >gi|77464774|ref|YP_354278.1| competence protein F [Rhodobacter sphaeroides 2.4.1] gi|77389192|gb|ABA80377.1| Competence protein F [Rhodobacter sphaeroides 2.4.1] Length = 240 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73 ++P C + + F LCG CW FI L +DP ++ D Sbjct: 10 LFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDL-CGAPLPGEDPGHPVRCDDCLSS 68 Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P R+ LY D L LK+ DR DLA +A W+ R I Sbjct: 69 ARPWDHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115 >gi|218659666|ref|ZP_03515596.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli IE4771] Length = 182 Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 23/41 (56%) Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P ++RS + LV LKY DRTDLA MMA WM R Sbjct: 12 PFDRVRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 52 >gi|84500737|ref|ZP_00998986.1| competence protein F, putative [Oceanicola batsensis HTCC2597] gi|84391690|gb|EAQ04022.1| competence protein F, putative [Oceanicola batsensis HTCC2597] Length = 244 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 5/110 (4%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNN---KDNIDK 64 + S++ +YP C ++ LCG CW FI A+ L D++ Sbjct: 3 LASVLQTALRLVYPPTCLTCDALVEADHGLCGTCWGATPFIGASVCGLCGAPLPGDHVAA 62 Query: 65 DPL--KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 L + + P R+ +Y D + LV LK+ DR D+A + WM Sbjct: 63 GDLCDDCLTTERPWDAGRAALVYRDNARRLVLGLKHGDRMDIARPASLWM 112 >gi|319406072|emb|CBI79702.1| competence protein ComF [Bartonella sp. AR 15-3] Length = 225 Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 10/84 (11%) Query: 36 CLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDM 88 +C CW + FIT T + + + ++Q P + +RS ++ + Sbjct: 7 TVCSDCWKDLQFITKPYCPVMGTPFAYDIGEKFLSGE---AIQNPPPFSFLRSAVVHKGL 63 Query: 89 SCVLVRLLKYHDRTDLAIMMAQWM 112 + L LKY DR +LA MA WM Sbjct: 64 ARTLATQLKYGDRLELASFMANWM 87 >gi|158425919|ref|YP_001527211.1| competence protein F [Azorhizobium caulinodans ORS 571] gi|158332808|dbj|BAF90293.1| competence protein F [Azorhizobium caulinodans ORS 571] Length = 264 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 10/108 (9%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPL 67 L P C I+ LC CW + I T ++ + + Sbjct: 31 LLDLALPPTCIACKAIVGTPGTLCAACWRDLRLIERPYCERLGTPFPFEDGATRLS---V 87 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 +++ + R+ TL+ +S LV LKY DR DLA+ MA+ M R Sbjct: 88 EAVTDPPAFDRARAATLFGPVSQDLVHGLKYADRMDLALPMARLMARA 135 >gi|190571652|ref|YP_001976010.1| competence protein f [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019054|ref|ZP_03334861.1| competence protein f [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357924|emb|CAQ55385.1| competence protein f [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995163|gb|EEB55804.1| competence protein f [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 234 Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 13/108 (12%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-------ILKNNKDNIDKDPLKSMQ 71 I+P++C RII+ + LC C KI+F+ T+H ++ +N D K + Sbjct: 13 IFPNVCVSCERIIDKSYDLCSECNKKINFL--TKHYCNVCGVVIPDNIDTCG----KCIS 66 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P +RSV Y + S ++ K+ D + + A+WM++ + I Sbjct: 67 NPSPFKVLRSVFAYDEHSKNMIINFKFFDNLNYVKVYAKWMYKANKDI 114 >gi|91974589|ref|YP_567248.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB5] gi|91681045|gb|ABE37347.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB5] Length = 272 Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNI-DKDP-LKSMQK--DLPLTQIRSVTLYCD-MSCV 91 LC CWS++ FI A + K + D P L SMQ D P + D ++ Sbjct: 57 LCAPCWSQLSFI-APPYCEKLGIPFVYDPGPGLLSMQAIADPPAYARARAAVRYDEVAKT 115 Query: 92 LVRLLKYHDRTDLAIMMAQWM 112 LV LK+HDR DLA M +WM Sbjct: 116 LVHALKFHDRVDLAPTMGRWM 136 >gi|146337714|ref|YP_001202762.1| putative competence protein F (COMF) [Bradyrhizobium sp. ORS278] gi|146190520|emb|CAL74519.1| putative competence protein F (COMF) [Bradyrhizobium sp. ORS278] Length = 267 Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 4/87 (4%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP-LKSMQKDLPLTQIRSVTL---YCDMSCVL 92 +C CW K+ FI D P L SM+ Y D++ L Sbjct: 52 VCAACWGKLSFIERPYCPKLGIPFVYDPGPELLSMEAIAAPPAYARARAAVRYDDVASTL 111 Query: 93 VRLLKYHDRTDLAIMMAQWMFRVLEKI 119 V LKY DRTDLA +M +WM R ++ Sbjct: 112 VHALKYQDRTDLAPIMGRWMTRAGHEL 138 >gi|146278666|ref|YP_001168825.1| amidophosphoribosyltransferase-like protein [Rhodobacter sphaeroides ATCC 17025] gi|145556907|gb|ABP71520.1| amidophosphoribosyltransferase-like protein [Rhodobacter sphaeroides ATCC 17025] Length = 240 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 7/107 (6%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73 ++P C + ++ F LCG CW F+ L +DP + D Sbjct: 10 LFPPQCLLCETLVTTDFGLCGPCWRATPFVAGLVCDLCGCP-LPGEDPGHPVHCDECLTS 68 Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P Q R+ LY D + LV LK+ DR DL A W+ V + Sbjct: 69 ARPWDQGRAAMLYRDNARKLVLALKHGDRLDLVRPAAGWILGVARPL 115 >gi|126734442|ref|ZP_01750189.1| Competence protein F [Roseobacter sp. CCS2] gi|126717308|gb|EBA14172.1| Competence protein F [Roseobacter sp. CCS2] Length = 240 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 9/113 (7%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA-------TEHILKNNKDNIDKDP 66 + IYP C LC CW FI T +++ + + D Sbjct: 5 SVIRAIYPPQCVACDAQTEDDNGLCAVCWKDTQFIGGLVCNTCGTPLPGEDHGEVVQCDD 64 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ + P RSV +Y + LV LK+ DRTDLA A+WM + + + Sbjct: 65 CMTIAR--PWDTGRSVLVYNGVGRRLVLGLKHGDRTDLAPTAARWMAQKMANL 115 >gi|298292753|ref|YP_003694692.1| phosphoribosyltransferase [Starkeya novella DSM 506] gi|296929264|gb|ADH90073.1| phosphoribosyltransferase [Starkeya novella DSM 506] Length = 273 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQ-KDL 74 P IC ++ CLC CW + FI L + D +D + S D Sbjct: 38 PPICMTRRAAVDQPGCLCATCWRGMEFIERPYCDRLGTPLPYDADPLDGPAVSSAALADP 97 Query: 75 PLTQIRSVTL-YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + +++ LV LKY DR D+A MA+ M R I Sbjct: 98 PAYARARAVAAFGEVARDLVHALKYADRLDVAPPMARMMARAGADI 143 >gi|118588528|ref|ZP_01545937.1| phosphoribosyltransferase [Stappia aggregata IAM 12614] gi|118439234|gb|EAV45866.1| phosphoribosyltransferase [Stappia aggregata IAM 12614] Length = 253 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 37 LCGHCWSKIHFITAT--EHILKNNKDNIDKDPLKSMQKDLP--LTQIRSVTLYCDMSCVL 92 LC CWS++ F+ E + ++ + P ++R+V Y + + Sbjct: 36 LCAQCWSQVPFLEKPWCERLGIPFAYDVGEGAWSPQAITAPPVFNRLRAVAFYDGPARQM 95 Query: 93 VRLLKYHDRTDLAIMMAQWMFR 114 V LK+ R DLA MA+WM R Sbjct: 96 VHALKFSGRRDLARPMARWMVR 117 >gi|86747153|ref|YP_483649.1| phosphoribosyltransferase [Rhodopseudomonas palustris HaA2] gi|86570181|gb|ABD04738.1| Phosphoribosyltransferase [Rhodopseudomonas palustris HaA2] Length = 254 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNI-DKDP-LKSMQK--DLPLTQIRSVTLYCD-MSCV 91 LC CWS++ FI A + K + D P + SMQ D P + D ++ Sbjct: 39 LCPQCWSQLSFI-APPYCEKLGIPFVYDPGPGILSMQAIADPPAYARARAAVRYDEVAKT 97 Query: 92 LVRLLKYHDRTDLAIMMAQWM 112 LV LK+HDR DLA M +WM Sbjct: 98 LVHALKFHDRIDLAPTMGRWM 118 >gi|296444589|ref|ZP_06886553.1| phosphoribosyltransferase [Methylosinus trichosporium OB3b] gi|296257857|gb|EFH04920.1| phosphoribosyltransferase [Methylosinus trichosporium OB3b] Length = 262 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 5/117 (4%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHI-LKNNKDNIDK 64 ++ L +YP +C + + LC CW + FI E + L ++D Sbjct: 21 LRGFGARLLDLVYPPVCLVCREAVATHGALCPACWGGMGFIERPYCERLGLPFDRDLGAG 80 Query: 65 DPLKSMQKDLPLTQIRSVTLY--CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + D P D + L LKY+DR +LA + +WM R ++ Sbjct: 81 AISLAASADPPAFARARAVARYDSDKARSLAHRLKYYDRLELAEPLGRWMARAGAEL 137 >gi|197104234|ref|YP_002129611.1| predicted amidophosphoribosyltransferase [Phenylobacterium zucineum HLK1] gi|196477654|gb|ACG77182.1| predicted amidophosphoribosyltransferase [Phenylobacterium zucineum HLK1] Length = 259 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 40 HCWSKIHFITATEHILKNNKDNIDKDPLKS----MQKDLPLTQIRSVTLYCDMSCVLVRL 95 WS+IHF+ + D DP + + R+ LY + S + Sbjct: 49 GAWSRIHFLDGP--VCDGCGVPFDYDPGARCPACQARPRAFDRARAACLYDETSREPILK 106 Query: 96 LKYHDRTDLAIMMAQWMFRVLEKI 119 LK+ DRTDLA + A+W+ R ++ Sbjct: 107 LKHADRTDLAPLFARWLSRAAREL 130 >gi|306820763|ref|ZP_07454389.1| phosphoribosyl transferase, competence protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551212|gb|EFM39177.1| phosphoribosyl transferase, competence protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 222 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 8/85 (9%) Query: 34 RFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLV 93 +F LC +C+ I F+ I DK+ ++ ++ D ++++ T+Y D+ ++ Sbjct: 23 KFSLCKNCYENIEFLYDKNTIF-------DKEVMELLKNDY-ISKVHITTIYNDIMKNMI 74 Query: 94 RLLKYHDRTDLAIMMAQWMFRVLEK 118 +KY ++T LA A M ++EK Sbjct: 75 HGIKYSNKTYLAKFFASMMCELIEK 99 >gi|90422044|ref|YP_530414.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB18] gi|90104058|gb|ABD86095.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB18] Length = 269 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 4/80 (5%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP-LKSMQK--DLPLTQIRSVTLYCD-MSCVL 92 +C CWS++ FI D P + SMQ D P + D ++ L Sbjct: 54 VCAACWSQLSFIAPPYCERLGIPFVYDPGPGILSMQAIADPPAYARARAAVRYDEVARTL 113 Query: 93 VRLLKYHDRTDLAIMMAQWM 112 V LK+HDR DLA M +WM Sbjct: 114 VHALKFHDRVDLAPTMGRWM 133 >gi|182678125|ref|YP_001832271.1| phosphoribosyltransferase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634008|gb|ACB94782.1| phosphoribosyltransferase [Beijerinckia indica subsp. indica ATCC 9039] Length = 264 Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPLKSMQ--KDL 74 I+P +C + I LC CW K+ FI E + ++ +D L S + + Sbjct: 36 IFPPLCLCCRKAIASTGALCPECWDKVRFIERPFCERLGTPFSMDLGQDGLLSPEAVANP 95 Query: 75 PL-TQIRSVTLYCDMSCV--LVRLLKYHDRTDLAIMMAQWMFRV 115 P+ + R+V + D V LV LKY DR ++A + WM R Sbjct: 96 PVYGRARAVAQF-DEGPVRHLVHRLKYGDRLEVARPLGLWMARA 138 >gi|91794147|ref|YP_563798.1| putative thiol-disulphide oxidoreductase DCC [Shewanella denitrificans OS217] gi|91716149|gb|ABE56075.1| putative thiol-disulphide oxidoreductase DCC [Shewanella denitrificans OS217] Length = 176 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 10/83 (12%) Query: 38 CGHCWSKIHFITATEHILKNNKDNID--------KDPLKSMQKD--LPLTQIRSVTLYCD 87 C C S ++FI A +H N + + D K++ K+ +P QI S+T Sbjct: 40 CNLCHSAVNFIIARDHTAANPQAALGVFRFAPLQGDSAKALMKECAIPQAQIDSLTSTQS 99 Query: 88 MSCVLVRLLKYHDRTDLAIMMAQ 110 S VL+ +Y+ R+D A+ +A+ Sbjct: 100 GSFVLIDAGRYYFRSDAALEVAR 122 >gi|330994801|ref|ZP_08318723.1| Protein gntX [Gluconacetobacter sp. SXCC-1] gi|329758062|gb|EGG74584.1| Protein gntX [Gluconacetobacter sp. SXCC-1] Length = 236 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 6/82 (7%) Query: 37 LCGHCWSKIHFITA------TEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSC 90 LC C +IH ITA D + + P + R+ +Y D Sbjct: 20 LCATCVGRIHLITAPFCHCCVMPFTSRAAGGPDLTCVACRENPPPWREARAAMVYDDTPR 79 Query: 91 VLVRLLKYHDRTDLAIMMAQWM 112 L+ LKY DRT+ A ++A++M Sbjct: 80 TLILPLKYADRTENAALLARYM 101 >gi|262041687|ref|ZP_06014879.1| rhamnulokinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040949|gb|EEW42028.1| rhamnulokinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 345 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 25/45 (55%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA 50 Q V EL CI+ S+ +Y+R++N L GH +S++H + Sbjct: 215 QPVPESDAELARCIFDSLALLYARVLNELAALRGHPFSQLHIVGG 259 >gi|302338222|ref|YP_003803428.1| DNA polymerase III gamma/tau subunits [Spirochaeta smaragdinae DSM 11293] gi|301635407|gb|ADK80834.1| DNA polymerase III gamma/tau subunits [Spirochaeta smaragdinae DSM 11293] Length = 405 Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 25/35 (71%) Query: 52 EHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYC 86 E I+K+N +++K S+ K++P+ QIR++T +C Sbjct: 159 EKIVKSNASHVEKICGSSVSKNIPIDQIRNITYWC 193 >gi|187608115|ref|NP_001119942.1| potassium voltage-gated channel subfamily D member 1 [Danio rerio] gi|169145712|emb|CAQ15506.1| novel protein similar to vertebrate potassium voltage-gated channel, Shal-related subfamily, member 1 (KCND1) [Danio rerio] gi|169158699|emb|CAQ14871.1| novel protein similar to vertebrate potassium voltage-gated channel, Shal-related subfamily, member 1 (KCND1) [Danio rerio] Length = 632 Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 54 ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDLAIMMAQWM 112 ++ N + + PLK +KDLP + S+ +C D +CVL+ +Y R A ++M Sbjct: 199 VIANVVETVPCRPLKGSKKDLPCGEKYSLAFFCMDTACVLIFTFEYLMRLFAAPSRCKFM 258 Query: 113 FRVLEKI 119 V+ I Sbjct: 259 RSVMSVI 265 >gi|225849074|ref|YP_002729238.1| amino acid permease-associated region [Sulfurihydrogenibium azorense Az-Fu1] gi|225644303|gb|ACN99353.1| amino acid permease-associated region [Sulfurihydrogenibium azorense Az-Fu1] Length = 460 Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 30/55 (54%) Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 KDP K++ K L L+ S LY +S VLV +L Y+ +A M++V EK Sbjct: 244 KDPQKTLPKGLILSLSISTVLYITVSFVLVGILPYYSYEGKPDSLAYAMYQVNEK 298 Searching..................................................done Results from round 2 >gi|256158382|ref|ZP_05456280.1| putative competence protein F [Brucella ceti M490/95/1] gi|256253801|ref|ZP_05459337.1| putative competence protein F [Brucella ceti B1/94] gi|260169308|ref|ZP_05756119.1| putative competence protein F [Brucella sp. F5/99] gi|261220934|ref|ZP_05935215.1| phosphoribosyltransferase [Brucella ceti B1/94] gi|261758821|ref|ZP_06002530.1| competence protein F [Brucella sp. F5/99] gi|265996894|ref|ZP_06109451.1| phosphoribosyltransferase [Brucella ceti M490/95/1] gi|260919518|gb|EEX86171.1| phosphoribosyltransferase [Brucella ceti B1/94] gi|261738805|gb|EEY26801.1| competence protein F [Brucella sp. F5/99] gi|262551362|gb|EEZ07352.1| phosphoribosyltransferase [Brucella ceti M490/95/1] Length = 262 Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|306842968|ref|ZP_07475602.1| competence protein F [Brucella sp. BO2] gi|306286896|gb|EFM58421.1| competence protein F [Brucella sp. BO2] Length = 262 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|306844850|ref|ZP_07477433.1| competence protein F [Brucella sp. BO1] gi|306274782|gb|EFM56563.1| competence protein F [Brucella sp. BO1] Length = 262 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|163843904|ref|YP_001628308.1| protein gntX [Brucella suis ATCC 23445] gi|254707589|ref|ZP_05169417.1| putative competence protein F [Brucella pinnipedialis M163/99/10] gi|254708873|ref|ZP_05170684.1| putative competence protein F [Brucella pinnipedialis B2/94] gi|254713704|ref|ZP_05175515.1| putative competence protein F [Brucella ceti M644/93/1] gi|254715946|ref|ZP_05177757.1| putative competence protein F [Brucella ceti M13/05/1] gi|256030399|ref|ZP_05444013.1| putative competence protein F [Brucella pinnipedialis M292/94/1] gi|256059857|ref|ZP_05450044.1| putative competence protein F [Brucella neotomae 5K33] gi|256370278|ref|YP_003107789.1| competence protein F, putative [Brucella microti CCM 4915] gi|261217709|ref|ZP_05931990.1| phosphoribosyltransferase [Brucella ceti M13/05/1] gi|261315076|ref|ZP_05954273.1| phosphoribosyltransferase [Brucella pinnipedialis M163/99/10] gi|261316366|ref|ZP_05955563.1| phosphoribosyltransferase [Brucella pinnipedialis B2/94] gi|261321444|ref|ZP_05960641.1| phosphoribosyltransferase [Brucella ceti M644/93/1] gi|261323827|ref|ZP_05963024.1| phosphoribosyltransferase [Brucella neotomae 5K33] gi|265987438|ref|ZP_06099995.1| phosphoribosyltransferase [Brucella pinnipedialis M292/94/1] gi|163674627|gb|ABY38738.1| Protein gntX [Brucella suis ATCC 23445] gi|256000441|gb|ACU48840.1| competence protein F, putative [Brucella microti CCM 4915] gi|260922798|gb|EEX89366.1| phosphoribosyltransferase [Brucella ceti M13/05/1] gi|261294134|gb|EEX97630.1| phosphoribosyltransferase [Brucella ceti M644/93/1] gi|261295589|gb|EEX99085.1| phosphoribosyltransferase [Brucella pinnipedialis B2/94] gi|261299807|gb|EEY03304.1| phosphoribosyltransferase [Brucella neotomae 5K33] gi|261304102|gb|EEY07599.1| phosphoribosyltransferase [Brucella pinnipedialis M163/99/10] gi|264659635|gb|EEZ29896.1| phosphoribosyltransferase [Brucella pinnipedialis M292/94/1] Length = 262 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|319407556|emb|CBI81206.1| competence protein ComF [Bartonella sp. 1-1C] Length = 247 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 + +I L +YP C ++I++ +C CW + FIT + D Sbjct: 1 MNKLIKRLIKILYPPTCHGCAKIVSAYGTICSDCWQDLQFITKPYCPVMGTPFAYDMGEG 60 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++Q P + +RS ++ ++ VL LKY DR +LA MA WM +I Sbjct: 61 FLSGEAIQNPPPFSSLRSAVVHKGLARVLTTRLKYGDRLELAPFMANWMIFAGHEI 116 >gi|161619796|ref|YP_001593683.1| protein gntX [Brucella canis ATCC 23365] gi|260567631|ref|ZP_05838101.1| competence protein F [Brucella suis bv. 4 str. 40] gi|161336607|gb|ABX62912.1| Protein gntX [Brucella canis ATCC 23365] gi|260157149|gb|EEW92229.1| competence protein F [Brucella suis bv. 4 str. 40] Length = 262 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|254700524|ref|ZP_05162352.1| putative competence protein F [Brucella suis bv. 5 str. 513] gi|261751028|ref|ZP_05994737.1| phosphoribosyltransferase [Brucella suis bv. 5 str. 513] gi|261740781|gb|EEY28707.1| phosphoribosyltransferase [Brucella suis bv. 5 str. 513] Length = 262 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|319404563|emb|CBI78169.1| competence protein ComF [Bartonella rochalimae ATCC BAA-1498] Length = 247 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 + +I L +YP C ++I++ +C CW + FIT + D Sbjct: 1 MNKLIKRLIKILYPPTCHGCAKIVSAYGTICSDCWKDLQFITKPYCPVMGTPFAYDMGEG 60 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++Q P + +RS ++ ++ VL LKY DR +LA MA WM +I Sbjct: 61 FLSGEAIQNPPPFSSLRSAVVHKGLARVLTTRLKYGDRLELAPFMANWMIFAGHEI 116 >gi|23502731|ref|NP_698858.1| competence protein F [Brucella suis 1330] gi|254704895|ref|ZP_05166723.1| putative competence protein F [Brucella suis bv. 3 str. 686] gi|261755589|ref|ZP_05999298.1| phosphoribosyltransferase [Brucella suis bv. 3 str. 686] gi|23348747|gb|AAN30773.1| competence protein F, putative [Brucella suis 1330] gi|261745342|gb|EEY33268.1| phosphoribosyltransferase [Brucella suis bv. 3 str. 686] Length = 262 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|225628082|ref|ZP_03786117.1| protein gntX [Brucella ceti str. Cudo] gi|225616907|gb|EEH13954.1| protein gntX [Brucella ceti str. Cudo] Length = 290 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 46 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 105 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 106 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 165 Query: 119 I 119 + Sbjct: 166 L 166 >gi|148560259|ref|YP_001259705.1| putative competence protein F [Brucella ovis ATCC 25840] gi|148371516|gb|ABQ61495.1| putative competence protein F [Brucella ovis ATCC 25840] Length = 262 Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|62290737|ref|YP_222530.1| competence protein F [Brucella abortus bv. 1 str. 9-941] gi|82700649|ref|YP_415223.1| competence protein F [Brucella melitensis biovar Abortus 2308] gi|189024949|ref|YP_001935717.1| competence protein F [Brucella abortus S19] gi|254690026|ref|ZP_05153280.1| putative competence protein F [Brucella abortus bv. 6 str. 870] gi|254694515|ref|ZP_05156343.1| putative competence protein F [Brucella abortus bv. 3 str. Tulya] gi|254696140|ref|ZP_05157968.1| putative competence protein F [Brucella abortus bv. 2 str. 86/8/59] gi|254731058|ref|ZP_05189636.1| putative competence protein F [Brucella abortus bv. 4 str. 292] gi|256258280|ref|ZP_05463816.1| putative competence protein F [Brucella abortus bv. 9 str. C68] gi|260546000|ref|ZP_05821740.1| competence protein F [Brucella abortus NCTC 8038] gi|260755561|ref|ZP_05867909.1| phosphoribosyltransferase [Brucella abortus bv. 6 str. 870] gi|260758784|ref|ZP_05871132.1| phosphoribosyltransferase [Brucella abortus bv. 4 str. 292] gi|260760508|ref|ZP_05872851.1| phosphoribosyltransferase [Brucella abortus bv. 2 str. 86/8/59] gi|260884585|ref|ZP_05896199.1| phosphoribosyltransferase [Brucella abortus bv. 9 str. C68] gi|261214832|ref|ZP_05929113.1| phosphoribosyltransferase [Brucella abortus bv. 3 str. Tulya] gi|297247124|ref|ZP_06930842.1| competence protein ComFC [Brucella abortus bv. 5 str. B3196] gi|62196869|gb|AAX75169.1| competence protein F, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82616750|emb|CAJ11836.1| competence protein F [Brucella melitensis biovar Abortus 2308] gi|189020521|gb|ACD73243.1| competence protein F [Brucella abortus S19] gi|260096107|gb|EEW79983.1| competence protein F [Brucella abortus NCTC 8038] gi|260669102|gb|EEX56042.1| phosphoribosyltransferase [Brucella abortus bv. 4 str. 292] gi|260670940|gb|EEX57761.1| phosphoribosyltransferase [Brucella abortus bv. 2 str. 86/8/59] gi|260675669|gb|EEX62490.1| phosphoribosyltransferase [Brucella abortus bv. 6 str. 870] gi|260874113|gb|EEX81182.1| phosphoribosyltransferase [Brucella abortus bv. 9 str. C68] gi|260916439|gb|EEX83300.1| phosphoribosyltransferase [Brucella abortus bv. 3 str. Tulya] gi|297174293|gb|EFH33640.1| competence protein ComFC [Brucella abortus bv. 5 str. B3196] Length = 262 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|17986467|ref|NP_539101.1| competence protein F [Brucella melitensis bv. 1 str. 16M] gi|225853317|ref|YP_002733550.1| competence protein F [Brucella melitensis ATCC 23457] gi|256045489|ref|ZP_05448372.1| putative competence protein F [Brucella melitensis bv. 1 str. Rev.1] gi|256263196|ref|ZP_05465728.1| competence protein F [Brucella melitensis bv. 2 str. 63/9] gi|260562798|ref|ZP_05833284.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265991911|ref|ZP_06104468.1| phosphoribosyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|17982065|gb|AAL51365.1| competence protein f [Brucella melitensis bv. 1 str. 16M] gi|225641682|gb|ACO01596.1| competence protein F [Brucella melitensis ATCC 23457] gi|260152814|gb|EEW87906.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|263002977|gb|EEZ15270.1| phosphoribosyltransferase [Brucella melitensis bv. 1 str. Rev.1] gi|263093118|gb|EEZ17253.1| competence protein F [Brucella melitensis bv. 2 str. 63/9] gi|326409880|gb|ADZ66945.1| competence protein F [Brucella melitensis M28] Length = 262 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|326539594|gb|ADZ87809.1| competence protein F [Brucella melitensis M5-90] Length = 251 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 7 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 66 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 67 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 126 Query: 119 I 119 + Sbjct: 127 L 127 >gi|254717947|ref|ZP_05179758.1| protein gntX [Brucella sp. 83/13] gi|265982890|ref|ZP_06095625.1| phosphoribosyltransferase [Brucella sp. 83/13] gi|306838253|ref|ZP_07471103.1| competence protein F [Brucella sp. NF 2653] gi|264661482|gb|EEZ31743.1| phosphoribosyltransferase [Brucella sp. 83/13] gi|306406656|gb|EFM62885.1| competence protein F [Brucella sp. NF 2653] Length = 262 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERSYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM + Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQHAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|256112214|ref|ZP_05453135.1| competence protein F [Brucella melitensis bv. 3 str. Ether] gi|265993642|ref|ZP_06106199.1| phosphoribosyltransferase [Brucella melitensis bv. 3 str. Ether] gi|262764623|gb|EEZ10544.1| phosphoribosyltransferase [Brucella melitensis bv. 3 str. Ether] Length = 262 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 78 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137 Query: 119 I 119 + Sbjct: 138 L 138 >gi|237816244|ref|ZP_04595237.1| competence protein F [Brucella abortus str. 2308 A] gi|237788311|gb|EEP62526.1| competence protein F [Brucella abortus str. 2308 A] Length = 290 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + ++ + ++P+ C ++ LC CWS + FI + Sbjct: 46 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 105 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 106 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 165 Query: 119 I 119 + Sbjct: 166 L 166 >gi|319899208|ref|YP_004159301.1| competence protein ComF [Bartonella clarridgeiae 73] gi|319403172|emb|CBI76731.1| competence protein ComF [Bartonella clarridgeiae 73] Length = 247 Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 + +I L +YP IC ++I++ +C CW + FIT + D Sbjct: 1 MNKLIKRLITILYPPICHGCAKIVSAYGTICSDCWKDLQFITKPYCPVMGTPFAYDMGEG 60 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++Q P + +RS ++ ++ LV LKY DR +LA MA M +I Sbjct: 61 FLSGEAIQNSPPFSSLRSAVVHKGLARTLVTRLKYGDRLELASFMANSMIFAGHEI 116 >gi|254780310|ref|YP_003064723.1| hypothetical protein CLIBASIA_00975 [Candidatus Liberibacter asiaticus str. psy62] gi|254039987|gb|ACT56783.1| hypothetical protein CLIBASIA_00975 [Candidatus Liberibacter asiaticus str. psy62] Length = 119 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD Sbjct: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI Sbjct: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 >gi|239832955|ref|ZP_04681284.1| competence protein F [Ochrobactrum intermedium LMG 3301] gi|239825222|gb|EEQ96790.1| competence protein F [Ochrobactrum intermedium LMG 3301] Length = 288 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 + Q V + ++P C ++ LC CW ++ FI + + Sbjct: 44 GLRQLVGRAVRSSADTLFPPTCIGCRMHVSEPGTLCPKCWPELRFIERPYCPVLGIPFSH 103 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R + Sbjct: 104 DFGENFMSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 163 Query: 119 I 119 + Sbjct: 164 L 164 >gi|49475199|ref|YP_033240.1| competence protein comF [Bartonella henselae str. Houston-1] gi|49238004|emb|CAF27209.1| Competence protein comF [Bartonella henselae str. Houston-1] Length = 262 Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 4/118 (3%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 + L +YP ICP + ++ +C CW + FIT + D Sbjct: 14 NILSKFTERLLTILYPPICPGCKQRVSAYGTICSECWKDLQFITKPYCPVMGVPFVYDMG 73 Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++Q LP +++RSV ++ ++ LV LKY D +LA MA WM +I Sbjct: 74 DGFLSGEALQNSLPFSRVRSVIVHKGVAQSLVTRLKYGDHVELASFMANWMVSAGREI 131 >gi|153008363|ref|YP_001369578.1| competence protein F [Ochrobactrum anthropi ATCC 49188] gi|151560251|gb|ABS13749.1| competence protein F, putative [Ochrobactrum anthropi ATCC 49188] Length = 262 Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 4/116 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 ++P C ++ LC CW ++ FI + + D Sbjct: 23 AGRAFRSSADMLFPPTCIGCRAHVSEPGTLCPKCWPELRFIERPYCPVLGIPFSHDFGDN 82 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++ P ++RS L+ + + LK+HDRTDLA MA+WM R ++ Sbjct: 83 FTSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGREL 138 >gi|319781332|ref|YP_004140808.1| phosphoribosyltransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167220|gb|ADV10758.1| phosphoribosyltransferase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 266 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 I +S++ ++P +C R ++ LCG CW K+ + + Sbjct: 12 GITNLARSVVGWPARMLFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTH 71 Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +++ P + R+ Y ++ +V+ LKY DRTDLA MA+WM R Sbjct: 72 HMGEGFLSAEAIADPPPFERARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMMRAGAD 131 Query: 119 I 119 + Sbjct: 132 L 132 >gi|319408180|emb|CBI81833.1| competence protein ComF [Bartonella schoenbuchensis R1] Length = 247 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 4/116 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 + I L +YP CP +I++ +C CW FIT + D Sbjct: 1 MGKFIESLIKILYPPTCPGCKKIVSAYSTVCSDCWKDFQFITKPYCPVMGIPFAYDMGEG 60 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++Q P +++RSV ++ ++ +L LKY DR +LA M+ WM ++ Sbjct: 61 FLSGEAIQASPPFSRVRSVVVHKGLARLLTIQLKYSDRLELARFMSNWMVLAGREL 116 >gi|260467149|ref|ZP_05813327.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|259029073|gb|EEW30371.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] Length = 266 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 4/118 (3%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 +S + ++P +C R ++ LCG CW K+ + + Sbjct: 15 SLARSALGWPARILFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTHQMG 74 Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++ P + R+ Y ++ +V+ LKY DRTDLA MA+WM R + Sbjct: 75 EGFLSAEAIADPPPFDRARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMVRAGADL 132 >gi|163867840|ref|YP_001609044.1| competence protein ComF [Bartonella tribocorum CIP 105476] gi|161017491|emb|CAK01049.1| competence protein ComF [Bartonella tribocorum CIP 105476] Length = 261 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----P 66 I +YP ICP + ++ +C CW + FIT + D Sbjct: 18 FIERFKTMLYPPICPGCKQNVSTYGTICSECWKDLQFITKPYCPVMGTPFVCDMGDGFLS 77 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++++ P +++RSV ++ ++ LV LKY D +LA MA WM ++ Sbjct: 78 GEALRSSYPFSRVRSVIVHKGLARTLVTRLKYGDHIELASFMANWMVSAGREV 130 >gi|49473949|ref|YP_031991.1| competence protein comF [Bartonella quintana str. Toulouse] gi|49239452|emb|CAF25803.1| Competence protein comF [Bartonella quintana str. Toulouse] Length = 261 Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 + I L +YP ICP + ++ +C CW + FIT + D Sbjct: 15 LNKCIECLLTILYPPICPGCKQKVSAYGAICSQCWKDLQFITKPYCPVMGIPFGCDMGDG 74 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++Q P +++RS ++ ++ LV LKY D +L MA WM +I Sbjct: 75 FLSGEALQNLPPFSRVRSAIVHKGVAQALVTRLKYGDHIELVSFMANWMVFAGREI 130 >gi|240850049|ref|YP_002971442.1| competence protein ComF [Bartonella grahamii as4aup] gi|240267172|gb|ACS50760.1| competence protein ComF [Bartonella grahamii as4aup] Length = 261 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 4/116 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 + I L +YP ICP + ++ +C CW + FIT + D Sbjct: 15 LSKFIERLKTVLYPPICPGCKQNVSTYGTICSECWKDLQFITKPYCPVMGTPFVCDMGDG 74 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++++ P +++RS ++ ++ LV LKY D +LA MA WM ++ Sbjct: 75 FLSGEALRNSHPFSRVRSAIVHKGLARALVTRLKYGDHIELASFMANWMMFAGREV 130 >gi|121601823|ref|YP_988686.1| comF family protein [Bartonella bacilliformis KC583] gi|120614000|gb|ABM44601.1| comF family protein [Bartonella bacilliformis KC583] Length = 251 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 4/115 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 + I L +YP CP I++ +C CW + FIT + D Sbjct: 5 LGKFIKRLMAVVYPPTCPGCKVIVSAHGTICADCWKDLQFITKPYCPIMGIPFACDMGDG 64 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +++Q P +++RS + ++ L LKY DR +LA MA WM + Sbjct: 65 FLSGEALQTSYPFSRVRSAIAHKGLARTLTIRLKYGDRVELAQFMANWMVFAGRE 119 >gi|126738463|ref|ZP_01754168.1| competence protein F, putative [Roseobacter sp. SK209-2-6] gi|126720262|gb|EBA16968.1| competence protein F, putative [Roseobacter sp. SK209-2-6] Length = 242 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 5/117 (4%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNI 62 +++ IYP C ++ F LCG CW + HFI+ T L D Sbjct: 2 LRAQFQTAVSLIYPPRCLGCDELVEQDFGLCGTCWGQTHFISGTVCEGCGIPLPGEGDGY 61 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + M P +Q R+ LY D + LV LK+ DRTDLA A W+ R + Sbjct: 62 HLECDECMSTPRPWSQGRAAMLYKDKARSLVMALKHGDRTDLAAPAAHWIERAAGPL 118 >gi|190893598|ref|YP_001980140.1| competence protein F (phosphoribosyltransferase) [Rhizobium etli CIAT 652] gi|190698877|gb|ACE92962.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli CIAT 652] Length = 258 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 5/119 (4%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 Q ++ L +YP C + LC CW+ I FI + + D Sbjct: 14 RTQLLRPFSA-LADFLYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHD 72 Query: 64 KDPL----KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +++ P ++RS + LV LKY DRTDLA MMA WM R + Sbjct: 73 LGAGIVSAEAIANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 131 >gi|327193402|gb|EGE60302.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli CNPAF512] Length = 258 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 5/119 (4%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 Q ++ L +YP C + LC CW+ I FI + + D Sbjct: 14 RTQLLRPFSA-LADFLYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHD 72 Query: 64 KDPL----KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +++ K P ++RS + LV LKY DRTDLA MMA WM R + Sbjct: 73 LGAGILSAEAIAKPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 131 >gi|114704317|ref|ZP_01437225.1| hypothetical protein FP2506_05271 [Fulvimarina pelagi HTCC2506] gi|114539102|gb|EAU42222.1| hypothetical protein FP2506_05271 [Fulvimarina pelagi HTCC2506] Length = 249 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 4/118 (3%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 Q +++ + ++P IC I LC CWS++ FI + + D Sbjct: 6 QRTLTLLRLIGDLLFPPICTSCGIGIGKPAGLCSSCWSELRFIERPFCDILCLPFSYDPG 65 Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 K++ P ++RSV LY D + LV LKY DR DL +MA WM R I Sbjct: 66 EGVVSAKAIAHPPPFEKLRSVVLYDDRARRLVSALKYRDRLDLVPLMAAWMVRAGRDI 123 >gi|86359347|ref|YP_471239.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli CFN 42] gi|86283449|gb|ABC92512.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli CFN 42] Length = 258 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 4/108 (3%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSM 70 L +YP C + LC CWS I FI + + D +++ Sbjct: 24 LADFLYPPACSVCGISTGGHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAI 83 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 P ++RS + LV LKY DRTDLA MMA WM R + Sbjct: 84 ANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 131 >gi|209551108|ref|YP_002283025.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536864|gb|ACI56799.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 258 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 5/119 (4%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 Q ++ L +YP C + +C CWS I FI + + D Sbjct: 14 RAQLLRPFSA-LADFLYPPACSVCGISTGGHRGVCAKCWSGIRFIERPYCEVLGIPFSHD 72 Query: 64 KDPL----KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +++ P ++RS + LV LKY DRTDLA MMA WM R + Sbjct: 73 LGAGILSAEAIANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAAWMLRASDG 131 >gi|260431723|ref|ZP_05785694.1| competence protein F [Silicibacter lacuscaerulensis ITI-1157] gi|260415551|gb|EEX08810.1| competence protein F [Silicibacter lacuscaerulensis ITI-1157] Length = 254 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 5/115 (4%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDK 64 I +YP C + F LCG CW + FI L D Sbjct: 15 RRIQTAIEVVYPPRCIGCGELTESDFGLCGPCWRETPFIGGLVCASCGVPLPGEDDGHRI 74 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + M++ P ++ R LY + LV K+ DRT+LA A+WM R + + Sbjct: 75 ECDDCMRQPPPWSEGRGALLYKGKARALVLAFKHGDRTELARPAARWMARAGQSL 129 >gi|241206509|ref|YP_002977605.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860399|gb|ACS58066.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 258 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 4/108 (3%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSM 70 L YP C + LC CWS I FI + D +++ Sbjct: 24 LADFFYPPACSVCGISTGGHRGLCAKCWSGIRFIERPYCEVLGIPFLHDLGAGILSAEAI 83 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 P ++RS + LV LKY DRTDLA MMA WM R + Sbjct: 84 ANPPPFDRLRSAATHDRAVRDLVHGLKYRDRTDLAPMMAAWMLRASDG 131 >gi|13472985|ref|NP_104552.1| hypothetical protein mll3453 [Mesorhizobium loti MAFF303099] gi|14023733|dbj|BAB50338.1| mll3453 [Mesorhizobium loti MAFF303099] Length = 240 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKD 73 ++P +C R ++ LCG CW K+ + + +++ Sbjct: 1 MLFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTHHMGEGFLSAEAIADP 60 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + R+ Y ++ +V+ LKY DRTDLA MA+WM R + Sbjct: 61 PPFERARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMVRAGADL 106 >gi|159185776|ref|NP_357098.2| competence protein F [Agrobacterium tumefaciens str. C58] gi|159140910|gb|AAK89883.2| competence protein F [Agrobacterium tumefaciens str. C58] Length = 263 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 4/119 (3%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 + +++ F +YP C +R+ LC CW + FI + D Sbjct: 18 VPSAARAVARSFFRLVYPPTCAGCNRMTGGEGALCPDCWRDVAFIDRPFCEVLGIPFARD 77 Query: 64 KD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +++ P ++RSV + + LV LKY DRTDLA ++A WM R + Sbjct: 78 HGEGVVSGRAIADPPPFDRLRSVASHEGTARKLVHRLKYQDRTDLARLIALWMLRASDG 136 >gi|163737955|ref|ZP_02145371.1| competence protein F, putative [Phaeobacter gallaeciensis BS107] gi|161388571|gb|EDQ12924.1| competence protein F, putative [Phaeobacter gallaeciensis BS107] Length = 242 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 5/117 (4%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNI 62 +K+ I IYP C ++ F LCG CW FI+ T L D Sbjct: 2 LKARIQTAVSLIYPPRCLACGDWVDSDFGLCGPCWRDTPFISGTCCDGCGVALMGEGDGF 61 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + M P Q R+ Y + L+ LK+ DRT++A A+W+ R + Sbjct: 62 RLECDDCMAHPRPWQQGRAALSYEGTARRLILALKHGDRTEIARPAARWLTRAAATL 118 >gi|218462813|ref|ZP_03502904.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli Kim 5] Length = 169 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 5/119 (4%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 Q ++ L +YP C + LC CWS I FI + + D Sbjct: 14 RTQFLRPFSA-LVDFLYPPTCSVCGVSAGGHRGLCAKCWSGIRFIERPYCEVLGIPFSHD 72 Query: 64 KDPL----KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +++ P ++RS + LV LKY DRTDLA MMA WM R + Sbjct: 73 LGAGILSAEAIANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 131 >gi|110635335|ref|YP_675543.1| phosphoribosyltransferase [Mesorhizobium sp. BNC1] gi|110286319|gb|ABG64378.1| phosphoribosyltransferase [Chelativorans sp. BNC1] Length = 270 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 4/123 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 M A Q I + P +C ++ LC CW ++ F+ + Sbjct: 14 MGAFRQAATMIREWPARLLSPPVCIGCRNLVTAPGTLCPECWPELRFLEQPWCPVMGTPF 73 Query: 61 NIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 D +++ P + RS Y ++ +V LK+ DRTDLA MA+WM R Sbjct: 74 PHDMGEGFLSGEAIANPPPFARARSAVAYRGVAGRMVLSLKFSDRTDLAPWMARWMLRAA 133 Query: 117 EKI 119 ++ Sbjct: 134 VEL 136 >gi|86136799|ref|ZP_01055377.1| competence protein F, putative [Roseobacter sp. MED193] gi|85826123|gb|EAQ46320.1| competence protein F, putative [Roseobacter sp. MED193] Length = 242 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 5/117 (4%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNI 62 +++ +YP C + F LCG CW + HFI+ T L ++D Sbjct: 2 LRAQFQTAVSLVYPPKCLGCDEFVEQDFGLCGGCWGEAHFISGTVCEGCGVPLPGDEDGY 61 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 D + M P +Q R+ LY D + LV LK+ DRTDLA A W+ R + Sbjct: 62 RLDCDECMSMSRPWSQGRAAMLYKDKARNLVMALKHGDRTDLAAPAAGWIERAAAPL 118 >gi|254464782|ref|ZP_05078193.1| competence protein F [Rhodobacterales bacterium Y4I] gi|206685690|gb|EDZ46172.1| competence protein F [Rhodobacterales bacterium Y4I] Length = 242 Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 I IYP C ++ F LCG CWS + FI+ T L D + Sbjct: 6 IQTAVSLIYPPQCMGCGGLVGSDFGLCGTCWSGMSFISGTVCEGCGVPLPGEADGFRLEC 65 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ P +Q RS +Y LV LK+ DRT++A A W+ R + + Sbjct: 66 DSCLRHPRPWSQGRSALIYEGQGRKLVLALKHGDRTEIAQTAAVWLERAAQPM 118 >gi|304394136|ref|ZP_07376059.1| competence protein F [Ahrensia sp. R2A130] gi|303293576|gb|EFL87953.1| competence protein F [Ahrensia sp. R2A130] Length = 273 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 4/107 (3%) Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQK 72 I+P++C R ++ + LC CW ++ FI + + D +++ Sbjct: 35 DAIWPAVCLACERPVDKQGSLCPTCWGEMRFIERPYCAVMGSPFTYDLGEGALSAEAIAD 94 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + RSV LY D++ +V LK+ DRT+LA MAQWM R + + Sbjct: 95 PPPFDRCRSVVLYDDVARRMVSSLKFSDRTELAPWMAQWMVRASDGM 141 >gi|90420200|ref|ZP_01228108.1| competence protein F [Aurantimonas manganoxydans SI85-9A1] gi|90335534|gb|EAS49284.1| competence protein F [Aurantimonas manganoxydans SI85-9A1] Length = 249 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 4/114 (3%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---- 65 +I + ++P +CP + +C CW K+ FI + D Sbjct: 10 AITGSIGRLLFPPVCPGCQAAVTGSGTVCCACWPKLRFIERPYCEVLGLPFAYDLGKGFL 69 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++ + P ++R+ LY D++ LV LKY DRTDL +MA WM R ++ Sbjct: 70 SAEAIAEPPPFARLRAAVLYEDLAARLVSSLKYADRTDLVPLMAGWMTRAGAEL 123 >gi|116254026|ref|YP_769864.1| hypothetical protein RL4290 [Rhizobium leguminosarum bv. viciae 3841] gi|115258674|emb|CAK09778.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 246 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 4/108 (3%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSM 70 L YP C + + LC CWS I FI + + D +++ Sbjct: 12 LADFFYPPACSVCGISTGVHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAI 71 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 ++RS + LV LKY DRTDLA MMA WM R + Sbjct: 72 ANPPAFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAAWMLRASDG 119 >gi|222149922|ref|YP_002550879.1| competence protein F [Agrobacterium vitis S4] gi|221736904|gb|ACM37867.1| competence protein F [Agrobacterium vitis S4] Length = 236 Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 4/106 (3%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSM 70 L +YP C + LC CW + FI + D +++ Sbjct: 2 LRDLVYPPGCATCGLPVAKAGSLCSDCWCSVRFIERPYCEILGLPFGFDPGQGMVCAEAI 61 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 ++R+ ++ + LV LKY DRTDLA MMA WM R Sbjct: 62 ANPPVFDRLRAAVVHDGAARDLVHRLKYGDRTDLAPMMAHWMIRAG 107 >gi|15966372|ref|NP_386725.1| hypothetical protein SMc02444 [Sinorhizobium meliloti 1021] gi|307313041|ref|ZP_07592668.1| phosphoribosyltransferase [Sinorhizobium meliloti BL225C] gi|307321047|ref|ZP_07600453.1| phosphoribosyltransferase [Sinorhizobium meliloti AK83] gi|15075643|emb|CAC47198.1| Putative competence protein F [Sinorhizobium meliloti 1021] gi|306893322|gb|EFN24102.1| phosphoribosyltransferase [Sinorhizobium meliloti AK83] gi|306899360|gb|EFN29994.1| phosphoribosyltransferase [Sinorhizobium meliloti BL225C] Length = 248 Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 4/115 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 ++ I + I+P +C R+ +C CW+ + FI + D Sbjct: 7 LRRISAQAVDLIFPPVCSGCGRLTGYAHAVCASCWAGMPFIERPYCEVLGLPFAYDPGES 66 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +++ ++RSV ++ + LV LKY DRTDLA MMA+WM R + Sbjct: 67 AVSPEAIANPPVFDRLRSVAIHEGIVRDLVHGLKYRDRTDLAPMMAEWMIRASDG 121 >gi|227823196|ref|YP_002827168.1| putative competence protein F [Sinorhizobium fredii NGR234] gi|227342197|gb|ACP26415.1| putative competence protein F [Sinorhizobium fredii NGR234] Length = 281 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 4/108 (3%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSM 70 + ++P +C R+ +C CW+ + I + + D P +++ Sbjct: 47 AVNLVFPPVCCGCGRLTGDAHAVCPSCWAGLRLIERPYCEILGSPFAFDPGPGAVSPQAI 106 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 ++RS +L+ ++ LV LKY DRTDLA MMA+WM R + Sbjct: 107 ANPPDFDRLRSASLHEGIARDLVHGLKYRDRTDLAPMMAEWMIRASDG 154 >gi|259418155|ref|ZP_05742074.1| competence protein F [Silicibacter sp. TrichCH4B] gi|259347061|gb|EEW58875.1| competence protein F [Silicibacter sp. TrichCH4B] Length = 243 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 5/118 (4%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDN 61 T+++ I +YP+ C ++ F LC CW FI+ L D Sbjct: 2 TLRARIQTAVSLVYPARCLNCGGLVESDFGLCSACWRDTTFISGLVCDCCGVPLPGEADG 61 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + Q R+ LY LV LK+ DRTDLA + WM R + Sbjct: 62 QSVHCDECLSSPRDWEQGRAAILYGGQGRRLVLALKHGDRTDLARPASGWMARAARDL 119 >gi|56694999|ref|YP_165345.1| competence protein F, putative [Ruegeria pomeroyi DSS-3] gi|56676736|gb|AAV93402.1| competence protein F, putative [Ruegeria pomeroyi DSS-3] Length = 242 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 I +YP C ++ F LCG CW FI T L +D + Sbjct: 5 IQTAIETVYPPRCLGCGDLVTSDFGLCGKCWRDTPFIDGTVCDSCGAPLPGARDGHRIEC 64 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 M P + R+ LY + +V LK+ DR +LA WM R + Sbjct: 65 DDCMAHPRPWSDGRAALLYTGRARRMVLALKHGDRPELARPGGLWMARAAAPL 117 >gi|150397708|ref|YP_001328175.1| phosphoribosyltransferase [Sinorhizobium medicae WSM419] gi|150029223|gb|ABR61340.1| phosphoribosyltransferase [Sinorhizobium medicae WSM419] Length = 258 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 4/118 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 + ++ + + ++P +C R+ +C CW+KI I + Sbjct: 10 IRDRAGPLRRLAALAINLVFPPVCCGCGRLTGDARAVCPSCWAKIPLIERPYCEVLGMPF 69 Query: 61 NIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 D +++ ++RS ++ + LV LKY DRTDLA MMA+WM R Sbjct: 70 TFDPGEGAVSPEAIANPPVFDRLRSAAIHEGIVRDLVHGLKYRDRTDLAPMMAEWMIR 127 >gi|126724616|ref|ZP_01740459.1| Competence protein F [Rhodobacterales bacterium HTCC2150] gi|126705780|gb|EBA04870.1| Competence protein F [Rhodobacterales bacterium HTCC2150] Length = 240 Score = 136 bits (344), Expect = 6e-31, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA-------TEHILKNNKDNIDK 64 + IYP+ C I++ F CG CW + FIT T ++ N + Sbjct: 1 MQTALRIIYPAQCLTCGDIVDSEFGFCGACWRETPFITGLICDLCGTSLPGDASEQNQEL 60 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + M+ P + RS +Y D + V LK+ DR D A A W+ ++ + Sbjct: 61 HCDECMRIARPWEKGRSAMIYKDNARRFVLGLKHGDRLDFARPAANWIAAKMQGL 115 >gi|254486071|ref|ZP_05099276.1| competence protein F [Roseobacter sp. GAI101] gi|214042940|gb|EEB83578.1| competence protein F [Roseobacter sp. GAI101] Length = 242 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 5/114 (4%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDK 64 S + IYP +C ++ + LCG CW + FI T L N Sbjct: 3 SQLQTAVGLIYPPVCLGCNQPVEKTAGLCGPCWRETAFIGGTVCDRCGVPLPGNDVGEMA 62 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 M P Q RS LY + +V LK+ DR ++A A WM R + K Sbjct: 63 HCDACMTDPPPWVQGRSALLYRGIGRKIVLGLKHGDRQEIARPAALWMARAVAK 116 >gi|255262559|ref|ZP_05341901.1| competence protein F [Thalassiobium sp. R2A62] gi|255104894|gb|EET47568.1| competence protein F [Thalassiobium sp. R2A62] Length = 239 Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK--- 68 + +YP+ C ++ LCG CWS FIT D DP + Sbjct: 1 MQSALRILYPTQCVSCDALVEGDTGLCGKCWSDTPFITGAVCGACGAPLIGDVDPEETAY 60 Query: 69 ---SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P R+ TLY + LV LK+ DRTDL ++QWM R + Sbjct: 61 CEACHASPRPWLHGRAATLYSGNARRLVLALKHGDRTDLVPALSQWMARAAAPL 114 >gi|99082742|ref|YP_614896.1| competence protein F, putative [Ruegeria sp. TM1040] gi|99039022|gb|ABF65634.1| competence protein F putative [Ruegeria sp. TM1040] Length = 243 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 5/118 (4%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDN 61 T+++ I +YP+ C ++ F LCG CW FI+ L D Sbjct: 2 TLRARIQTAVSLVYPARCLNCGGLVESDFGLCGACWRDTTFISGLVCEGCGAPLPGEDDG 61 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ + R+ +Y LV LK+ DRTDL + WM R + Sbjct: 62 QMVHCDACLRAPGEWDRGRAALVYTGQGRRLVLALKHGDRTDLVRPASAWMARAARVL 119 >gi|260576133|ref|ZP_05844126.1| competence protein F, putative [Rhodobacter sp. SW2] gi|259021613|gb|EEW24916.1| competence protein F, putative [Rhodobacter sp. SW2] Length = 240 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + H +YP C ++ F LC CW + FIT L Sbjct: 3 LQAALHLVYPPQCLSCDALVTTDFGLCSKCWRETPFITGLVCDKCGTPLPGEDPGNAVHC 62 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P Q R+ LY LV LK+ DR DLA A WM + + Sbjct: 63 DDCLTIARPWVQGRAALLYKGNGRRLVLALKHGDRLDLAKPAAGWMRQAAAPL 115 >gi|110677794|ref|YP_680801.1| competence protein F, putative [Roseobacter denitrificans OCh 114] gi|109453910|gb|ABG30115.1| competence protein F, putative [Roseobacter denitrificans OCh 114] Length = 243 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 +YP C + F LCG CW FI + L + N Sbjct: 6 FQTAVSLVYPPRCLGCGGQVESDFGLCGGCWRDTPFIGGSICDSCGAPLPGDNHNECLKC 65 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 M ++ R+ LY D + LV LK+ DR ++A A WM R +E + Sbjct: 66 DDCMITPRSWSKGRAALLYKDNARRLVLALKHGDRQEIAEPAALWMSRAIEDL 118 >gi|126734442|ref|ZP_01750189.1| Competence protein F [Roseobacter sp. CCS2] gi|126717308|gb|EBA14172.1| Competence protein F [Roseobacter sp. CCS2] Length = 240 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + + IYP C LC CW FI L Sbjct: 3 LQSVIRAIYPPQCVACDAQTEDDNGLCAVCWKDTQFIGGLVCNTCGTPLPGEDHGEVVQC 62 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 M P RSV +Y + LV LK+ DRTDLA A+WM + + + Sbjct: 63 DDCMTIARPWDTGRSVLVYNGVGRRLVLGLKHGDRTDLAPTAARWMAQKMANL 115 >gi|84684631|ref|ZP_01012532.1| competence protein F, putative [Maritimibacter alkaliphilus HTCC2654] gi|84667610|gb|EAQ14079.1| competence protein F, putative [Rhodobacterales bacterium HTCC2654] Length = 238 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHI-----LKNNKDNIDKDP 66 + L IYP+ C I+ LCG CW + F+T L D Sbjct: 1 MQSLLRAIYPAQCASCGEIVEGDGGLCGPCWRETRFVTGHVCDKCGVGLPGESDGHLDLC 60 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 M P +Q R+ Y LV K+ DR D+A A+W+ R + + Sbjct: 61 DDCMTIARPWSQGRTALDYTGNGRRLVLAFKHADRPDIAEPAARWVARAAQPL 113 >gi|126730067|ref|ZP_01745879.1| Competence protein F [Sagittula stellata E-37] gi|126709447|gb|EBA08501.1| Competence protein F [Sagittula stellata E-37] Length = 237 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 4/112 (3%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN----NKDNIDKDPL 67 + L +YP C ++ F LCG CW + FIT + + + Sbjct: 1 MQTLVQLVYPPRCLSCGGLVETDFGLCGACWRETRFITGLACDVCGAPLPGESGTVEHCD 60 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P R+ +Y D+ LV LK+ DR D+A A+WM RV + Sbjct: 61 DCLTLARPWVGGRAALVYADVGRRLVLALKHGDRQDIAAPAAEWMARVSRDM 112 >gi|148258762|ref|YP_001243347.1| putative competence protein F (COMF) [Bradyrhizobium sp. BTAi1] gi|146410935|gb|ABQ39441.1| putative competence protein F (COMF) [Bradyrhizobium sp. BTAi1] Length = 267 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 5/113 (4%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP---- 66 I P++C ++ +C CW K+ FI D P Sbjct: 27 IAKLALDIALPTLCISCREPVDGE-GVCAACWGKLSFIERPYCPKLGIPFVYDPGPELLS 85 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++++ + R+ Y +++ LV LKY DRTDLA +M +WM R ++ Sbjct: 86 MEAIAAPPAYAKARAAVRYDEVARTLVHQLKYQDRTDLAPIMGRWMARAGREL 138 >gi|319406072|emb|CBI79702.1| competence protein ComF [Bartonella sp. AR 15-3] Length = 225 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 4/94 (4%) Query: 30 IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPLTQIRSVTLY 85 + + +C CW + FIT + D +++Q P + +RS ++ Sbjct: 1 MTSAYGTVCSDCWKDLQFITKPYCPVMGTPFAYDIGEKFLSGEAIQNPPPFSFLRSAVVH 60 Query: 86 CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ L LKY DR +LA MA WM +I Sbjct: 61 KGLARTLATQLKYGDRLELASFMANWMMLAGREI 94 >gi|240136967|ref|YP_002961436.1| putative phosphoribosyltransferase [Methylobacterium extorquens AM1] gi|240006933|gb|ACS38159.1| putative phosphoribosyltransferase [Methylobacterium extorquens AM1] Length = 255 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 5/124 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 +PA+ ++ I L IYP C LC CWS + I Sbjct: 6 LPALSGGIRRIASTLIGLIYPPTCVSCGAATGQPHALCATCWSGLRLIERPYCERLGTPF 65 Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 +D + ++ + + R+V +Y + LV LKY+DR DLA MA+ M Sbjct: 66 ALDLGVGRLLSPGAIAEPPAFGRARAVAVYDGTARDLVHRLKYNDRLDLARTMARMMASA 125 Query: 116 LEKI 119 ++ Sbjct: 126 GREL 129 >gi|299132843|ref|ZP_07026038.1| phosphoribosyltransferase [Afipia sp. 1NLS2] gi|298592980|gb|EFI53180.1| phosphoribosyltransferase [Afipia sp. 1NLS2] Length = 266 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 5/115 (4%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP-- 66 + + P++C ++ LC CW+K+ FI D P Sbjct: 24 RRVARLALDIALPTLCISCREPVSGE-GLCPACWAKLSFIAPPYCARLGIPFVYDPGPGL 82 Query: 67 --LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++++ + R+ Y D++ LV LKY DRTDLA M +WM R ++ Sbjct: 83 LSMEAIAAPPAYHRARAAVRYDDVAGTLVHALKYQDRTDLAPAMGRWMARAGAEL 137 >gi|27375320|ref|NP_766849.1| competence protein F [Bradyrhizobium japonicum USDA 110] gi|27348456|dbj|BAC45474.1| competence protein F [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%) Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSMQK 72 P++C ++ +C CW+++ FI D P +++ Sbjct: 35 DIALPTLCVSCREPVDGE-GVCAACWARLSFIERPYCPRLGIPFVYDPGPDMLSMEAIAS 93 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + R+ Y D++ LV LKY DRTDLA M +WM R ++ Sbjct: 94 PPAYQRARAAVRYDDVARTLVHALKYQDRTDLAPAMGRWMARAGGEL 140 >gi|163849759|ref|YP_001637802.1| competence protein F [Methylobacterium extorquens PA1] gi|163661364|gb|ABY28731.1| competence protein F [Methylobacterium extorquens PA1] Length = 255 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 5/124 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 +PA+ ++ L IYP C LC CWS + I Sbjct: 6 LPALSGGIRRFASTLIGLIYPPTCVSCGAATGQPHALCAACWSGLRLIERPYCERLGTPF 65 Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 +D + ++ + + R+V +Y + LV LKY+DR DLA MA+ M Sbjct: 66 ALDLGVGRLLSPGAIAEPPAFCRARAVAVYEGTARDLVHRLKYNDRLDLARTMARMMASA 125 Query: 116 LEKI 119 ++ Sbjct: 126 GREL 129 >gi|39933674|ref|NP_945950.1| phosphoribosyltransferase [Rhodopseudomonas palustris CGA009] gi|192289031|ref|YP_001989636.1| phosphoribosyltransferase [Rhodopseudomonas palustris TIE-1] gi|39647520|emb|CAE26041.1| possible competence protein F (COMF) [Rhodopseudomonas palustris CGA009] gi|192282780|gb|ACE99160.1| phosphoribosyltransferase [Rhodopseudomonas palustris TIE-1] Length = 271 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 5/114 (4%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP--- 66 P++C + +C CWS++ FI D P Sbjct: 30 RATQAALDLALPTLCVACREPVAGE-GVCAQCWSQLSFIAPPYCEKLGIPFVYDPGPGML 88 Query: 67 -LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++++ ++ R+ Y +++ VLV LK+HDRTDLA M +WM R + + Sbjct: 89 SMQAIADPPAYSRARAAVRYDEVAKVLVHGLKFHDRTDLAPTMGRWMARAGQPL 142 >gi|92116101|ref|YP_575830.1| phosphoribosyltransferase [Nitrobacter hamburgensis X14] gi|91798995|gb|ABE61370.1| phosphoribosyltransferase [Nitrobacter hamburgensis X14] Length = 270 Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 5/123 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 + A V P++C + +C CW+K+ FI Sbjct: 20 LLACYGVVSHAARTALDVALPTLCVACREPVAG-VGVCADCWTKLSFIERPYCPRLGTPF 78 Query: 61 NIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 D ++++ + R+ Y D++ VLV LKY DRTDLA M +WM R Sbjct: 79 VYDPGTNMLSMEAIANPPAYQRARAAVRYDDVAKVLVHALKYQDRTDLAPAMGRWMARAG 138 Query: 117 EKI 119 ++ Sbjct: 139 TEL 141 >gi|85713804|ref|ZP_01044794.1| phosphoribosyltransferase [Nitrobacter sp. Nb-311A] gi|85699708|gb|EAQ37575.1| phosphoribosyltransferase [Nitrobacter sp. Nb-311A] Length = 269 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 5/111 (4%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LK 68 P++C + +C CW+++ FI D ++ Sbjct: 31 RTALDIALPTLCVACREPVAGP-GVCADCWTQLSFIERPYCPRLGTPFVYDPGSEMLSME 89 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ + R+ Y D++ VLV LKY DRTDLA M +WM R ++ Sbjct: 90 AIANPPAYQRARAAVRYDDVAKVLVHALKYQDRTDLAPAMGRWMARAGSEL 140 >gi|218528400|ref|YP_002419216.1| competence protein F [Methylobacterium chloromethanicum CM4] gi|218520703|gb|ACK81288.1| competence protein F [Methylobacterium chloromethanicum CM4] Length = 255 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 5/122 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 +PA+ ++ I L IYP C LC CWS + I Sbjct: 6 LPALSGGIRRIASTLIGLIYPPTCVSCGAATGQPHALCAACWSGLRLIERPYCERLGTPF 65 Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 +D + ++ + + R+V LY + LV LKY+DR DLA MA+ M Sbjct: 66 ALDLGVGRLLSPGAIAEPPAFDRARAVALYEGTARDLVHRLKYNDRLDLARTMARMMASA 125 Query: 116 LE 117 Sbjct: 126 GR 127 >gi|75674583|ref|YP_317004.1| phosphoribosyltransferase [Nitrobacter winogradskyi Nb-255] gi|74419453|gb|ABA03652.1| phosphoribosyltransferase [Nitrobacter winogradskyi Nb-255] Length = 271 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 5/118 (4%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 +T+ P++C + +C CW+K+ FI D Sbjct: 26 ETMSYAARTALDIALPTLCVACREPVAG-VGVCADCWTKLSFIERPYCPRLGTPFVYDPG 84 Query: 66 P----LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++++ + R+ Y D++ VLV LKY DRTDLA +M +WM R + Sbjct: 85 SEMLSMEAIANPPAYQRARAAVRYDDVAKVLVHALKYQDRTDLAPVMGRWMARAGSGL 142 >gi|84514889|ref|ZP_01002252.1| competence protein F, putative [Loktanella vestfoldensis SKA53] gi|84511048|gb|EAQ07502.1| competence protein F, putative [Loktanella vestfoldensis SKA53] Length = 241 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + + IYP+ C LCG CW + FI T L + D Sbjct: 4 MQSVIRAIYPAQCVACETQTQAENGLCGTCWRETQFIDGTICDTCGAPLPGDSDGHRLQC 63 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 M P + R+ +Y + LV LK+ DRTDL WM R+ + Sbjct: 64 DDCMAIARPWDRGRAALVYNGIGRKLVLGLKHGDRTDLVEPAGLWMARLARAL 116 >gi|83942062|ref|ZP_00954524.1| Competence protein F [Sulfitobacter sp. EE-36] gi|83847882|gb|EAP85757.1| Competence protein F [Sulfitobacter sp. EE-36] Length = 242 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 40/116 (34%), Gaps = 5/116 (4%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNI 62 ++ + IYP C + LCG CW FI L + Sbjct: 1 MRDQLQTAVALIYPPSCLACGAWVTAHGGLCGPCWRDTGFIEGVVCETCGIPLLGDLSET 60 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D + P R+ LY D LV LK+ DR D+A WM RV+ Sbjct: 61 DVRCDACLAAPPPWEHGRAALLYRDTGRRLVLALKHGDRQDIAKPAGHWMARVIAP 116 >gi|323139478|ref|ZP_08074526.1| phosphoribosyltransferase [Methylocystis sp. ATCC 49242] gi|322395280|gb|EFX97833.1| phosphoribosyltransferase [Methylocystis sp. ATCC 49242] Length = 254 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 6/125 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 + + + L +YP C + + + LC CWS I FI Sbjct: 5 LGGLPDLARRAGAALLDLVYPPSCLVCRKAVAQNGALCAACWSDIAFIERPFCERLGTPF 64 Query: 61 NIDKD-----PLKSMQKDLPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 D D ++ + R+V Y D + L LKY+DR +LA M +WM R Sbjct: 65 ERDLDQPGLISPEAAANPPVFHRARAVARYDSDKARSLAHRLKYYDRLELAGPMGRWMAR 124 Query: 115 VLEKI 119 I Sbjct: 125 AGADI 129 >gi|221640691|ref|YP_002526953.1| Competence protein F [Rhodobacter sphaeroides KD131] gi|221161472|gb|ACM02452.1| Competence protein F [Rhodobacter sphaeroides KD131] Length = 240 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 39/113 (34%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + ++P C + + F LCG CW FI L Sbjct: 3 LQAALRLLFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDLCGAPLPGEDPGHPVRC 62 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P + R+ LY D L LK+ DR DLA +A W+ R I Sbjct: 63 DDCLSSARPWDRGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115 >gi|188579651|ref|YP_001923096.1| competence protein F [Methylobacterium populi BJ001] gi|179343149|gb|ACB78561.1| competence protein F [Methylobacterium populi BJ001] Length = 255 Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 5/124 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 +PA+ V+ + +YP C LC CW + I Sbjct: 6 LPAVRDGVRRLASAAIGLVYPPTCVACGGATGQPHALCAACWRGLRLIERPYCERLGTPF 65 Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 +D ++ + + R+V +Y + LV LKY DR DLA M + M Sbjct: 66 ALDLGIGSLLSPGAIAEPPVFGRARAVAIYDGTARDLVHRLKYGDRLDLARTMGRMMASA 125 Query: 116 LEKI 119 ++ Sbjct: 126 GREV 129 >gi|220921700|ref|YP_002497001.1| phosphoribosyltransferase [Methylobacterium nodulans ORS 2060] gi|219946306|gb|ACL56698.1| phosphoribosyltransferase [Methylobacterium nodulans ORS 2060] Length = 264 Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 43/124 (34%), Gaps = 5/124 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 MP+ + V S + L IYP C LC CW + FI Sbjct: 1 MPSFHRPVLSALEALVGLIYPPSCIACGAATGTPHALCPACWRGMRFIEPPYCERLGTPF 60 Query: 61 NIDKD-----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 +D +M + R+ Y D + LV LKY DR DLA + M R Sbjct: 61 AVDLGVPGLLSPAAMADPPVFARARAAVRYDDAARRLVHRLKYEDRLDLAAALGGMMARA 120 Query: 116 LEKI 119 + Sbjct: 121 GSGL 124 >gi|126463616|ref|YP_001044730.1| competence protein F [Rhodobacter sphaeroides ATCC 17029] gi|126105280|gb|ABN77958.1| competence protein F [Rhodobacter sphaeroides ATCC 17029] Length = 240 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 38/113 (33%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + ++P C + + F LCG CW FI L Sbjct: 3 LQAALRLLFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDRCGAPLPGEDPGHPVRC 62 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P R+ LY D L LK+ DR DLA +A W+ R I Sbjct: 63 DDCLSSARPWDHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115 >gi|146278666|ref|YP_001168825.1| amidophosphoribosyltransferase-like protein [Rhodobacter sphaeroides ATCC 17025] gi|145556907|gb|ABP71520.1| amidophosphoribosyltransferase-like protein [Rhodobacter sphaeroides ATCC 17025] Length = 240 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDP 66 + ++P C + ++ F LCG CW F+ L Sbjct: 3 LQAALRLLFPPQCLLCETLVTTDFGLCGPCWRATPFVAGLVCDLCGCPLPGEDPGHPVHC 62 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + P Q R+ LY D + LV LK+ DR DL A W+ V + Sbjct: 63 DECLTSARPWDQGRAAMLYRDNARKLVLALKHGDRLDLVRPAAGWILGVARPL 115 >gi|316932065|ref|YP_004107047.1| phosphoribosyltransferase [Rhodopseudomonas palustris DX-1] gi|315599779|gb|ADU42314.1| phosphoribosyltransferase [Rhodopseudomonas palustris DX-1] Length = 271 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 5/114 (4%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP--- 66 + P++C + LC CWS++ FI D P Sbjct: 30 RAAQAVLDLALPTLCVACREPVAGD-GLCARCWSQLSFIAPPYCEKLGIPFVYDPGPGML 88 Query: 67 -LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++++ ++ R+ Y +++ LV LK+HDRTDLA M +WM R + Sbjct: 89 SMQAIADPPAYSRARAAVRYDEIAKALVHGLKFHDRTDLAPTMGRWMARAGAPL 142 >gi|77464774|ref|YP_354278.1| competence protein F [Rhodobacter sphaeroides 2.4.1] gi|77389192|gb|ABA80377.1| Competence protein F [Rhodobacter sphaeroides 2.4.1] Length = 240 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 38/113 (33%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + ++P C + + F LCG CW FI L Sbjct: 3 LQAALRLLFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDLCGAPLPGEDPGHPVRC 62 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P R+ LY D L LK+ DR DLA +A W+ R I Sbjct: 63 DDCLSSARPWDHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115 >gi|254558820|ref|YP_003065915.1| phosphoribosyltransferase [Methylobacterium extorquens DM4] gi|254266098|emb|CAX21850.1| putative phosphoribosyltransferase [Methylobacterium extorquens DM4] Length = 255 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 5/122 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 +PA+ ++ I L IYP C LC CWS + I Sbjct: 6 LPALSGGIRRIASTLIGLIYPPTCVSCGAATGRPHALCAACWSGLRLIERPYCERLGTPF 65 Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 +D + ++ + + R+V +Y + LV LKY+DR DLA MA+ M Sbjct: 66 ALDLGVGRLLSPGAITEPPAFGRARAVAVYEGTARDLVHRLKYNDRLDLARTMARMMASA 125 Query: 116 LE 117 Sbjct: 126 GR 127 >gi|332559669|ref|ZP_08413991.1| competence protein F [Rhodobacter sphaeroides WS8N] gi|332277381|gb|EGJ22696.1| competence protein F [Rhodobacter sphaeroides WS8N] Length = 240 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 39/113 (34%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + ++P C + + F LCG CW FI L Sbjct: 3 LQAALRLLFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDLCGAPLPGEDPGHPVRC 62 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P R+ LY D L LK+ DR DLA +A W+FR I Sbjct: 63 DDCLSSARPWAHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWIFRAARPI 115 >gi|85706922|ref|ZP_01038012.1| competence protein F, putative [Roseovarius sp. 217] gi|85668533|gb|EAQ23404.1| competence protein F, putative [Roseovarius sp. 217] Length = 232 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%) Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDPLKSMQK 72 IYP C + ++ F LCG CW FI+ L + + ++ Sbjct: 1 MIYPPRCTLCGAVVESDFGLCGPCWRDTPFISGLVCDTCGVPLPGEVHAGAEHCDECLRI 60 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P ++ R+ Y + LV +LK+ DR D+ A+WM R + + Sbjct: 61 ARPWSEGRAAMRYHENGRKLVLMLKHGDRHDVVRPAAKWMARAAQPL 107 >gi|149204345|ref|ZP_01881312.1| competence protein F, putative [Roseovarius sp. TM1035] gi|149142230|gb|EDM30277.1| competence protein F, putative [Roseovarius sp. TM1035] Length = 232 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 5/107 (4%) Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDPLKSMQK 72 +YP+ C + +++ F LCG CW FI+ L ++ Sbjct: 1 MVYPARCTLCGAVVDSDFGLCGPCWRDTPFISGLVCETCGVPLPGEGHAEAAHCDDCLRM 60 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P +Q R+ Y + L+ +LK+ DR D+ A+WM R + + Sbjct: 61 ARPWSQGRAAIRYHENGRKLILMLKHGDRHDVVRPAAKWMARAAQPL 107 >gi|209883247|ref|YP_002287104.1| phosphoribosyltransferase [Oligotropha carboxidovorans OM5] gi|209871443|gb|ACI91239.1| phosphoribosyltransferase [Oligotropha carboxidovorans OM5] Length = 278 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 5/111 (4%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LK 68 P+ C + LC CWSK+ FI D P ++ Sbjct: 40 RLALDVALPTQCLACREPVAGE-GLCPACWSKLSFIAPPYCARLGIPFVYDPGPGVLSME 98 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ + R+ Y +++ LV LKY DRTDLA M +WM R ++ Sbjct: 99 AIAAPPAYHRARAAVRYDEVAKTLVHALKYEDRTDLAPTMGRWMTRAGTEL 149 >gi|84500737|ref|ZP_00998986.1| competence protein F, putative [Oceanicola batsensis HTCC2597] gi|84391690|gb|EAQ04022.1| competence protein F, putative [Oceanicola batsensis HTCC2597] Length = 244 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 5/118 (4%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDN 61 + S++ +YP C ++ LCG CW FI A+ L + Sbjct: 2 RLASVLQTALRLVYPPTCLTCDALVEADHGLCGTCWGATPFIGASVCGLCGAPLPGDHVA 61 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + P R+ +Y D + LV LK+ DR D+A + WM + Sbjct: 62 AGDLCDDCLTTERPWDAGRAALVYRDNARRLVLGLKHGDRMDIARPASLWMAGAAGDM 119 >gi|254436580|ref|ZP_05050074.1| hypothetical protein OA307_1450 [Octadecabacter antarcticus 307] gi|198252026|gb|EDY76340.1| hypothetical protein OA307_1450 [Octadecabacter antarcticus 307] Length = 239 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 6/114 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN------NKDNIDKD 65 + L +YP C + + F LCG CW++ FI + Sbjct: 1 MQSLIQILYPPQCVMCEARTEVDFALCGRCWAETPFIDGLCCDECGSPLPGQGEPEFGIL 60 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 M P ++ R+ +Y D + LV LK+ DRTDLA W+ R + Sbjct: 61 CDDCMVIARPWSKGRAAMIYKDKARRLVLSLKHGDRTDLARAAGPWLARAAGPL 114 >gi|159046040|ref|YP_001534834.1| competence protein F [Dinoroseobacter shibae DFL 12] gi|157913800|gb|ABV95233.1| competence protein F [Dinoroseobacter shibae DFL 12] Length = 258 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----P 66 + +YP C + F LCG C + FI + Sbjct: 6 LQTALRTVYPPSCITCRAPVASDFGLCGECLRQTPFIAGGICNTCGVPVAGLSETETDIC 65 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P ++ R+V Y DM LV LK+ DRTDLA W+ R + Sbjct: 66 EDCLNIPRPWSRGRAVMTYQDMGRTLVLQLKHSDRTDLARPAGAWLARAARPL 118 >gi|254453222|ref|ZP_05066659.1| competence protein F [Octadecabacter antarcticus 238] gi|198267628|gb|EDY91898.1| competence protein F [Octadecabacter antarcticus 238] Length = 239 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------ 65 + L YPS C + + F LCG CW++ FI + + Sbjct: 1 MQSLIKIFYPSQCVMCEARTEVDFALCGPCWAETPFIDGLCCDGCGSPLPGQGEPEAGIL 60 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 M P ++ R+ +Y + + LV LK+ DRTDL W+ R + + Sbjct: 61 CDDCMVVARPWSKGRAAMIYKEKARRLVLSLKHGDRTDLTRAAGPWLARAAKPL 114 >gi|89052786|ref|YP_508237.1| competence protein F, putative [Jannaschia sp. CCS1] gi|88862335|gb|ABD53212.1| competence protein F putative [Jannaschia sp. CCS1] Length = 242 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 7/115 (6%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN-------NKDNIDK 64 + + H ++P C S + F +CG CW FI L + Sbjct: 3 LQTMLHAVFPPECLNCSARVEDAFAICGSCWGDTPFILGAACDLCGTGLPGQTAAEGEAL 62 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + R+V Y + LV LK+ DRTD+A WM R + Sbjct: 63 ICGECQRVPRAWDHARAVFSYEGVGRKLVLALKHGDRTDIARAAGPWMARAAADL 117 >gi|163745080|ref|ZP_02152440.1| competence protein F, putative [Oceanibulbus indolifex HEL-45] gi|161381898|gb|EDQ06307.1| competence protein F, putative [Oceanibulbus indolifex HEL-45] Length = 220 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 5/95 (5%) Query: 30 IINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTL 84 +++ F LCG CW FI T L D + P TQ R+ + Sbjct: 1 MVDADFGLCGTCWRDTGFIGGTVCDACGVPLPGGGDLASPHCDACLVTPRPWTQGRAALI 60 Query: 85 YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Y DM LV LK+ DR ++A A+W+ + I Sbjct: 61 YRDMGRKLVLALKHGDRQEIARPAARWLVHAAQDI 95 >gi|158425919|ref|YP_001527211.1| competence protein F [Azorhizobium caulinodans ORS 571] gi|158332808|dbj|BAF90293.1| competence protein F [Azorhizobium caulinodans ORS 571] Length = 264 Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLK 68 L P C I+ LC CW + I + ++ Sbjct: 29 RVLLDLALPPTCIACKAIVGTPGTLCAACWRDLRLIERPYCERLGTPFPFEDGATRLSVE 88 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ + R+ TL+ +S LV LKY DR DLA+ MA+ M R + Sbjct: 89 AVTDPPAFDRARAATLFGPVSQDLVHGLKYADRMDLALPMARLMARAGADL 139 >gi|315122266|ref|YP_004062755.1| competence protein F, putative [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495668|gb|ADR52267.1| competence protein F, putative [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 214 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 55/90 (61%), Positives = 73/90 (81%) Query: 30 IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89 +I+ RFCLC CWSKI+FI++ L+N + I++ PL+ +++DL L IRSV +YCD+S Sbjct: 1 MIDRRFCLCAFCWSKINFISSATQNLENIDNIINEKPLELLRQDLRLIPIRSVVVYCDIS 60 Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 CVLVRLLKYHDRTDLAIMMAQWMFRV +++ Sbjct: 61 CVLVRLLKYHDRTDLAIMMAQWMFRVGKEL 90 >gi|294675754|ref|YP_003576369.1| competence protein F [Rhodobacter capsulatus SB 1003] gi|294474574|gb|ADE83962.1| competence protein F [Rhodobacter capsulatus SB 1003] Length = 245 Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 4/120 (3%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN----NK 59 + +++ + H ++P C + LC CW ++ F+ T + Sbjct: 1 MPDALRAALRVALHTVFPPRCICCGAAVGSDDGLCPACWREMSFLAGTVCDCCGTPLPGE 60 Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 D + + P + R+ LY LV LK+ DR DL +A + R ++ I Sbjct: 61 DAGPVLCDDCLTRPRPWGRGRAAFLYDGTGRKLVLQLKHADRLDLVPPLAAMLARAVQPI 120 >gi|217979097|ref|YP_002363244.1| phosphoribosyltransferase [Methylocella silvestris BL2] gi|217504473|gb|ACK51882.1| phosphoribosyltransferase [Methylocella silvestris BL2] Length = 268 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 6/118 (5%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 ++ ++P C + LC CWSK+ FI +D Sbjct: 29 LRLAGRAAADLVFPPSCLSCRQATAAHGSLCAACWSKVRFIERPFCERLGVPFAVDLGDE 88 Query: 66 ---PLKSMQKDLPLTQIRSVTLY-CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ + R+V + L+ LKY DR +LA + WM R I Sbjct: 89 GLLSPDAVANPPVYERARAVAQFEDGPVRHLIHRLKYGDRMELAKPLGAWMARAGADI 146 >gi|115522182|ref|YP_779093.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisA53] gi|115516129|gb|ABJ04113.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisA53] Length = 273 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 5/102 (4%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSM 70 P++C + LC CWS++ FI D P ++++ Sbjct: 37 ALDLALPTLCAACREPVAGD-GLCASCWSQLSFIEPPFCERLGIPFVYDPGPGILSMQAI 95 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + R+ Y +++ LV LK+HDR DLA +M +WM Sbjct: 96 ADPPAYQRARAAVRYDEVARTLVHALKFHDRVDLAPVMGRWM 137 >gi|170749082|ref|YP_001755342.1| competence protein F [Methylobacterium radiotolerans JCM 2831] gi|170655604|gb|ACB24659.1| competence protein F [Methylobacterium radiotolerans JCM 2831] Length = 253 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 5/124 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 + A+ ++ + + +YP C C CWS + I Sbjct: 4 LQAVATALRGLPRGVVSLVYPPTCAGCGSATADPGAFCPSCWSSLRLIEEPVCQRYGTPF 63 Query: 61 NIDKD-----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 +D +++ + + R+V LY ++ +V LKY DR DLA +MA+ M Sbjct: 64 ALDLGVGPLVSPRAIAEPPVFGRARAVALYDAVARRIVHRLKYEDRLDLAGVMARMMAAS 123 Query: 116 LEKI 119 + Sbjct: 124 GRTL 127 >gi|118588528|ref|ZP_01545937.1| phosphoribosyltransferase [Stappia aggregata IAM 12614] gi|118439234|gb|EAV45866.1| phosphoribosyltransferase [Stappia aggregata IAM 12614] Length = 253 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 4/111 (3%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLK 68 + P C ++ + LC CWS++ F+ D + Sbjct: 12 RFALDFVLPQRCFSCDARVSEQTGLCAQCWSQVPFLEKPWCERLGIPFAYDVGEGAWSPQ 71 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ ++R+V Y + +V LK+ R DLA MA+WM R ++ Sbjct: 72 AITAPPVFNRLRAVAFYDGPARQMVHALKFSGRRDLARPMARWMVRSGSEL 122 >gi|163792772|ref|ZP_02186749.1| Phosphoribosyltransferase [alpha proteobacterium BAL199] gi|159182477|gb|EDP66986.1| Phosphoribosyltransferase [alpha proteobacterium BAL199] Length = 248 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 4/123 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 + + ++ + + + P C ++ LC CWS++ FI + N Sbjct: 4 LDSATSVLRGVTTAVLDALLPPRCAACGEPVDRPRTLCLACWSRLSFIARPLCAICGNPF 63 Query: 61 NIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 + P + RS Y + S LV K+ DR L ++A WM Sbjct: 64 ETAPPGEPVCGGCLANPPPWRRARSALAYDESSRPLVLGFKHGDRLHLTSLLAAWMRLAG 123 Query: 117 EKI 119 ++ Sbjct: 124 AEL 126 >gi|144900147|emb|CAM77011.1| competence protein F [Magnetospirillum gryphiswaldense MSR-1] Length = 244 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 5/112 (4%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----PL 67 +L + P +C I+ LC CWS + F+ A + + D Sbjct: 9 RKLLDAVLPPLCLCCGAIVAEPGALCAQCWSGLRFVAAPHCPVCGQPFDTDPGGADMVCG 68 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + + P + R+V Y D S L+ K+ DR + A +W+ R ++ Sbjct: 69 RCLAEPPPWDRARAVFCYDDASKPLILRFKHADRLEGAPAFGRWLARAGAEL 120 >gi|89067454|ref|ZP_01154967.1| Competence protein F [Oceanicola granulosus HTCC2516] gi|89047023|gb|EAR53077.1| Competence protein F [Oceanicola granulosus HTCC2516] Length = 237 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 5/113 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + L IYP+ C + + LC CW++ F+ L + + Sbjct: 1 MQSLLRAIYPAQCLLCEELTVEEQGLCPACWARTPFLFGLVCDLCGTALPGVDEGVPVHC 60 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ P + R+ Y + + LV LK DRT+LA A+W+ R + Sbjct: 61 DDCLRTARPWDRGRAALRYDEAARELVLRLKRADRTELARPAARWLGRAAAPL 113 >gi|146337714|ref|YP_001202762.1| putative competence protein F (COMF) [Bradyrhizobium sp. ORS278] gi|146190520|emb|CAL74519.1| putative competence protein F (COMF) [Bradyrhizobium sp. ORS278] Length = 267 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 9/127 (7%) Query: 1 MPAIIQTVKSIIIEL----FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK 56 + + +S L P++C ++ +C CW K+ FI Sbjct: 13 LRVMASAARSACGHLAKLTLDIALPTLCIACREPVDGE-GVCAACWGKLSFIERPYCPKL 71 Query: 57 NNKDNIDKDP----LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 D P ++++ + R+ Y D++ LV LKY DRTDLA +M +WM Sbjct: 72 GIPFVYDPGPELLSMEAIAAPPAYARARAAVRYDDVASTLVHALKYQDRTDLAPIMGRWM 131 Query: 113 FRVLEKI 119 R ++ Sbjct: 132 TRAGHEL 138 >gi|182678125|ref|YP_001832271.1| phosphoribosyltransferase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634008|gb|ACB94782.1| phosphoribosyltransferase [Beijerinckia indica subsp. indica ATCC 9039] Length = 264 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL-----KS 69 I+P +C + I LC CW K+ FI ++D ++ Sbjct: 32 AADFIFPPLCLCCRKAIASTGALCPECWDKVRFIERPFCERLGTPFSMDLGQDGLLSPEA 91 Query: 70 MQKDLPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + R+V + LV LKY DR ++A + WM R + Sbjct: 92 VANPPVYGRARAVAQFDEGPVRHLVHRLKYGDRLEVARPLGLWMARAGADL 142 >gi|307942657|ref|ZP_07658005.1| phosphoribosyltransferase [Roseibium sp. TrichSKD4] gi|307774296|gb|EFO33509.1| phosphoribosyltransferase [Roseibium sp. TrichSKD4] Length = 209 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSM 70 L + P C I LC CW KI FI + + P +++ Sbjct: 25 LLDSLLPPRCATCPEEIARGLGLCSSCWQKIRFIEVPVCHRFGTPFSHEIGPNALSPRAI 84 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + R+ LY + +V LK+ R +L+ +M +WM R ++ Sbjct: 85 ASPPLFERARAACLYDGPARDMVHALKFSRRRELSEVMGRWMVRAGREL 133 >gi|154247019|ref|YP_001417977.1| phosphoribosyltransferase [Xanthobacter autotrophicus Py2] gi|154161104|gb|ABS68320.1| phosphoribosyltransferase [Xanthobacter autotrophicus Py2] Length = 255 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 4/117 (3%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65 +++ L P C I + LCG CW K+ FI+ D Sbjct: 14 ALRAFGSGLLGLALPPTCIACGGITGMAGGLCGPCWGKLAFISRPFCERTGAPFTHDPGG 73 Query: 66 ---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++ + R+ + D++ LV LKY DR D+A +A+ M + + Sbjct: 74 ARISAQALDDPPAFDRARAAVTFNDVARDLVHKLKYADRLDVAAPLARLMAQAGADV 130 >gi|296444589|ref|ZP_06886553.1| phosphoribosyltransferase [Methylosinus trichosporium OB3b] gi|296257857|gb|EFH04920.1| phosphoribosyltransferase [Methylosinus trichosporium OB3b] Length = 262 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 5/120 (4%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 + ++ L +YP +C + + LC CW + FI + D Sbjct: 18 ARLLRGFGARLLDLVYPPVCLVCREAVATHGALCPACWGGMGFIERPYCERLGLPFDRDL 77 Query: 65 D----PLKSMQKDLPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 L + + R+V Y D + L LKY+DR +LA + +WM R ++ Sbjct: 78 GAGAISLAASADPPAFARARAVARYDSDKARSLAHRLKYYDRLELAEPLGRWMARAGAEL 137 >gi|119385312|ref|YP_916368.1| competence protein F [Paracoccus denitrificans PD1222] gi|119375079|gb|ABL70672.1| competence protein F [Paracoccus denitrificans PD1222] Length = 245 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 38/120 (31%), Gaps = 12/120 (10%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------ 65 + +YP C + LC CW + FIT T D Sbjct: 1 MKGALRLVYPPQCLCCGAPVVEESGLCPACWREAEFITGTCCARCGAPLPDDGYGDGGDE 60 Query: 66 ------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P Q R+ +Y L +LK+ DR DLA + W+ R + Sbjct: 61 AAGLLVCDDCIAMPRPWQQARAALVYRGAGRRLALMLKHGDRLDLAPALGGWVARAALPL 120 >gi|310817136|ref|YP_003965100.1| Competence protein F [Ketogulonicigenium vulgare Y25] gi|308755871|gb|ADO43800.1| Competence protein F [Ketogulonicigenium vulgare Y25] Length = 244 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 3/115 (2%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK--NNKDNIDKD 65 V ++ + H IYP C + + LCG CW+ FI L D Sbjct: 7 VGRLMDRIAHVIYPPGCMGCAAPVVGENALCGPCWAAAGFIAGASCTLCAVPLPGAGDAV 66 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW-MFRVLEKI 119 + P + R++ +Y ++ L+ LK+ DRTDLA ++ W M R + + Sbjct: 67 CDACLYHAPPWDRGRALMVYEGLARQLILQLKHADRTDLAPALSSWLMRRAGDWL 121 >gi|209965933|ref|YP_002298848.1| competence protein F [Rhodospirillum centenum SW] gi|209959399|gb|ACJ00036.1| competence protein F [Rhodospirillum centenum SW] Length = 263 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 4/119 (3%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 ++ ++ + + P C + LC CWS++ FI + Sbjct: 17 VRVLRDWRGRALNLLLPPRCLACGTDVEAPGTLCPACWSRVTFIGPPLCACCGRPFDYAA 76 Query: 65 D----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + RS +Y + S LV K+ DRTD+A W+ R ++ Sbjct: 77 PDRSLCGACIAAPPRFDRCRSALVYDEGSRGLVLAFKHADRTDVAEGFGAWLARAGAEL 135 >gi|46203599|ref|ZP_00209035.1| COG1040: Predicted amidophosphoribosyltransferases [Magnetospirillum magnetotacticum MS-1] Length = 132 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 5/106 (4%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 + Q ++S+ IYP C LC CWS I + Sbjct: 21 GLAQGLRSVASVAIGLIYPPTCVSCGAATGEPHALCAQCWSGFRLIERPYCKRLGTPFAL 80 Query: 63 DKD-----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 D ++ + + R+V +Y + LV LKY+DR D Sbjct: 81 DLGIGPLLSPAAIAEPPVFGRARAVAVYDGTARDLVHRLKYNDRLD 126 >gi|90422044|ref|YP_530414.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB18] gi|90104058|gb|ABD86095.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB18] Length = 269 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 Q + P++C ++ +C CWS++ FI D Sbjct: 24 QALGHGARLALDIALPTLCVACREPVSGH-GVCAACWSQLSFIAPPYCERLGIPFVYDPG 82 Query: 66 P----LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P ++++ + R+ Y +++ LV LK+HDR DLA M +WM + + Sbjct: 83 PGILSMQAIADPPAYARARAAVRYDEVARTLVHALKFHDRVDLAPTMGRWMAQAGAPL 140 >gi|114762234|ref|ZP_01441702.1| Competence protein F [Pelagibaca bermudensis HTCC2601] gi|114545258|gb|EAU48261.1| Competence protein F [Roseovarius sp. HTCC2601] Length = 241 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 4/101 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK----DNID 63 ++ + L +YP C I ++ F LC CW F++ + Sbjct: 1 MRGTMQTLLRMLYPPRCLICGGLVESDFGLCAACWRDTPFLSGLACATCGVPLPGVSDRA 60 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 + + P + + Y D LV +LK+ DR D+ Sbjct: 61 EHCDACLAAPPPWREGTAALAYRDNGRTLVLMLKHGDRHDI 101 >gi|328542087|ref|YP_004302196.1| phosphoribosyl transferase domain protein [polymorphum gilvum SL003B-26A1] gi|326411836|gb|ADZ68899.1| Phosphoribosyl transferase domain protein [Polymorphum gilvum SL003B-26A1] Length = 257 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 4/123 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 + + + P C R I LC CW+ + ++ A Sbjct: 7 LNGFTRLAAQACGAALDLLLPPRCLACERTIAEPGGLCAVCWADMPWLEAPRCARLGTPF 66 Query: 61 NIDKDPLK----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 + D ++ + + R+ LY + LV LK+ R + A M +WM Sbjct: 67 SHDLGAGALSPRAIAEPPLFDRARAAALYKGPARDLVLTLKFGGRRETAGAMGRWMAFAG 126 Query: 117 EKI 119 ++ Sbjct: 127 HEL 129 >gi|46201247|ref|ZP_00208026.1| COG1040: Predicted amidophosphoribosyltransferases [Magnetospirillum magnetotacticum MS-1] Length = 344 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 4/112 (3%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65 I + + P +C + LC CWS + F+ D Sbjct: 105 VRIARLVIDALLPPLCLSCQAEVAEPGSLCPACWSGMVFLGEPSCACCGLPFEFDPGDGV 164 Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 + + + R+V Y D S LV K+ DR + A+WM R Sbjct: 165 ICGECARVKPRYARARAVFRYDDSSKALVLRFKHGDRLEGVGAFARWMARAG 216 >gi|83953111|ref|ZP_00961833.1| Competence protein F [Sulfitobacter sp. NAS-14.1] gi|83842079|gb|EAP81247.1| Competence protein F [Sulfitobacter sp. NAS-14.1] Length = 219 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 32/91 (35%), Gaps = 5/91 (5%) Query: 33 LRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCD 87 LCG CW FI L + D + P R+ LY D Sbjct: 3 AHGGLCGPCWRDTGFIEGVVCETCGIPLLGDLSETDVRCDACLAAPPPWDHGRAALLYRD 62 Query: 88 MSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 LV LK+ DR D+A WM RV+ Sbjct: 63 TGRRLVLALKHGDRQDIAKPAGHWMARVIAP 93 >gi|91974589|ref|YP_567248.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB5] gi|91681045|gb|ABE37347.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB5] Length = 272 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 5/109 (4%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSM 70 P++C + LC CWS++ FI D P ++++ Sbjct: 36 ALDVALPTLCVACREPVAGD-GLCAPCWSQLSFIAPPYCEKLGIPFVYDPGPGLLSMQAI 94 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + R+ Y +++ LV LK+HDR DLA M +WM + + Sbjct: 95 ADPPAYARARAAVRYDEVAKTLVHALKFHDRVDLAPTMGRWMAHAGQPL 143 >gi|288956999|ref|YP_003447340.1| hypothetical protein AZL_001580 [Azospirillum sp. B510] gi|288909307|dbj|BAI70796.1| hypothetical protein AZL_001580 [Azospirillum sp. B510] Length = 255 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 4/103 (3%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPL 76 P C ++ + LC CW + FI + + P Sbjct: 31 PPRCLGCGEAVDRQGGLCAACWVTLTFIAPPLCARCGLPFEYEAQEGALCGACLAAPPPF 90 Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + R+V Y D S LV K+ DR A W+ R +++ Sbjct: 91 ARARAVLAYDDGSRPLVLGFKHGDRIHAAGSYGLWLARAGKEL 133 >gi|170742923|ref|YP_001771578.1| phosphoribosyltransferase [Methylobacterium sp. 4-46] gi|168197197|gb|ACA19144.1| phosphoribosyltransferase [Methylobacterium sp. 4-46] Length = 279 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 31/95 (32%), Gaps = 5/95 (5%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----PLKS 69 L +YP C L LC CW + FI +D + Sbjct: 30 LLGLVYPPTCIACGAATGLPHALCPACWRGVRFIERPYCERLGTPFAVDLGVLGLLSPAA 89 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 M + R+ Y + LV LKY DR DL Sbjct: 90 MADPPVFGRARAALRYDATAKRLVHRLKYEDRLDL 124 >gi|154252188|ref|YP_001413012.1| phosphoribosyltransferase [Parvibaculum lavamentivorans DS-1] gi|154156138|gb|ABS63355.1| phosphoribosyltransferase [Parvibaculum lavamentivorans DS-1] Length = 258 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 4/119 (3%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 + K+ + + P +C ++ LCG CW+ + FI + + Sbjct: 11 AEAAKAGFSRVADIVLPPLCLGCGCGLDSHAALCGTCWAGVDFIDRPYCEVTGVPFPYEA 70 Query: 65 D----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ + R+V Y + S L+ KY DR + A A W+ R + Sbjct: 71 GLGAVSAAAIANPPSYARARAVMRYNEGSTRLIHRFKYSDRMEAAPAFALWLVRAGAAL 129 >gi|298292753|ref|YP_003694692.1| phosphoribosyltransferase [Starkeya novella DSM 506] gi|296929264|gb|ADH90073.1| phosphoribosyltransferase [Starkeya novella DSM 506] Length = 273 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 7/120 (5%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + + + P IC ++ CLC CW + FI D DP Sbjct: 24 AARGLGRRVIDFALPPICMTRRAAVDQPGCLCATCWRGMEFIERPYCDRLGTPLPYDADP 83 Query: 67 LK-------SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 L ++ + R+V + +++ LV LKY DR D+A MA+ M R I Sbjct: 84 LDGPAVSSAALADPPAYARARAVAAFGEVARDLVHALKYADRLDVAPPMARMMARAGADI 143 >gi|86747153|ref|YP_483649.1| phosphoribosyltransferase [Rhodopseudomonas palustris HaA2] gi|86570181|gb|ABD04738.1| Phosphoribosyltransferase [Rhodopseudomonas palustris HaA2] Length = 254 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSM 70 P++C + LC CWS++ FI D P ++++ Sbjct: 18 ALDVALPTLCVACREPVAGE-GLCPQCWSQLSFIAPPYCEKLGIPFVYDPGPGILSMQAI 76 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + R+ Y +++ LV LK+HDR DLA M +WM + Sbjct: 77 ADPPAYARARAAVRYDEVAKTLVHALKFHDRIDLAPTMGRWMAHAGAPL 125 >gi|296116147|ref|ZP_06834765.1| competence protein F [Gluconacetobacter hansenii ATCC 23769] gi|295977253|gb|EFG84013.1| competence protein F [Gluconacetobacter hansenii ATCC 23769] Length = 282 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 6/118 (5%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD------N 61 + + ++ + P C + +C C++ ++ I+A Sbjct: 31 LHKVAGQVLDLLLPPHCLSCGEEVEQAGHVCAACFTHLNLISAPACRKCGTPFTSEAAAG 90 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 D + P R+ +Y D S LV LKY DRT+ A +A++M + Sbjct: 91 DDLTCQNCLDAPPPWDSGRAALVYDDWSRRLVLGLKYGDRTENAAFLARYMHLSARDL 148 >gi|83592076|ref|YP_425828.1| phosphoribosyltransferase [Rhodospirillum rubrum ATCC 11170] gi|83574990|gb|ABC21541.1| Phosphoribosyltransferase [Rhodospirillum rubrum ATCC 11170] Length = 246 Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 6/117 (5%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65 + + LF + P C + LC C+S + IT + + Sbjct: 6 REMGRGLFDLLLPPRCLGCGTQVADPDALCPACFSGLAHITEPFCACCGLPFELGGEGEG 65 Query: 66 ---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + ++ R+V Y D S L+ K+ DR D A+WM R + Sbjct: 66 ERLCGACLGTPPLFSRARAVWRYDDASARLILGFKHADRLDSVPGFARWMARAGRAL 122 >gi|294012632|ref|YP_003546092.1| putative amidophosphoribosyltransferase [Sphingobium japonicum UT26S] gi|292675962|dbj|BAI97480.1| putative amidophosphoribosyltransferase [Sphingobium japonicum UT26S] Length = 251 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 4/111 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID---- 63 +K+ + L P CP I++ C CWS + F+ D Sbjct: 13 LKAALRPLADYALPPRCPGCGEIVDADHAFCLACWSGMRFLGEPCCARCGLPFEYDRGDG 72 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + + P R+V Y D++ + LKY R L+ ++A+ M R Sbjct: 73 AECGACLADPPPYDSARAVLAYGDVARAVALRLKYGRRIGLSRLIAKQMAR 123 >gi|307294581|ref|ZP_07574423.1| phosphoribosyltransferase [Sphingobium chlorophenolicum L-1] gi|306879055|gb|EFN10273.1| phosphoribosyltransferase [Sphingobium chlorophenolicum L-1] Length = 246 Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 4/118 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 M A+ +K+ + L P CP I++ C CWS + F+ A Sbjct: 1 MMALSPLLKTALRPLVDYALPPRCPGCGEIVDADDAFCLRCWSGMRFLGAPCCARCGAPF 60 Query: 61 NID----KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + D + + P ++V Y D++ + LKY R LA ++A+ M R Sbjct: 61 DYDRGAGAECGACLADPPPFDSAQAVLAYGDVARAVALRLKYGRRIGLARLIAKQMAR 118 >gi|94496926|ref|ZP_01303500.1| amidophosphoribosyltransferase [Sphingomonas sp. SKA58] gi|94423602|gb|EAT08629.1| amidophosphoribosyltransferase [Sphingomonas sp. SKA58] Length = 256 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 42/122 (34%), Gaps = 4/122 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 M A+ +KS + P CP I+ C CW + F+ Sbjct: 1 MMALAPLLKSALRPALDYALPPRCPGCGGIVGEDHAFCLDCWGGMEFLGDPCCARCGISF 60 Query: 61 ----NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 D + + R+V Y D++ + LKY RT LA ++A+ M R Sbjct: 61 PHDMGQDAECGACLADPPAWDSARAVLAYGDVARTVALRLKYGRRTGLARLIARQMLRHA 120 Query: 117 EK 118 Sbjct: 121 GP 122 >gi|254472326|ref|ZP_05085726.1| phosphoribosyltransferase [Pseudovibrio sp. JE062] gi|211958609|gb|EEA93809.1| phosphoribosyltransferase [Pseudovibrio sp. JE062] Length = 281 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 4/116 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP- 66 +K + + ++P CP+ S ++ LC CW K+ I+A + + P Sbjct: 35 LKRSLSFVLDALFPHCCPVCSELVQGEGGLCLSCWQKLDLISAPYCERLGVPLHYELGPN 94 Query: 67 ---LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ + R+ LY + LV+ K++ L+ +A M ++ Sbjct: 95 AWSAAALVNPPDYERARAAALYNGPAQELVKRFKFYGEIRLSKFLAGCMLNPGAEL 150 >gi|218659666|ref|ZP_03515596.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli IE4771] Length = 182 Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 27/53 (50%) Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +++ P ++RS + LV LKY DRTDLA MMA WM R + Sbjct: 3 SAEAIANPPPFDRVRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 55 >gi|258542216|ref|YP_003187649.1| competence protein F [Acetobacter pasteurianus IFO 3283-01] gi|256633294|dbj|BAH99269.1| competence protein F [Acetobacter pasteurianus IFO 3283-01] gi|256636353|dbj|BAI02322.1| competence protein F [Acetobacter pasteurianus IFO 3283-03] gi|256639406|dbj|BAI05368.1| competence protein F [Acetobacter pasteurianus IFO 3283-07] gi|256642462|dbj|BAI08417.1| competence protein F [Acetobacter pasteurianus IFO 3283-22] gi|256645517|dbj|BAI11465.1| competence protein F [Acetobacter pasteurianus IFO 3283-26] gi|256648570|dbj|BAI14511.1| competence protein F [Acetobacter pasteurianus IFO 3283-32] gi|256651623|dbj|BAI17557.1| competence protein F [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654614|dbj|BAI20541.1| competence protein F [Acetobacter pasteurianus IFO 3283-12] Length = 255 Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 6/117 (5%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD------NI 62 + + L +YP C + + C C+ ++ I+ Sbjct: 6 RKLGTALMDILYPPSCVLCGADVAQHGLTCAACFGRLQPISRPFCDACATPQPSQESLGR 65 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Q Q R+ +Y + L+ LKY DRT+ A +AQ M ++ + I Sbjct: 66 TGLCAACEQHHPAWQQARAAFVYTTAARDLILQLKYADRTENARFLAQRMAQIGQDI 122 >gi|260752407|ref|YP_003225300.1| phosphoribosyltransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551770|gb|ACV74716.1| phosphoribosyltransferase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 281 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 4/118 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK- 59 + ++ S + + P CP +I C CW +HF+ I Sbjct: 7 IKKCLEAAYSGLKTVIDYALPPRCPNCGAVILADHSFCVECWQSLHFLVEPACIQCGFPL 66 Query: 60 ---DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + + +Q ++ + Y ++S L+ KY +T LA MA+ M R Sbjct: 67 PRDQQYEPLCGRCLQHPPSFDRMNAAVAYDEISRQLILRCKYGKQTMLARDMAKLMLR 124 >gi|56552061|ref|YP_162900.1| amidophosphoribosyltransferase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543635|gb|AAV89789.1| amidophosphoribosyltransferase [Zymomonas mobilis subsp. mobilis ZM4] Length = 281 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 4/118 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK- 59 + ++ S + + P CP +I C CW +HF+ I Sbjct: 7 IKKCLEAAYSGLKTVIDYALPPRCPNCGAVILADHSFCVECWQSLHFLVEPACIQCGFPL 66 Query: 60 ---DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + + +Q ++ + Y ++S L+ KY +T LA MA+ M R Sbjct: 67 PRDQQYEPLCGRCLQHPPSFDRMNAAVAYDEISRQLILRCKYGKQTMLARDMAKLMMR 124 >gi|329113385|ref|ZP_08242166.1| Competence protein F [Acetobacter pomorum DM001] gi|326697210|gb|EGE48870.1| Competence protein F [Acetobacter pomorum DM001] Length = 255 Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 6/117 (5%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD------NI 62 + + L +YP C + + + C C+ ++ I+ Sbjct: 6 RKLGAVLLDILYPPSCILCGADVAQQGAACVSCFDRLQSISRPFCDACAAPQPSQESLGH 65 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Q R+ +Y + L+ LKY DRT+ A +AQ M ++ + I Sbjct: 66 TGLCAACEQHHPAWQHARAAFVYTAAARDLILQLKYADRTENARFLAQRMMQIGQDI 122 >gi|241762015|ref|ZP_04760099.1| amidophosphoribosyltransferase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373481|gb|EER63068.1| amidophosphoribosyltransferase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 281 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 4/118 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK- 59 + ++ S + + P CP +I C CW +HF+ I Sbjct: 7 IKKCLEAAYSGLKTVIDYALPPRCPNCGAVILADHSFCVECWQSLHFLVEPACIQCGFPL 66 Query: 60 ---DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + + +Q ++ + Y ++S L+ KY +T LA MA+ M R Sbjct: 67 PRDQQYEPLCGRCLQHPPSFDRMNAAVAYDEISKQLILRCKYGKQTMLARDMAKLMMR 124 >gi|300024693|ref|YP_003757304.1| phosphoribosyltransferase [Hyphomicrobium denitrificans ATCC 51888] gi|299526514|gb|ADJ24983.1| phosphoribosyltransferase [Hyphomicrobium denitrificans ATCC 51888] Length = 272 Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 4/120 (3%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 + + + P +C I LC CW +++F+ D Sbjct: 27 LFRAFGRAGRSALDVLLPPLCLACRTHITAHDALCPACWRRVNFVRPPLCDRLGLPLPYD 86 Query: 64 KD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ ++R+V + + L+ K+HD + +W+ ++ Sbjct: 87 TGGRMVSAAAVADPPDFDRVRAVASFDGVMRELIHAFKFHDTHHARHLFGRWLTEAGREL 146 >gi|197104234|ref|YP_002129611.1| predicted amidophosphoribosyltransferase [Phenylobacterium zucineum HLK1] gi|196477654|gb|ACG77182.1| predicted amidophosphoribosyltransferase [Phenylobacterium zucineum HLK1] Length = 259 Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 3/114 (2%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 V+++ ++P L L WS+IHF+ + D Sbjct: 18 VQALWRGALDLVFPPQALD-GGPRPLAGGLSHGAWSRIHFLDGPVCDGCGVPFDYDPGAR 76 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + R+ LY + S + LK+ DRTDLA + A+W+ R ++ Sbjct: 77 CPACQARPRAFDRARAACLYDETSREPILKLKHADRTDLAPLFARWLSRAAREL 130 >gi|330994801|ref|ZP_08318723.1| Protein gntX [Gluconacetobacter sp. SXCC-1] gi|329758062|gb|EGG74584.1| Protein gntX [Gluconacetobacter sp. SXCC-1] Length = 236 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK------DNIDKDPLKSMQ 71 ++P C + LC C +IH ITA D + + Sbjct: 1 MLFPPRCAGCGDDVAQTAHLCATCVGRIHLITAPFCHCCVMPFTSRAAGGPDLTCVACRE 60 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + R+ +Y D L+ LKY DRT+ A ++A++M + Sbjct: 61 NPPPWREARAAMVYDDTPRTLILPLKYADRTENAALLARYMAGAALGL 108 >gi|163759885|ref|ZP_02166969.1| phosphoribosyltransferase [Hoeflea phototrophica DFL-43] gi|162282843|gb|EDQ33130.1| phosphoribosyltransferase [Hoeflea phototrophica DFL-43] Length = 187 Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +++ P + R+ LY ++ L + LKY DR DLA MMA+WM R +I Sbjct: 3 SPEAIANPPPYAKARAAVLYDGVARKLAQGLKYSDRADLAKMMAKWMVRAGREI 56 >gi|254512068|ref|ZP_05124135.1| competence protein F [Rhodobacteraceae bacterium KLH11] gi|221535779|gb|EEE38767.1| competence protein F [Rhodobacteraceae bacterium KLH11] Length = 192 Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 27/66 (40%) Query: 54 ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + D + ++ P R+ LY + LV LK+ DR +LA A+WM Sbjct: 2 PVPGAPDGYRIECDDCLKAPRPWQDGRAALLYQGRAKALVLALKHGDRAELARPAARWMV 61 Query: 114 RVLEKI 119 + + Sbjct: 62 QAGRDL 67 >gi|190571652|ref|YP_001976010.1| competence protein f [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019054|ref|ZP_03334861.1| competence protein f [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357924|emb|CAQ55385.1| competence protein f [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995163|gb|EEB55804.1| competence protein f [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 234 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN--NKDNIDKDPLK 68 ++ + I+P++C RII+ + LC C KI+F+T + DNID K Sbjct: 5 LLKKATDLIFPNVCVSCERIIDKSYDLCSECNKKINFLTKHYCNVCGVVIPDNIDT-CGK 63 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P +RSV Y + S ++ K+ D + + A+WM++ + I Sbjct: 64 CISNPSPFKVLRSVFAYDEHSKNMIINFKFFDNLNYVKVYAKWMYKANKDI 114 >gi|162147687|ref|YP_001602148.1| phosphoribosyltransferase [Gluconacetobacter diazotrophicus PAl 5] gi|161786264|emb|CAP55846.1| putative phosphoribosyltransferase [Gluconacetobacter diazotrophicus PAl 5] Length = 276 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 11/107 (10%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK-----------DNIDKDPLKSMQK 72 CP+ + + LC C+ + FI+ + + Sbjct: 34 CPLCHQPVERAGLLCPDCFRHMRFISEPCCDACGEPFAGAGFAGSVLGGAGRICASCADR 93 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P R+ +Y + S L+ LKY DRT+LA ++ + M R+ + + Sbjct: 94 RPPWRAGRAALVYDEWSRALILRLKYADRTELAPLLGRHMARIGQGM 140 >gi|87200124|ref|YP_497381.1| phosphoribosyltransferase [Novosphingobium aromaticivorans DSM 12444] gi|87135805|gb|ABD26547.1| phosphoribosyltransferase [Novosphingobium aromaticivorans DSM 12444] Length = 269 Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 6/107 (5%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH------ILKNNKDNID 63 S + + ++P CP+ + LC CW K+ + + ++ + + Sbjct: 9 SALDPVLDFVFPPRCPLCGAPVAAHGGLCMACWDKLETPSGVACRSCQRPMGGSDDAHAE 68 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 M + I + TLY D S LV K+ R LA MMA+ Sbjct: 69 LVCAPCMADPPRHSGIAAATLYNDASRALVLAFKHGRRIGLAPMMAR 115 >gi|218513089|ref|ZP_03509929.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli 8C-3] Length = 96 Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 5/84 (5%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 Q ++ L +YP C + LC CW+ I FI + + D Sbjct: 14 RTQLLRPFSA-LADFLYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHD 72 Query: 64 KDPL----KSMQKDLPLTQIRSVT 83 +++ P ++RS Sbjct: 73 LGAGIVSAEAIANPPPFDRLRSAA 96 >gi|209542312|ref|YP_002274541.1| putative phosphoribosyltransferase [Gluconacetobacter diazotrophicus PAl 5] gi|209529989|gb|ACI49926.1| putative phosphoribosyltransferase [Gluconacetobacter diazotrophicus PAl 5] Length = 260 Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 11/107 (10%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK-----------DNIDKDPLKSMQK 72 CP+ + + LC C+ + FI+ + + Sbjct: 18 CPLCHQPVERAGLLCPDCFRHMRFISEPCCDACGEPFAGAGFAGSVLGGAGRICASCADR 77 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P R+ +Y + S L+ LKY DRT+LA ++ + M R+ + + Sbjct: 78 RPPWRAGRAALVYDEWSRALILRLKYADRTELAPLLGRHMARIGQGM 124 >gi|85374003|ref|YP_458065.1| amidophosphoribosyltransferase [Erythrobacter litoralis HTCC2594] gi|84787086|gb|ABC63268.1| amidophosphoribosyltransferase [Erythrobacter litoralis HTCC2594] Length = 263 Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 5/108 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + +YP CP I + LC CW + + ++N+ Sbjct: 11 LAPAVDLVYPPRCPCCGDGIERQEGLCLDCWQGLVLLGEPSCATCRRPIRNSGAEEGAVC 70 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + + I + TLY D S LV K+ R LA MMA+ + R Sbjct: 71 AACLADPPRHSGIYAATLYNDTSRRLVLAFKHGRRIALARMMAKLIQR 118 >gi|114570814|ref|YP_757494.1| phosphoribosyltransferase [Maricaulis maris MCS10] gi|114341276|gb|ABI66556.1| phosphoribosyltransferase [Maricaulis maris MCS10] Length = 255 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 8/114 (7%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-------EHILKNNKDNIDKD 65 L +P +CP+ ++ L WS++ F+ A Sbjct: 14 RRLADLAWPPVCPLAGDTVDRAGHLTPQAWSRLTFLDAPWCDTCGWPFPYPAGSGGASLA 73 Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + + R+ Y LV K+ R ++ +WM R + Sbjct: 74 VCANCIANPPRFDRARAPLAYDARVSPLVVGFKHGSRREMIGQFGRWMVRAGKD 127 >gi|149184493|ref|ZP_01862811.1| amidophosphoribosyltransferase [Erythrobacter sp. SD-21] gi|148831813|gb|EDL50246.1| amidophosphoribosyltransferase [Erythrobacter sp. SD-21] Length = 262 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 5/113 (4%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 + V+ I +YP CP I + LC CWS + Sbjct: 17 RAVREGIAPFVDLVYPPRCPACGEAIGEQGGLCAECWSGLAIPGDPSCAACQRPFGEVGP 76 Query: 66 -----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 ++ I + TLY ++S LV LK+ R LA ++A+ M Sbjct: 77 KEGSFCAPCLENAPIHDGIAAGTLYTEVSRKLVLALKHGRRIALAKLLARLMT 129 >gi|326403688|ref|YP_004283770.1| putative phosphoribosyltransferase [Acidiphilium multivorum AIU301] gi|325050550|dbj|BAJ80888.1| putative phosphoribosyltransferase [Acidiphilium multivorum AIU301] Length = 241 Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 1/100 (1%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQI 79 P C S + LC C+ + FIT Sbjct: 15 PPQCLACSEEVPADGLLCVSCFVETSFITDPVCGQCGLPLAEPAPLCTSCDWAPPTFRSA 74 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 R+ Y + L+ KY DR +LAI +A+ + R +++ Sbjct: 75 RAALQYNAAAKRLILPFKYADRPELAIGLARLLLRPGKEL 114 >gi|114327260|ref|YP_744417.1| amidophosphoribosyltransferase family protein [Granulibacter bethesdensis CGDNIH1] gi|114315434|gb|ABI61494.1| amidophosphoribosyltransferase family protein [Granulibacter bethesdensis CGDNIH1] Length = 282 Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 12/131 (9%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINL------RFCLCGHCWSKIHFITATEHI 54 + A+ ++S + L + + P CP+ ++ LC C++ ++FI Sbjct: 15 LTAMPILIRSAGLHLLNWLIPPTCPVCHAETSMTGPDGLSGLLCASCFATLNFIVPPVCQ 74 Query: 55 LKNNKDNIDKD------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM 108 + + K R+ LY D S ++ K+ DR A ++ Sbjct: 75 CCGRPMDAAEGIAPDGVCEVCRIKPPRFRHARAALLYDDGSRRIILPFKHADRMAHASLL 134 Query: 109 AQWMFRVLEKI 119 A+WM + Sbjct: 135 ARWMADSGGDL 145 >gi|312115454|ref|YP_004013050.1| phosphoribosyltransferase [Rhodomicrobium vannielii ATCC 17100] gi|311220583|gb|ADP71951.1| phosphoribosyltransferase [Rhodomicrobium vannielii ATCC 17100] Length = 261 Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 5/121 (4%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNN 58 + + + I P++C + + LC CW + ITA L Sbjct: 5 VARFAAESLRYSTDLILPAVCVSCATPVTRHNLLCAKCWGDLVPITAPYCDRLGIPLPGY 64 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 D+ ++ + R+ +Y + L+ K+ DR + + + Sbjct: 65 DDSGPHLSAQAFTDPPVFDRARAACVYGGVIRKLIVRFKFEDRHEPLPLFLRLTREAGRD 124 Query: 119 I 119 + Sbjct: 125 L 125 >gi|254475054|ref|ZP_05088440.1| competence protein F [Ruegeria sp. R11] gi|214029297|gb|EEB70132.1| competence protein F [Ruegeria sp. R11] Length = 189 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 25/65 (38%) Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + D + P Q R+ LY + L+ LK+ DRTD+ A W+ + Sbjct: 1 MMGEDDGFAMACDDCLAHPRPWVQGRAALLYEGTARRLILGLKHGDRTDIVAPAADWLAK 60 Query: 115 VLEKI 119 + Sbjct: 61 ATAVL 65 >gi|295688314|ref|YP_003592007.1| phosphoribosyltransferase [Caulobacter segnis ATCC 21756] gi|295430217|gb|ADG09389.1| phosphoribosyltransferase [Caulobacter segnis ATCC 21756] Length = 256 Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 8/124 (6%) Query: 2 PAIIQTVKSIIIEL----FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN 57 A + EL + P I L L +SK+ F+ Sbjct: 6 KAAPSRARPFFAELGRGVLDLLLPPASL--DGEIALTGGLSASAFSKVTFLDDPVCDGCG 63 Query: 58 NKDNIDKD--PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + K + R+ +Y + S L+ LK+ DRTDL+ + A+W+ R Sbjct: 64 LAQAYEAETRCPACQAKPRAFQRARAACVYDEHSRELILKLKHADRTDLSGLFARWLSRA 123 Query: 116 LEKI 119 + Sbjct: 124 SADL 127 >gi|225677126|ref|ZP_03788126.1| putative competence protein F [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590830|gb|EEH12057.1| putative competence protein F [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 241 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKS 69 ++ + + I+PS+C II+ LC C KI+F+T + + + K Sbjct: 5 LLKKATNLIFPSVCVSCECIIDENLNLCSECNKKINFLTKHYCNVCGVVISDNIYTCGKC 64 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + P +RSV Y S ++ K+ D + + A+W+ + + Sbjct: 65 IINPPPFKVLRSVFAYDQHSRNMIINFKFFDNLNYVKIYAKWIHQANQD 113 >gi|58697413|ref|ZP_00372723.1| competence protein F, interruption-N [Wolbachia endosymbiont of Drosophila simulans] gi|225630605|ref|YP_002727396.1| putative competence protein F [Wolbachia sp. wRi] gi|58536171|gb|EAL59759.1| competence protein F, interruption-N [Wolbachia endosymbiont of Drosophila simulans] gi|225592586|gb|ACN95605.1| putative competence protein F [Wolbachia sp. wRi] Length = 243 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKS 69 ++ + + I+PS+C II+ LC C KI+F+T + + + K Sbjct: 5 LLKKATNLIFPSVCVSCECIIDENLNLCSECNKKINFLTKHYCNVCGVVISDNIYTCGKC 64 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + P +RSV Y S ++ K+ D + + A+W+ + + Sbjct: 65 IINPPPFKVLRSVFAYDQHSRNMIINFKFFDNLNYVKIYAKWIHQANQD 113 >gi|149912918|ref|ZP_01901452.1| competence protein F, putative [Roseobacter sp. AzwK-3b] gi|149813324|gb|EDM73150.1| competence protein F, putative [Roseobacter sp. AzwK-3b] Length = 190 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + ++ + ++ P + R+ LY D LV LK+ DR D+ A+WM R Sbjct: 1 MPGENNDTPEYCDDCLRYAKPWSMGRAAVLYRDNGRKLVLGLKHADRHDIVRPAARWMAR 60 Query: 115 VLEKI 119 + + Sbjct: 61 AAQPM 65 >gi|83950741|ref|ZP_00959474.1| competence protein F, putative [Roseovarius nubinhibens ISM] gi|83838640|gb|EAP77936.1| competence protein F, putative [Roseovarius nubinhibens ISM] Length = 195 Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 24/69 (34%) Query: 51 TEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + P + R+ LY M LV LK+ DR D+ + Sbjct: 2 PGEQEPGGPGAEPAQCDACLVRVRPWARGRAAMLYESMGRRLVLGLKHGDRHDVLRPAGR 61 Query: 111 WMFRVLEKI 119 W+ R +I Sbjct: 62 WLARAGREI 70 >gi|85708603|ref|ZP_01039669.1| amidophosphoribosyltransferase [Erythrobacter sp. NAP1] gi|85690137|gb|EAQ30140.1| amidophosphoribosyltransferase [Erythrobacter sp. NAP1] Length = 287 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 5/112 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66 + + +YP CP+ + + LC CW I + + + + Sbjct: 24 LSPVVDLVYPPRCPLCGTALASQGGLCSECWGDIEVLGEPACSGCQRPMGSAAASASDHC 83 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + + I + +LY D S L+ K+ + +A ++A + + Sbjct: 84 FACVSEPPLHDGIIAASLYNDASRKLILAFKHGGKIAIAPLLAGLIAARMAP 135 >gi|114797458|ref|YP_761845.1| ComF family protein [Hyphomonas neptunium ATCC 15444] gi|114737632|gb|ABI75757.1| ComF family protein [Hyphomonas neptunium ATCC 15444] Length = 252 Score = 77.7 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 4/123 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 M A K + ++P I L ++KI FIT Sbjct: 1 MKAGRLAAKGLFRRTRDFLWPPRSLISGDRGEGAGPLRPDEFTKIRFITDPVCNRCGVPQ 60 Query: 61 NIDKDPLK----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 + D P M + + R+ +Y D+S V LK R D ++ WM + Sbjct: 61 DFDAGPDAECPACMARPPRWGRARAAFVYDDVSRRPVLDLKRAGRRDGLETLSGWMVQAG 120 Query: 117 EKI 119 + Sbjct: 121 GAL 123 >gi|254418197|ref|ZP_05031921.1| Phosphoribosyl transferase domain protein [Brevundimonas sp. BAL3] gi|196184374|gb|EDX79350.1| Phosphoribosyl transferase domain protein [Brevundimonas sp. BAL3] Length = 264 Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 7/120 (5%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 + ++ + L + P + L WS+I F+ A D Sbjct: 17 RQLRDMGRGLADLVLPPLAHDSREATAA-AGLTPDAWSRIKFLDAPVCDGCGAAFEFDGG 75 Query: 66 ------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + + R+ +Y D S L+ K+ D+ A + A+W+ R + Sbjct: 76 AFAETRCAACIAQPYVFARARAACVYDDHSRSLILRYKHGDQQQFASLFARWIGRAATDL 135 >gi|16125083|ref|NP_419647.1| competence protein F [Caulobacter crescentus CB15] gi|13422081|gb|AAK22815.1| competence protein F [Caulobacter crescentus CB15] Length = 265 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 6/116 (5%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK----DNID 63 ++ + L + P ++ L ++K+ FI D Sbjct: 23 LRGLGRGLLDLVLPPASLDGGPALS--GGLSPAAFAKVTFIDDPVCDGCGLAMAYVDAAA 80 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + K + R+ +Y + S LV +LK+ DR DLA + A+W+ R ++ Sbjct: 81 ERCPACQAKPKTFARARAACVYDEHSRDLVLMLKHADRVDLAGLFARWLSRAAGEL 136 >gi|148553483|ref|YP_001261065.1| phosphoribosyltransferase [Sphingomonas wittichii RW1] gi|148498673|gb|ABQ66927.1| phosphoribosyltransferase [Sphingomonas wittichii RW1] Length = 248 Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 4/118 (3%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 M ++ ++ I P CP I C CWS + F+ + Sbjct: 1 MRLLVGGLRGIAGAGLRFALPPRCPGCGVITPDMHQFCLDCWSALDFLGDPQCARCGAPF 60 Query: 61 NIDKDPLK----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 +D P +R+ Y ++ L LKY R +A +A + R Sbjct: 61 EVDPGPGALCGGCHADPPAFDSMRAAVAYGPIARALALKLKYGRRPGIAHTVAAQLRR 118 >gi|326389598|ref|ZP_08211164.1| phosphoribosyltransferase [Thermoanaerobacter ethanolicus JW 200] gi|325994313|gb|EGD52739.1| phosphoribosyltransferase [Thermoanaerobacter ethanolicus JW 200] Length = 229 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 3/107 (2%) Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 ++P C I I LC C S + FI + + + L ++ Sbjct: 3 FLDLLFPPKTTCIICKTAI-KTGYLCDKCKSTLKFIEGNRCNICGKPIDYEGTCLDCLEH 61 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Q S Y + L+ KY +LA A +M ++K+ Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGRFKYFKERELAPFFADYMADAVKKM 108 >gi|256750931|ref|ZP_05491815.1| phosphoribosyltransferase [Thermoanaerobacter ethanolicus CCSD1] gi|256750266|gb|EEU63286.1| phosphoribosyltransferase [Thermoanaerobacter ethanolicus CCSD1] Length = 229 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 3/107 (2%) Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 ++P C I I LC C S + FI + + + L ++ Sbjct: 3 FLDLLFPPKTTCIICKTAI-KTGYLCDKCKSTLKFIEGNRCNICGKPIDYEGTCLDCLEH 61 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Q S Y + L+ KY +LA A +M ++K+ Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGRFKYFKERELAPFFADYMADAVKKM 108 >gi|91205443|ref|YP_537798.1| competence protein F [Rickettsia bellii RML369-C] gi|91068987|gb|ABE04709.1| Competence protein F [Rickettsia bellii RML369-C] Length = 146 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 4/107 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----D 63 + + L I P C S I++ CG CW K+ FI + + ++ + Sbjct: 2 LVKVYNYLIDYILPQRCLSCSEILSSSGEFCGDCWQKLEFIAKPYCNICGQRFSVKILDN 61 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + K RS+ + + S +V KY D+T A A+ Sbjct: 62 AVCGRCYSKKPNYNLARSIFKFNEYSKKVVHQFKYQDKTIFAKTFAK 108 >gi|118581139|ref|YP_902389.1| competence protein F [Pelobacter propionicus DSM 2379] gi|118503849|gb|ABL00332.1| competence protein F, putative [Pelobacter propionicus DSM 2379] Length = 245 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 5/106 (4%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNKD---NID 63 KS L + + P C + I L C C ++ T + D Sbjct: 7 KSFFTALLNFLLPPHCHVCGEFIPRAGRLHICSSCRERMPAPTQPICPICGIPFQGAGHD 66 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 ++ R+ L+ L+ KY+ RT L + Sbjct: 67 HPCQSCLKHPPHFHAARAALLHEGPVRDLIHAFKYNARTHLRRPLG 112 >gi|307265486|ref|ZP_07547041.1| phosphoribosyltransferase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919440|gb|EFN49659.1| phosphoribosyltransferase [Thermoanaerobacter wiegelii Rt8.B1] Length = 229 Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 3/107 (2%) Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 ++P C I I LC C S + FI + + + ++ Sbjct: 3 FLDLLFPPKTTCIICKTAI-KTGYLCDKCKSTLKFIEGNRCSICGKPTDYEGTCPDCLEH 61 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Q S Y + L+ KY +LA A +M ++K+ Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGRFKYFKERELAPFFADYMADAVKKM 108 >gi|167038183|ref|YP_001665761.1| phosphoribosyltransferase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039108|ref|YP_001662093.1| phosphoribosyltransferase [Thermoanaerobacter sp. X514] gi|300913302|ref|ZP_07130619.1| phosphoribosyltransferase [Thermoanaerobacter sp. X561] gi|307723684|ref|YP_003903435.1| phosphoribosyltransferase [Thermoanaerobacter sp. X513] gi|320116592|ref|YP_004186751.1| phosphoribosyltransferase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853348|gb|ABY91757.1| phosphoribosyltransferase [Thermoanaerobacter sp. X514] gi|166857017|gb|ABY95425.1| phosphoribosyltransferase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300889987|gb|EFK85132.1| phosphoribosyltransferase [Thermoanaerobacter sp. X561] gi|307580745|gb|ADN54144.1| phosphoribosyltransferase [Thermoanaerobacter sp. X513] gi|319929683|gb|ADV80368.1| phosphoribosyltransferase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 229 Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 3/107 (2%) Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 ++P C I +I LC C S + FI + + + ++ Sbjct: 3 FLDLLFPPKTTCIICKTVI-KTGYLCDKCKSTLKFIEGNRCSICGKPIDYEGTCPDCLEH 61 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Q S Y + L+ KY +LA A +M ++K+ Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGRFKYFKERELAPFFADYMADAVKKM 108 >gi|328953683|ref|YP_004371017.1| phosphoribosyltransferase [Desulfobacca acetoxidans DSM 11109] gi|328454007|gb|AEB09836.1| phosphoribosyltransferase [Desulfobacca acetoxidans DSM 11109] Length = 239 Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 6/94 (6%) Query: 12 IIELFHCIYPSICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL-- 67 + L P C ++ + +C CW ++ IT P Sbjct: 6 LRALLDFFLPRFCLFCHAPLSLEVEHLICPDCWKELPLITTPYCSCCGAPFKGAVGPEHL 65 Query: 68 --KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 K P + R+ Y + LKY Sbjct: 66 CQTCTIKPPPFDRARAAARYEGSIRDAIHRLKYQ 99 >gi|329847920|ref|ZP_08262948.1| phosphoribosyl transferase domain protein [Asticcacaulis biprosthecum C19] gi|328842983|gb|EGF92552.1| phosphoribosyl transferase domain protein [Asticcacaulis biprosthecum C19] Length = 272 Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 13/126 (10%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRF----CLCGHCWSKIHFITATEHILKNNK 59 ++ L ++P ++ + WS+I F+ + Sbjct: 24 TWAHLRGTAGRLMDVVFPPHGLG---EVDEDGAGAVGMEAGRWSRIRFLDRDGCDMCARP 80 Query: 60 D------NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 ++ P T+ R+ LY + S ++ K+ DR D M+ +W+ Sbjct: 81 FDGGLHLGVEGRCTACESDPFPFTRGRAACLYSEASKGVILGFKHGDRLDARPMLTRWLE 140 Query: 114 RVLEKI 119 R + Sbjct: 141 RAATDV 146 >gi|163732997|ref|ZP_02140441.1| competence protein F, putative [Roseobacter litoralis Och 149] gi|161393532|gb|EDQ17857.1| competence protein F, putative [Roseobacter litoralis Och 149] Length = 175 Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 26/50 (52%) Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 M T+ R+ LY D + +V LK+ DR ++A A WM R +E + Sbjct: 1 MITPRSWTKGRAALLYKDNARRMVLALKHGDRQEIAEPAALWMSRAIEDL 50 >gi|157827199|ref|YP_001496263.1| competence protein F [Rickettsia bellii OSU 85-389] gi|157802503|gb|ABV79226.1| Competence protein F [Rickettsia bellii OSU 85-389] Length = 193 Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 4/100 (4%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSM 70 + I P C S I++ CG CW K+ FI + + ++ + + Sbjct: 1 MIDYILPQRCLSCSEILSSSGEFCGDCWQKLEFIAKPYCNICGQRFSVKILDNAVCGRCY 60 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 K RS+ + + S +V KY D+T A A+ Sbjct: 61 SKKPNYNLARSIFKFNEYSKKVVHQFKYQDKTIFAKTFAK 100 >gi|329888704|ref|ZP_08267302.1| phosphoribosyl transferase domain protein [Brevundimonas diminuta ATCC 11568] gi|328847260|gb|EGF96822.1| phosphoribosyl transferase domain protein [Brevundimonas diminuta ATCC 11568] Length = 268 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 7/122 (5%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 + + L + P + SR L WS++ F+ A D Sbjct: 19 LASGARDTGRGLLDILLPPVAHD-SREAAASAGLSPDAWSRVAFLEAPVCDGCGAAFEYD 77 Query: 64 KD------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + + R+ +Y + S ++ K+ D+ A + A+W+ R Sbjct: 78 GGDFAAERCAACVASPYAFGRARAACVYDEASRGIILKFKHGDQQQFAPLFARWISRSAA 137 Query: 118 KI 119 + Sbjct: 138 PL 139 >gi|189184533|ref|YP_001938318.1| hypothetical protein OTT_1626 [Orientia tsutsugamushi str. Ikeda] gi|189181304|dbj|BAG41084.1| hypothetical protein OTT_1626 [Orientia tsutsugamushi str. Ikeda] Length = 248 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 19 IYPSICPIYSRIINL--RFCLCGHCWSKIHFITATEHILKN----NKDNIDKDPLKSMQK 72 +P C ++I LC CW+KI+FIT D LK Sbjct: 23 FFPRQCLTCQQLIQSALPAGLCSTCWNKINFITLPFCQKCGRALPYDYGADVICLKCCHT 82 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 R++ ++ + S L+ KY+D+ +A+M+AQ Sbjct: 83 APNYELARALLIFNEDSKFLIHAFKYYDKPLIAMMLAQ 120 >gi|254504618|ref|ZP_05116769.1| Phosphoribosyl transferase domain protein [Labrenzia alexandrii DFL-11] gi|222440689|gb|EEE47368.1| Phosphoribosyl transferase domain protein [Labrenzia alexandrii DFL-11] Length = 200 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 3/69 (4%) Query: 50 ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 T ++ + +++ ++R+V Y + LV LK+ R +LA M Sbjct: 2 GTPFTHDVGENALSP---RAIADPPEFDRLRAVAFYSGPAKDLVLALKFARRRELAEAMG 58 Query: 110 QWMFRVLEK 118 WM R + Sbjct: 59 IWMARSGNE 67 >gi|148284486|ref|YP_001248576.1| competence protein F [Orientia tsutsugamushi str. Boryong] gi|146739925|emb|CAM79923.1| competence protein F [Orientia tsutsugamushi str. Boryong] Length = 249 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 19 IYPSICPIYSRIINL--RFCLCGHCWSKIHFITATEHILKN----NKDNIDKDPLKSMQK 72 +P C ++I LC CW+KI+FIT D LK Sbjct: 24 FFPRQCLTCQQLIQSALPAGLCSTCWNKINFITLPFCQKCGRALPYDYGADVICLKCCHA 83 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 R++ ++ + S L+ KY+D+ +A+M+AQ Sbjct: 84 VPNYELARALLIFNEDSKFLIHAFKYYDKPLIAMMLAQ 121 >gi|294085486|ref|YP_003552246.1| putative competence protein F [Candidatus Puniceispirillum marinum IMCC1322] gi|292665061|gb|ADE40162.1| putative competence protein F (COMF) [Candidatus Puniceispirillum marinum IMCC1322] Length = 238 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---PLKSM 70 +L + + P +CP LC CW ++ I+ + Sbjct: 12 QLANILLPHLCPHCRTFCEG-AGLCAACWQRLEQISTPFCSCCGRPLPYALPDTRCARCW 70 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 PL IR+ Y D++ LV K+ D L ++A+ + R +++ Sbjct: 71 VAPPPLASIRAACRYDDIASTLVIRYKHADALHLTPLLARLVRRFFDEL 119 >gi|67459283|ref|YP_246907.1| competence protein F [Rickettsia felis URRWXCal2] gi|67004816|gb|AAY61742.1| Competence protein F [Rickettsia felis URRWXCal2] Length = 118 Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 4/102 (3%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----D 63 + + + + I P C S I+ C CW K+ FI + + +I + Sbjct: 2 LVKVYNSVINYILPQRCLSCSEILGGSGEFCSDCWKKLEFIARPYCSICGQRFSIKILDN 61 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 RS+ + + S +V K D+T A Sbjct: 62 CICGNCYSNKPNYDLARSLFKFNEHSKKIVHQFKCQDKTIFA 103 >gi|297544021|ref|YP_003676323.1| phosphoribosyltransferase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841796|gb|ADH60312.1| phosphoribosyltransferase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 229 Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 3/107 (2%) Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 ++P C I I LC C + + FI + + + L ++ Sbjct: 3 FLDLLFPPKTTCIICKAAI-KTGYLCDKCKTALKFIEDDRCNICGKPIDYEGTCLDCLEH 61 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Q S Y + L+ KY + +LA A +M ++K+ Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGQFKYFKKRELAPFFADYMADAVKKM 108 >gi|289577708|ref|YP_003476335.1| phosphoribosyltransferase [Thermoanaerobacter italicus Ab9] gi|289527421|gb|ADD01773.1| phosphoribosyltransferase [Thermoanaerobacter italicus Ab9] Length = 229 Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 3/107 (2%) Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 ++P C I I LC C + + FI + + + L ++ Sbjct: 3 FLDLLFPPKTTCIICKAAI-KTGYLCDKCKTALKFIEDDRCNICGKPIDYEGTCLDCLEH 61 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Q S Y + L+ KY + +LA A +M ++K+ Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGQFKYFKKRELAPFFADYMADAVKKM 108 >gi|304317615|ref|YP_003852760.1| phosphoribosyltransferase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779117|gb|ADL69676.1| phosphoribosyltransferase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 229 Score = 70.3 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 3/100 (3%) Query: 15 LFHCIYPSI--CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 ++P C + ++I +C C SK+ FI+ I+ + + M+ Sbjct: 3 FLDLLFPPKTNCILCGKMI-REGKICDDCESKLPFISGNTCIVCGKPIDTGEKCPDCMEY 61 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + ++ S Y + L+ KY+ +L+ A++M Sbjct: 62 EHIFSRSISAFEYDETMKSLIARFKYYKERNLSEFFAEYM 101 >gi|302381420|ref|YP_003817243.1| phosphoribosyltransferase [Brevundimonas subvibrioides ATCC 15264] gi|302192048|gb|ADK99619.1| phosphoribosyltransferase [Brevundimonas subvibrioides ATCC 15264] Length = 249 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 7/113 (6%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------P 66 L + P + L W+++ F+ D Sbjct: 9 RGLADLVLPPMAHDSREAT-QAAGLTADAWNRVAFLEDPVCDGCGAAFEYDGGDFASERC 67 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + T+ R+ +Y D S L+ K+ D+ A + A+W+ R + Sbjct: 68 AACLASPYRFTRCRAACVYDDASRGLILKYKHGDQQQFAGLFARWLGRAAAPL 120 >gi|53804513|ref|YP_113594.1| competence protein F [Methylococcus capsulatus str. Bath] gi|53758274|gb|AAU92565.1| competence protein F [Methylococcus capsulatus str. Bath] Length = 233 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 3/94 (3%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQKDLPL 76 IYP C + R LCG C ++ T T + + + ++ P Sbjct: 15 IYPPTCLLCGDDGQRRLDLCGACERQLP-RTGTACLRCGEALPEGAPSPCGRCLRHPPPF 73 Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 R+ Y + L+ LK+ R A + + Sbjct: 74 DSCRAAFRYEEPIRHLIHGLKFGHRHACARTLGE 107 >gi|309390162|gb|ADO78042.1| phosphoribosyltransferase [Halanaerobium praevalens DSM 2228] Length = 248 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 8/109 (7%) Query: 10 SIIIELFHCIYP--SICPIYSRIINLR--FCLCGHCWSKIHFITATEHILK----NNKDN 61 ++ L +YP +C R + +C C +K FIT + Sbjct: 2 KVLDILKDLVYPEKPVCLACGRRYDHSEIKAICDRCLAKFSFITEACPLCGREVIPAALI 61 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + ++ P RSV Y + ++ KY R DLA ++ Sbjct: 62 EGHPCPECEKEKPPYNFARSVFSYAGYAREVLLEYKYGHRPDLAKPFSR 110 >gi|4768852|gb|AAD29646.1|AF124757_6 competence protein F [Zymomonas mobilis subsp. mobilis ZM4] Length = 258 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 4/84 (4%) Query: 35 FCLCGHCWSKIHFITATEHILKNNK----DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSC 90 C CW +HF+ I + + +Q ++ + Y ++S Sbjct: 18 HSFCVECWQSLHFLVEPACIQCGFPLPRDQQYEPLCGRCLQHPPSFDRMNAAVAYDEISR 77 Query: 91 VLVRLLKYHDRTDLAIMMAQWMFR 114 L+ KY +T LA MA+ M R Sbjct: 78 QLILRCKYGKQTMLARDMAKLMMR 101 >gi|189425986|ref|YP_001953163.1| competence protein F [Geobacter lovleyi SZ] gi|189422245|gb|ACD96643.1| competence protein F, putative [Geobacter lovleyi SZ] Length = 243 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 5/96 (5%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNKD---NI 62 ++++ L + P C I + + L C C + + + Sbjct: 5 LRTLATALQDLLLPPRCHICHKPVPDAGRLHICPDCRVGLPLAGSPVCSICGIPFQSAGD 64 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 D + + P T R+ Y L+ KY Sbjct: 65 DHPCSRCIAAPPPYTAARAALRYEGACRDLIHHFKY 100 >gi|85859102|ref|YP_461304.1| amidophosphoribosyltransferase family protein [Syntrophus aciditrophicus SB] gi|85722193|gb|ABC77136.1| amidophosphoribosyltransferase family protein [Syntrophus aciditrophicus SB] Length = 239 Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 6/98 (6%) Query: 8 VKSIIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 + S+ + +P C ++ C C +I F++ + + Sbjct: 1 MNSLFKGIADLFFPPRCLSCHELLISGESGGFCPKCLQRISFLSPPICASCGAPLSPEAG 60 Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 L+ P + RSV Y + + LKY Sbjct: 61 KDALCLRCAATRPPFERCRSVGRYETVLLEAIHDLKYR 98 >gi|197120667|ref|YP_002132618.1| phosphoribosyltransferase [Anaeromyxobacter sp. K] gi|196170516|gb|ACG71489.1| phosphoribosyltransferase [Anaeromyxobacter sp. K] Length = 228 Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 3/106 (2%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +++ + L +YP C + C C + + + Sbjct: 2 LRAAVRALLDLVYPPRCAACGEPVTEE-PFCDVCAGALEPV--PPGCDRCGAPGPGPACG 58 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + +R+ L+ V LKY R DLA + W+ Sbjct: 59 ACLAAPPAFDAVRAGGLFGGPLADAVHALKYGGRPDLARPLGAWLA 104 >gi|68171519|ref|ZP_00544900.1| competence protein F [Ehrlichia chaffeensis str. Sapulpa] gi|88658293|ref|YP_506971.1| putative competence protein F [Ehrlichia chaffeensis str. Arkansas] gi|67999066|gb|EAM85736.1| competence protein F [Ehrlichia chaffeensis str. Sapulpa] gi|88599750|gb|ABD45219.1| putative competence protein F [Ehrlichia chaffeensis str. Arkansas] Length = 230 Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-ILKNNKDNIDKDPLKS 69 ++ ++F+ I+P C +I+ LC C S I+F+ + N K Sbjct: 1 MLGKIFNIIFPKTCANCECVISSNHDLCSTCKSNINFLCDNYCIACGCSLPNKVSICGKC 60 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + T++ SV Y S ++ LK+ D T +WM Sbjct: 61 VPNPPKFTKLESVFSYNKHSKNMILNLKFSDNTLHVKTYGKWM 103 >gi|86156665|ref|YP_463450.1| phosphoribosyltransferase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773176|gb|ABC80013.1| phosphoribosyltransferase [Anaeromyxobacter dehalogenans 2CP-C] Length = 228 Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 3/106 (2%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +++ + L +YP C + C C + + + Sbjct: 2 LRAAVRALLDLVYPPRCAACGEPVAEE-PFCEVCAGALEPV--PPGCARCGAPGAGPACG 58 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + +R+ L+ V LKY R DLA + W+ Sbjct: 59 ACLAAPPAFDAVRAGGLFGGPLADAVHALKYGGRPDLARPLGAWLA 104 >gi|220915379|ref|YP_002490683.1| phosphoribosyltransferase [Anaeromyxobacter dehalogenans 2CP-1] gi|219953233|gb|ACL63617.1| phosphoribosyltransferase [Anaeromyxobacter dehalogenans 2CP-1] Length = 228 Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 3/106 (2%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +++ + L +YP C + C C + + + Sbjct: 2 LRAAVRALLDLVYPPRCAACGEPVAEE-PFCEVCAGALEPV--PPGCDRCGAPGPGPACG 58 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + +R+ L+ V LKY R DLA + W+ Sbjct: 59 ACLAAPPAFDVVRAGGLFGGPLADAVHALKYGGRPDLARPLGAWLA 104 >gi|197120132|ref|YP_002140559.1| amidophosphoribosyltransferase [Geobacter bemidjiensis Bem] gi|197089492|gb|ACH40763.1| amidophosphoribosyltransferase, putative [Geobacter bemidjiensis Bem] Length = 239 Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 7/97 (7%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNKDNIDKD--- 65 L +P +C + I L C C K+ F+T + DK Sbjct: 2 FFRPLLDLFFPPLCHVCRAFIPEAGELFICADCLDKVTFLTTPLCTICGAPFATDKGSNH 61 Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101 + P RS + L+ KY R Sbjct: 62 TCGACLLH-PPFHTCRSALILEGAVQQLIHRFKYGGR 97 >gi|78224524|ref|YP_386271.1| phosphoribosyltransferase [Geobacter metallireducens GS-15] gi|78195779|gb|ABB33546.1| Phosphoribosyltransferase [Geobacter metallireducens GS-15] Length = 242 Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 6/105 (5%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNK----DNIDK 64 ++ ++P +C + + L C C + IT+ + ID Sbjct: 3 LLRAFLDVLFPPLCHLCKAPVPGAGPLHLCDACLGAMTPITSPLCPVCGVPHRTEGGIDH 62 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 M P +R L+ L+ KY + L +A Sbjct: 63 LCGSCMLTPPPFDGVRGALLFDGPLQELIHRHKYGHKVHLRRPLA 107 >gi|253702441|ref|YP_003023630.1| phosphoribosyltransferase [Geobacter sp. M21] gi|251777291|gb|ACT19872.1| phosphoribosyltransferase [Geobacter sp. M21] Length = 239 Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 29/97 (29%), Gaps = 7/97 (7%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNKDNIDKD--- 65 + L +P +C + I L C C K+ F+T + DK Sbjct: 2 LFRPLLDLFFPPLCHVCRAFIPEAGELFICADCLDKVTFLTTPLCPVCGAPFATDKGSDH 61 Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101 + P RS L ++ KY R Sbjct: 62 TCGACLLH-PPFHTCRSALLLEGGVQQMIHRFKYGGR 97 >gi|39995235|ref|NP_951186.1| competence protein F [Geobacter sulfurreducens PCA] gi|39981997|gb|AAR33459.1| competence protein F, putative [Geobacter sulfurreducens PCA] gi|298504239|gb|ADI82962.1| amidophosphoribosyltransferase, putative [Geobacter sulfurreducens KN400] Length = 238 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 6/105 (5%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNK----DNIDK 64 I+ L ++P +C + I L C C ++ I + + ID Sbjct: 2 IVRALLDILFPPLCHLCRAPIPGAEKLHLCPACLARAKPIGSPLCTVCGVPFATEGGIDH 61 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + P R+ L+ LV KY + L +A Sbjct: 62 RCGDCIVSPPPYEGARAAYLFEGPVQELVHRFKYGHKAHLRRPLA 106 >gi|148260495|ref|YP_001234622.1| phosphoribosyltransferase [Acidiphilium cryptum JF-5] gi|146402176|gb|ABQ30703.1| phosphoribosyltransferase [Acidiphilium cryptum JF-5] Length = 217 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 1/88 (1%) Query: 33 LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQIRSVTLYCDMSCV 91 LC C+ + FIT R+ Y + Sbjct: 3 ADGLLCVSCFVETSFITDPVCGQCGLPLAEPAPLCTSCDWAPPTFRSARAALQYNAAAKR 62 Query: 92 LVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 L+ KY DR +LAI +A+ + R +++ Sbjct: 63 LILPFKYADRPELAIGLARLLLRPGKEL 90 >gi|323706361|ref|ZP_08117926.1| phosphoribosyltransferase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534323|gb|EGB24109.1| phosphoribosyltransferase [Thermoanaerobacterium xylanolyticum LX-11] Length = 229 Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 3/106 (2%) Query: 15 LFHCIYPSI--CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 ++P C + ++I +C C +K+ FI + M+ Sbjct: 3 FLDLLFPPKTNCLLCGKVI-KEGKICFECENKLPFIIGNRCSVCGKPIRDGDRCPDCMEI 61 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + T+ S Y + L+ KY+ LA A++M+R +++ Sbjct: 62 NHVFTRSISPFEYDETIKSLIARFKYYKERSLAEFFAEYMYRCIQE 107 >gi|221233810|ref|YP_002516246.1| amidophosphoribosyltransferase family protein [Caulobacter crescentus NA1000] gi|220962982|gb|ACL94338.1| amidophosphoribosyltransferase family protein [Caulobacter crescentus NA1000] Length = 208 Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 45 IHFITATEHILKNNK----DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHD 100 + FI D + K + R+ +Y + S LV +LK+ D Sbjct: 1 MTFIDDPVCDGCGLAMAYVDAAAERCPACQAKPKTFARARAACVYDEHSRDLVLMLKHAD 60 Query: 101 RTDLAIMMAQWMFRVLEKI 119 R DLA + A+W+ R ++ Sbjct: 61 RVDLAGLFARWLSRAAGEL 79 >gi|326387515|ref|ZP_08209122.1| phosphoribosyltransferase [Novosphingobium nitrogenifigens DSM 19370] gi|326208004|gb|EGD58814.1| phosphoribosyltransferase [Novosphingobium nitrogenifigens DSM 19370] Length = 281 Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 19/121 (15%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKD---- 65 + + ++P CP+ + LC CW + + D I + Sbjct: 7 LAPIIDLVFPPRCPLCGAALAQHGGLCVECWGGLAIPGEPACSQCQRPLPDRIAQQGADA 66 Query: 66 -------------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 M + I + TLY + S L+ K+ R L ++ + M Sbjct: 67 ALATADAARGAWVCAPCMARPPRHEGIAAATLYNEASRRLIMAFKHGRRIGLGPLLVRLM 126 Query: 113 F 113 Sbjct: 127 V 127 >gi|58038532|ref|YP_190496.1| competence protein F [Gluconobacter oxydans 621H] gi|58000946|gb|AAW59840.1| Competence protein F [Gluconobacter oxydans 621H] Length = 228 Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 6/93 (6%) Query: 33 LRFCLCGHCWSKIHFITATEHILKNNK------DNIDKDPLKSMQKDLPLTQIRSVTLYC 86 CG C+ H I + R+ +Y Sbjct: 2 TEGAFCGTCFQAAHRIVSPSCHRCGVPLENEGLGGPQNCCAACQAHPPVWRSARAAFVYD 61 Query: 87 DMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 S L+ LKY D T+ A +M + M E + Sbjct: 62 TWSRRLILPLKYSDHTENAAVMGRQMASAAEDM 94 >gi|220933320|ref|YP_002512219.1| competence protein F [Thioalkalivibrio sp. HL-EbGR7] gi|219994630|gb|ACL71232.1| competence protein F [Thioalkalivibrio sp. HL-EbGR7] Length = 237 Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 2/111 (1%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIH-FITATEHILKNNKDNIDKD 65 + ++ L +YP +C + LC C + F + Sbjct: 8 SAGGLLGALLRWLYPPVCLLCRAPGAGDLDLCPGCRGDLPWFGHGCPACARPLPPGAGPL 67 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ-WMFRV 115 +++ P ++ Y L+ LKY R A ++ + W Sbjct: 68 CGACLKRPPPFDATHALFHYAAPVDRLITGLKYRGRLSHARLLGELWASHA 118 >gi|222053719|ref|YP_002536081.1| amidophosphoribosyltransferase-like protein [Geobacter sp. FRC-32] gi|221563008|gb|ACM18980.1| amidophosphoribosyltransferase-like protein [Geobacter sp. FRC-32] Length = 239 Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 6/110 (5%) Query: 11 IIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNK----DNIDK 64 + L I+P +C + I LC C ++H + + + D ID Sbjct: 1 MFRSLLDIIFPPLCHLCRVYIPNAGDVHLCTSCLEQLHPVASPLCPICGVPFATEDGIDH 60 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + R+ ++ L+ KY +T L+ +A R Sbjct: 61 RCGACSVRRPAYVAARAAFVFDGPIQELIHRFKYAHKTHLSRPLALMTAR 110 >gi|312142839|ref|YP_003994285.1| phosphoribosyltransferase [Halanaerobium sp. 'sapolanicus'] gi|311903490|gb|ADQ13931.1| phosphoribosyltransferase [Halanaerobium sp. 'sapolanicus'] Length = 246 Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 37/112 (33%), Gaps = 9/112 (8%) Query: 11 IIIELFHCIYP--SICPIYSRIINLRF--CLCGHCWSKIHFITATEHILK----NNKDNI 62 ++ L YP +C R + +C C S+ FI + Sbjct: 1 MLEFLKDLFYPEKKVCLACERRYDHSEIEGMCDRCLSRFSFINHFCSVCGREVIPATLIG 60 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 D + +K P RSV Y ++ KY R DLA A M R Sbjct: 61 DHPCPECQEKRPPYNFARSVFTYAGYPREVLLEFKYGHRPDLAKPFAH-MLR 111 >gi|312127293|ref|YP_003992167.1| phosphoribosyltransferase [Caldicellulosiruptor hydrothermalis 108] gi|311777312|gb|ADQ06798.1| phosphoribosyltransferase [Caldicellulosiruptor hydrothermalis 108] Length = 231 Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 9/111 (8%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69 + +L +P C R+ C C I FI+ D + Sbjct: 1 MEKLIEFFFPPRCAFCGRLGKSP---CDDCKKNIRFISGNTCQKCGIPIGDTTLQFCSSC 57 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLK----YHDRTDLAIMMAQWMFRVL 116 ++++ ++ V Y + V L K Y + + +MA+ + Sbjct: 58 LRENFAFERVFPVFYYEGVVRRGVHLFKYRGFYQNAITFSRLMAKKILEAG 108 >gi|56417308|ref|YP_154382.1| hypothetical protein AM1346 [Anaplasma marginale str. St. Maries] gi|222475671|ref|YP_002564088.1| Competence protein F (comF) [Anaplasma marginale str. Florida] gi|56388540|gb|AAV87127.1| hypothetical protein AM1346 [Anaplasma marginale str. St. Maries] gi|222419809|gb|ACM49832.1| Competence protein F (comF) [Anaplasma marginale str. Florida] Length = 249 Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 1/113 (0%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFI-TATEHILKNNK 59 + + +++++ ++ ++P IC II +C C I F+ + Sbjct: 9 LTGFLLLLRAVVSKICDALFPDICANCRTIIPRGKVVCDACTRAIRFLWEDFCVVCGAVA 68 Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + ++ I SV +Y + S +V LK+ D A+WM Sbjct: 69 QRHTNTCAGCAARPTHISAINSVFVYDECSKNMVLRLKFGDDLFHVRAYARWM 121 >gi|304322117|ref|YP_003855760.1| competence protein F [Parvularcula bermudensis HTCC2503] gi|303301019|gb|ADM10618.1| competence protein F [Parvularcula bermudensis HTCC2503] Length = 284 Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 12/123 (9%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 +++ + ++PS CP+ +++ L W+ + +TA + D Sbjct: 27 RALAARVGEVVFPSTCPVTGTLVSSPGTLSPAGWASLDHLTAPWCRQCGFPFTLVGDGPL 86 Query: 69 SMQ-------KDL-----PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 + L R+ Y ++S L+ +KY DR+D + + + RV Sbjct: 87 CLPCTGEGGLAPRLVGKDRLDAFRAPLAYDEVSADLILAIKYADRSDSLRVAGRLLARVA 146 Query: 117 EKI 119 + + Sbjct: 147 QAL 149 >gi|42520743|ref|NP_966658.1| competence protein F, interruption-N [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410483|gb|AAS14592.1| competence protein F, interruption-N [Wolbachia endosymbiont of Drosophila melanogaster] Length = 103 Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKS 69 ++ + + I+PS+C II+ LC C KI+F+T + + + K Sbjct: 5 LLKKATNLIFPSVCVSCECIIDENLNLCSECNKKINFLTKHYCNVCGVVISDNIYTCGKC 64 Query: 70 MQKDLPLTQIRSVTLYCDMSCVL 92 + P +RSV Y S + Sbjct: 65 IINPPPFKVLRSVFAYDQHSRNM 87 >gi|255004790|ref|ZP_05279591.1| Competence protein F (comF) [Anaplasma marginale str. Virginia] Length = 237 Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 1/106 (0%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFI-TATEHILKNNKDNIDKDP 66 +++++ ++ ++P IC II +C C I F+ + Sbjct: 4 LRAVVSKICDALFPDICANCRTIIPRGKVVCDACTRAIRFLWEDFCVVCGAVAQRHTNTC 63 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + ++ I SV +Y + S +V LK+ D A+WM Sbjct: 64 AGCAARPTHISAINSVFVYDECSKNMVLRLKFGDDLFHVRAYARWM 109 >gi|182415338|ref|YP_001820404.1| competence protein F, putative [Opitutus terrae PB90-1] gi|177842552|gb|ACB76804.1| competence protein F, putative [Opitutus terrae PB90-1] Length = 244 Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 7/95 (7%) Query: 12 IIELFHCIYPSICPIYSRIINLR---FCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65 + L ++P +C ++ LC C +++ ++ + + Sbjct: 8 LRGLSDVVFPPLCVHCRGLVPSEAEFRHLCPACSAQLDYVRPPHCSTCGHPFYGVVEGER 67 Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + R+ L + LV LKYH Sbjct: 68 MCPHCEGLAPAFREGRTAVLLKGPARGLVHELKYH 102 >gi|302871564|ref|YP_003840200.1| phosphoribosyltransferase [Caldicellulosiruptor obsidiansis OB47] gi|302574423|gb|ADL42214.1| phosphoribosyltransferase [Caldicellulosiruptor obsidiansis OB47] Length = 231 Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 5/90 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69 + +L +P C ++ C C I FI+ D Sbjct: 1 MEKLIEFFFPPRCAFCGKLGKSP---CEDCKKNIRFISGNACQKCGIPIGDTALPFCPSC 57 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++++ ++ V Y + V L KY Sbjct: 58 LRENFAFERVFPVFYYEGVVRKGVHLFKYR 87 >gi|254995474|ref|ZP_05277664.1| Competence protein F (comF) [Anaplasma marginale str. Mississippi] gi|255003665|ref|ZP_05278629.1| Competence protein F (comF) [Anaplasma marginale str. Puerto Rico] gi|269959168|ref|YP_003328957.1| putative amidophosphoribosyltransferase [Anaplasma centrale str. Israel] gi|269848999|gb|ACZ49643.1| putative amidophosphoribosyltransferase [Anaplasma centrale str. Israel] Length = 235 Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 1/106 (0%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFI-TATEHILKNNKDNIDKDP 66 +++++ ++ ++P IC II +C C I F+ + Sbjct: 2 LRAVVSKICDALFPDICANCRTIIPRGKVVCDACTRAIRFLWEDFCVVCGAVAQRHTNTC 61 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + ++ I SV +Y + S +V LK+ D A+WM Sbjct: 62 AGCAARPTHISAINSVFVYDECSKNMVLRLKFGDDLFHVRAYARWM 107 >gi|223939439|ref|ZP_03631317.1| competence protein F, putative [bacterium Ellin514] gi|223891931|gb|EEF58414.1| competence protein F, putative [bacterium Ellin514] Length = 247 Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 6/125 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYS--RIINLRFCLCGHCWSKIHFITATEHILKNN 58 M + ++++K + +YP +C I R + CW K+ FI Sbjct: 1 MISTLKSLKPWLDAGLSFVYPEVCQICGAERASASEGFVGPLCWEKVRFIQPPFCARCGL 60 Query: 59 KDNIDK----DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 D + + +L RS M +V KY +A + R Sbjct: 61 PYEGDITTTFECHNCKEMELHFRTARSAVTAEGMVLDIVHRYKYQRHMWFEAFLADLLIR 120 Query: 115 VLEKI 119 KI Sbjct: 121 QAAKI 125 >gi|218779784|ref|YP_002431102.1| phosphoribosyltransferase [Desulfatibacillum alkenivorans AK-01] gi|218761168|gb|ACL03634.1| phosphoribosyltransferase [Desulfatibacillum alkenivorans AK-01] Length = 252 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 10/122 (8%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINL------RFCLCGHCWSKIHFITATEHILKN 57 + +VK + +YP C I LC C + + Sbjct: 2 LTASVKVLKNAFLDALYPPKCAACGEFIPEAPPSPLPKFLCPDCLMDYTPAASPLCLKCG 61 Query: 58 ----NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + D ++K + R+ +Y + LKY+ +T LA M + Sbjct: 62 MPFVSPEGPDHLCGGCLEKKSRFNKARAAGVYDGPLRTAIHRLKYNQKTALAAPMGGMLE 121 Query: 114 RV 115 + Sbjct: 122 QA 123 >gi|332186893|ref|ZP_08388635.1| hypothetical protein SUS17_1939 [Sphingomonas sp. S17] gi|332013226|gb|EGI55289.1| hypothetical protein SUS17_1939 [Sphingomonas sp. S17] Length = 216 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 2/85 (2%) Query: 32 NLRFCLCGHCWSKIHFITATEHIL--KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89 C CW + F+ A+ + + I + Y ++ Sbjct: 2 ENDHRFCAACWGGLRFLDASGCPGCGMPGEGGTALRCGPCLADPPAHAGIYAAVAYGPIA 61 Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFR 114 L LK+ R +A MA M R Sbjct: 62 RELPIRLKHGGRIGVADTMAGPMAR 86 >gi|312622112|ref|YP_004023725.1| phosphoribosyltransferase [Caldicellulosiruptor kronotskyensis 2002] gi|312202579|gb|ADQ45906.1| phosphoribosyltransferase [Caldicellulosiruptor kronotskyensis 2002] Length = 231 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69 + +L +P C R+ C C I FI+ D+ Sbjct: 1 MEKLIEFFFPPRCAFCGRLGKSP---CDDCKKNIRFISGNTCQKCGIPIGDSDLPVCSSC 57 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++++ ++ V Y + V L KY Sbjct: 58 LRENFAFEKVFPVFYYEGVVRRGVHLFKYR 87 >gi|222529664|ref|YP_002573546.1| phosphoribosyltransferase [Caldicellulosiruptor bescii DSM 6725] gi|222456511|gb|ACM60773.1| phosphoribosyltransferase [Caldicellulosiruptor bescii DSM 6725] Length = 231 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 5/90 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69 + +L +P C ++ LC C I FI+ D+ Sbjct: 1 MEKLIEFFFPPRCAFCGKLGKS---LCDDCKKNIRFISGNTCQKCGIPIGDSDLPFCPSC 57 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++++ ++ V Y + V L KY Sbjct: 58 LRENFAFEKVFPVFYYEGVVRRGVHLFKYR 87 >gi|56475996|ref|YP_157585.1| hypothetical protein ebA1065 [Aromatoleum aromaticum EbN1] gi|56312039|emb|CAI06684.1| conserved hypothetical protein,predicted phosphoribosyltransferase family [Aromatoleum aromaticum EbN1] Length = 236 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 2/110 (1%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 M ++ ++ + + P C + + + LC C + + + Sbjct: 1 MSNVLDALRFRARRIADLLMPQECFVCGSM-SGAAALCSACRNDLP-RQPASCPVCAVPT 58 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + R+ Y +V+ LKY R LA A+ Sbjct: 59 VEGATCGRCLHNPPAFDASRAAFAYAFPVDRIVQGLKYRHRLALANFFAE 108 >gi|225164226|ref|ZP_03726500.1| competence protein F, putative [Opitutaceae bacterium TAV2] gi|224801165|gb|EEG19487.1| competence protein F, putative [Opitutaceae bacterium TAV2] Length = 257 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 29/105 (27%), Gaps = 13/105 (12%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC---------LCGHCWSKIHFITATEHILKNN 58 ++ ++ L ++P C ++ +C C I + + Sbjct: 4 LRRLVRGLVDVVFPPRCVHCHGLVEHSSAPDASQPLRHVCLKCAPFIRRVQPPHCTTCGH 63 Query: 59 KDNIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + R+ L+ + LV LKY Sbjct: 64 PFFGEVEGEHICEHCEGLHPEFNAGRTAVLFRGPARSLVHELKYQ 108 >gi|302391038|ref|YP_003826858.1| phosphoribosyltransferase [Acetohalobium arabaticum DSM 5501] gi|302203115|gb|ADL11793.1| phosphoribosyltransferase [Acetohalobium arabaticum DSM 5501] Length = 238 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 4/100 (4%) Query: 15 LFHCIYP--SICPIYSR--IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + +YP + C +++ + LC C +I +IT + + Sbjct: 1 MLDLVYPEPAKCLYCDEDNLVSDQIQLCRDCLERIDYITDNYCSKCGKLLDEGPECSTCQ 60 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + Q R+ LY + KY LA + + Sbjct: 61 EHKYYFDQARAAALYSGGLVDYIHQFKYQGEQILAKPLGR 100 >gi|226324394|ref|ZP_03799912.1| hypothetical protein COPCOM_02175 [Coprococcus comes ATCC 27758] gi|225206842|gb|EEG89196.1| hypothetical protein COPCOM_02175 [Coprococcus comes ATCC 27758] Length = 246 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 9/103 (8%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINL-------RFCLCGHCWSKIHFITATEHILKNNK- 59 +K + + IYPS CP I++ +C C K+ +I + Sbjct: 4 LKKVKETILELIYPSKCPFCGEIVSAGKKHSMEHNGICKACREKLPYIGEVRCMCCGKPL 63 Query: 60 -DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101 D ++ ++ RS+ ++ D V +KY +R Sbjct: 64 TDPAEEYCYDCTRQKHLFVDGRSLWVHKDAVENAVYAMKYQNR 106 >gi|116751311|ref|YP_847998.1| phosphoribosyltransferase [Syntrophobacter fumaroxidans MPOB] gi|116700375|gb|ABK19563.1| phosphoribosyltransferase [Syntrophobacter fumaroxidans MPOB] Length = 259 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 7/93 (7%) Query: 21 PSICPIYSR--IINLRFCLCGHCWSKIHFITATEHI-----LKNNKDNIDKDPLKSMQKD 73 P C + + C C +++ +IT + + D + Sbjct: 19 PRRCAGCRNTWLRSQEGFWCERCRAELPWITHPLCPRCGRPYPGSPASPDHRCGDCLLGA 78 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAI 106 P RS TLY + + LK+ + + A Sbjct: 79 YPFDSARSATLYTGVVRDRIHQLKFGCQVEWAP 111 >gi|218960908|ref|YP_001740683.1| putative gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Candidatus Cloacamonas acidaminovorans] gi|167729565|emb|CAO80477.1| putative gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Candidatus Cloacamonas acidaminovorans] Length = 240 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 2/85 (2%) Query: 15 LFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 + + P C + RI + +C C +K++ I + +++ + + + Sbjct: 16 ILELLIPPACLVCGNRIDDRYQVICPDCEAKLYLIGEGTCPVCGSENK-ELPCEVCAEGN 74 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKY 98 SV Y L+ +LKY Sbjct: 75 FAFDSAISVFRYSGPVRDLIHILKY 99 >gi|253579910|ref|ZP_04857178.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848909|gb|EES76871.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 234 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 1/112 (0%) Query: 8 VKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 +K + + YP CP+ +I+ + R +C C ++ I + Sbjct: 1 MKRFLNMVADIFYPRCCPVCQKILADQRRMICPECEKELRPIGHPRCYKCGKPIETGEYC 60 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + Q R + +Y + V KY+ + A+ M+R +K Sbjct: 61 RDCQKHRHMYEQGRGIFVYDGIMRRSVTRYKYYGCREYGDFYARAMYRYAQK 112 >gi|291561987|emb|CBL40798.1| Predicted amidophosphoribosyltransferases [butyrate-producing bacterium SS3/4] Length = 236 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 3/88 (3%) Query: 14 ELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSM 70 E+ +YP CP+ I +C C K+ F+ + K +D + M Sbjct: 5 EILDVLYPRRCPVCGDITGGSGRMICPDCLRKLSFVKSPVCKKCGKEIEDESMEFCPDCM 64 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + ++ Y + + + +KY Sbjct: 65 RHPRAFEYGIALLNYDEAARHSMAQIKY 92 >gi|312135429|ref|YP_004002767.1| phosphoribosyltransferase [Caldicellulosiruptor owensensis OL] gi|311775480|gb|ADQ04967.1| phosphoribosyltransferase [Caldicellulosiruptor owensensis OL] Length = 231 Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 5/90 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69 + +L +P C R+ C C I FI+ D Sbjct: 1 MEKLIEFFFPPRCAFCGRLGKSP---CDDCKKNIRFISGNTCQKCGIPIGDTALPFYPSC 57 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++++ ++ V Y + V L KY Sbjct: 58 LRENFAFERVFPVFYYEGVIRRGVHLFKYR 87 >gi|312793874|ref|YP_004026797.1| phosphoribosyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181014|gb|ADQ41184.1| phosphoribosyltransferase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 231 Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 9/111 (8%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69 + ++ +P C R+ C +C I FI+ D Sbjct: 1 MEKIIEFFFPPRCAFCGRLGKSP---CDNCKKNIKFISGNTCQKCGIPIGDTTLLFCPSC 57 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLK----YHDRTDLAIMMAQWMFRVL 116 ++++ ++ V Y + V L K Y + + +MA+ + Sbjct: 58 LRENFAFERVFPVFYYEGVVRRGVHLFKYRGFYQNAITFSRLMAKKIIEAG 108 >gi|220932484|ref|YP_002509392.1| amidophosphoribosyltransferase [Halothermothrix orenii H 168] gi|219993794|gb|ACL70397.1| amidophosphoribosyltransferase [Halothermothrix orenii H 168] Length = 243 Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 5/103 (4%) Query: 11 IIIELFHCIYPSI--CPIYSR---IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 II IYP C + R I + LC C S IHFIT + ++ Sbjct: 3 IIEFFLDIIYPPENHCLVCGRKLTIFSELTGLCQECLSNIHFITESCSRCGREVEDKRNI 62 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM 108 + I S Y ++ ++ K+ R +L + Sbjct: 63 CSYCKTFEPAYDFIHSGASYDGITRQMLLEFKFKQRKELKKPL 105 >gi|312877563|ref|ZP_07737522.1| phosphoribosyltransferase [Caldicellulosiruptor lactoaceticus 6A] gi|311795638|gb|EFR12008.1| phosphoribosyltransferase [Caldicellulosiruptor lactoaceticus 6A] Length = 231 Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 5/90 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69 + ++ +P C R+ C +C I FI+ D Sbjct: 1 MEKIIEFFFPPRCAFCGRLGKSP---CDNCKKNIKFISGNTCQKCGIPIGDTTLLFCPSC 57 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++++ ++ V Y + V L KY Sbjct: 58 LRENFAFERVFPVFYYEGVVRRGVHLFKYR 87 >gi|281356590|ref|ZP_06243081.1| phosphoribosyltransferase [Victivallis vadensis ATCC BAA-548] gi|281316717|gb|EFB00740.1| phosphoribosyltransferase [Victivallis vadensis ATCC BAA-548] Length = 238 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 11/106 (10%) Query: 19 IYPSICPIYSRIINLRFC----LCGHCWSKIHFITATEHILKNNK-DNIDKDPLKSMQKD 73 ++P CP+ +C C + D + K + ++ Sbjct: 14 LFP--CPLCR---TGDGGGRNRICPECRKEFRVFEEPFCPGCGGTLDGLMAVCGKCLAEE 68 Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 P R++ Y + ++ K+ R +LA + + L+ Sbjct: 69 KRPWVGARTLFEYRGAARRMLHEFKFGGRPELARPLGELAAEALQG 114 >gi|301059590|ref|ZP_07200502.1| ComF family protein [delta proteobacterium NaphS2] gi|300446355|gb|EFK10208.1| ComF family protein [delta proteobacterium NaphS2] Length = 246 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 12/114 (10%) Query: 12 IIELFHCIYPSICPIYSRII--------NLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 + +L H IYP C + + + ++ +C C + I A + N D Sbjct: 4 LNQLAHIIYPPRCILCNDFLWRAPFDAGDVSSSVCQSCLRGFNAIEAPFCTICGKPFNSD 63 Query: 64 K----DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 ++ + Y V LKY +T +A M ++ Sbjct: 64 AIENHPCEDCLRTPPYFQAAYAPYRYEGPILEAVLKLKYGGKTFVADAMGPYLA 117 >gi|73666726|ref|YP_302742.1| competence protein F [Ehrlichia canis str. Jake] gi|72393867|gb|AAZ68144.1| competence protein F [Ehrlichia canis str. Jake] Length = 230 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 3/104 (2%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN--NKDNIDKDPLK 68 ++ ++ + I+P C + LC C + I F+ I D + K Sbjct: 1 MLGKIINIIFPRTCANCECTVPHYLDLCSICKNGIDFLHDNYCIGCGCRLPDGLSI-CGK 59 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 T++ SV Y S ++ LK+ D T +WM Sbjct: 60 CTVAPPKFTKLESVFSYNQYSKNMILNLKFFDNTLHIKTYGKWM 103 >gi|163742650|ref|ZP_02150036.1| competence protein F, putative [Phaeobacter gallaeciensis 2.10] gi|161384235|gb|EDQ08618.1| competence protein F, putative [Phaeobacter gallaeciensis 2.10] Length = 174 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 17/35 (48%) Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 M P Q R+ Y + L+ LK+ DRT++ Sbjct: 1 MAHPRPWQQGRAALSYEGTARRLILALKHGDRTEI 35 >gi|302384834|ref|YP_003820656.1| phosphoribosyltransferase [Clostridium saccharolyticum WM1] gi|302195462|gb|ADL03033.1| phosphoribosyltransferase [Clostridium saccharolyticum WM1] Length = 236 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 5/88 (5%) Query: 15 LFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKD---PLKSM 70 ++P CP+ I+ + L C C +K+ F+ K K+ I L + Sbjct: 6 FIDFLFPRRCPVCDGIVMPKGGLICPPCVAKLSFV-RDPVCKKCGKEIISPHMEYCLDCI 64 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + R++ Y D + + +KY Sbjct: 65 RHKRTFEYGRALMNYDDKAGNSIARIKY 92 >gi|323703018|ref|ZP_08114674.1| phosphoribosyltransferase [Desulfotomaculum nigrificans DSM 574] gi|323532031|gb|EGB21914.1| phosphoribosyltransferase [Desulfotomaculum nigrificans DSM 574] Length = 253 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 12/118 (10%) Query: 8 VKSIIIELFHCIYP--SICPIYSRIINLRFCLCGHC------WSKIHFITATEHILKNNK 59 + ++ LF+ I+P C + +CGHC W+ Sbjct: 1 MHPLLEALFNLIFPTRPGCQLCGGP--GAEAVCGHCQEWLARWAGQP--KCLVCGRPLTG 56 Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + + ++ P R+ Y V LKY + LA ++A+ M + ++ Sbjct: 57 RDRGPKCRECYRQRPPFVLARAAGPYEGPLKQAVHRLKYFGQKSLAPVLAELMLQAIQ 114 >gi|266620741|ref|ZP_06113676.1| putative competence protein [Clostridium hathewayi DSM 13479] gi|288867642|gb|EFC99940.1| putative competence protein [Clostridium hathewayi DSM 13479] Length = 244 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Query: 15 LFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQ 71 L ++P CP+ I+ R L C C K+ F+ K + L + Sbjct: 14 LTDLLFPRRCPVCGDIVLPRGELICPACVKKLSFVKQPVCKKCGKEISSAEREYCLDCTK 73 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 R++ Y D + + +KY +R + Sbjct: 74 HKRSFDYGRALLNYNDTAKKSMADIKYRNRRE 105 >gi|114332104|ref|YP_748326.1| hypothetical protein Neut_2139 [Nitrosomonas eutropha C91] gi|114309118|gb|ABI60361.1| conserved hypothetical protein [Nitrosomonas eutropha C91] Length = 236 Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 2/86 (2%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + ++ +C C + ++ + ++K +R+ Sbjct: 24 CVLCQ--VSDHRDICAACLHDLPRLSQVHCPSCLLPVPSSQICGACLRKPPAWNHVRAAV 81 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMA 109 Y L++ LKY LA ++A Sbjct: 82 RYTYPVDALIQALKYRSELSLAPILA 107 >gi|46445939|ref|YP_007304.1| putative competence-related protein comF [Candidatus Protochlamydia amoebophila UWE25] gi|46399580|emb|CAF23029.1| putative competence-related protein comF [Candidatus Protochlamydia amoebophila UWE25] Length = 241 Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 4/101 (3%) Query: 13 IELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFI---TATEHILKNNKDNIDKDPLK 68 H ++P+ C + + C C S + I + + Sbjct: 9 KSWIHFVFPATCLYCKESLQPSQAVFCYACASLLELINPQERCPICFDLKNNTFVHKCER 68 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + S Y + LV+ LKY ++ LA MA Sbjct: 69 CKAFPSLFLRQASAFDYFGPAQTLVKQLKYGNQPHLAKGMA 109 >gi|229586890|ref|YP_002845391.1| Competence protein F [Rickettsia africae ESF-5] gi|228021940|gb|ACP53648.1| Competence protein F [Rickettsia africae ESF-5] Length = 115 Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 27/88 (30%), Gaps = 5/88 (5%) Query: 27 YSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSMQKDLPLTQIRSV 82 C CW K+ FI + + +I + RS+ Sbjct: 5 CGN-TRGSGEFCSDCWKKLEFIARPYCSICGQRFSIKILDNCICGNCYSNKPNYEFARSL 63 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + S +V KY D+T A A+ Sbjct: 64 FKCNEHSKKIVHQFKYQDKTIFAKTFAK 91 >gi|58616813|ref|YP_196012.1| putative competence protein F (DNA transformation protein comF) [Ehrlichia ruminantium str. Gardel] gi|58416425|emb|CAI27538.1| Similar to competence protein F (DNA transformation protein comF) [Ehrlichia ruminantium str. Gardel] Length = 230 Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 1/103 (0%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKS 69 + ++ I+P C II LC C + I F+ I K + K Sbjct: 1 MFSKIISHIFPKTCAGCECIIPECCDLCSTCSNNIDFLYGNYCISCGFKLSEGISICGKC 60 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + T++ S+ Y S ++ K+ D T A+WM Sbjct: 61 IANKPMFTKLESIFSYDKYSKNIILNFKFFDNTLHIKTYAKWM 103 >gi|167644905|ref|YP_001682568.1| phosphoribosyltransferase [Caulobacter sp. K31] gi|167347335|gb|ABZ70070.1| phosphoribosyltransferase [Caulobacter sp. K31] Length = 215 Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 3/84 (3%) Query: 39 GHCWSKIHFITATEHILKNNKDNIDKD---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95 WS+I F+ D + + + R+ LY + S L+ Sbjct: 3 AAAWSRITFVDGPVCDGCGAPFAYDAGEIRCVLCQTRPRAFARARAACLYDEHSRDLILK 62 Query: 96 LKYHDRTDLAIMMAQWMFRVLEKI 119 LK+ DRTDL+ + A+W+ R + Sbjct: 63 LKHADRTDLSGLFARWLSRSAADL 86 >gi|331090560|ref|ZP_08339412.1| hypothetical protein HMPREF9477_00055 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403124|gb|EGG82686.1| hypothetical protein HMPREF9477_00055 [Lachnospiraceae bacterium 2_1_46FAA] Length = 231 Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 4/93 (4%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLK 68 +I + +YP +C +I +C C K+ I +++ Sbjct: 1 MIKRILEWLYPPVCVFCGKICEQ--GICAECRKKVGIIGEPRCKKCGKPIRLEEAELCYD 58 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101 +++L Q RS+ L+ + KY +R Sbjct: 59 CEREELDYEQGRSLWLHKMPVSSSIYAFKYKNR 91 >gi|149197780|ref|ZP_01874829.1| predicted amidophosphoribosyltransferase [Lentisphaera araneosa HTCC2155] gi|149139001|gb|EDM27405.1| predicted amidophosphoribosyltransferase [Lentisphaera araneosa HTCC2155] Length = 227 Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 2/92 (2%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFI--TATEHILKNNKDNIDKDPLKSMQK 72 + + IYP +C LC C K+ +I T D + ++ Sbjct: 1 MLNYIYPDVCVCCEAPTPPESPLCETCTKKLSYIDHENTCSSCHGLNDTATRLCSNCLKT 60 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 + S + ++ L+ KY L Sbjct: 61 PPKWSHSTSAFAFEGLARELILRFKYSRHLYL 92 >gi|332798810|ref|YP_004460309.1| phosphoribosyltransferase [Tepidanaerobacter sp. Re1] gi|332696545|gb|AEE91002.1| phosphoribosyltransferase [Tepidanaerobacter sp. Re1] Length = 238 Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 4/109 (3%) Query: 15 LFHCIYP--SICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKSM 70 ++P C + ++ N +C +C SKI +T + Sbjct: 11 FLDILFPQKPYCLLCGNKLANTESIICENCKSKIEPLTGSLCGKCGKPLKTGLLFCNDCQ 70 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + Q RS Y L+ KY+ R +LA ++ Q MF +L+++ Sbjct: 71 NEHHAFVQARSYGRYEGTLKQLIYEFKYNGRQELAEILGQMMFSLLKEL 119 >gi|34581516|ref|ZP_00142996.1| hypothetical competence protein F [Rickettsia sibirica 246] gi|28262901|gb|EAA26405.1| hypothetical competence protein F [Rickettsia sibirica 246] Length = 111 Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 5/83 (6%) Query: 27 YSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSMQKDLPLTQIRSV 82 C CW K+ FI + + +I + RS+ Sbjct: 5 CGN-TRGSGEFCSDCWKKLEFIARPYCSICGQRFSIKILDNCICGNCYSNKPNYEFARSL 63 Query: 83 TLYCDMSCVLVRLLKYHDRTDLA 105 + S +V KY D+T A Sbjct: 64 FKCNEHSKKIVHQFKYQDKTIFA 86 >gi|57238824|ref|YP_179960.1| putative competence protein F (DNA transformation protein comF) [Ehrlichia ruminantium str. Welgevonden] gi|58578754|ref|YP_196966.1| putative competence protein F (DNA transformation protein comF) [Ehrlichia ruminantium str. Welgevonden] gi|57160903|emb|CAH57808.1| putative competence protein F [Ehrlichia ruminantium str. Welgevonden] gi|58417380|emb|CAI26584.1| Similar to competence protein F (DNA transformation protein comF) [Ehrlichia ruminantium str. Welgevonden] Length = 230 Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKS 69 + ++ + I+P C II LC C + I F+ I K + K Sbjct: 1 MFSKIINHIFPKTCAGCECIIPECCDLCSICSNNIDFLHGNYCISCGFKLSEGISICGKC 60 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + T++ S+ Y S ++ K+ D T A+WM Sbjct: 61 IANKPMFTKLESIFSYDKYSKNIILNFKFFDNTLHIKTYAKWM 103 >gi|51244132|ref|YP_064016.1| competence protein F [Desulfotalea psychrophila LSv54] gi|50875169|emb|CAG35009.1| related to competence protein F [Desulfotalea psychrophila LSv54] Length = 238 Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 10/98 (10%) Query: 15 LFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----PL 67 L ++P C I +R LC C KI T L + Sbjct: 4 LLDLLFPRSCVYCEERIPYGIRETLCPACLQKIK-PTRPPLCLCCGGPLVGPVETEHLCG 62 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 + + RS+ +Y D+ L+ LK+ D+A Sbjct: 63 TCLLHMPAYNRARSLFIYEDVVRGLIHGLKFG--QDMA 98 >gi|315651636|ref|ZP_07904647.1| competence protein F [Eubacterium saburreum DSM 3986] gi|315486090|gb|EFU76461.1| competence protein F [Eubacterium saburreum DSM 3986] Length = 247 Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKD-- 65 K+I ++ ++P CP+ I+ + L C C + F+ + I + D Sbjct: 12 KAIGDKIIDAVFPRRCPVCGEIVREKGHLICKSCIGGLPFVKSPYCIRCGKEIISSDDAY 71 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 + + R++ Y D ++ +KY ++ + Sbjct: 72 CDDC-KCEREFVSGRALCNYTDNMAHIILKIKYGNKRE 108 >gi|187735075|ref|YP_001877187.1| competence protein F, [Akkermansia muciniphila ATCC BAA-835] gi|187425127|gb|ACD04406.1| competence protein F, putative [Akkermansia muciniphila ATCC BAA-835] Length = 249 Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 6/116 (5%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNK----DNI 62 ++S++ E +YP +C + R L C +C C + + Sbjct: 2 LRSVVREWLSWVYPFVCELCGRG-GLDGCHVCPDCRGSFVPVEPPFCAVCGEPAEGSFIP 60 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + + R+V + L+ KY LA AQ M + Sbjct: 61 SGLCRRCAVALPSFEEARAVYVNTGSLRDLLLAFKYGGAVHLAGSFAQMMAEAVRG 116 >gi|225376976|ref|ZP_03754197.1| hypothetical protein ROSEINA2194_02618 [Roseburia inulinivorans DSM 16841] gi|225211297|gb|EEG93651.1| hypothetical protein ROSEINA2194_02618 [Roseburia inulinivorans DSM 16841] Length = 247 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 10/110 (9%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQK 72 L + ++P CP+ +I + C C K+ I K +D + M+K Sbjct: 18 LSNIVFPPRCPVCDEVIYVGKDTCEDCRKKVICIGEPSCKKCGKPLEDQRREYCTDCMRK 77 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ--------WMFR 114 +Q ++V +Y + KY ++ + A A+ W+ R Sbjct: 78 KHYFSQGKAVFVYQGEIRQSMYRFKYSNKREYADFYAKEAVRIYGDWIRR 127 >gi|20806995|ref|NP_622166.1| amidophosphoribosyltransferase [Thermoanaerobacter tengcongensis MB4] gi|254478842|ref|ZP_05092207.1| Phosphoribosyl transferase domain protein [Carboxydibrachium pacificum DSM 12653] gi|20515478|gb|AAM23770.1| predicted amidophosphoribosyltransferases [Thermoanaerobacter tengcongensis MB4] gi|214035204|gb|EEB75913.1| Phosphoribosyl transferase domain protein [Carboxydibrachium pacificum DSM 12653] Length = 228 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 3/108 (2%) Query: 14 ELFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 ++P C + + I LC C + + I + + ++ Sbjct: 2 TFLDLLFPPKTSCIVCNASI-KSGYLCDRCKASLEIINGKRCRICGKPLKEGEICSDCLK 60 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Q S Y + L+ KY + LA A +M ++ + Sbjct: 61 TPHYFKQNVSPFEYEGVVKELIGKFKYFNERHLASFFADYMADAVKNM 108 >gi|320352701|ref|YP_004194040.1| phosphoribosyltransferase [Desulfobulbus propionicus DSM 2032] gi|320121203|gb|ADW16749.1| phosphoribosyltransferase [Desulfobulbus propionicus DSM 2032] Length = 239 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 4/93 (4%) Query: 10 SIIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 S L ++P C R + + LCG C + I++ D Sbjct: 3 SYFKALQDLLFPPACLGCERRLDSSQPPLLCGDCLGALAEISSPVCPGCGLPFANGADHL 62 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + R++ +Y L+ LK+ Sbjct: 63 CGDCLTGCYAFDLARALFVYQPPVSALILGLKF 95 >gi|270308613|ref|YP_003330671.1| ComF [Dehalococcoides sp. VS] gi|270154505|gb|ACZ62343.1| ComF [Dehalococcoides sp. VS] Length = 233 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 5/106 (4%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +S+ L ++P C + + L C C + +IT L + D Sbjct: 6 QSLKDTLLDLVFPQQCLVCGK----EGKLFCAKCGGSLSYITPPVCTLCGHHTGDDGVCP 61 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + M + L +RSV + + LKYH+ +A ++ ++ Sbjct: 62 QCMSGKIHLDGLRSVFNFEGGIAQAIYALKYHNLRSVAPLLGTFLA 107 >gi|254973792|ref|ZP_05270264.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile QCD-66c26] gi|255091181|ref|ZP_05320659.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile CIP 107932] gi|255099293|ref|ZP_05328270.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile QCD-63q42] gi|255305079|ref|ZP_05349251.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile ATCC 43255] gi|255312836|ref|ZP_05354419.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile QCD-76w55] gi|255515595|ref|ZP_05383271.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile QCD-97b34] gi|255648689|ref|ZP_05395591.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile QCD-37x79] gi|260681911|ref|YP_003213196.1| putative phosphoribosyl transferase [Clostridium difficile CD196] gi|260685509|ref|YP_003216642.1| putative phosphoribosyl transferase [Clostridium difficile R20291] gi|306518810|ref|ZP_07405157.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile QCD-32g58] gi|260208074|emb|CBA60305.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile CD196] gi|260211525|emb|CBE01691.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile R20291] Length = 260 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 10/118 (8%) Query: 5 IQTVKSIIIELFHCIYPS--ICPIYSRIINLRFC--LCGHCWSKIHFIT------ATEHI 54 I+ K++I + IYP C I + I +C C+ +++FI I Sbjct: 9 IKNFKNMINKCLDFIYPENISCIICDKSIKKTNTYSICKSCFKEMNFIQDGCMKCGKPII 68 Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + + ++ KD + S Y D++ +V LKY+ +T +A +AQ M Sbjct: 69 RHSIEKEFIEECSYCFNKDFYFDKSISCIEYNDVTKKMVLGLKYNQKTFMAKYIAQIM 126 >gi|323698874|ref|ZP_08110786.1| phosphoribosyltransferase [Desulfovibrio sp. ND132] gi|323458806|gb|EGB14671.1| phosphoribosyltransferase [Desulfovibrio desulfuricans ND132] Length = 246 Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 5/86 (5%) Query: 23 ICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPLT 77 CP+ S + + LC C ++ T ++D + P Sbjct: 18 RCPVCASVMADGSRTLCPACAGELPLRTGGLCPACGGMSGREEDPPTLCPECRLDPPPWD 77 Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTD 103 ++ Y + L+ K+ DR D Sbjct: 78 RLYFHGRYTGLLRELILGYKFRDRFD 103 >gi|239623234|ref|ZP_04666265.1| amidophosphoribosyltransferase [Clostridiales bacterium 1_7_47_FAA] gi|239522200|gb|EEQ62066.1| amidophosphoribosyltransferase [Clostridiales bacterium 1_7_47FAA] Length = 241 Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 3/107 (2%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNID--KDPL 67 I L ++P CP+ +RI+ R L C C K+ ++ + D + Sbjct: 7 ITSHLLDLLFPRRCPVCARIVMPRGNLICPECMKKLSWVHRPTCKKCGKEVLSDTIEYCY 66 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + S+ Y D++ + +KY+++ + ++ MFR Sbjct: 67 DCTKHRRSFDYGLSLVNYDDIASKSMAQIKYNNKREYLDFYSEAMFR 113 >gi|108804459|ref|YP_644396.1| phosphoribosyltransferase [Rubrobacter xylanophilus DSM 9941] gi|108765702|gb|ABG04584.1| phosphoribosyltransferase [Rubrobacter xylanophilus DSM 9941] Length = 227 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 31/111 (27%), Gaps = 4/111 (3%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHI-LKNNKDNIDKDPLK 68 + L +P C + LCG C + + Sbjct: 4 PYLAALLDLFFPQRCAGCRSRASD--VLCGGCAENLPLLEPPLCARCGMPAPFEVPACSG 61 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA-IMMAQWMFRVLEK 118 DL R+ Y + V LKY +A + A + RVL + Sbjct: 62 CRGVDLWFEGFRAPLRYEGVGREAVHALKYGGHARVAERLAAPLLARVLPE 112 >gi|288940276|ref|YP_003442516.1| phosphoribosyltransferase [Allochromatium vinosum DSM 180] gi|288895648|gb|ADC61484.1| phosphoribosyltransferase [Allochromatium vinosum DSM 180] Length = 238 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 31/112 (27%), Gaps = 9/112 (8%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT------EHILKNNKDNIDKDP 66 L ++P C + LC C + + ++ I Sbjct: 10 RSLLDSLFPPTCLLCGAPGEQGRDLCAGCALDLPYNLRACARCARPFLVPLPDGAI---C 66 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 ++ P + Y L+ K+ R + A ++ Q + + Sbjct: 67 GDCERRPPPFDACLTAFRYEGAVPFLITGAKFRGRLNAARLLGQCLAEQARE 118 >gi|73749136|ref|YP_308375.1| putative comF family protein [Dehalococcoides sp. CBDB1] gi|147669898|ref|YP_001214716.1| amidophosphoribosyltransferase-like protein [Dehalococcoides sp. BAV1] gi|289433110|ref|YP_003462983.1| phosphoribosyltransferase [Dehalococcoides sp. GT] gi|73660852|emb|CAI83459.1| putative comF family protein [Dehalococcoides sp. CBDB1] gi|146270846|gb|ABQ17838.1| amidophosphoribosyltransferase-like protein [Dehalococcoides sp. BAV1] gi|288946830|gb|ADC74527.1| phosphoribosyltransferase [Dehalococcoides sp. GT] Length = 233 Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 5/106 (4%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +S L ++P C + + L C C + + +I+ L + + D Sbjct: 6 QSFKDTLLDLVFPQQCLVCGK----EGKLFCAKCRAGLSYISPPVCSLCGHHISNDGVCP 61 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + L +RSV + + LKYH+ +A ++ +M Sbjct: 62 MCLSGKIHLDGLRSVFNFEGGIAQAIYSLKYHNLRSVAPLLGTFMA 107 >gi|30250228|ref|NP_842298.1| hypothetical protein NE2301 [Nitrosomonas europaea ATCC 19718] gi|30181023|emb|CAD86213.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 258 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 2/87 (2%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C + + + ++ + IR+ Sbjct: 24 CVLCQAPNHQD--ICNACLQDLPGLPPVHCPSCLLPMTSPEICGTCLRNPPAWSHIRAAL 81 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 Y + LV+ LKY LA ++A Sbjct: 82 RYTFPADALVQALKYRSDLPLAPILAG 108 >gi|291540633|emb|CBL13744.1| Predicted amidophosphoribosyltransferases [Roseburia intestinalis XB6B4] Length = 248 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65 + ++ ++ +YP C + I +C C K+H + K K +D+ Sbjct: 13 RKMLFQMLEILYPRRCAVCDEIEVTGKGICPLCKDKVH-VAGEPACKKCGKPLVDERKEF 71 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 +K TQ ++V +Y + KY ++ + A A Sbjct: 72 CTDCGKKHHVYTQGKAVFVYEGGIRNSMYRFKYGNKREYAEFYAN 116 >gi|240144754|ref|ZP_04743355.1| ComF family protein [Roseburia intestinalis L1-82] gi|257203275|gb|EEV01560.1| ComF family protein [Roseburia intestinalis L1-82] gi|291534616|emb|CBL07728.1| Predicted amidophosphoribosyltransferases [Roseburia intestinalis M50/1] Length = 248 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65 + ++ ++ +YP C + I +C C K+H + K K +D+ Sbjct: 13 RKMLFQMLEILYPRRCAVCDEIEVTGKGICPLCKDKVH-VAGEPACKKCGKPLVDERKEF 71 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 +K TQ ++V +Y + KY ++ + A A Sbjct: 72 CTDCGKKHHVYTQGKAVFVYEGGIRNSMYRFKYGNKREYAEFYAN 116 >gi|162455570|ref|YP_001617937.1| hypothetical protein sce7288 [Sorangium cellulosum 'So ce 56'] gi|161166152|emb|CAN97457.1| unnamed protein product [Sorangium cellulosum 'So ce 56'] Length = 246 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 30/116 (25%), Gaps = 12/116 (10%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A+ V+S++ + P C I C C T Sbjct: 6 ALAAAVRSLVAAAARTLSPPACAGCDTPIADASVFCADC-------ARTSVPYAEGAPRG 58 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + L + + +R KY DR DLA + + M Sbjct: 59 GAGTRAAAGAPLV-----AFAPFGGAVAEGIRRFKYGDRPDLARPLGRLMLCAARD 109 >gi|255654224|ref|ZP_05399633.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile QCD-23m63] gi|296452508|ref|ZP_06894205.1| ComF family protein [Clostridium difficile NAP08] gi|296881080|ref|ZP_06905023.1| ComF family protein [Clostridium difficile NAP07] gi|296258613|gb|EFH05511.1| ComF family protein [Clostridium difficile NAP08] gi|296427946|gb|EFH13850.1| ComF family protein [Clostridium difficile NAP07] Length = 260 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 10/114 (8%) Query: 9 KSIIIELFHCIYPS--ICPIYSRIINLRFC--LCGHCWSKIHFIT------ATEHILKNN 58 K++I + IYP C I + I +C C+ +++FI I + Sbjct: 13 KNMINKCLDFIYPENISCIICDKSIKKTNTYSICKSCFKEMNFIQDGCMKCGKPIIHHSI 72 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + ++ KD + S Y D++ +V LKY+ +T +A +AQ M Sbjct: 73 EKEFIEECSYCFNKDFYFDKSISCIEYNDVTKKIVLGLKYNQKTFMAKYIAQIM 126 >gi|254281962|ref|ZP_04956930.1| ComF family protein [gamma proteobacterium NOR51-B] gi|219678165|gb|EED34514.1| ComF family protein [gamma proteobacterium NOR51-B] Length = 247 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 29/98 (29%), Gaps = 5/98 (5%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 +P+ + ++ +I + P IC + + + +C C + I Sbjct: 9 LPSTAKKLRQLIGQAL----PPICILCDQRHDEFTLVCQQCANGIQ-TNDNPCPGCAEPG 63 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + + + L+ LV K+ Sbjct: 64 VGAVHCGRCQTSPRSFDRATAPLLFEGPVRELVHRWKF 101 >gi|154484179|ref|ZP_02026627.1| hypothetical protein EUBVEN_01890 [Eubacterium ventriosum ATCC 27560] gi|149734656|gb|EDM50573.1| hypothetical protein EUBVEN_01890 [Eubacterium ventriosum ATCC 27560] Length = 235 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 2/102 (1%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLK 68 ++ + +YP++CP+ +++ +C C ++H I Sbjct: 1 MLGRVIEWMYPTVCPVCQKVLGKGKIICDTCKDELHIINEPRCAKCGKPLTDSGKTYCND 60 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + RSV Y +++ KY + D A+ Sbjct: 61 CKKMKHYYDRARSVFEYTGEMKLVLYRFKYGNSRDYGKFFAK 102 >gi|189485653|ref|YP_001956594.1| competence protein F [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287612|dbj|BAG14133.1| competence protein F [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 238 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 5/115 (4%) Query: 8 VKSIIIELFHCIYPSICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 +K + + + +P C + ++ + +C C I + Sbjct: 1 MKIFFLRIANFFHPVTCSVCGDDLSFLSQTKICDKCKESFPVIKNLLCQKCGMPLYDGGE 60 Query: 66 -PLKSMQKD--LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + ++RSV LY D L+ KY R+ LA +M+ ++ Sbjct: 61 YCCICKKHPKEYAFDKMRSVYLYKDSLRSLILKFKYSGRSFLARDFGLYMYEAMK 115 >gi|158521918|ref|YP_001529788.1| phosphoribosyltransferase [Desulfococcus oleovorans Hxd3] gi|158510744|gb|ABW67711.1| phosphoribosyltransferase [Desulfococcus oleovorans Hxd3] Length = 279 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 31/131 (23%), Gaps = 31/131 (23%) Query: 10 SIIIELFHCIYPSICPIYSRII---------------------NLRFC------LCGHCW 42 + + +YP C + F LC C Sbjct: 8 AAFRSIVDAVYPPACCACGGPVCRETSGAVLSETPPPGFIDDTENPFSHVMGPVLCDVCV 67 Query: 43 SKIHFITATEHILKN----NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 IT + ++D D + R+V Y V KY Sbjct: 68 KAFTPITPPFCPVCGNMFVSRDAEDHVCGACADFPRRFGRARAVGAYEASLMAAVHKFKY 127 Query: 99 HDRTDLAIMMA 109 RT LA + Sbjct: 128 AGRTGLAGPLG 138 >gi|225420377|ref|ZP_03762680.1| hypothetical protein CLOSTASPAR_06722 [Clostridium asparagiforme DSM 15981] gi|225040996|gb|EEG51242.1| hypothetical protein CLOSTASPAR_06722 [Clostridium asparagiforme DSM 15981] Length = 240 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 3/110 (2%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNID--K 64 +KS+ ++P CP+ RI+ R L C C +++ ++ + ++D + Sbjct: 3 LKSLTDCAIDALFPRRCPVCGRIVVPRGRLICPGCINRLSWVKQPVCKSCGKELSVDTVE 62 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 ++ R++ Y + + + +KY++R + A M R Sbjct: 63 YCFDCARRPHSFVYGRALINYNEAASRSMAQIKYNNRREYLDYYAGEMVR 112 >gi|294055502|ref|YP_003549160.1| phosphoribosyltransferase [Coraliomargarita akajimensis DSM 45221] gi|293614835|gb|ADE54990.1| phosphoribosyltransferase [Coraliomargarita akajimensis DSM 45221] Length = 240 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 27/96 (28%), Gaps = 6/96 (6%) Query: 10 SIIIELFHCIYPSICPIYSRIINL-RFC-LCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 I+ ++P C + F LCG C +I + + Sbjct: 4 PILKASLDLLFPRSCVNCGDCVEGSDFEFLCGDCSREIFWAHPPACSVCGYPFFGMLAGA 63 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + +++ L L+ LKY Sbjct: 64 RVCPHCAELTPQFDEGKTLFLAKGAGRTLLHELKYR 99 >gi|320161470|ref|YP_004174694.1| putative phosphoribosyltransferase [Anaerolinea thermophila UNI-1] gi|319995323|dbj|BAJ64094.1| putative phosphoribosyltransferase [Anaerolinea thermophila UNI-1] Length = 244 Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 29/97 (29%), Gaps = 3/97 (3%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 ++P C + C C KI + + ++ Sbjct: 13 TAVDWLFPPYCLDCGTLGERW---CETCQQKISLLAPPLCERCGRPVELAGLCVECQHAP 69 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + IRS Y + + LK+ LA ++A Sbjct: 70 ISMDAIRSCYAYEGIIREAIHRLKFEKDLGLAEILAN 106 >gi|83859693|ref|ZP_00953213.1| phosphoribosyltransferase [Oceanicaulis alexandrii HTCC2633] gi|83852052|gb|EAP89906.1| phosphoribosyltransferase [Oceanicaulis alexandrii HTCC2633] Length = 185 Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%) Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + Q + P R+ +Y + S LV +LK+ RTD + +WM R Sbjct: 6 AGQDNPPCRISRAAFVYDEKSRRLVLMLKHAGRTDGVSVFGRWMMRAGAD 55 >gi|94264829|ref|ZP_01288605.1| competence protein F-like protein [delta proteobacterium MLMS-1] gi|93454710|gb|EAT04971.1| competence protein F-like protein [delta proteobacterium MLMS-1] Length = 251 Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 14/108 (12%) Query: 10 SIIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 + + +P C + + C C + I F A Sbjct: 8 AWVRSCLDLFFPPHCLACRVALPSSQPPLFCAACRAAITFARAPLCSCCGRPLGSLPGLA 67 Query: 66 --------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 +QK ++ R+ LY +M ++ KYH DLA Sbjct: 68 PAVGDSHCCGACLQKPPFFSKARAAVLYDEMIGRALQGYKYHG--DLA 113 >gi|82702257|ref|YP_411823.1| phosphoribosyltransferase [Nitrosospira multiformis ATCC 25196] gi|82410322|gb|ABB74431.1| Phosphoribosyltransferase [Nitrosospira multiformis ATCC 25196] Length = 239 Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 2/95 (2%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 + ++ C + LC C + I+ + + + Sbjct: 16 IVQLLFGRNCFLCGSAATED--LCTPCRDSLPHISGPHCPVCALPMEEARVCGACLAHPP 73 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + Y L+ LKY LA ++A Sbjct: 74 AFDLTLAAVNYAFPIDALLHSLKYRTNLALAPVLA 108 >gi|332982900|ref|YP_004464341.1| phosphoribosyltransferase [Mahella australiensis 50-1 BON] gi|332700578|gb|AEE97519.1| phosphoribosyltransferase [Mahella australiensis 50-1 BON] Length = 243 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 6/113 (5%) Query: 9 KSIIIELFHCIYPS--ICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 +++I ++ IYP C ++ + + +C HCW + F + + DK Sbjct: 4 RTLIEDVCDIIYPPANTCIFCNQQGELIVPYSMCEHCWDTLPFTKPPLCDICGKPIDSDK 63 Query: 65 D--PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + +V Y + KY ++LA + M V Sbjct: 64 LRICHDCAEYSRSFVKAGAVLEYMPSVHETIYRYKYKGHSELAKPLGLLMAHV 116 >gi|300088792|ref|YP_003759314.1| phosphoribosyltransferase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528525|gb|ADJ26993.1| phosphoribosyltransferase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 230 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 6/100 (6%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 L + +P C R F C C + F + Sbjct: 11 RLLNFFFPRYCLGCGRE-GAYF--CQSCRRDLPFQLPPFCPRCGKGLDHHPSCDD---IA 64 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 LT + SV + + V KY++ DLA + ++ Sbjct: 65 PELTALHSVFRFEGVIKKAVHQFKYNNLRDLAGPLGGYLA 104 >gi|146296670|ref|YP_001180441.1| phosphoribosyltransferase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410246|gb|ABP67250.1| phosphoribosyltransferase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 232 Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 5/90 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69 + L +P C ++ + C C I FI D + Sbjct: 1 MERLIQFFFPRRCSFCGKVGDDP---CDECKKFIRFIQGKTCEKCGIPIGDFVYSLCPSC 57 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++ ++ V Y + V L KY Sbjct: 58 QRESFTFEKVLPVFYYEGIVRKGVHLFKYR 87 >gi|258517072|ref|YP_003193294.1| amidophosphoribosyltransferase [Desulfotomaculum acetoxidans DSM 771] gi|257780777|gb|ACV64671.1| amidophosphoribosyltransferase [Desulfotomaculum acetoxidans DSM 771] Length = 247 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 26/121 (21%) Query: 8 VKSIIIELFHCI--YPSICPIYSRIINLRFCLCGHCWSKIHFITATEH------------ 53 ++ +I L + +P +C + LC C + I + Sbjct: 2 LRKLIEGLTDLLLPHPPVCVLCGVRRKQVASLCPLC---RNMIESYRCEPVCKLCGRYLL 58 Query: 54 ILKNNKDNIDKDPLKSMQK-DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 +D + P RS Y + VR LKY++ A+WM Sbjct: 59 PYPGAEDIFSDRCPECSSGGSWPFAAARSAGAYEGLLKEAVRQLKYYN--------ARWM 110 Query: 113 F 113 Sbjct: 111 V 111 >gi|329928719|ref|ZP_08282568.1| comF family protein [Paenibacillus sp. HGF5] gi|328937500|gb|EGG33918.1| comF family protein [Paenibacillus sp. HGF5] Length = 286 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 6/117 (5%) Query: 4 IIQTVKSIIIELFHCIYP--SICPIYSRIINLRF---CLCGHCWSKIHFITATEHILKNN 58 I + ++ + + P IC +I + +C C+ +I +I + Sbjct: 2 ISNVLSQLLGHMHRLLKPMDEICLTCGKIGSCNQELPGICHACYRQIPWIFKPRCLRCGR 61 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 D + D RS Y + KY A ++ + M R Sbjct: 62 GIGC-PDCTRLGVNDRSFVSNRSAVTYDAQMREWLAQYKYRGNERYAPLLVEMMLRA 117 >gi|148266135|ref|YP_001232841.1| amidophosphoribosyltransferase-like protein [Geobacter uraniireducens Rf4] gi|146399635|gb|ABQ28268.1| amidophosphoribosyltransferase-like protein [Geobacter uraniireducens Rf4] Length = 238 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 6/105 (5%) Query: 11 IIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKD----NIDK 64 L ++P +C I I LC C K+ + + ++ ID Sbjct: 2 FFRALIDILFPPLCHICKTFIPDAGDIHLCAGCREKLIPLNSPLCLVCGVPFATENGIDH 61 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + R+ ++ LV KY + L + Sbjct: 62 LCGPCLSHPPAYAAARAALVFSGPVQDLVHRFKYGHKVHLCRPLG 106 >gi|15892767|ref|NP_360481.1| putative competence protein F [Rickettsia conorii str. Malish 7] gi|15619946|gb|AAL03382.1| competence protein F-like protein [Rickettsia conorii str. Malish 7] Length = 115 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 5/88 (5%) Query: 27 YSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSMQKDLPLTQIRSV 82 C CW K+ FI + + +I + RS+ Sbjct: 5 CGN-TRGSGEFCSGCWKKLEFIARPYCSICRQRFSIKILDNCICGNCYSNKPNYEFARSL 63 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + S +V KY D+T A + A+ Sbjct: 64 FKCNEHSKKIVHQFKYQDKTIFAKIFAK 91 >gi|153003135|ref|YP_001377460.1| phosphoribosyltransferase [Anaeromyxobacter sp. Fw109-5] gi|152026708|gb|ABS24476.1| phosphoribosyltransferase [Anaeromyxobacter sp. Fw109-5] Length = 245 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 26/98 (26%), Gaps = 3/98 (3%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQ 78 +YP C + C C + + + D Sbjct: 28 VYPPRCAACREGVASE-PFCPTCAEAVDPL--PAGCARCGMPGPDPLCGACRADPPAFDA 84 Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 IR+ L+ + KY R LA + W+ R Sbjct: 85 IRAGGLFGGPLADAIHAFKYGGRPALARPLGAWLARTA 122 >gi|297569953|ref|YP_003691297.1| phosphoribosyltransferase [Desulfurivibrio alkaliphilus AHT2] gi|296925868|gb|ADH86678.1| phosphoribosyltransferase [Desulfurivibrio alkaliphilus AHT2] Length = 255 Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 28/98 (28%), Gaps = 6/98 (6%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDNIDKD 65 +++ ++PS C + C C + ++ + Sbjct: 9 AQAVFAACQDILFPSSCLGCRAPLPASRLPLFCPPCRQQFQWLNSPLCPACGRPWPAGAG 68 Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 +QK + R+ +Y D ++ KY Sbjct: 69 EDHLCGPCLQKPPLFQRARAAVVYRDPVAAAIQACKYQ 106 >gi|57233732|ref|YP_182161.1| comF family protein, putative [Dehalococcoides ethenogenes 195] gi|57224180|gb|AAW39237.1| comF family protein, putative [Dehalococcoides ethenogenes 195] Length = 233 Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 5/106 (4%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +S+ L ++P C + + L C C + +IT L + D Sbjct: 6 QSLKDTLLDLVFPQQCLVCGK----EGKLFCARCSGSLSYITPPVCSLCGHHTGDDGVCP 61 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + L +RSV + + LKYH+ +A ++ ++ Sbjct: 62 MCLSGKVHLDGLRSVFNFEGGIAQAIYALKYHNLRSVAPLLGDFLA 107 >gi|160941942|ref|ZP_02089267.1| hypothetical protein CLOBOL_06836 [Clostridium bolteae ATCC BAA-613] gi|158435149|gb|EDP12916.1| hypothetical protein CLOBOL_06836 [Clostridium bolteae ATCC BAA-613] Length = 257 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 40/105 (38%), Gaps = 3/105 (2%) Query: 17 HCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQKD 73 ++P CP+ I+ + L C C +K+ ++ + + + + Sbjct: 29 DILFPRRCPVCGGIVLPKGDLICPGCMTKLSWVRRPVCKKCGKEVLDETIEYCYDCTRHK 88 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 S+ Y D + + +KY++R + ++ M R + K Sbjct: 89 RSFDYGLSLINYDDTASRSMARIKYNNRREYLDFYSEAMVRKMGK 133 >gi|71906257|ref|YP_283844.1| phosphoribosyltransferase [Dechloromonas aromatica RCB] gi|71845878|gb|AAZ45374.1| Phosphoribosyltransferase [Dechloromonas aromatica RCB] Length = 247 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 41/114 (35%), Gaps = 3/114 (2%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +K + +L + + P C + + LC C + + + L ++ + Sbjct: 19 LKGLARKLGNALLPGSCLLCGAN-SRDELLCPECNADLPGLPPQLCPLCADQTTHGERCG 77 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR--VLEKI 119 ++ + ++ Y ++ LKY + +A ++ + R ++ Sbjct: 78 ACLKDAPCFDRTIALFHYDFPLDRIIHALKYGHQLAVAPWCSRRLGRRIAANEL 131 >gi|282891900|ref|ZP_06300379.1| hypothetical protein pah_c200o055 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498160|gb|EFB40500.1| hypothetical protein pah_c200o055 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 252 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 6/112 (5%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKD- 65 +K + + IYP IC + L C C ++ I TE + D Sbjct: 1 MKKWVGNGLNLIYPPICLECEDSLQNSSSLFCDDCHEQLSLIDPTERCHYCFESKHDFRS 60 Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + + Y + LV+ LKY ++ LA ++ Sbjct: 61 GVSLCKRCSLHAPLFRGVGAAFDYEGPAATLVKHLKYLNKPYLAEGAGAFLA 112 >gi|225026860|ref|ZP_03716052.1| hypothetical protein EUBHAL_01114 [Eubacterium hallii DSM 3353] gi|224955867|gb|EEG37076.1| hypothetical protein EUBHAL_01114 [Eubacterium hallii DSM 3353] Length = 277 Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 2/104 (1%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNID 63 Q + II +L ++P CP+ +++ + C ++ I + K + Sbjct: 32 QAILWIIRQLLPFLFPRHCPLCDKLLPYGSFIHEECHRELPLIHSPVCMRCGKPVSSHTQ 91 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107 + + S+ LY + ++ KY +R LA Sbjct: 92 EYCYDCRAFPKSFQRGLSLFLYNKKTRPIMSAFKYQNRRGLADF 135 >gi|228473984|ref|ZP_04058725.1| phosphoribosyltransferases family protein [Capnocytophaga gingivalis ATCC 33624] gi|228274498|gb|EEK13339.1| phosphoribosyltransferases family protein [Capnocytophaga gingivalis ATCC 33624] Length = 233 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 13/107 (12%) Query: 10 SIIIELFHCIYPSICPIYSRIINL--RFCLCGHC---WSKIHFITATEHILKNNKDNIDK 64 SI ++ ++P C ++II F LC +C + HF T + K K Sbjct: 4 SIFKDIMAVLFPKYCLGCTQIIGDNLPF-LCVNCRHELRQTHFDTLPDSENPMIKKFWGK 62 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111 ++ L + +S L+ LKYH+R + + + QW Sbjct: 63 VSVEKAAALLYYEKG-------TVSQRLIHALKYHNREQVGLWLGQW 102 >gi|158321545|ref|YP_001514052.1| competence protein F, putative [Alkaliphilus oremlandii OhILAs] gi|158141744|gb|ABW20056.1| competence protein F, putative [Alkaliphilus oremlandii OhILAs] Length = 228 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 36/111 (32%), Gaps = 16/111 (14%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI--- 62 + + + L IYP + LC KI FI+ I + Sbjct: 5 KALGEYMEALLELIYPPVTME---------DLCTE---KIPFISDHSCIQCGRGLRMMED 52 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + M K+ + SV Y L+ KY RT + +M WM Sbjct: 53 GPKCQECMGKEYHFHRAISVVKYEGEMKDLIYAFKYAHRTYVGRVMG-WMM 102 >gi|255534812|ref|YP_003095183.1| competence protein [Flavobacteriaceae bacterium 3519-10] gi|255341008|gb|ACU07121.1| competence protein [Flavobacteriaceae bacterium 3519-10] Length = 228 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 L I+P+ C +RII+ +CG C+ +IHF T H + + ++ Sbjct: 15 LTDLIFPNRCLECNRIISADELVCGLCFDQIHF---THHHFD-ENNLLKEECAVLFPVQY 70 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111 ++ +S +V LKY R ++A W Sbjct: 71 AFALMK--FEEDSLSRKIVHQLKYGQREKAGKIIAGW 105 >gi|292490891|ref|YP_003526330.1| competence protein F [Nitrosococcus halophilus Nc4] gi|291579486|gb|ADE13943.1| competence protein F [Nitrosococcus halophilus Nc4] Length = 237 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 1/106 (0%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 + + + +YP +C + LC C + + + + + +I Sbjct: 2 TVNRASIWLETFWQRLYPPLCALCGAPGATGLDLCSRCRADLPPL-GSACLCCARPLSIP 60 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 Q+ P + S Y L+ LK+H + LA ++ Sbjct: 61 GICGACQQQAPPQDRTLSAFRYAPPLDHLILQLKFHGKLHLAQLLG 106 >gi|260429468|ref|ZP_05783445.1| competence protein F [Citreicella sp. SE45] gi|260420091|gb|EEX13344.1| competence protein F [Citreicella sp. SE45] Length = 162 Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 19/37 (51%) Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 LY D LV +LK+ DR D+A A WM R + Sbjct: 1 MLYRDNGRKLVLMLKHGDRHDIAGAAAVWMARKARAL 37 >gi|196230002|ref|ZP_03128865.1| competence protein F, putative [Chthoniobacter flavus Ellin428] gi|196225599|gb|EDY20106.1| competence protein F, putative [Chthoniobacter flavus Ellin428] Length = 243 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 29/110 (26%), Gaps = 4/110 (3%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLK 68 +YP C LC C ++ I A + + D + Sbjct: 12 QAFLDALYPPHCANCLADTPSGIHLCTKCAAQAPKIKAPFCSQCSQPFDGAIDDVFVCFQ 71 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + L + + + KY L +A W+ LE Sbjct: 72 CEGRKLHFDCAIAPYRSRGVVREFIHRFKYERHFYLRQPLANWLAEALED 121 >gi|213616166|ref|ZP_03371992.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 84 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 14/88 (15%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R LC C + + +QK P ++ SV Sbjct: 10 ICSVCARAVRQRVSLCPQC--------------GLPAGHPSLPCGRCLQKPPPWQRLVSV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + Y +LV LK+ R+++A +A+ Sbjct: 56 SDYTPPLSLLVHQLKFTRRSEIAAALAR 83 >gi|225873655|ref|YP_002755114.1| ComF family protein [Acidobacterium capsulatum ATCC 51196] gi|225792065|gb|ACO32155.1| ComF family protein [Acidobacterium capsulatum ATCC 51196] Length = 310 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 11/114 (9%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNN----- 58 T + L + PS C + + R +C CW+ + L Sbjct: 4 STAHDTVSNLSTVLLPSPCRLCGEPLQEMTRVPVCSSCWNHLPAQAGILCHLCGELLPHH 63 Query: 59 --KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD-LAIMMA 109 +N + + P Q + +Y L+ LLKY DR + +A +A Sbjct: 64 FSAENSEPHCPACAEAAPPFVQAVAHGVYEGGLRELLHLLKY-DRMEPIAPRLA 116 >gi|284046049|ref|YP_003396389.1| competence protein F [Conexibacter woesei DSM 14684] gi|283950270|gb|ADB53014.1| competence protein F [Conexibacter woesei DSM 14684] Length = 239 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 7/110 (6%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNK 59 +P ++ + EL + P C + LC C +++ ++ Sbjct: 8 LPDLLLRAR---DELLAAVVPPACASCGHVLARAHQLLCDRCRAELPWLGPARCGCCGLP 64 Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 +D + + Y + LV LK+ +A +MA Sbjct: 65 RPCGPP---CPARDAAFSAAWAPLAYDGTARRLVAALKFGGALPVAQLMA 111 >gi|115372528|ref|ZP_01459836.1| phosphoribosyltransferase [Stigmatella aurantiaca DW4/3-1] gi|115370490|gb|EAU69417.1| phosphoribosyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 251 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 10/99 (10%), Positives = 29/99 (29%), Gaps = 1/99 (1%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI-DK 64 Q + +YP C ++++ + C C + + + Sbjct: 15 QAATRTLRGWAELLYPPSCLACAQVLPTQSPFCETCDTALERLPPACCRTCAEPGAFPAS 74 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 + P +++ + ++ + KY D + Sbjct: 75 TCPRCHLHPPPFSRVWAPFIHEGPVSRAIHRYKYEDHPE 113 >gi|167763742|ref|ZP_02435869.1| hypothetical protein BACSTE_02122 [Bacteroides stercoris ATCC 43183] gi|167697858|gb|EDS14437.1| hypothetical protein BACSTE_02122 [Bacteroides stercoris ATCC 43183] Length = 239 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 11/111 (9%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 T+K+ ++ H +P C + + +C C + T++ L + Sbjct: 8 NTLKAWLLSFLHLFFPRQCVVCGTPLQEGEEAICLKCNMDLP---RTDYHLCADNPVERM 64 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 K PL + S Y S ++ LKY R DL M ++M Sbjct: 65 FWGKI-----PLERATSYFFYHKGSDFRRILHQLKYGGRKDLGETMGRFMA 110 >gi|91776533|ref|YP_546289.1| hypothetical protein Mfla_2181 [Methylobacillus flagellatus KT] gi|91710520|gb|ABE50448.1| conserved hypothetical protein [Methylobacillus flagellatus KT] Length = 227 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 27/95 (28%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 L ++P C + S LC C + + T + +Q Sbjct: 4 LIERLFPQSCLLCSSWRAGSLGLCHDCLHDMPWHTDHACPQCALPSGNSMLCGQCLQAPP 63 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 RS+ Y ++ KY LA M Sbjct: 64 AFDATRSLFQYRFPLSATLQQYKYGQLLPLARTMG 98 >gi|310826754|ref|YP_003959111.1| amidophosphoribosyltransferase [Eubacterium limosum KIST612] gi|308738488|gb|ADO36148.1| amidophosphoribosyltransferase [Eubacterium limosum KIST612] Length = 263 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 15 LFHCIYPS--ICPIYSR-IINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69 L ++ +CP+ + + LC C + +T K + Sbjct: 31 LRETLFLPNGVCPVCGKVLFRTESYLCERCAQSLPRVTMPSCKYCGKPLPEKGLDFCGDC 90 Query: 70 MQKDLPLTQIRSVTL-YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 P+ +V L Y LV LK+ L + + M + + Sbjct: 91 GPLKDPVLAGGAVWLHYSGSGQRLVHSLKFGHLPQLGSWIGRQMAEAVRE 140 >gi|317121040|ref|YP_004101043.1| phosphoribosyltransferase [Thermaerobacter marianensis DSM 12885] gi|315591020|gb|ADU50316.1| phosphoribosyltransferase [Thermaerobacter marianensis DSM 12885] Length = 315 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 7/93 (7%) Query: 20 YPSICPIYSRIINL----RFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK--- 72 +P C R + LC C +++ + + + + + Q Sbjct: 51 WPPYCLGCGRYLPGWPPAAPALCEECAARLGHGPGSRCPVCDRPAWLARPGDACSQCRNL 110 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 P +RSV +Y + L+ +KY D LA Sbjct: 111 GPPWVAVRSVGVYGGLLRRLILRMKYGDEPYLA 143 >gi|310819107|ref|YP_003951465.1| phosphoribosyltransferase [Stigmatella aurantiaca DW4/3-1] gi|309392179|gb|ADO69638.1| Phosphoribosyltransferase [Stigmatella aurantiaca DW4/3-1] Length = 289 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 10/99 (10%), Positives = 29/99 (29%), Gaps = 1/99 (1%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI-DK 64 Q + +YP C ++++ + C C + + + Sbjct: 53 QAATRTLRGWAELLYPPSCLACAQVLPTQSPFCETCDTALERLPPACCRTCAEPGAFPAS 112 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 + P +++ + ++ + KY D + Sbjct: 113 TCPRCHLHPPPFSRVWAPFIHEGPVSRAIHRYKYEDHPE 151 >gi|288926892|ref|ZP_06420792.1| competence protein ComF [Prevotella buccae D17] gi|288336331|gb|EFC74712.1| competence protein ComF [Prevotella buccae D17] Length = 235 Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 20/113 (17%) Query: 10 SIIIELFHCIYPSICPIYS-RIINLRFCLCGHC---WSKIHFITATEHILKNNKDNIDKD 65 ++ L+ ++P C I R+ LC C + FI + + K Sbjct: 7 PMLRRLYDMLFPRACAICGQRLALGEQALCAVCNINLPRTRFIE------DPEDNAMAKT 60 Query: 66 PLKSMQKDLPLTQIRSVTLYCDM----SCVLVRLLKYHDRTDLAIMMAQWMFR 114 M + R+ LY + S L+ LKY + MM + M + Sbjct: 61 ISSQMAVE------RATALYRHLSHSSSGALIYNLKYGGHPEYGDMMGELMAK 107 >gi|150388558|ref|YP_001318607.1| phosphoribosyltransferase [Alkaliphilus metalliredigens QYMF] gi|149948420|gb|ABR46948.1| phosphoribosyltransferase [Alkaliphilus metalliredigens QYMF] Length = 242 Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 11/112 (9%) Query: 8 VKSIIIELFHCIYP--SICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNID 63 +K+ L +YP C ++ ++ LC C+ +I F EH + Sbjct: 1 MKAYWGALMDLMYPLDVSCIACKENLSNQTKYYLCDTCYGEIDFF--PEHCCHQCGKILS 58 Query: 64 KD-----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 K + +V Y L+ KY L+ +M Q Sbjct: 59 MTEAVGLCQACESKPPSFERAIAVFQYQGHIKRLIFRFKYEHEPYLSRIMGQ 110 >gi|300113674|ref|YP_003760249.1| competence protein F [Nitrosococcus watsonii C-113] gi|299539611|gb|ADJ27928.1| competence protein F [Nitrosococcus watsonii C-113] Length = 237 Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 1/107 (0%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 + + + L+ +YP C + LC C + + I Sbjct: 2 TVNRAATWLEILWRGLYPPRCALCGAPGTPEHDLCAPCRRDLPAL-GAACSRCARPLPIA 60 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 Q+ P S Y L+ LK+H + LA ++ Q Sbjct: 61 GICGACQQQAPPQHYTFSPFRYAPPLDYLLLQLKFHGKLHLAPLLGQ 107 >gi|255327018|ref|ZP_05368094.1| phosphoribosyltransferase [Rothia mucilaginosa ATCC 25296] gi|255296235|gb|EET75576.1| phosphoribosyltransferase [Rothia mucilaginosa ATCC 25296] Length = 301 Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 12/121 (9%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNN 58 + + +KS L + P CP + + LC C ++ L Sbjct: 19 LTGLAGALKSAGGSLGEVLMPRTCPCCAVPVTYGAGSPLCEACLPQLR------SALAKA 72 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + PL ++R+ + Y + LK RTDL ++ + + R + + Sbjct: 73 ERVYALQPLDGAAAP----EVRAASRYEGSMPRALLALKNAGRTDLLPLLGEGLARSVYE 128 Query: 119 I 119 + Sbjct: 129 L 129 >gi|119899106|ref|YP_934319.1| putative competence protein F [Azoarcus sp. BH72] gi|119671519|emb|CAL95432.1| putative competence protein F [Azoarcus sp. BH72] Length = 230 Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 30/107 (28%), Gaps = 1/107 (0%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 ++ + + P C + +C C +++ A + Sbjct: 3 RLLDFVVDALIPQDCFLCGAPAAG-RAICTACEAELPGAPAQACPCCAVPVASGGRCGEC 61 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 +Q ++ + +V LKY R LA A R Sbjct: 62 LQHPPAFDSTVALFAFAFPVDRMVHALKYRHRLGLADYFAAVALRRG 108 >gi|126697705|ref|YP_001086602.1| putative phosphoribosyl transferase (putative competence protein) [Clostridium difficile 630] gi|115249142|emb|CAJ66953.1| putative phosphoribosyl transferase [Clostridium difficile] Length = 260 Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 10/118 (8%) Query: 5 IQTVKSIIIELFHCIYPS--ICPIYSRIINLRFC--LCGHCWSKIHFIT------ATEHI 54 I+ K++I + IYP C I + I + C+ +++FI I Sbjct: 9 IKNFKNMINKCLDFIYPENISCIICDKSIKKTNTYSIFKSCFKEMNFIQDGCMKCGKPII 68 Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + + ++ KD + S Y D++ +V LKY+ +T +A +AQ M Sbjct: 69 RHSIEKEFIEECSYCFNKDFYFDKSISCIEYNDVTKKMVLGLKYNQKTFMAKYIAQIM 126 >gi|16762777|ref|NP_458394.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144264|ref|NP_807606.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415425|ref|YP_152500.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364355|ref|YP_002143992.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|213161412|ref|ZP_03347122.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213420970|ref|ZP_03354036.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213426879|ref|ZP_03359629.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213647817|ref|ZP_03377870.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289824842|ref|ZP_06544285.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|51701439|sp|Q8Z222|GNTX_SALTI RecName: Full=Protein GntX gi|25321978|pir||AD0997 probable competence protein STY4286 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505083|emb|CAD08104.1| putative competence protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139901|gb|AAO71466.1| putative competence protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129682|gb|AAV79188.1| putative competence protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095832|emb|CAR61405.1| putative competence protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 227 Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R LC C + + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAGHPSLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89 >gi|168235105|ref|ZP_02660163.1| protein GntX [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736680|ref|YP_002116453.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712182|gb|ACF91403.1| protein GntX [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197291553|gb|EDY30905.1| protein GntX [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 227 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R LC C + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSLCPQC--------GLPAAYP------SLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89 >gi|302877488|ref|YP_003846052.1| phosphoribosyltransferase [Gallionella capsiferriformans ES-2] gi|302580277|gb|ADL54288.1| phosphoribosyltransferase [Gallionella capsiferriformans ES-2] Length = 237 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 4/110 (3%) Query: 3 AIIQTVKSIIIELFHCIYPSI-CPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKD 60 +I+ T+K F I P+ C + + L C C ++ + A + Sbjct: 2 SILNTLKLNSRLKFDQILPAQPCVLCGTM--SHAGLWCTACDYEMPYFDAPHCPVCARNT 59 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + +V Y L++ LKYH + LA M+A+ Sbjct: 60 PDGSLCGHCLTHPPAFHHTLAVFSYQFPIDQLIQSLKYHSQLPLAPMLAK 109 >gi|74316335|ref|YP_314075.1| hypothetical protein Tbd_0317 [Thiobacillus denitrificans ATCC 25259] gi|74055830|gb|AAZ96270.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 230 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 29/106 (27%), Gaps = 1/106 (0%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 I + P C + LC C + + A + ++ Sbjct: 3 IRSFLDHLAPRTCLLCGD-TAGARTLCPGCRDSLPWHRAPQCPRCATPTPGGAVCGACLK 61 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + + Y ++ LKYH +A ++ + + Sbjct: 62 HSPAFDRTIAALAYAFPLDRMIPRLKYHGALAVAPLLGECLTEACR 107 >gi|210608824|ref|ZP_03288020.1| hypothetical protein CLONEX_00199 [Clostridium nexile DSM 1787] gi|210152890|gb|EEA83896.1| hypothetical protein CLONEX_00199 [Clostridium nexile DSM 1787] Length = 234 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 4/104 (3%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSM 70 ++ IYP C ++ + LC C K+ +IT K + + Sbjct: 5 KKILGIIYPKTCCFCGKVSDKE--LCKDCAEKVVYITEPRCKKCGKPVRYAEQEYCYDCQ 62 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + Q RS+ ++ + + KY +R A+ M R Sbjct: 63 KNVHAYDQGRSIWIHKMPVSMSIYQFKYKNRRIYGEFYAKEMIR 106 >gi|152977977|ref|YP_001343606.1| competence protein F [Actinobacillus succinogenes 130Z] gi|150839700|gb|ABR73671.1| competence protein F [Actinobacillus succinogenes 130Z] Length = 225 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 12/104 (11%) Query: 23 ICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNI--DKDPLKSMQKDLPLTQI 79 C + R+ R LC C I + + + ++ + ++ Sbjct: 7 RCVLCGGRLALARHGLCSRC---NRLIERFPYCGSCGAPLAVNARHCGRCLRHEPGWDRL 63 Query: 80 RSVTLYCDMSCVLVRLLKYH-----DRTDLAIMMAQWMFRVLEK 118 + Y + VL+ K+ DRT LA +M + R + Sbjct: 64 VVIGRYAEPLSVLIHRFKFQHQFWLDRT-LARLMLLAIIRAKRE 106 >gi|323486258|ref|ZP_08091586.1| amidophosphoribosyltransferase [Clostridium symbiosum WAL-14163] gi|323400476|gb|EGA92846.1| amidophosphoribosyltransferase [Clostridium symbiosum WAL-14163] Length = 242 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 6/106 (5%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEH--ILKN 57 M + S+ ++P CP+ I+ L C C ++ F+ + K Sbjct: 1 MKMEYKRAASL---FLDALFPRRCPVCGDIVMPPGKLICPGCQGRLSFVKSPVCKKCGKE 57 Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 + + ++ Y + + + +KY +R + Sbjct: 58 ILSEYQEYCFDCTRHRRSFEYGIALLNYNEAAGASMAAVKYKNRRE 103 >gi|326625251|gb|EGE31596.1| protein GntX [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 215 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R LC C + +QK P ++ SV Sbjct: 10 ICSVCARAVRQRVSLCPQC--------GLPAAHP------SLPCGRCLQKPPPWQRLVSV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 56 SDYTPPLSLLVHQLKFTRRSEI 77 >gi|323693950|ref|ZP_08108136.1| amidophosphoribosyltransferase [Clostridium symbiosum WAL-14673] gi|323501996|gb|EGB17872.1| amidophosphoribosyltransferase [Clostridium symbiosum WAL-14673] Length = 242 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 6/106 (5%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEH--ILKN 57 M + S+ ++P CP+ I+ L C C ++ F+ + K Sbjct: 1 MKMEYKRAASL---FLDALFPRRCPVCGDIVMPPGKLICPGCQGRLSFVKSPVCKKCGKE 57 Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 + + ++ Y + + + +KY +R + Sbjct: 58 ILSEYQEYCFDCTRHRRSFEYGIALLNYNEAAGASMAAVKYKNRRE 103 >gi|325662408|ref|ZP_08151017.1| hypothetical protein HMPREF0490_01756 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471410|gb|EGC74633.1| hypothetical protein HMPREF0490_01756 [Lachnospiraceae bacterium 4_1_37FAA] Length = 258 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 36/116 (31%), Gaps = 4/116 (3%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 + K I + +YP+ C + + +C C ++ + ++ Sbjct: 22 RRAKLIWHRILELLYPTTCVFCGTVASE--GICESCRKEVKILQEPLCKKCGKPVRYEEQ 79 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + Q RS+ L+ + KY +R A A+ M + Sbjct: 80 EYCYDCQKIIHFYEQGRSLWLHKMPVSQSIYQFKYRNRRVFAQYYAEQMAEQFADL 135 >gi|325981843|ref|YP_004294245.1| phosphoribosyltransferase [Nitrosomonas sp. AL212] gi|325531362|gb|ADZ26083.1| phosphoribosyltransferase [Nitrosomonas sp. AL212] Length = 228 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 23/87 (26%), Gaps = 2/87 (2%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + N F C C + + + + + T+ + Sbjct: 6 CVLCGASTNQDF--CESCMLDLPQLPENHCPICLWPVPTSEICGACLNTPPAFTRTIAAL 63 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 Y L+ KY LA +A Sbjct: 64 RYTFPIDALIHAFKYRANLFLASTLAN 90 >gi|150026456|ref|YP_001297282.1| amidophosphoribosyltransferase [Flavobacterium psychrophilum JIP02/86] gi|149772997|emb|CAL44481.1| Putative amidophosphoribosyltransferase [Flavobacterium psychrophilum JIP02/86] Length = 227 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 11/107 (10%) Query: 11 IIIELFHCIYPSICPIYSRIINL-RFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 ++ L +P+IC S I+ +C C K+ F T D K Sbjct: 1 MLKNLIKLFFPAICSGCSEILLQNEHTICILCRHKMPFTTDLLVD--------DNQSFKK 52 Query: 70 MQKDLPLTQIRSVTLY--CDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 +P+ S+ Y + L+ LKY + ++ +++ +W Sbjct: 53 FYGRIPIEHASSMLYYHKKGIVQQLIHNLKYKNHQEVGLILGEWYAH 99 >gi|160871688|ref|ZP_02061820.1| protein GntX [Rickettsiella grylli] gi|159120487|gb|EDP45825.1| protein GntX [Rickettsiella grylli] Length = 243 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 2/97 (2%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQK 72 + H ++ C I S + + LC C + ++ + N + ++ Sbjct: 14 ILHNLFSHHCIICSEKTHRKIDLCKACEKDLPWLKRVCYSCANPLPYLTTQSICGACLKN 73 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 LP ++ Y D+ + LK+ R D A ++ Sbjct: 74 PLPFYKLCIFFSYTDIIKRFIIGLKFQQRLDYAKILG 110 >gi|238916194|ref|YP_002929711.1| competence protein ComFC [Eubacterium eligens ATCC 27750] gi|238871554|gb|ACR71264.1| competence protein ComFC [Eubacterium eligens ATCC 27750] Length = 243 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 40/103 (38%), Gaps = 6/103 (5%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFC----LCGHCWSKIHFITATEH--ILKNNKDNI 62 K +++E + + P CP+ + +C C K+ +++ K +++ Sbjct: 4 KKVLMEAVNAVLPPACPMCGKPAPFAGGSRVDICPDCMRKVSYVSEPVCLKCGKPVENDE 63 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 + +K+ Q +V Y + KYH++ + A Sbjct: 64 VEYCSDCSRKEHVYDQACAVYEYSKCIKDSIYRFKYHNKREYA 106 >gi|16766798|ref|NP_462413.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167549283|ref|ZP_02343042.1| protein GntX [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167990715|ref|ZP_02571814.1| protein GntX [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168241652|ref|ZP_02666584.1| protein GntX [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449324|ref|YP_002047535.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200388063|ref|ZP_03214675.1| protein GntX [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|51701442|sp|Q8ZLI8|GNTX_SALTY RecName: Full=Protein GntX gi|16422069|gb|AAL22372.1| putative amidophosphoribosyltransferase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194407628|gb|ACF67847.1| protein GntX [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199605161|gb|EDZ03706.1| protein GntX [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205325670|gb|EDZ13509.1| protein GntX [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205330741|gb|EDZ17505.1| protein GntX [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205339021|gb|EDZ25785.1| protein GntX [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261248665|emb|CBG26503.1| putative competence protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995732|gb|ACY90617.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160053|emb|CBW19572.1| putative competence protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914534|dbj|BAJ38508.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226561|gb|EFX51611.1| protein GntX [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323131870|gb|ADX19300.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990362|gb|AEF09345.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 227 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R LC C + + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAAHPSLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89 >gi|255282071|ref|ZP_05346626.1| competence protein F [Bryantella formatexigens DSM 14469] gi|255267390|gb|EET60595.1| competence protein F [Bryantella formatexigens DSM 14469] Length = 301 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 Q + + + P CP+ ++ +C C ++ +I D + Sbjct: 13 QAARDAGMAALDLVLPRRCPLCGKLSE---GICEKCREELPYIRGAVCFRCGRPLADDTE 69 Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 L TQ R++ LY + +KY ++ + Sbjct: 70 EYCPSCSSGRLAYTQGRALYLYRSPLKESLYAVKYQNKRE 109 >gi|168465219|ref|ZP_02699111.1| protein GntX [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632168|gb|EDX50652.1| protein GntX [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 227 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R +C C + + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSVCPQC--------------GLPAGHPSLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 68 SNYTPPLSLLVHQLKFTRRSEI 89 >gi|253998274|ref|YP_003050337.1| hypothetical protein Msip34_0562 [Methylovorus sp. SIP3-4] gi|253984953|gb|ACT49810.1| conserved hypothetical protein [Methylovorus sp. SIP3-4] Length = 227 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 22/83 (26%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + LC C + + A + + ++ Sbjct: 13 CLLCTAADGGDLGLCASCQQDLPWHKAPCCPQCALPSSQGLLCGHCLTSPPAFDHTHALL 72 Query: 84 LYCDMSCVLVRLLKYHDRTDLAI 106 Y +++ KY D +A Sbjct: 73 RYDFPLDAMLQGYKYRDMLHMAR 95 >gi|168260763|ref|ZP_02682736.1| protein GntX [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168818675|ref|ZP_02830675.1| protein GntX [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197251427|ref|YP_002148434.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204928749|ref|ZP_03219948.1| protein GntX [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|238910485|ref|ZP_04654322.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|197215130|gb|ACH52527.1| protein GntX [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204322182|gb|EDZ07380.1| protein GntX [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205344315|gb|EDZ31079.1| protein GntX [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350305|gb|EDZ36936.1| protein GntX [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|320087926|emb|CBY97688.1| Protein gntX [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322614116|gb|EFY11052.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618008|gb|EFY14901.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625378|gb|EFY22204.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629843|gb|EFY26616.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632268|gb|EFY29019.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636381|gb|EFY33088.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643237|gb|EFY39806.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644761|gb|EFY41297.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651214|gb|EFY47598.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654918|gb|EFY51233.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659175|gb|EFY55427.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663124|gb|EFY59328.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668610|gb|EFY64763.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674586|gb|EFY70679.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678208|gb|EFY74269.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682535|gb|EFY78556.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684248|gb|EFY80254.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192197|gb|EFZ77429.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196377|gb|EFZ81529.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201822|gb|EFZ86885.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206364|gb|EFZ91325.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211957|gb|EFZ96784.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216863|gb|EGA01586.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222262|gb|EGA06645.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224277|gb|EGA08566.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228205|gb|EGA12336.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233528|gb|EGA17621.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237010|gb|EGA21077.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243775|gb|EGA27791.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245983|gb|EGA29970.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250759|gb|EGA34637.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255770|gb|EGA39520.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261372|gb|EGA44958.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267655|gb|EGA51137.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268535|gb|EGA52002.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 227 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R LC C + + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAAHPSLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89 >gi|95931035|ref|ZP_01313763.1| phosphoribosyltransferase [Desulfuromonas acetoxidans DSM 684] gi|95132931|gb|EAT14602.1| phosphoribosyltransferase [Desulfuromonas acetoxidans DSM 684] Length = 247 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 40/113 (35%), Gaps = 11/113 (9%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSR--IINLRFCLCGHCWSKIHFITAT--EHILKNNKD 60 I + ++ + + ++P+ C + N F LC C + + Sbjct: 7 IHPLVKLLKAVDNSLFPAACHACQKRLNTNEPF-LCHDC--QTSCLQQPTAHCPRCGQPH 63 Query: 61 ----NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + + + P +++ +Y L++ K+H +T LA +A Sbjct: 64 PATTTQNHLCNRCLTSPPPFNWLKAAGIYQGQLAELLQQFKFHHKTSLASPLA 116 >gi|198244770|ref|YP_002217470.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197939286|gb|ACH76619.1| protein GntX [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 227 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R LC C + + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAAHPSLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89 >gi|322421671|ref|YP_004200894.1| phosphoribosyltransferase [Geobacter sp. M18] gi|320128058|gb|ADW15618.1| phosphoribosyltransferase [Geobacter sp. M18] Length = 245 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 26/98 (26%), Gaps = 13/98 (13%) Query: 24 CPIYSRIINLRFC--------LCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQ 71 C + + +C C +I F+ + + D + Sbjct: 15 CHACRASLPVTGANDGSPRPLICAECLGRISFLVSPLCTVCGAPFATDSGSDHICGACLS 74 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 P RS + L+ KY + LA + Sbjct: 75 HT-PFHTCRSAAILGGPVQDLIHRFKYGGKIHLAEPLG 111 >gi|218131422|ref|ZP_03460226.1| hypothetical protein BACEGG_03040 [Bacteroides eggerthii DSM 20697] gi|317476433|ref|ZP_07935682.1| comF family protein [Bacteroides eggerthii 1_2_48FAA] gi|217986354|gb|EEC52691.1| hypothetical protein BACEGG_03040 [Bacteroides eggerthii DSM 20697] gi|316907459|gb|EFV29164.1| comF family protein [Bacteroides eggerthii 1_2_48FAA] Length = 234 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 35/111 (31%), Gaps = 11/111 (9%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 T K+ + H +P C + + +C C +D Sbjct: 3 NTFKTWFLSFLHLFFPRQCAVCGEPLQEGEDAICLKC--------NMSLPRTGYHLRVDN 54 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 + PL S Y S ++ LLKY R DL +M ++M Sbjct: 55 PVERMFWGKFPLEHATSYFFYQKGSDFRRILHLLKYGGRKDLGEIMGRFMA 105 >gi|197265899|ref|ZP_03165973.1| protein GntX [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197244154|gb|EDY26774.1| protein GntX [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 227 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R LC C + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSLCPQC--------GLPAAHP------SLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 68 SNYTPPLSLLVHQLKFTRRSEI 89 >gi|300776281|ref|ZP_07086139.1| possible competence protein [Chryseobacterium gleum ATCC 35910] gi|300501791|gb|EFK32931.1| possible competence protein [Chryseobacterium gleum ATCC 35910] Length = 217 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 8/98 (8%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKSMQKD 73 + ++P+ C +RII +C C+S+IHF K+ P+++ Sbjct: 2 ILDLLFPNRCLHCNRIIVSEILVCDLCFSQIHFTHYNYFENNPIKEKCSLFFPVENAFGL 61 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111 + + +S ++ LKY R ++A W Sbjct: 62 IRFEE-------EGLSRKIIHELKYRSREKTGKILANW 92 >gi|297537770|ref|YP_003673539.1| phosphoribosyltransferase [Methylotenera sp. 301] gi|297257117|gb|ADI28962.1| phosphoribosyltransferase [Methylotenera sp. 301] Length = 223 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 1/90 (1%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 LF ++ C + + R LC C+ + + A + N + Sbjct: 2 LFDRLFKQRCLLCAANDGGRLGLCDACYKDLPWHNAPQCPQCGLSSN-GLVCGSCLNSPP 60 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 S+ Y +++ KY +L Sbjct: 61 DFDATHSLLTYDFPLDAMMQRYKYGSMLNL 90 >gi|168232649|ref|ZP_02657707.1| protein GntX [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469779|ref|ZP_03075763.1| protein GntX [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194456143|gb|EDX44982.1| protein GntX [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333040|gb|EDZ19804.1| protein GntX [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 227 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R LC C + + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAAHPSLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 68 SNYTPPLSLLVHQLKFTRRSEI 89 >gi|160878406|ref|YP_001557374.1| amidophosphoribosyltransferase [Clostridium phytofermentans ISDg] gi|160427072|gb|ABX40635.1| amidophosphoribosyltransferase [Clostridium phytofermentans ISDg] Length = 245 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 40/108 (37%), Gaps = 3/108 (2%) Query: 9 KSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 + + E+ +YP CPI + I + +C C ++ + + ++ Sbjct: 3 RMVWREILDAVYPKRCPICNEILVPKDRKICSICSEELPVLMEPRCKKCSKPVLAEEQEY 62 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 ++K T+ + LY + + KYH + + A +M Sbjct: 63 CFDCVKKQHHYTRGFACFLYNEKLKKSLSEFKYHAKKEYAEFYVDYMV 110 >gi|78355831|ref|YP_387280.1| ComF family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218236|gb|ABB37585.1| ComF family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 251 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 28/95 (29%), Gaps = 12/95 (12%) Query: 24 CPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C R ++ C C H L++ + + P +R Sbjct: 36 CNSCRRQLVQRTGGFCPRC--------GLPHALESMPLTL---CSSCISTPPPWLSLRFY 84 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 LY + ++ K+ L +M + + L Sbjct: 85 GLYDGLLRRIIIRYKHTPDLTLHPLMGHMLCQALR 119 >gi|134096080|ref|YP_001101155.1| amidophosphoribosyltransferase [Herminiimonas arsenicoxydans] gi|133739983|emb|CAL63034.1| Putative amidophosphoribosyltransferase [Herminiimonas arsenicoxydans] Length = 247 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 12/112 (10%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK------NNKDNI 62 + I L + PS C + + R LC C + F T + + Sbjct: 10 RHFIRHLPTAL-PSSCALCG--FSSRQALCVDC--EQRFFHQTPPRCLQCASPLPHTGAL 64 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + + Y LV LK+ +R LA + A M R Sbjct: 65 AQRCGACLGDPPAFDATIVAGDYAAPVDHLVLALKFGNRLALAPLFAS-MLR 115 >gi|254293167|ref|YP_003059190.1| phosphoribosyltransferase [Hirschia baltica ATCC 49814] gi|254041698|gb|ACT58493.1| phosphoribosyltransferase [Hirschia baltica ATCC 49814] Length = 232 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 11/102 (10%) Query: 28 SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---------PLKSMQKDLPLTQ 78 I + W I F+ D + + + Sbjct: 3 GDQIAGPGLIEVEYWLDIKFLNMPVCCRCGAPFEAMHDVGDAYELVECAACIARKPAFDR 62 Query: 79 IRSVTLYCDMSCVLVRLLKYH-DRTDLAIMMAQWMFRVLEKI 119 R+V +Y D++ ++ K DR L +M+QW V + Sbjct: 63 ARAVFIYDDLTSRIILRFKNGADRNGL-KLMSQWCVDVAGDL 103 >gi|326336345|ref|ZP_08202516.1| amidophosphoribosyl-transferase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691519|gb|EGD33487.1| amidophosphoribosyl-transferase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 241 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 13/106 (12%) Query: 10 SIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 SI ++ ++P C S+I+ LC C ++ H + D + Sbjct: 13 SIYKDILSILFPKYCLGCSQIMGSQEDFLCSTCRHELR--ETLFHTQE------DNPMKE 64 Query: 69 SMQKDLPLTQIRSVTLYCDMS---CVLVRLLKYHDRTDLAIMMAQW 111 +P+ + + LY + L+ LKY + ++ + +W Sbjct: 65 KFWGRIPVNKA-AALLYYEKGSITQRLIHALKYQGKENIGKWLGEW 109 >gi|301329724|ref|ZP_07222467.1| ComF family protein [Escherichia coli MS 78-1] gi|312972323|ref|ZP_07786497.1| protein gntX [Escherichia coli 1827-70] gi|300844196|gb|EFK71956.1| ComF family protein [Escherichia coli MS 78-1] gi|310334700|gb|EFQ00905.1| protein gntX [Escherichia coli 1827-70] gi|323164977|gb|EFZ50768.1| protein gntX [Shigella sonnei 53G] gi|323970011|gb|EGB65286.1| comF family protein [Escherichia coli TA007] Length = 215 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 56 ADYAPPLSLLIHQLKFSRRSEI 77 >gi|161505924|ref|YP_001573035.1| gluconate periplasmic binding protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867271|gb|ABX23894.1| hypothetical protein SARI_04105 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 243 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + + + LC C + +QK P ++ SV Sbjct: 38 ICSVCAHAVRQSISLCPQC--------GLPAAHP------SLPCGRCLQKPPPWQRLVSV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R+++ Sbjct: 84 SDYKPPLSLLVHQLKFTRRSEI 105 >gi|331679477|ref|ZP_08380147.1| protein GntX [Escherichia coli H591] gi|73857392|gb|AAZ90099.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|331072649|gb|EGI43974.1| protein GntX [Escherichia coli H591] Length = 243 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 38 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 84 ADYAPPLSLLIHQLKFSRRSEI 105 >gi|331086209|ref|ZP_08335291.1| hypothetical protein HMPREF0987_01594 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406368|gb|EGG85882.1| hypothetical protein HMPREF0987_01594 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 258 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 4/109 (3%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65 K I + +YP+ C + + +C C ++ + ++ Sbjct: 23 RAKLIWHRILELLYPTTCVFCGTVASE--GICESCRKEVKILQEPLCKKCGKPVRYEEQE 80 Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Q RS+ L+ + KY +R A A+ M Sbjct: 81 YCYDCQKIIHFYEQGRSLWLHKMPVSQSIYQFKYRNRRVFAQYYAEQMA 129 >gi|225573023|ref|ZP_03781778.1| hypothetical protein RUMHYD_01214 [Blautia hydrogenotrophica DSM 10507] gi|225039620|gb|EEG49866.1| hypothetical protein RUMHYD_01214 [Blautia hydrogenotrophica DSM 10507] Length = 239 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 7/112 (6%) Query: 10 SIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--P 66 I + +YP CPI +I+ + +C C ++ I + + Sbjct: 4 RIKESFLNALYPRCCPICHQILKEQNWLICPKCEGELKPIGEPRCKKCGKRIFYMEKEYC 63 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHD--RTDLAIMMAQWMFRVL 116 +++ + R + Y + LLKY D R + AQ M R Sbjct: 64 QDCSRREHVFDEGRGIFDYDERMR--ASLLKYKDGGRREYGDFYAQAMIRYG 113 >gi|70732979|ref|YP_262752.1| competence protein ComF [Pseudomonas fluorescens Pf-5] gi|68347278|gb|AAY94884.1| competence protein ComF [Pseudomonas fluorescens Pf-5] Length = 246 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 31/88 (35%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + + LC C ++ ++ A + + +Q+ ++ + Sbjct: 20 ACLLCDEPSDSALALCAPCLDELPWLGAQCSVCALPLPGPGLTCGQCLQEPPAFQRVIAP 79 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 Y L+ K+H++ +MA+ Sbjct: 80 WRYDFPVDSLISRFKHHEKWPFGRLMAE 107 >gi|194435591|ref|ZP_03067694.1| protein GntX [Escherichia coli 101-1] gi|194425134|gb|EDX41118.1| protein GntX [Escherichia coli 101-1] Length = 248 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 43 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 88 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 89 ADYAPPLSLLIHQLKFSRRSEI 110 >gi|89889786|ref|ZP_01201297.1| putative amidophosphoribosyl-transferase [Flavobacteria bacterium BBFL7] gi|89518059|gb|EAS20715.1| putative amidophosphoribosyl-transferase [Flavobacteria bacterium BBFL7] Length = 228 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 11/108 (10%) Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 +K I + F+ +YP +C + +C C T L N D+ Sbjct: 1 MKRWIYDFFNLLYPELCVGCETVLTTGESLICTSC--------RTHLPLTNFHKTSDEKM 52 Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWM 112 + + + + S+ Y ++ LKY + +++ + W+ Sbjct: 53 RELFYARVDVQHVTSLFYYEKIGAVQQMIHQLKYRKKEEISSFIGSWL 100 >gi|262195009|ref|YP_003266218.1| competence protein F [Haliangium ochraceum DSM 14365] gi|262078356|gb|ACY14325.1| competence protein F, putative [Haliangium ochraceum DSM 14365] Length = 239 Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 5/104 (4%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFC----LCGHCWSKI-HFITATEHILKNNKDNIDKD 65 ++ +F ++ C + + LC C + +A + + ++ Sbjct: 1 MLAAVFDLLFAPGCAACDQPLTGAGARALPLCAVCAISLYPLDSACPRCAEPLEGPVNLL 60 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + + P + Y +R LKY R D+A +A Sbjct: 61 CRRCRTRPPPFASAHAPYRYGGELARALRRLKYQRRADIARALA 104 >gi|302390143|ref|YP_003825964.1| phosphoribosyltransferase [Thermosediminibacter oceani DSM 16646] gi|302200771|gb|ADL08341.1| phosphoribosyltransferase [Thermosediminibacter oceani DSM 16646] Length = 240 Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 4/100 (4%) Query: 4 IIQTVKSIIIELFHCIYP--SICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 + +K I L ++P C + R+ LCG C ++ I+ + Sbjct: 2 LYVGIKKITGFLLDALFPESPFCAVCGSRLPQGERLLCGSCRDRMEPISQPFCLKCGRPL 61 Query: 61 NIDKD-PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + K+ R+ +Y + ++ L KY Sbjct: 62 YCENAVCADCSDKNRYFVGARAWGVYRGVLKQVIHLYKYR 101 >gi|238925132|ref|YP_002938649.1| putative amidophosphoribosyltransferase [Eubacterium rectale ATCC 33656] gi|238876808|gb|ACR76515.1| predicted amidophosphoribosyltransferase [Eubacterium rectale ATCC 33656] Length = 259 Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 48/137 (35%), Gaps = 20/137 (14%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKN---- 57 ++ +K I + + ++P CP+ II + + C K+ + + + Sbjct: 8 GLVNKIKDIGRGVINLVFPPRCPVCDGIIGPVERYIHSRCCEKLFPVEQPQCMRCGKPVL 67 Query: 58 -------NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + + M++D Q +++ Y + KY +R + A AQ Sbjct: 68 SERREYCDDCARALEHHRQMREDDSYRQGKALFAYKGSIKQTMYRFKYSNRREYAAYFAQ 127 Query: 111 --------WMFRVLEKI 119 W+ R + Sbjct: 128 TAVERYSDWILRCGIDV 144 >gi|110807248|ref|YP_690768.1| gluconate periplasmic binding protein [Shigella flexneri 5 str. 8401] gi|332281959|ref|ZP_08394372.1| conserved hypothetical protein [Shigella sp. D9] gi|30043564|gb|AAP19284.1| hypothetical protein S4330 [Shigella flexneri 2a str. 2457T] gi|56383886|gb|AAN44897.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|110616796|gb|ABF05463.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|281602767|gb|ADA75751.1| gluconate periplasmic binding protein [Shigella flexneri 2002017] gi|332104311|gb|EGJ07657.1| conserved hypothetical protein [Shigella sp. D9] Length = 243 Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 38 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105 >gi|323179061|gb|EFZ64635.1| protein gntX [Escherichia coli 1180] gi|325498955|gb|EGC96814.1| gluconate periplasmic binding protein [Escherichia fergusonii ECD227] gi|332086008|gb|EGI91172.1| protein gntX [Shigella dysenteriae 155-74] gi|332751297|gb|EGJ81700.1| protein gntX [Shigella flexneri 2747-71] gi|332763600|gb|EGJ93839.1| comF family protein [Shigella flexneri 2930-71] gi|332996635|gb|EGK16260.1| protein gntX [Shigella flexneri K-272] gi|333012517|gb|EGK31898.1| protein gntX [Shigella flexneri K-304] gi|333013044|gb|EGK32420.1| protein gntX [Shigella flexneri K-227] Length = 215 Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77 >gi|315607124|ref|ZP_07882128.1| competence protein [Prevotella buccae ATCC 33574] gi|315251178|gb|EFU31163.1| competence protein [Prevotella buccae ATCC 33574] Length = 228 Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 14/109 (12%) Query: 11 IIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 ++ L+ ++P C I R+ LC C + T + + K Sbjct: 1 MLRRLYDMLFPRACAICGQRLALGEQALCAVCNINLP---RTRFTEDPEDNAMAKTISSQ 57 Query: 70 MQKDLPLTQIRSVTLYCDM----SCVLVRLLKYHDRTDLAIMMAQWMFR 114 M + R+ LY + S L+ LKY + MM + M + Sbjct: 58 MAVE------RATALYRHLSHSSSGALIYNLKYGGHPEYGDMMGELMAK 100 >gi|229829628|ref|ZP_04455697.1| hypothetical protein GCWU000342_01725 [Shuttleworthia satelles DSM 14600] gi|229791617|gb|EEP27731.1| hypothetical protein GCWU000342_01725 [Shuttleworthia satelles DSM 14600] Length = 258 Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 6/108 (5%) Query: 17 HCIYPSICPIYSRII---NLRFCLCGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQ 71 IYP CP R++ CG C +I + + + + Sbjct: 5 SIIYPPTCPGCDRVLRPEERERGFCGSCLEQIVLAEEPCCKICGKALGDERQERCADCRK 64 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAI-MMAQWMFRVLEK 118 ++ TQ +S+ +Y + KY R A+ + R Sbjct: 65 EEHLFTQGKSLFIYRGPMKEAMYRFKYSRRLSYRRIFAAEALRRYGAD 112 >gi|194445852|ref|YP_002042762.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194404515|gb|ACF64737.1| protein GntX [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 227 Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R +C C + + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSVCPQC--------------GLPARHPSLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R ++ Sbjct: 68 SNYTPPLSLLVHQLKFTRRNEI 89 >gi|157162890|ref|YP_001460208.1| gluconate periplasmic binding protein [Escherichia coli HS] gi|161986432|ref|YP_312335.2| gluconate periplasmic binding protein [Shigella sonnei Ss046] gi|191167292|ref|ZP_03029109.1| protein GntX [Escherichia coli B7A] gi|191167880|ref|ZP_03029684.1| protein GntX [Escherichia coli B7A] gi|209920871|ref|YP_002294955.1| gluconate periplasmic binding protein [Escherichia coli SE11] gi|218555962|ref|YP_002388875.1| gluconate periplasmic binding protein [Escherichia coli IAI1] gi|254163341|ref|YP_003046449.1| gluconate periplasmic binding protein [Escherichia coli B str. REL606] gi|297516951|ref|ZP_06935337.1| gluconate periplasmic binding protein [Escherichia coli OP50] gi|300926896|ref|ZP_07142662.1| ComF family protein [Escherichia coli MS 182-1] gi|300931054|ref|ZP_07146410.1| ComF family protein [Escherichia coli MS 187-1] gi|309794684|ref|ZP_07689106.1| ComF family protein [Escherichia coli MS 145-7] gi|331670235|ref|ZP_08371074.1| protein GntX [Escherichia coli TA271] gi|157068570|gb|ABV07825.1| protein GntX [Escherichia coli HS] gi|190902053|gb|EDV61798.1| protein GntX [Escherichia coli B7A] gi|190902644|gb|EDV62376.1| protein GntX [Escherichia coli B7A] gi|209914130|dbj|BAG79204.1| conserved hypothetical protein [Escherichia coli SE11] gi|218362730|emb|CAR00356.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli IAI1] gi|242378936|emb|CAQ33734.1| protein involved in utilization of DNA as a carbon source [Escherichia coli BL21(DE3)] gi|253975242|gb|ACT40913.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli B str. REL606] gi|253979398|gb|ACT45068.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli BL21(DE3)] gi|300417100|gb|EFK00411.1| ComF family protein [Escherichia coli MS 182-1] gi|300461109|gb|EFK24602.1| ComF family protein [Escherichia coli MS 187-1] gi|308121734|gb|EFO58996.1| ComF family protein [Escherichia coli MS 145-7] gi|323939367|gb|EGB35578.1| comF family protein [Escherichia coli E482] gi|323959587|gb|EGB55239.1| comF family protein [Escherichia coli H489] gi|324018650|gb|EGB87869.1| ComF family protein [Escherichia coli MS 117-3] gi|324116390|gb|EGC10309.1| comF family protein [Escherichia coli E1167] gi|331062297|gb|EGI34217.1| protein GntX [Escherichia coli TA271] Length = 227 Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 68 ADYAPPLSLLIHQLKFSRRSEI 89 >gi|62182012|ref|YP_218429.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161616553|ref|YP_001590518.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205354866|ref|YP_002228667.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858750|ref|YP_002245401.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|62129645|gb|AAX67348.1| putative amidophosphoribosyltransferase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365917|gb|ABX69685.1| hypothetical protein SPAB_04369 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205274647|emb|CAR39701.1| putative competence protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710553|emb|CAR34911.1| putative competence protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|322716500|gb|EFZ08071.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326630012|gb|EGE36355.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 227 Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R +C C + + +QK P ++ SV Sbjct: 22 ICSVCARAVRQRVSVCPQC--------------GLPARHPSLPCGRCLQKPPPWQRLVSV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R ++ Sbjct: 68 SNYTPPLSLLVHQLKFTRRNEI 89 >gi|301645853|ref|ZP_07245767.1| ComF family protein [Escherichia coli MS 146-1] gi|301075842|gb|EFK90648.1| ComF family protein [Escherichia coli MS 146-1] Length = 215 Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77 >gi|283798900|ref|ZP_06348053.1| putative competence protein [Clostridium sp. M62/1] gi|291073364|gb|EFE10728.1| putative competence protein [Clostridium sp. M62/1] Length = 256 Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 3/87 (3%) Query: 20 YPSICPIYSRIINLRFCL-CGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQKDLPL 76 +P CP+ ++ + L C C K+ F+T K + + ++ Sbjct: 32 FPRRCPVCGDVVLPKGRLICPGCVKKLSFVTPPVCMKCGKEIDSGLLEYCPDCARRPKSF 91 Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTD 103 ++ Y + + +KY ++ + Sbjct: 92 EYGMALLNYNKTAAASMAAVKYRNKRE 118 >gi|254038580|ref|ZP_04872636.1| GntX [Escherichia sp. 1_1_43] gi|331644113|ref|ZP_08345242.1| protein GntX [Escherichia coli H736] gi|606348|gb|AAA58211.1| ORF_o243 [Escherichia coli str. K-12 substr. MG1655] gi|226839086|gb|EEH71109.1| GntX [Escherichia sp. 1_1_43] gi|331036407|gb|EGI08633.1| protein GntX [Escherichia coli H736] Length = 243 Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 38 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105 >gi|170018351|ref|YP_001723305.1| gluconate periplasmic binding protein [Escherichia coli ATCC 8739] gi|169753279|gb|ACA75978.1| comF family protein [Escherichia coli ATCC 8739] Length = 227 Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 68 ADYAPPLSLLIHQLKFSRRSEI 89 >gi|164687113|ref|ZP_02211141.1| hypothetical protein CLOBAR_00739 [Clostridium bartlettii DSM 16795] gi|164603998|gb|EDQ97463.1| hypothetical protein CLOBAR_00739 [Clostridium bartlettii DSM 16795] Length = 272 Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 10/108 (9%) Query: 15 LFHCIYPS--ICPIYSRII--NLRFCLCGHCWSKIHFIT------ATEHILKNNKDNIDK 64 L IYP C I I + +C C+ ++HF+ + N + K Sbjct: 27 LLDFIYPKNISCIICDNPIKLTNSYSICKDCFKELHFLKDACLKCGKPLVNHNLEYENIK 86 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 D ++ + S Y S ++ KY ++T +AQ M Sbjct: 87 DCPSCKRRTFYFDRAISCIEYNKTSKKMILDFKYRNKTYFCKYVAQIM 134 >gi|134300912|ref|YP_001114408.1| phosphoribosyltransferase [Desulfotomaculum reducens MI-1] gi|134053612|gb|ABO51583.1| phosphoribosyltransferase [Desulfotomaculum reducens MI-1] Length = 237 Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 4/85 (4%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQIRS 81 C + R + +C C + + + + P Q R+ Sbjct: 19 CQLCGR--TGDWDICPTCSHWLVQWEGKPKCQICGRSLAYPGVLCQECQHRQPPFVQARA 76 Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAI 106 V Y + LLKY R L Sbjct: 77 VGPYEGGLRDAIHLLKYKGRKTLVP 101 >gi|307132918|ref|YP_003884934.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Dickeya dadantii 3937] gi|306530447|gb|ADN00378.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Dickeya dadantii 3937] Length = 234 Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 6/99 (6%) Query: 22 SICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 + C + + + + +C HC + + + +Q+ P + Sbjct: 6 AQCWLCQQPLYHSDHGICSHCRRHLPQPVTCCPRCGLPSASDALPCGRCLQQPPPWQSLL 65 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ-----WMFR 114 V+ Y L++ LK+ R +LA +A+ W+ R Sbjct: 66 FVSDYRPPLSTLLKRLKFQGRAELAPALARLILLQWLAR 104 >gi|332085564|gb|EGI90730.1| protein gntX [Shigella boydii 5216-82] Length = 227 Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|298370454|ref|ZP_06981770.1| ComF/gntX family protein [Neisseria sp. oral taxon 014 str. F0314] gi|298281914|gb|EFI23403.1| ComF/gntX family protein [Neisseria sp. oral taxon 014 str. F0314] Length = 240 Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 24/95 (25%), Gaps = 3/95 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIH--FITAT-EHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + LC C + F L + +K ++ Sbjct: 17 RCVLCHDSAPASDGLCAGCAGDLASAFTDPAASCPLCFGFSAGAAVCGRCQKKPPRFERL 76 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + Y ++ K+ + +A M R Sbjct: 77 WASVYYEPPVSSMIHQFKHLADLSMLPPLAGLMMR 111 >gi|293453719|ref|ZP_06664138.1| gluconate periplasmic binding protein [Escherichia coli B088] gi|291321845|gb|EFE61276.1| gluconate periplasmic binding protein [Escherichia coli B088] Length = 227 Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|34540020|ref|NP_904499.1| competence protein F-like protein [Porphyromonas gingivalis W83] gi|34396331|gb|AAQ65398.1| competence protein F-related protein [Porphyromonas gingivalis W83] Length = 246 Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 43/113 (38%), Gaps = 13/113 (11%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKI-HFITATEHILKNNKD 60 + ++ +I ++ +P CP+ ++ +C C ++ +I ++ L Sbjct: 7 GTGRHIRLLIRKVLDLFFPRYCPVCDSLLAETEIGVCPRCMVRMPRYIEGMQYGLDRLNG 66 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 ++ D L S+ + ++ LKY +++ M+ + M Sbjct: 67 DVYIDALYSLFI---FKE-------DGGVRPMIHALKYGGYSEIGEMLGR-MA 108 >gi|161485822|ref|NP_709190.3| gluconate periplasmic binding protein [Shigella flexneri 2a str. 301] gi|161486382|ref|NP_839473.2| gluconate periplasmic binding protein [Shigella flexneri 2a str. 2457T] gi|193068814|ref|ZP_03049774.1| protein GntX [Escherichia coli E110019] gi|194431130|ref|ZP_03063423.1| protein GntX [Shigella dysenteriae 1012] gi|218550671|ref|YP_002384462.1| gluconate periplasmic binding protein [Escherichia fergusonii ATCC 35469] gi|218697096|ref|YP_002404763.1| gluconate periplasmic binding protein [Escherichia coli 55989] gi|256020758|ref|ZP_05434623.1| gluconate periplasmic binding protein [Shigella sp. D9] gi|260857520|ref|YP_003231411.1| gluconate periplasmic binding protein GntX [Escherichia coli O26:H11 str. 11368] gi|260870139|ref|YP_003236541.1| gluconate periplasmic binding protein GntX [Escherichia coli O111:H- str. 11128] gi|307311922|ref|ZP_07591560.1| comF family protein [Escherichia coli W] gi|51701421|sp|Q83J92|GNTX_SHIFL RecName: Full=Protein GntX gi|192957890|gb|EDV88333.1| protein GntX [Escherichia coli E110019] gi|194420585|gb|EDX36661.1| protein GntX [Shigella dysenteriae 1012] gi|218353828|emb|CAV00184.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli 55989] gi|218358212|emb|CAQ90859.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia fergusonii ATCC 35469] gi|257756169|dbj|BAI27671.1| gluconate periplasmic binding protein GntX [Escherichia coli O26:H11 str. 11368] gi|257766495|dbj|BAI37990.1| gluconate periplasmic binding protein GntX [Escherichia coli O111:H- str. 11128] gi|306908066|gb|EFN38566.1| comF family protein [Escherichia coli W] gi|313647285|gb|EFS11737.1| protein gntX [Shigella flexneri 2a str. 2457T] gi|315062691|gb|ADT77018.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli W] gi|320199586|gb|EFW74176.1| gluconate periplasmic binding protein [Escherichia coli EC4100B] gi|323154248|gb|EFZ40451.1| protein gntX [Escherichia coli EPECa14] gi|323376721|gb|ADX48989.1| comF family protein [Escherichia coli KO11] gi|324111726|gb|EGC05706.1| comF family protein [Escherichia fergusonii B253] gi|332749485|gb|EGJ79902.1| protein gntX [Shigella flexneri K-671] gi|332750332|gb|EGJ80743.1| protein gntX [Shigella flexneri 4343-70] gi|332996396|gb|EGK16023.1| protein gntX [Shigella flexneri VA-6] gi|332997062|gb|EGK16678.1| protein gntX [Shigella flexneri K-218] Length = 227 Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|224826043|ref|ZP_03699146.1| competence protein F [Lutiella nitroferrum 2002] gi|224601680|gb|EEG07860.1| competence protein F [Lutiella nitroferrum 2002] Length = 236 Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 1/94 (1%) Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPL 76 + C + R LC C + + + A + Sbjct: 13 RLFFNQPCLLCGTS-GTRHGLCPPCHACLPRLPAERCPHCAEPVAAGSLCGACQRHPPAF 71 Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + L+ KY R ++A + + Sbjct: 72 DALHVSYRFDYPLDGLIHAFKYGKRLEMAGALGR 105 >gi|121997755|ref|YP_001002542.1| competence protein F [Halorhodospira halophila SL1] gi|121589160|gb|ABM61740.1| competence protein F [Halorhodospira halophila SL1] Length = 238 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 2/100 (2%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 + +V I + +YP C + + LC C + + + T + Sbjct: 5 DAMHSVNKWIRNVPLALYPPRCRLCDAAGSDGLDLCRGCRADLPW--NTPCCPQCALPTD 62 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102 P Q+ Y L+ K+ R Sbjct: 63 GTTPCPCRQRPPAFQHAVVPLRYEGAVESLITAFKFRGRL 102 >gi|88606693|ref|YP_505817.1| comF family protein [Anaplasma phagocytophilum HZ] gi|88597756|gb|ABD43226.1| comF family protein [Anaplasma phagocytophilum HZ] Length = 217 Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 3/97 (3%) Query: 25 PIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQIRSVT 83 LC C + I F+ I + ++ + L+ + SV Sbjct: 1 MNCGIYTVRDAALCVSCINNIKFLQGYFCIKCGKNLEQNAGVCVRCTAFNSHLSALESVF 60 Query: 84 LYCDMSCVLVRLLK-YHDRTDLAIMMAQWMFRVLEKI 119 Y + S +V K Y D +++ A WMF +++ Sbjct: 61 EYDNTSKHMVLQFKFYGDISNI-KTYAGWMFEKGKEL 96 >gi|320181905|gb|EFW56811.1| gluconate periplasmic binding protein [Shigella boydii ATCC 9905] Length = 227 Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|257091917|ref|YP_003165558.1| phosphoribosyltransferase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044441|gb|ACV33629.1| phosphoribosyltransferase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 235 Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 28/97 (28%), Gaps = 1/97 (1%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 ++ + P C + + LC C + + + AT L + + Sbjct: 10 LVRRSCKRLLPQDCLLCGAA-SGTTLLCPACATDLPRLPATRCPLCALPTPGGSVCGRCL 68 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107 +V Y LV+ KY R L Sbjct: 69 TAPPHYDATLAVYRYAFPIDKLVQAFKYGHRLALGAW 105 >gi|89110597|ref|AP_004377.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli str. K-12 substr. W3110] gi|90111589|ref|NP_417872.2| protein required for the utilization of DNA as a carbon source [Escherichia coli str. K-12 substr. MG1655] gi|170082929|ref|YP_001732249.1| gluconate periplasmic binding protein [Escherichia coli str. K-12 substr. DH10B] gi|238902504|ref|YP_002928300.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli BW2952] gi|253771758|ref|YP_003034589.1| gluconate periplasmic binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|256025859|ref|ZP_05439724.1| gluconate periplasmic binding protein [Escherichia sp. 4_1_40B] gi|300815388|ref|ZP_07095613.1| ComF family protein [Escherichia coli MS 107-1] gi|300946844|ref|ZP_07161085.1| ComF family protein [Escherichia coli MS 116-1] gi|300956743|ref|ZP_07169012.1| ComF family protein [Escherichia coli MS 175-1] gi|301023029|ref|ZP_07186839.1| ComF family protein [Escherichia coli MS 196-1] gi|307140099|ref|ZP_07499455.1| gluconate periplasmic binding protein [Escherichia coli H736] gi|6136739|sp|P46846|GNTX_ECOLI RecName: Full=Protein GntX gi|85676628|dbj|BAE77878.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli str. K12 substr. W3110] gi|87082263|gb|AAC76438.2| protein required for the utilization of DNA as a carbon source [Escherichia coli str. K-12 substr. MG1655] gi|169890764|gb|ACB04471.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli str. K-12 substr. DH10B] gi|238861309|gb|ACR63307.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli BW2952] gi|253322802|gb|ACT27404.1| comF family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|260447568|gb|ACX37990.1| comF family protein [Escherichia coli DH1] gi|299880992|gb|EFI89203.1| ComF family protein [Escherichia coli MS 196-1] gi|300316463|gb|EFJ66247.1| ComF family protein [Escherichia coli MS 175-1] gi|300453499|gb|EFK17119.1| ComF family protein [Escherichia coli MS 116-1] gi|300532280|gb|EFK53342.1| ComF family protein [Escherichia coli MS 107-1] gi|309703823|emb|CBJ03164.1| putative competence protein [Escherichia coli ETEC H10407] gi|315137989|dbj|BAJ45148.1| GntX [Escherichia coli DH1] gi|315614681|gb|EFU95321.1| protein gntX [Escherichia coli 3431] gi|323934597|gb|EGB30997.1| comF family protein [Escherichia coli E1520] Length = 227 Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|271502335|ref|YP_003335361.1| phosphoribosyltransferase [Dickeya dadantii Ech586] gi|270345890|gb|ACZ78655.1| phosphoribosyltransferase [Dickeya dadantii Ech586] Length = 239 Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 5/92 (5%) Query: 22 SICPIYSR-IINLRFCLCGHCWSKIH--FITATEHILKNNKDNIDKDPLKSMQKDLPLTQ 78 + C + + + + +C HC + + L + + + +Q+ P Sbjct: 6 AQCWLCQQPLYHSHHGICSHCCRHLPQPLVCCPRCGLPSASGIL--PCGRCLQQPPPWQS 63 Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + SV+ Y L++ K R++LA +A+ Sbjct: 64 LLSVSDYRPPLSHLIKRFKLQGRSELAPTLAR 95 >gi|77165567|ref|YP_344092.1| competence protein F [Nitrosococcus oceani ATCC 19707] gi|254433456|ref|ZP_05046964.1| hypothetical protein NOC27_387 [Nitrosococcus oceani AFC27] gi|76883881|gb|ABA58562.1| competence protein F [Nitrosococcus oceani ATCC 19707] gi|207089789|gb|EDZ67060.1| hypothetical protein NOC27_387 [Nitrosococcus oceani AFC27] Length = 246 Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 1/99 (1%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 + L+ +YP +C + + LC C + + Q Sbjct: 10 LETLWRELYPPLCALCGAPGTRKHDLCAPCRRDLPAL-GAACYRCARPLPTAGICGACQQ 68 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 P S Y L+ LK+H + LA ++ Q Sbjct: 69 HAPPQNCTFSPFRYAPPLDYLLLQLKFHGKLHLAPLLGQ 107 >gi|157372865|ref|YP_001480854.1| gluconate periplasmic binding protein [Serratia proteamaculans 568] gi|157324629|gb|ABV43726.1| putative competence-related protein F [Serratia proteamaculans 568] Length = 227 Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 32/91 (35%), Gaps = 5/91 (5%) Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + + +C +C + T + + +Q+ P + Sbjct: 7 RCWLCRQPLRLSHHGICSYCLRHLP--TKPLCCPRCGLPAGDAALPCGRCLQQPPPWQAL 64 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 V+ Y L++ K+ +LA ++A+ Sbjct: 65 VFVSDYQAPLRQLIKKFKFQHTPELAPLLAR 95 >gi|169832221|ref|YP_001718203.1| phosphoribosyltransferase [Candidatus Desulforudis audaxviator MP104C] gi|169639065|gb|ACA60571.1| phosphoribosyltransferase [Candidatus Desulforudis audaxviator MP104C] Length = 214 Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 6/84 (7%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKD------PLKSMQKDLPLTQIRSVTLYCDMSC 90 +C C +I ++ + + + + P R+ Y + C Sbjct: 1 MCPACRGEIEGLSGQPYCDRCGRFFSPVPAPEPRLCRDCRRVARPFECCRAYAPYEGVLC 60 Query: 91 VLVRLLKYHDRTDLAIMMAQWMFR 114 V LKY R +LA + + + R Sbjct: 61 EAVHRLKYGRRRELAGPLGELLAR 84 >gi|315923979|ref|ZP_07920207.1| competence protein F [Pseudoramibacter alactolyticus ATCC 23263] gi|315622819|gb|EFV02772.1| competence protein F [Pseudoramibacter alactolyticus ATCC 23263] Length = 248 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 6/118 (5%) Query: 6 QTVKSIIIELFHCIYPS--ICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKN--NKD 60 +TVK++ L ++ CPI R + + R LC C +H T D Sbjct: 2 KTVKAMARWLSRLVFSDNDSCPICGRVLFDERRFLCSRCEEDLHRATGRVCKGCGRVLVD 61 Query: 61 NIDKDPLKSMQK-DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 ++ + ++ + +Y + L+ K+ R LA+ + M + Sbjct: 62 DVAVLCPECRREMSPVFDGGFTWLVYGQSASRLMYSFKFDGRRQLALWAGREMGKAAA 119 >gi|312968275|ref|ZP_07782485.1| protein gntX [Escherichia coli 2362-75] gi|312287100|gb|EFR15010.1| protein gntX [Escherichia coli 2362-75] Length = 215 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77 >gi|323188997|gb|EFZ74281.1| protein gntX [Escherichia coli RN587/1] Length = 215 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77 >gi|323974783|gb|EGB69895.1| comF family protein [Escherichia coli TW10509] Length = 215 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R ++ Sbjct: 56 ADYAPPLSPLIHQLKFSRRCEI 77 >gi|300985359|ref|ZP_07177415.1| ComF family protein [Escherichia coli MS 45-1] gi|300408100|gb|EFJ91638.1| ComF family protein [Escherichia coli MS 45-1] Length = 227 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +Q P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQNPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|283787952|ref|YP_003367817.1| competence protein [Citrobacter rodentium ICC168] gi|282951406|emb|CBG91105.1| putative competence protein [Citrobacter rodentium ICC168] Length = 227 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 14/88 (15%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + R R LC C + + +QK P ++ ++ Sbjct: 22 ICSVCQRAARRRVSLCPQC--------------GLPSTHATLSCGRCLQKPPPWQRLIAI 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 Y L+ LK+ R ++A +A+ Sbjct: 68 GDYAPPLSALIHQLKFSRRAEIAPALAR 95 >gi|58580077|ref|YP_199093.1| competence protein F [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622075|ref|YP_449447.1| competence protein F [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|58424671|gb|AAW73708.1| competence protein F [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366015|dbj|BAE67173.1| competence protein F [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 243 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 8/112 (7%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---PLKS 69 +F + PS+C + + LC C + + + + + Sbjct: 20 QRVFRLLLPSLCLVCAEAGTADGDLCPSCRAALP-DHGHACLCCATQLFASDGVALCGQC 78 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRVLEKI 119 +Q+ PL ++ + Y L+R K+H DLA ++++ M R ++ Sbjct: 79 LQEPPPLQRVHACFTYRWPVDGLLRRFKFH--QDLAAGRLLSELMARRCVEL 128 >gi|12518043|gb|AAG58514.1|AE005563_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|13363729|dbj|BAB37678.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|209756448|gb|ACI76536.1| hypothetical protein ECs4254 [Escherichia coli] gi|209756450|gb|ACI76537.1| hypothetical protein ECs4254 [Escherichia coli] gi|209756452|gb|ACI76538.1| hypothetical protein ECs4254 [Escherichia coli] gi|209756454|gb|ACI76539.1| hypothetical protein ECs4254 [Escherichia coli] gi|209756456|gb|ACI76540.1| hypothetical protein ECs4254 [Escherichia coli] Length = 243 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 84 ADYAPPLSLLIHQLKFSRRSEI 105 >gi|189401819|ref|ZP_02778173.2| protein GntX [Escherichia coli O157:H7 str. EC4401] gi|189405505|ref|ZP_02822191.2| protein GntX [Escherichia coli O157:H7 str. EC508] gi|189358967|gb|EDU77386.1| protein GntX [Escherichia coli O157:H7 str. EC4401] gi|189380059|gb|EDU98475.1| protein GntX [Escherichia coli O157:H7 str. EC508] gi|320191575|gb|EFW66225.1| gluconate periplasmic binding protein [Escherichia coli O157:H7 str. EC1212] gi|326337623|gb|EGD61458.1| gluconate periplasmic binding protein [Escherichia coli O157:H7 str. 1044] gi|326344626|gb|EGD68375.1| gluconate periplasmic binding protein [Escherichia coli O157:H7 str. 1125] Length = 215 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 56 ADYAPPLSLLIHQLKFSRRSEI 77 >gi|187775692|ref|ZP_02992680.1| protein GntX [Escherichia coli O157:H7 str. EC4196] gi|188024504|ref|ZP_02772131.2| protein GntX [Escherichia coli O157:H7 str. EC4113] gi|189010096|ref|ZP_02804504.2| protein GntX [Escherichia coli O157:H7 str. EC4076] gi|189402773|ref|ZP_02790768.2| protein GntX [Escherichia coli O157:H7 str. EC4486] gi|189403746|ref|ZP_02784445.2| protein GntX [Escherichia coli O157:H7 str. EC4501] gi|189404697|ref|ZP_02810225.2| protein GntX [Escherichia coli O157:H7 str. EC869] gi|208809535|ref|ZP_03251872.1| protein GntX [Escherichia coli O157:H7 str. EC4206] gi|208813850|ref|ZP_03255179.1| protein GntX [Escherichia coli O157:H7 str. EC4045] gi|208821693|ref|ZP_03262013.1| protein GntX [Escherichia coli O157:H7 str. EC4042] gi|209396165|ref|YP_002272849.1| protein GntX [Escherichia coli O157:H7 str. EC4115] gi|217324234|ref|ZP_03440318.1| protein GntX [Escherichia coli O157:H7 str. TW14588] gi|187771691|gb|EDU35535.1| protein GntX [Escherichia coli O157:H7 str. EC4196] gi|188018351|gb|EDU56473.1| protein GntX [Escherichia coli O157:H7 str. EC4113] gi|189002345|gb|EDU71331.1| protein GntX [Escherichia coli O157:H7 str. EC4076] gi|189364761|gb|EDU83180.1| protein GntX [Escherichia coli O157:H7 str. EC4486] gi|189369879|gb|EDU88295.1| protein GntX [Escherichia coli O157:H7 str. EC4501] gi|189374500|gb|EDU92916.1| protein GntX [Escherichia coli O157:H7 str. EC869] gi|208729336|gb|EDZ78937.1| protein GntX [Escherichia coli O157:H7 str. EC4206] gi|208735127|gb|EDZ83814.1| protein GntX [Escherichia coli O157:H7 str. EC4045] gi|208741816|gb|EDZ89498.1| protein GntX [Escherichia coli O157:H7 str. EC4042] gi|209157565|gb|ACI34998.1| protein GntX [Escherichia coli O157:H7 str. EC4115] gi|217320455|gb|EEC28879.1| protein GntX [Escherichia coli O157:H7 str. TW14588] Length = 248 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 43 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 88 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 89 ADYAPPLSLLIHQLKFSRRSEI 110 >gi|224585305|ref|YP_002639104.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469833|gb|ACN47663.1| putative competence protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 215 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R + R +C C + + +QK P + SV Sbjct: 10 ICSVCARAVRQRVSVCPQC--------------GLPARHPSLPCGRCLQKPPPWQHLVSV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y +LV LK+ R ++ Sbjct: 56 SNYTPPLSLLVHQLKFTRRNEI 77 >gi|331649211|ref|ZP_08350297.1| protein GntX [Escherichia coli M605] gi|331041709|gb|EGI13853.1| protein GntX [Escherichia coli M605] Length = 243 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + +QK P ++ +V Sbjct: 38 ICSVCSRAARTDKTLCPQC--------GLPATYS------HLPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105 >gi|282877098|ref|ZP_06285940.1| ComF family protein [Prevotella buccalis ATCC 35310] gi|281300780|gb|EFA93107.1| ComF family protein [Prevotella buccalis ATCC 35310] Length = 231 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 10/100 (10%) Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + S I + I P C R + LC C + T + D D + Sbjct: 1 MISFISRILDLISPRTCVECRRRLTEGEQVLCASCNLHLP---RTHY----EDDAYDNEM 53 Query: 67 LKSMQKDLPLTQIRSVTLY--CDMSCVLVRLLKYHDRTDL 104 + +P+ + ++ Y + ++ LKY D ++ Sbjct: 54 AQLFWVRIPIERAAALFFYQARSEASRMIYALKYGDHPEI 93 >gi|331674901|ref|ZP_08375658.1| protein GntX [Escherichia coli TA280] gi|331067810|gb|EGI39208.1| protein GntX [Escherichia coli TA280] Length = 243 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105 >gi|293406991|ref|ZP_06650915.1| gluconate periplasmic binding protein [Escherichia coli FVEC1412] gi|298382733|ref|ZP_06992328.1| gluconate periplasmic binding protein [Escherichia coli FVEC1302] gi|291425802|gb|EFE98836.1| gluconate periplasmic binding protein [Escherichia coli FVEC1412] gi|298276569|gb|EFI18087.1| gluconate periplasmic binding protein [Escherichia coli FVEC1302] Length = 215 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77 >gi|160893717|ref|ZP_02074501.1| hypothetical protein CLOL250_01271 [Clostridium sp. L2-50] gi|156864702|gb|EDO58133.1| hypothetical protein CLOL250_01271 [Clostridium sp. L2-50] Length = 240 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 4/94 (4%) Query: 13 IELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNK--DNIDKDPLKS 69 L ++P CPI ++ +C + ++T + + + + Sbjct: 9 RTLMDLVFPRRCPICDAVMAYGEQGICNR-HKTLPYVTGPVCMKCGKELSEAEQEYCEDC 67 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 + + V Y + V +KYH++ + Sbjct: 68 RRHTRSFERAYPVFRYEEPVASSVLAIKYHNKRE 101 >gi|284822068|gb|ADB98038.1| gluconate periplasmic binding protein [Escherichia coli] Length = 243 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105 >gi|26110443|gb|AAN82628.1|AE016768_46 Hypothetical protein yhgH [Escherichia coli CFT073] Length = 248 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 43 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 88 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 89 ADYAPPLSPLIHQLKFSRRSEI 110 >gi|117625678|ref|YP_859001.1| gluconate periplasmic binding protein [Escherichia coli APEC O1] gi|81247180|gb|ABB67888.1| conserved hypothetical protein [Shigella boydii Sb227] gi|115514802|gb|ABJ02877.1| conserved hypothetical protein [Escherichia coli APEC O1] Length = 243 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105 >gi|227883547|ref|ZP_04001352.1| competence protein F [Escherichia coli 83972] gi|227839426|gb|EEJ49892.1| competence protein F [Escherichia coli 83972] gi|320185944|gb|EFW60693.1| gluconate periplasmic binding protein [Shigella flexneri CDC 796-83] gi|332090224|gb|EGI95322.1| protein gntX [Shigella boydii 3594-74] Length = 215 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77 >gi|237703143|ref|ZP_04533624.1| gluconate periplasmic binding protein [Escherichia sp. 3_2_53FAA] gi|91074462|gb|ABE09343.1| hypothetical protein YhgH [Escherichia coli UTI89] gi|226902407|gb|EEH88666.1| gluconate periplasmic binding protein [Escherichia sp. 3_2_53FAA] Length = 248 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 43 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 88 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 89 ADYAPPLSPLIHQLKFSRRSEI 110 >gi|254796780|ref|YP_003081617.1| putative competence protein F [Neorickettsia risticii str. Illinois] gi|254590018|gb|ACT69380.1| putative competence protein F [Neorickettsia risticii str. Illinois] Length = 269 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 44/115 (38%), Gaps = 6/115 (5%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYS---RIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 ++ +K ++P C I S ++ + +C C +++H + H K Sbjct: 30 TVRLIKCTFKSFLTFLFPDCCIICSSKEELVE--YGMCKPCRNEVHLLKDHLHCYCCGKK 87 Query: 61 N-IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + + ++V +Y ++ +K+HD T + +A+ + R Sbjct: 88 MKTSNLCITCAASKPKFDEAKAVFVYNAYVSAFMQKIKFHDGTFITKSLAKMILR 142 >gi|323162798|gb|EFZ48635.1| protein gntX [Escherichia coli E128010] gi|323944365|gb|EGB40440.1| comF family protein [Escherichia coli H120] Length = 215 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77 >gi|58699163|ref|ZP_00373983.1| putative amidophosphoribosyltransferase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534319|gb|EAL58498.1| putative amidophosphoribosyltransferase [Wolbachia endosymbiont of Drosophila ananassae] Length = 194 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%) Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 K + P +RSV Y S ++ K+ D + + A+W+ + + Sbjct: 12 CGKCIINPPPFKVLRSVFAYDQHSRNMIINFKFFDNLNYVKIYAKWIHQANQD 64 >gi|323966226|gb|EGB61662.1| comF family protein [Escherichia coli M863] gi|327251049|gb|EGE62742.1| protein gntX [Escherichia coli STEC_7v] Length = 227 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R ++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRCEI 89 >gi|320639695|gb|EFX09289.1| DNA utilization protein GntX [Escherichia coli O157:H7 str. G5101] Length = 227 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 68 ADYAPPLSLLIHQLKFSRRSEI 89 >gi|313905062|ref|ZP_07838432.1| competence protein ComFC [Eubacterium cellulosolvens 6] gi|313470132|gb|EFR65464.1| competence protein ComFC [Eubacterium cellulosolvens 6] Length = 238 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 3/102 (2%) Query: 12 IIELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKD--PLK 68 + +YP CP+ R++ +C C K+ +I + + + Sbjct: 4 FSRISELLYPRHCPVCDRLLAGNEPYICRKCAGKVKWIRGPVCMKCGRPLDAENKEYCDN 63 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 ++ + + +Y + + KY R + A A+ Sbjct: 64 CRRRSHLYERNLAPFVYGNEIQTSIMRFKYGGRAEYAAFYAK 105 >gi|215488694|ref|YP_002331125.1| gluconate periplasmic binding protein [Escherichia coli O127:H6 str. E2348/69] gi|215266766|emb|CAS11206.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli O127:H6 str. E2348/69] Length = 227 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|110643646|ref|YP_671376.1| gluconate periplasmic binding protein [Escherichia coli 536] gi|191171572|ref|ZP_03033120.1| protein GntX [Escherichia coli F11] gi|300987299|ref|ZP_07178107.1| ComF family protein [Escherichia coli MS 200-1] gi|110345238|gb|ABG71475.1| putative amidophosphoribosyltransferase [Escherichia coli 536] gi|190908199|gb|EDV67790.1| protein GntX [Escherichia coli F11] gi|300306167|gb|EFJ60687.1| ComF family protein [Escherichia coli MS 200-1] gi|324014595|gb|EGB83814.1| ComF family protein [Escherichia coli MS 60-1] Length = 227 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|161367506|ref|NP_289953.2| gluconate periplasmic binding protein [Escherichia coli O157:H7 EDL933] gi|162139751|ref|NP_312282.2| gluconate periplasmic binding protein [Escherichia coli O157:H7 str. Sakai] gi|195934902|ref|ZP_03080284.1| gluconate periplasmic binding protein [Escherichia coli O157:H7 str. EC4024] gi|254795328|ref|YP_003080165.1| gluconate periplasmic binding protein [Escherichia coli O157:H7 str. TW14359] gi|261224694|ref|ZP_05938975.1| gluconate periplasmic binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261254411|ref|ZP_05946944.1| gluconate periplasmic binding protein [Escherichia coli O157:H7 str. FRIK966] gi|291284749|ref|YP_003501567.1| gluconate periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] gi|51701438|sp|Q8X715|GNTX_ECO57 RecName: Full=Protein GntX gi|254594728|gb|ACT74089.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli O157:H7 str. TW14359] gi|290764622|gb|ADD58583.1| gluconate periplasmic binding protein [Escherichia coli O55:H7 str. CB9615] gi|320645193|gb|EFX14209.1| DNA utilization protein GntX [Escherichia coli O157:H- str. 493-89] gi|320650504|gb|EFX18970.1| DNA utilization protein GntX [Escherichia coli O157:H- str. H 2687] gi|320655696|gb|EFX23619.1| DNA utilization protein GntX [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661480|gb|EFX28895.1| DNA utilization protein GntX [Escherichia coli O55:H7 str. USDA 5905] gi|320666503|gb|EFX33486.1| DNA utilization protein GntX [Escherichia coli O157:H7 str. LSU-61] Length = 227 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 68 ADYAPPLSLLIHQLKFSRRSEI 89 >gi|15806406|ref|NP_295112.1| competence protein ComF [Deinococcus radiodurans R1] gi|6459142|gb|AAF10957.1|AE001984_7 competence protein ComF, putative [Deinococcus radiodurans R1] Length = 219 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 16/99 (16%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 +I+L + P CP + LC C +++ PL + Sbjct: 14 MIDLLRVLLPRACPGCGAQLGRAAGLCDRCRAELR------------PRVERHSPLSAQA 61 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 +T R Y + VR LKY D+A + + Sbjct: 62 TPHLVTLGR----YQGVPRRAVRALKYGGARDVAGPLGR 96 >gi|114321584|ref|YP_743267.1| competence protein F [Alkalilimnicola ehrlichii MLHE-1] gi|114227978|gb|ABI57777.1| competence protein F [Alkalilimnicola ehrlichii MLHE-1] Length = 262 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 22/94 (23%), Gaps = 4/94 (4%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILK---NNKDNIDKD 65 I +YP C + LC C + + ++ D Sbjct: 9 RAIGHGLDRLYPPRCVLCGEPGQPPALDLCAGCQADLPWVVNPCARCGQPLPEDSAADGL 68 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + Y LV K+H Sbjct: 69 CADCLCWPPRFDKAVVPLDYRFPVDRLVTGFKFH 102 >gi|188994134|ref|YP_001928386.1| probable amidophosphoribosyl-transferase [Porphyromonas gingivalis ATCC 33277] gi|188593814|dbj|BAG32789.1| probable amidophosphoribosyl-transferase [Porphyromonas gingivalis ATCC 33277] Length = 246 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 42/113 (37%), Gaps = 13/113 (11%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKI-HFITATEHILKNNKD 60 + ++ +I ++ +P CP+ ++ +C C ++ +I ++ L Sbjct: 7 GTGRHIRLLIRKVLDLFFPRYCPVCDSLLAETEIGVCPRCMVRMPRYIEGMQYGLDRLNG 66 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 ++ D L + + ++ LKY +++ M+ + M Sbjct: 67 DVYIDALYGLFI---FKE-------DGGVRPMIHALKYGGYSEIGEMLGR-MA 108 >gi|88855604|ref|ZP_01130267.1| competence protein F [marine actinobacterium PHSC20C1] gi|88814928|gb|EAR24787.1| competence protein F [marine actinobacterium PHSC20C1] Length = 237 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 22/112 (19%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 ++ + + + + P C R LC C + I Sbjct: 3 AALREAVRDAWSLLMPVECAGCQRH---DLSLCKEC----------------AECLIAAP 43 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 ++ + + Y ++ K RTD A ++Q + L Sbjct: 44 ---TIHATPRGLRTYAAVRYEGRVRRVILAFKNQHRTDQARPLSQALLPALR 92 >gi|313158283|gb|EFR57685.1| comF family protein [Alistipes sp. HGB5] Length = 240 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 11/111 (9%) Query: 11 IIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 ++ ++ +P CP+ + +C C T L D L Sbjct: 7 LLSDVAALFFPPRCPVCGVPLAQGERTVCTLC--------RTTAPLTGFWLEADNPLLAK 58 Query: 70 MQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + LP+ + Y S L+R KY A M +W R L++ Sbjct: 59 CRDMLPVERASGFLYYIHGSGWRELIRGFKYRGAWRTARAMGEWYGRCLKE 109 >gi|300919300|ref|ZP_07135814.1| ComF family protein [Escherichia coli MS 115-1] gi|300413615|gb|EFJ96925.1| ComF family protein [Escherichia coli MS 115-1] Length = 227 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|293412831|ref|ZP_06655499.1| gluconate periplasmic binding protein [Escherichia coli B354] gi|300907443|ref|ZP_07125090.1| ComF family protein [Escherichia coli MS 84-1] gi|301302292|ref|ZP_07208424.1| ComF family protein [Escherichia coli MS 124-1] gi|291468478|gb|EFF10971.1| gluconate periplasmic binding protein [Escherichia coli B354] gi|300400858|gb|EFJ84396.1| ComF family protein [Escherichia coli MS 84-1] gi|300842455|gb|EFK70215.1| ComF family protein [Escherichia coli MS 124-1] gi|315256004|gb|EFU35972.1| ComF family protein [Escherichia coli MS 85-1] Length = 227 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|218707004|ref|YP_002414523.1| gluconate periplasmic binding protein [Escherichia coli UMN026] gi|300898898|ref|ZP_07117199.1| ComF family protein [Escherichia coli MS 198-1] gi|331665019|ref|ZP_08365920.1| protein GntX [Escherichia coli TA143] gi|218434101|emb|CAR15018.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli UMN026] gi|284923405|emb|CBG36499.1| putative competence protein [Escherichia coli 042] gi|300357460|gb|EFJ73330.1| ComF family protein [Escherichia coli MS 198-1] gi|331057529|gb|EGI29515.1| protein GntX [Escherichia coli TA143] Length = 227 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|330909446|gb|EGH37960.1| hypothetical protein ECAA86_03648 [Escherichia coli AA86] Length = 227 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------GLPATYS------HLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|225023962|ref|ZP_03713154.1| hypothetical protein EIKCOROL_00829 [Eikenella corrodens ATCC 23834] gi|224942987|gb|EEG24196.1| hypothetical protein EIKCOROL_00829 [Eikenella corrodens ATCC 23834] Length = 302 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 4/94 (4%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + + LCG C + + L +K P TQ+ Sbjct: 84 RCILCHEL-SGSQSLCGGCTADLHCLRLDARRRCPLCAGISASGLPCGHCQRKPPPQTQL 142 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y L+ K+ R DL +A+ M Sbjct: 143 NAAFAYRPPLSNLLYAYKFLGRNDLYAALAELML 176 >gi|312797394|ref|YP_004030316.1| Amidophosphoribosyltransferase family protein [Burkholderia rhizoxinica HKI 454] gi|312169169|emb|CBW76172.1| Amidophosphoribosyltransferase family protein [Burkholderia rhizoxinica HKI 454] Length = 317 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 8/119 (6%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHFITATEHILKNNKD 60 + ++S+ + P+ C + + LC C W++ Sbjct: 83 VAKLRSLCHSAWRHALPTQCALCGNL--SHDVLCDACDEIYWNEARL--RCPRCALPLPR 138 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 N+ +Q ++ Y LV LK+ R +L A+ + + + Sbjct: 139 NVATHCSFCVQTRPAFDATVTLADYAPPLDQLVADLKFRSRIELGRDFARRLALASQDL 197 >gi|301019566|ref|ZP_07183728.1| ComF family protein [Escherichia coli MS 69-1] gi|300399191|gb|EFJ82729.1| ComF family protein [Escherichia coli MS 69-1] Length = 227 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRASRSDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|160891529|ref|ZP_02072532.1| hypothetical protein BACUNI_03981 [Bacteroides uniformis ATCC 8492] gi|317478364|ref|ZP_07937528.1| comF family protein [Bacteroides sp. 4_1_36] gi|156858936|gb|EDO52367.1| hypothetical protein BACUNI_03981 [Bacteroides uniformis ATCC 8492] gi|316905523|gb|EFV27313.1| comF family protein [Bacteroides sp. 4_1_36] Length = 234 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 19/115 (16%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 T K+ + H +P C + + +C C + + N Sbjct: 3 NTFKAWFLSFVHLFFPRQCAVCGSSLQEGEEGICIRC------------NMNMPRTNYHL 50 Query: 65 DPLKSMQK----DLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 S+++ +PL + S Y S ++ LKY R DL +M ++M Sbjct: 51 REDNSVERMFWGKIPLERGTSFFYYHKGSDFRHILHQLKYGGRKDLGEIMGRFMA 105 >gi|189465282|ref|ZP_03014067.1| hypothetical protein BACINT_01628 [Bacteroides intestinalis DSM 17393] gi|189437556|gb|EDV06541.1| hypothetical protein BACINT_01628 [Bacteroides intestinalis DSM 17393] Length = 234 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 11/111 (9%) Query: 6 QTVKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 TVK + LFH +P C + ++ +C HC I KDN+ Sbjct: 3 NTVKIWLGPLFHLFFPRCCVVCGAPLVEGEEAICTHC-----NINMPRTNYHKVKDNL-- 55 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 + +PL + S Y S ++ KY R +L +M ++M Sbjct: 56 -VERIFWGKIPLERATSYFFYRKGSDFRKILHQFKYGGRKELGAIMGRFMA 105 >gi|157158776|ref|YP_001464871.1| gluconate periplasmic binding protein [Escherichia coli E24377A] gi|157080806|gb|ABV20514.1| protein GntX [Escherichia coli E24377A] Length = 227 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|193061813|ref|ZP_03042910.1| protein GntX [Escherichia coli E22] gi|194427043|ref|ZP_03059595.1| protein GntX [Escherichia coli B171] gi|260846197|ref|YP_003223975.1| gluconate periplasmic binding protein GntX [Escherichia coli O103:H2 str. 12009] gi|192932603|gb|EDV85200.1| protein GntX [Escherichia coli E22] gi|194415004|gb|EDX31274.1| protein GntX [Escherichia coli B171] gi|257761344|dbj|BAI32841.1| gluconate periplasmic binding protein GntX [Escherichia coli O103:H2 str. 12009] Length = 227 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|331685055|ref|ZP_08385641.1| protein GntX [Escherichia coli H299] gi|331077426|gb|EGI48638.1| protein GntX [Escherichia coli H299] Length = 227 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|161486090|ref|NP_756054.2| gluconate periplasmic binding protein [Escherichia coli CFT073] gi|161984841|ref|YP_409717.2| gluconate periplasmic binding protein [Shigella boydii Sb227] gi|162138354|ref|YP_542874.2| gluconate periplasmic binding protein [Escherichia coli UTI89] gi|218560471|ref|YP_002393384.1| gluconate periplasmic binding protein [Escherichia coli S88] gi|218702158|ref|YP_002409787.1| gluconate periplasmic binding protein [Escherichia coli IAI39] gi|293416815|ref|ZP_06659452.1| gluconate periplasmic binding protein [Escherichia coli B185] gi|300937288|ref|ZP_07152131.1| ComF family protein [Escherichia coli MS 21-1] gi|301050375|ref|ZP_07197264.1| ComF family protein [Escherichia coli MS 185-1] gi|331659702|ref|ZP_08360640.1| protein GntX [Escherichia coli TA206] gi|51701423|sp|Q8FCT3|GNTX_ECOL6 RecName: Full=Protein GntX gi|218367240|emb|CAR05014.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli S88] gi|218372144|emb|CAR20006.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli IAI39] gi|291431391|gb|EFF04376.1| gluconate periplasmic binding protein [Escherichia coli B185] gi|294492334|gb|ADE91090.1| protein GntX [Escherichia coli IHE3034] gi|300298004|gb|EFJ54389.1| ComF family protein [Escherichia coli MS 185-1] gi|300457647|gb|EFK21140.1| ComF family protein [Escherichia coli MS 21-1] gi|307555499|gb|ADN48274.1| protein GntX [Escherichia coli ABU 83972] gi|307628475|gb|ADN72779.1| gluconate periplasmic binding protein [Escherichia coli UM146] gi|315286087|gb|EFU45525.1| ComF family protein [Escherichia coli MS 110-3] gi|315291746|gb|EFU51102.1| ComF family protein [Escherichia coli MS 153-1] gi|315295926|gb|EFU55235.1| ComF family protein [Escherichia coli MS 16-3] gi|323950070|gb|EGB45953.1| comF family protein [Escherichia coli H252] gi|323954650|gb|EGB50432.1| comF family protein [Escherichia coli H263] gi|324009391|gb|EGB78610.1| ComF family protein [Escherichia coli MS 57-2] gi|331052917|gb|EGI24950.1| protein GntX [Escherichia coli TA206] gi|332345366|gb|AEE58700.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 227 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|110639861|ref|YP_680071.1| amidophosphoribosyltransferase [Cytophaga hutchinsonii ATCC 33406] gi|110282542|gb|ABG60728.1| amidophosphoribosyltransferase [Cytophaga hutchinsonii ATCC 33406] Length = 236 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 15/124 (12%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNK 59 M I +++ + L ++P C + ++ +C C S L Sbjct: 1 MKKIFKSIANSANCLADVLFPPHCLVCDSGLVLGETDVCSTCLS----------TLPTVN 50 Query: 60 DNIDKDPL---KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA-IMMAQWMFRV 115 D+ D L S++ + + + ++ +KY D D+A + W R+ Sbjct: 51 DDYSPDSLYLRLSIELRPSFVWAYLLFDSKNKTQKILHAIKYGDAPDIAVRLAMIWTDRI 110 Query: 116 LEKI 119 E + Sbjct: 111 RESL 114 >gi|222035114|emb|CAP77859.1| Protein gntX [Escherichia coli LF82] gi|312947961|gb|ADR28788.1| gluconate periplasmic binding protein [Escherichia coli O83:H1 str. NRG 857C] Length = 227 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|270295382|ref|ZP_06201583.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274629|gb|EFA20490.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 234 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 33/103 (32%), Gaps = 11/103 (10%) Query: 14 ELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 H +P C + I+ +C C + N D + Sbjct: 11 SFVHLFFPRQCAVCGAILQEGEEGICMKCNMDM--------PRTNYHLRKDNPVERMFWG 62 Query: 73 DLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +PL S Y S ++ LKY R DL +M Q+M Sbjct: 63 KIPLEHATSCFFYHKGSDFRRILHQLKYGGRKDLGEVMGQFMA 105 >gi|298206933|ref|YP_003715112.1| putative amidophosphoribosyl-transferase [Croceibacter atlanticus HTCC2559] gi|83849567|gb|EAP87435.1| putative amidophosphoribosyl-transferase [Croceibacter atlanticus HTCC2559] Length = 226 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 15/108 (13%) Query: 11 IIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIH----FITATEHILKNNKDNIDKD 65 +I + ++P+ C + + + LC C + F + + K + + Sbjct: 1 MINDFIQLLFPNACVVCNATLPKDLNTLCVACSDDLPEAPMFYNSPTQVEKMFYGRLPLE 60 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 S+ + + L+ LKY ++ + +WM Sbjct: 61 HGVSLLT---FEK-------KGTTQKLMHQLKYRGDEQISEYLGKWMA 98 >gi|224368951|ref|YP_002603115.1| ComF [Desulfobacterium autotrophicum HRM2] gi|223691668|gb|ACN14951.1| ComF [Desulfobacterium autotrophicum HRM2] Length = 291 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 28/141 (19%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRII-------------------NLRFCLCGHCWS 43 A+I+ + + ++P C + I L +C C Sbjct: 18 ALIRCLTRLGRGALTALFPDKCLVCGAYIRCLHDLAPVSDNLEALFESTLARVVCSKCLE 77 Query: 44 K--IHFIT------ATEHILKNNKDNIDKDPLKSMQKDLPLT-QIRSVTLYCDMSCVLVR 94 + + + + ++++ D +K+ Q + + R+ + + LV Sbjct: 78 QGFTPVLPPLCTCCGKPFLSRAGENHLCFDCIKAAQTGRFMVGRARAFAAHDLLLRDLVH 137 Query: 95 LLKYHDRTDLAIMMAQWMFRV 115 L KY + LA + + MF Sbjct: 138 LFKYGKKICLARPLGRLMFHA 158 >gi|312879804|ref|ZP_07739604.1| phosphoribosyltransferase [Aminomonas paucivorans DSM 12260] gi|310783095|gb|EFQ23493.1| phosphoribosyltransferase [Aminomonas paucivorans DSM 12260] Length = 219 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 11/103 (10%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 + I L H ++P CP+ R+ + C C + A +L Sbjct: 1 MHPWIAPLLHLLWPCSCPVCGRVGEVA---CPPCLESLVLPLAPHCLLCQGPF----PCP 53 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + L+ + LV LLKY L + M + Sbjct: 54 RHPRAPGVFP----GVLHEGKARELVHLLKYEGWKALGVPMGR 92 >gi|329956624|ref|ZP_08297197.1| comF family protein [Bacteroides clarus YIT 12056] gi|328523996|gb|EGF51072.1| comF family protein [Bacteroides clarus YIT 12056] Length = 234 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 11/111 (9%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 T+K+ + H + C + + +C C + D Sbjct: 3 NTLKTWFLSFLHLFFSRQCAVCGTPLQEGEEAICLKC--------NMNLPRTDYHLRTDN 54 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 + LPL + S Y S ++ LKY R DL M ++M Sbjct: 55 PVERMFWGKLPLERATSYFFYHKGSDFRRILHQLKYGGRKDLGETMGRFMA 105 >gi|217969957|ref|YP_002355191.1| competence protein F [Thauera sp. MZ1T] gi|217507284|gb|ACK54295.1| putative competence protein F [Thauera sp. MZ1T] Length = 228 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 26/103 (25%), Gaps = 1/103 (0%) Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLP 75 + P C + +C C ++ +T + Sbjct: 1 MDVLAPQDCFVCGATSGGE-AVCAACADELPRRPSTACPQCGLPGLDGGRCGACRRSAPA 59 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 R+V + ++ LKY + + + + R Sbjct: 60 FDATRAVFDFAFPVDAMIHALKYRHQLAVGRYLGDALARCGAD 102 >gi|307611175|emb|CBX00819.1| hypothetical protein LPW_25231 [Legionella pneumophila 130b] Length = 234 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 3/97 (3%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITA--TEHILKNNKDNIDKDPLKSMQKDLPLTQ 78 PSIC + ++ + +C +C + I + + D + ++K + Sbjct: 15 PSICTLCNQFHKSQLAVCSNCMEFMKQIGSCCQYCAYPLSDDTY-LVCGQCVRKRPSFDR 73 Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + L+ KYH+ LA + Q + Sbjct: 74 AYIAYRFEEPLRSLIHQFKYHNGLYLASFLKQLLLNA 110 >gi|229592992|ref|YP_002875111.1| hypothetical protein PFLU5616 [Pseudomonas fluorescens SBW25] gi|229364858|emb|CAY52911.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 245 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 29/87 (33%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + C+C C +++ ++ + + ++ Q+ + Sbjct: 21 CLVCDEATESAHCVCNACETELPWLMEHCDVCALPLPMEGLICGQCQKQPPAFKQVTAPW 80 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 Y L+ K+ R L M+A+ Sbjct: 81 TYSFPIDSLISRFKHQARWPLGQMLAR 107 >gi|206900712|ref|YP_002251126.1| hypothetical protein DICTH_1306 [Dictyoglomus thermophilum H-6-12] gi|206739815|gb|ACI18873.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12] Length = 231 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 4/97 (4%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKD 73 LF ++P+ C + +C C+ K+ F + + ++ Sbjct: 9 LFEILFPTRCIFCGKY--SEGFVCKSCFEKLKF-PKNYCGMCGRPLTGSLEICYNCSKEK 65 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 V Y M ++ K+ ++ LA ++Q Sbjct: 66 KVWDSYEFVAYYDGMWKEIIASFKFKNKPYLADFISQ 102 >gi|325282919|ref|YP_004255460.1| phosphoribosyltransferase [Deinococcus proteolyticus MRP] gi|324314728|gb|ADY25843.1| phosphoribosyltransferase [Deinococcus proteolyticus MRP] Length = 217 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 16/104 (15%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 + P CP + LC HC + + PL Q Sbjct: 10 LAHWLRLALPRACPGCGGQLGQAAGLCWHCRAGLR------------PRVERHSPLSPFQ 57 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + +T R Y VR LKY ++A ++ + Sbjct: 58 EPHLVTLGR----YQGPVRRAVRALKYGQAREVAPVLGGLLASA 97 >gi|88608634|ref|YP_506302.1| putative competence protein F [Neorickettsia sennetsu str. Miyayama] gi|88600803|gb|ABD46271.1| putative competence protein F [Neorickettsia sennetsu str. Miyayama] Length = 270 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 6/103 (5%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYS---RIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 ++ +KS ++P C I S ++ C+C C +++H + H K Sbjct: 31 TLRLIKSTFKSFLTFLFPDCCIICSSEEELVE--HCMCKPCRNEVHLLKDHLHCYCCGKK 88 Query: 61 N-IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102 + + ++V +Y V ++ +K+HD T Sbjct: 89 MKTSNLCITCAASKPKFNEAKAVFVYNAYVSVFMQKIKFHDGT 131 >gi|27372295|dbj|BAC53659.1| competence protein F [Serratia marcescens] Length = 120 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + ++ +R LC C + + +Q+ P ++ Sbjct: 7 RCWLCRQPLSLMRHGLCSCCLRHLP--ARPPCCPRCGLPAGETRTPCGRCLQRPPPWQRL 64 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 V Y LV+ K+H +LA +A+ M Sbjct: 65 VFVGDYVTPLSGLVKRFKFHRAPELAPALARLML 98 >gi|238921501|ref|YP_002935016.1| hypothetical protein NT01EI_3653 [Edwardsiella ictaluri 93-146] gi|238871070|gb|ACR70781.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 226 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 31/91 (34%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C I + +C C + +I + + + P ++ V Sbjct: 7 RCAICLLPLRAPVGICSACRRALPAPPPCCPRCGLPSADIHHPCGRCLLRPPPWQRLTFV 66 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y LV+ LKY LA+ +A+ M Sbjct: 67 SGYLPPLAPLVQRLKYRAEWPLAVPLARLML 97 >gi|91203265|emb|CAJ72904.1| similar to competence protein F [Candidatus Kuenenia stuttgartiensis] Length = 249 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 8/103 (7%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLR--FCLCGHCWSKIHFITATEHILKNNKDN 61 ++ + + + L YP IC R IN +CG C I F+ I + Sbjct: 1 MLNAINNYVQALLDVFYPRICLYCHRNINYHCEQYICGTCRKNIPFVNERHCIRCGSVLG 60 Query: 62 ID------KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 K + L + ++ Y L+ KY Sbjct: 61 QYSVASEVKGCAFCRSEHLYHDSLTAIAYYDGAIKALIHKYKY 103 >gi|300725235|ref|YP_003714563.1| putative periplasmic gluconate-binding protein in GNT I transport system [Xenorhabdus nematophila ATCC 19061] gi|297631780|emb|CBJ92499.1| putative periplasmic gluconate-binding protein in GNT I transport system [Xenorhabdus nematophila ATCC 19061] Length = 227 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 30/78 (38%) Query: 33 LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVL 92 +C C+ + + + + D + ++ P + ++T Y L Sbjct: 18 AHHGICHVCYRYLKRLQSVCPRCALPSQSRDVPCGRCLKNPPPWQHLIAITDYAPPLSQL 77 Query: 93 VRLLKYHDRTDLAIMMAQ 110 +R KYH LA ++A+ Sbjct: 78 IRRYKYHSTPQLAPVLAR 95 >gi|289423614|ref|ZP_06425414.1| phosphoribosyltransferase [Peptostreptococcus anaerobius 653-L] gi|289155982|gb|EFD04647.1| phosphoribosyltransferase [Peptostreptococcus anaerobius 653-L] Length = 273 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 11/108 (10%) Query: 9 KSIIIELFHCIYPS--ICPIYSRIINLR--FCLCGHCWSKIHFI-------TATEHILKN 57 K+ I + IYP C I+ + +C C+ ++ FI Sbjct: 17 KNFIRLILDIIYPQNLSCVFCKMPISRSNKYSVCKSCYDQMVFIINACPKCGKPIINTSL 76 Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 DN D K + S Y D S LV LKY+ +T LA Sbjct: 77 KNDNDILDCDYCRNKSTIYDRNISFLEYEDKSKHLVFDLKYNSKTFLA 124 >gi|187733952|ref|YP_001882092.1| gluconate periplasmic binding protein [Shigella boydii CDC 3083-94] gi|187430944|gb|ACD10218.1| protein GntX [Shigella boydii CDC 3083-94] Length = 227 Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + +S+QK P ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRSLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|313200347|ref|YP_004039005.1| hypothetical protein MPQ_0587 [Methylovorus sp. MP688] gi|312439663|gb|ADQ83769.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 213 Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 9/80 (11%), Positives = 20/80 (25%) Query: 27 YSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYC 86 + LC C + + A + + ++ Y Sbjct: 2 CTAADGGDLGLCASCQQDLPWHKAPCCPQCALPSSQGLLCGHCLTSPPAFDHTHALLRYD 61 Query: 87 DMSCVLVRLLKYHDRTDLAI 106 +++ KY D +A Sbjct: 62 FPLDAMLQGYKYRDMLHMAR 81 >gi|83589094|ref|YP_429103.1| phosphoribosyltransferase [Moorella thermoacetica ATCC 39073] gi|83572008|gb|ABC18560.1| Phosphoribosyltransferase [Moorella thermoacetica ATCC 39073] Length = 222 Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 4/81 (4%) Query: 34 RFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPLTQIRSVTLYCDMS 89 R C C +++ H + + + ++ P + R+V Y + Sbjct: 3 RGLFCPQCHQELYSWQEKYHPCRYCGRLLAAGGGAVCRQCREELPPFRRARAVGAYRGIL 62 Query: 90 CVLVRLLKYHDRTDLAIMMAQ 110 L+ KY R LA + Q Sbjct: 63 KELIWAFKYQGRRSLAAPLGQ 83 >gi|119489385|ref|ZP_01622165.1| hypothetical protein L8106_02477 [Lyngbya sp. PCC 8106] gi|119454658|gb|EAW35804.1| hypothetical protein L8106_02477 [Lyngbya sp. PCC 8106] Length = 228 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 19/106 (17%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +++ + + + CP+ R + + LC +C +I L K + PL Sbjct: 2 LRNFFQAVLNLFFKPNCPLCDRPADTQ--LCPYCQKQI-----LRCQLPRGKQFSGEVPL 54 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 Q Y + +KY++ ++A + W+ Sbjct: 55 LV------WGQ------YKGALKQAIVAMKYNNHPEVAQPLGYWLA 88 >gi|302338535|ref|YP_003803741.1| phosphoribosyltransferase [Spirochaeta smaragdinae DSM 11293] gi|301635720|gb|ADK81147.1| phosphoribosyltransferase [Spirochaeta smaragdinae DSM 11293] Length = 250 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 19/121 (15%) Query: 8 VKSIIIELFHCIYPSICPIYSR-----IINLRFC-------LCGHCWSKIH---FITATE 52 + +++IE ++PS C + R I LC C ++ Sbjct: 1 MDTLLIEALQLLFPSQCLLCGRSYTPDIFPHHGGERWAPVPLCRTCLQELEQELLDQGQG 60 Query: 53 HILKNNKDNIDKD-PLKSMQKDLPLTQIRSVT---LYCDMSCVLVRLLKYHDRTDLAIMM 108 + + +++ + + L RS T LY + L+R K+ +R DLA + Sbjct: 61 CSICGSPLVSEQNICMSCRRHFPSLPSFRSNTPLFLYRGKAKELLRWYKFRNRRDLAPLF 120 Query: 109 A 109 A Sbjct: 121 A 121 >gi|237711581|ref|ZP_04542062.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|265753009|ref|ZP_06088578.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229454276|gb|EEO59997.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263236195|gb|EEZ21690.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 231 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 11/109 (10%) Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + SI +L++ +P C + R +I+ LC C S++ T+ L+ + ++ + Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSRLP---RTQFHLR-KDNIVECNF 56 Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + P+ + S Y L+ LKYH ++ +M + M Sbjct: 57 WGKI----PVERATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101 >gi|320539834|ref|ZP_08039493.1| putative gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Serratia symbiotica str. Tucson] gi|320030020|gb|EFW12040.1| putative gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Serratia symbiotica str. Tucson] Length = 239 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 27/77 (35%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLL 96 LC +C + + + +Q+ P ++ + Y LV+ Sbjct: 34 LCSYCLRHLLAKPLCYPCCALPAGSPLLPCGRCLQQPPPWQRLVFASDYITPLSQLVKRF 93 Query: 97 KYHDRTDLAIMMAQWMF 113 K+ +LA +A+ M Sbjct: 94 KFQHAPELAPTLARLML 110 >gi|212695382|ref|ZP_03303510.1| hypothetical protein BACDOR_04931 [Bacteroides dorei DSM 17855] gi|212662017|gb|EEB22591.1| hypothetical protein BACDOR_04931 [Bacteroides dorei DSM 17855] Length = 104 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 11/109 (10%) Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + SI +L++ +P C + R +I+ LC C S++ T+ L+ + ++ + Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSRLP---RTQFHLR-KDNIVECNF 56 Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + P+ + S Y L+ LKYH ++ +M + M Sbjct: 57 WGKI----PVERATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101 >gi|261409648|ref|YP_003245889.1| amidophosphoribosyltransferase-like protein [Paenibacillus sp. Y412MC10] gi|261286111|gb|ACX68082.1| amidophosphoribosyltransferase-like protein [Paenibacillus sp. Y412MC10] Length = 274 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 4/96 (4%) Query: 23 ICPIYSRIINLRF---CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 IC + + +C C+ +I +I + D + + Sbjct: 11 ICLTCGKTGSCNQELPGICHACYRQIPWIFKPRCLRCGRGIGC-PDCTRLGVNNRSFVLN 69 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 RS Y + KY A ++ + + R Sbjct: 70 RSAVTYDAQMREWLAQYKYRGNERYAPLLVEMLLRA 105 >gi|124268368|ref|YP_001022372.1| putative phosphoribosyl transferase [Methylibium petroleiphilum PM1] gi|124261143|gb|ABM96137.1| putative phosphoribosyl transferase [Methylibium petroleiphilum PM1] Length = 230 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 5/101 (4%) Query: 20 YPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPL 76 +P+ C + +C C F + D ++ P Sbjct: 5 WPNRCAVCHAGTRGAAARICDDC--LTRFAPNVPRCERCALQRPDGVTVCGSCLRNPPPW 62 Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 ++ Y L+ LK+HD DLA +AQ + L+ Sbjct: 63 SRAVVACDYAYPWDGLLNALKFHDAIDLAAPLAQRLALALQ 103 >gi|281180445|dbj|BAI56775.1| conserved hypothetical protein [Escherichia coli SE15] Length = 227 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK LP ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPLPWQRLLTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|331654991|ref|ZP_08355990.1| protein GntX [Escherichia coli M718] gi|331047006|gb|EGI19084.1| protein GntX [Escherichia coli M718] Length = 243 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK P ++ +V Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y +L+ LK+ R+++ Sbjct: 84 ADYAPPLSLLIYQLKFSRRSEI 105 >gi|187922548|ref|YP_001894190.1| phosphoribosyltransferase [Burkholderia phytofirmans PsJN] gi|187713742|gb|ACD14966.1| phosphoribosyltransferase [Burkholderia phytofirmans PsJN] Length = 261 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 11/113 (9%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHFITATEHILKNNKDNIDKD---- 65 + H P++C + + LC C W++ + T + + Sbjct: 27 RVVHAALPNLCALCGNL--SHTTLCAGCDAAYWNESR-MRCTVCAVPLSSSRWAAHSQYR 83 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + + P ++ Y +L LK+ R LA AQ + R+ + Sbjct: 84 CADCIGEPPPFDATFALADYRAPLDMLAVGLKFRARLMLAREFAQRLARLAQD 136 >gi|227546169|ref|ZP_03976218.1| phosphoribosyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621789|ref|ZP_04664820.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|227213150|gb|EEI81022.1| phosphoribosyltransferase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239514980|gb|EEQ54847.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 240 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 21/112 (18%) Query: 2 PAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61 P++ + ++ ++ + ++P C LC CW Sbjct: 4 PSVYKWWHAMWAQVCNLLFPRGCAGCDAP---DEVLCAACW------------------A 42 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + +I S ++Y + K HD T+L + M Sbjct: 43 LFAQCRERDADSGGGARIWSASIYQGAVRRAILDWKDHDDTELDGPFGRIMV 94 >gi|218691689|ref|YP_002399901.1| gluconate periplasmic binding protein [Escherichia coli ED1a] gi|306816249|ref|ZP_07450387.1| gluconate periplasmic binding protein [Escherichia coli NC101] gi|218429253|emb|CAR10064.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Escherichia coli ED1a] gi|305850645|gb|EFM51102.1| gluconate periplasmic binding protein [Escherichia coli NC101] gi|320197372|gb|EFW71987.1| gluconate periplasmic binding protein [Escherichia coli WV_060327] Length = 227 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK LP ++ +V Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPLPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|254881267|ref|ZP_05253977.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254834060|gb|EET14369.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 231 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 11/109 (10%) Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + SI +L++ +P C + R +I+ LC C S + T+ L+ + ++ Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSGLP---RTQFHLR-KDNIVECKF 56 Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + P+ S Y L+ LKYH ++ +M + M Sbjct: 57 WGKI----PVEHATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101 >gi|291615045|ref|YP_003525202.1| phosphoribosyltransferase [Sideroxydans lithotrophicus ES-1] gi|291585157|gb|ADE12815.1| phosphoribosyltransferase [Sideroxydans lithotrophicus ES-1] Length = 238 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 1/86 (1%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + C C +++ + A + +Q+ + Sbjct: 24 CLLCGAA-SHVGLCCAACDTELPRLNAEHCPICALPTPSGSVCGACLQQPPAFDHTVAAF 82 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMA 109 Y L+R LK+H+ L +A Sbjct: 83 SYDFPVDKLIRALKFHEHLALVNHLA 108 >gi|254494988|ref|ZP_01053158.2| predicted amidophosphoribosyl-transferase [Polaribacter sp. MED152] gi|213690570|gb|EAQ42586.2| predicted amidophosphoribosyl-transferase [Polaribacter sp. MED152] Length = 228 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 11/106 (10%) Query: 10 SIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 I+ +L + YP +C + ++++ +C C + L N + + K Sbjct: 2 KILKDLLYLFYPKLCAVCELKLVDNETTICTLCRHDL--------PLTNFTNFRENKVTK 53 Query: 69 SMQKDLPLTQIRSVTLY--CDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + + + ++ Y + L++ LKY + ++ + W+ Sbjct: 54 TFYGRTLIHKGYALLFYRKKGSTRKLIQQLKYRNNEEIGVFFGNWL 99 >gi|147679091|ref|YP_001213306.1| amidophosphoribosyltransferases [Pelotomaculum thermopropionicum SI] gi|146275188|dbj|BAF60937.1| predicted amidophosphoribosyltransferases [Pelotomaculum thermopropionicum SI] Length = 246 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 19/107 (17%) Query: 10 SIIIELFHCIYPSI--CPIYSRIINLRFCLCGHCWSKIHFITATE----------HILKN 57 ++ +L + I+P CP R CG+C + ++ K Sbjct: 3 ALWNDLLNLIFPPAPECPFCGRP-GPPGKACGNC---LAYLEGFRREAHCSRCGRLPGKG 58 Query: 58 NKDNIDKD---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101 + ++ P +R+ Y + + KY R Sbjct: 59 AALFGRGGTRLCGECRAREWPFALVRAAGPYEGIIKEAIHRFKYAGR 105 >gi|294777683|ref|ZP_06743134.1| ComF family protein [Bacteroides vulgatus PC510] gi|319640269|ref|ZP_07994994.1| amidophosphoribosyl-transferase [Bacteroides sp. 3_1_40A] gi|294448751|gb|EFG17300.1| ComF family protein [Bacteroides vulgatus PC510] gi|317388044|gb|EFV68898.1| amidophosphoribosyl-transferase [Bacteroides sp. 3_1_40A] Length = 231 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 11/109 (10%) Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + SI +L++ +P C + R +I+ LC C S + T+ L+ + ++ + Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSGLP---RTQFHLR-KDNIVECNF 56 Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + P+ S Y L+ LKYH ++ +M + M Sbjct: 57 WGKI----PVEHATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101 >gi|317472164|ref|ZP_07931496.1| comF family protein [Anaerostipes sp. 3_2_56FAA] gi|316900568|gb|EFV22550.1| comF family protein [Anaerostipes sp. 3_2_56FAA] Length = 234 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 3/96 (3%) Query: 15 LFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQ 71 ++P CPI ++ N + +C C+ K+ F+ ++ + Sbjct: 5 FLSFLFPRRCPICHHLLKNQQSLICPKCYQKVVFVREPACFCCGKPLENEETELCSDCRK 64 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107 + + +Y + + +KY ++ + A Sbjct: 65 HPKTFKKGIPLCVYNNEVRDSLAAIKYQNQKEYADF 100 >gi|296107921|ref|YP_003619622.1| competence protein ComF [Legionella pneumophila 2300/99 Alcoy] gi|295649823|gb|ADG25670.1| competence protein ComF [Legionella pneumophila 2300/99 Alcoy] Length = 234 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 9/93 (9%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKDLP 75 PSIC + ++ + +C +C I F+ + D + ++K Sbjct: 15 PSICTLCNQFHKSQLAVCSNC---IEFMKQLGSCCQYCAYPLSDDTY-LVCGQCVRKRPS 70 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM 108 + + + L+ KYH+ LA + Sbjct: 71 FDRAYIAYRFEEPLRNLIHQFKYHNGLYLASFL 103 >gi|322690809|ref|YP_004220379.1| hypothetical protein BLLJ_0619 [Bifidobacterium longum subsp. longum JCM 1217] gi|320455665|dbj|BAJ66287.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 240 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 21/112 (18%) Query: 2 PAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61 P++ + ++ ++ + ++P C LC CW Sbjct: 4 PSVYKWWHAMWAQVCNLLFPRGCAGCDAP---DEVLCAACW------------------A 42 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + +I S ++Y + K HD T+L + M Sbjct: 43 LFAQCRERDADSGGGARIWSASIYQGAVRRAILDWKDHDDTELDGPFGRIMV 94 >gi|262382451|ref|ZP_06075588.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295329|gb|EEY83260.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 229 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 11/103 (10%) Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHIL--KNNKDNIDKDPLKSMQ 71 L + +P++C I R ++ +C C + T + I KD ++ Sbjct: 8 LLNLFFPNLCKICKRPLVEGEEQICLKCLCDLPH-TGYHRQANNPVEQLFIGKDRIEYAT 66 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 L + L+ LKYHD +L ++ + + R Sbjct: 67 AYLRYEKG-------GKVQSLIHSLKYHDNKELGYLLGRQIAR 102 >gi|212711653|ref|ZP_03319781.1| hypothetical protein PROVALCAL_02728 [Providencia alcalifaciens DSM 30120] gi|212685755|gb|EEB45283.1| hypothetical protein PROVALCAL_02728 [Providencia alcalifaciens DSM 30120] Length = 227 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 1/89 (1%) Query: 23 ICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81 +C + + + + +C C + + + ID + + + P ++ + Sbjct: 7 VCWLCQQELKVPRQGICSFCTKNLPPMPRVCPQCALTSEYIDASCGRCLLQPPPWQKLIT 66 Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 V+ Y L+ K+H + LA+ + + Sbjct: 67 VSPYRAPLRQLIHQYKFHRQPQLAVALTR 95 >gi|308273050|emb|CBX29654.1| hypothetical protein N47_J06350 [uncultured Desulfobacterium sp.] Length = 276 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 31/125 (24%), Gaps = 34/125 (27%) Query: 17 HCIYPSICPIYS-----------------------------RIINLRFCLCGHCWSKIHF 47 ++PS C + + F LC C Sbjct: 12 KAVFPSKCIVCGSFFHVFSENDPVHQKNYSDKKYEIENITFERVMSPF-LCSSCLVDYLP 70 Query: 48 ITATEHILKNNKD----NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 + + D K ++ + RSV LY ++ KY + Sbjct: 71 VESPFCSSCGIVFKSREGTDHICQKCIEHPKRFGKARSVFLYSKSVMEVIHSFKYKGKLQ 130 Query: 104 LAIMM 108 LA + Sbjct: 131 LADPL 135 >gi|320458782|dbj|BAJ69403.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 240 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 21/112 (18%) Query: 2 PAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61 P++ + + + + ++P C LC CW Sbjct: 4 PSVYKWWHVMWAQACNLLFPRGCAGCDAP---DEVLCAACW------------------A 42 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + +I S ++Y + + K HD T+L + M Sbjct: 43 LFAQCRERDADSGGGARIWSASIYQGAARRAILDWKDHDDTELDGPFGRIMV 94 >gi|166079864|gb|ABY81652.1| ComF [Serratia sp. SES-01] Length = 135 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 5/91 (5%) Query: 23 ICPIYSRIINLRF-CLCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + + L +C +C + + + +Q+ P + Sbjct: 7 RCWLCRQSLRLHGQGICSYCLRHMP--AKPLCCPRCGLPAGDARLPCGRCLQQPPPWQAL 64 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 V Y L++ K+ +LA ++A+ Sbjct: 65 VFVNDYAAPLRQLIKKFKFQHTPELAPLLAR 95 >gi|206579882|ref|YP_002236214.1| protein GntX [Klebsiella pneumoniae 342] gi|206568940|gb|ACI10716.1| protein GntX [Klebsiella pneumoniae 342] Length = 224 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%) Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPL-KSMQKDLPLTQIRSVTLYCDMSCVLVR 94 +C C + + P + +QK P ++ +V Y LV+ Sbjct: 21 GICSRCSRAL-LACPPLCPRCGLPAALSHHPCGRCLQKPPPWHRLVAVNDYRPPLSGLVQ 79 Query: 95 LLKYHDRTDLAI 106 LK+H R +L Sbjct: 80 QLKFHHRPELGP 91 >gi|323182874|gb|EFZ68275.1| protein gntX [Escherichia coli 1357] Length = 215 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + SR LC C + + +QK ++ +V Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPLWQRLVTV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77 >gi|170681819|ref|YP_001745661.1| gluconate periplasmic binding protein [Escherichia coli SMS-3-5] gi|170519537|gb|ACB17715.1| protein GntX [Escherichia coli SMS-3-5] Length = 227 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + S LC C + + +QK P ++ +V Sbjct: 22 ICSVCSLAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y L+ LK+ R+++ Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89 >gi|256839097|ref|ZP_05544607.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256740016|gb|EEU53340.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 229 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 11/103 (10%) Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATE--HILKNNKDNIDKDPLKSMQ 71 L + +P++C I R ++ +C C + T + I KD ++ Sbjct: 8 LLNLFFPNLCKICKRPLVEGEEQICLKCLCDLPH-TGYHQQVNNPVEQLFIGKDRIEYAT 66 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 L + L+ LKYHD +L ++ + + R Sbjct: 67 AYLRYEKG-------GKVQCLIHSLKYHDNKELGYLLGRQIAR 102 >gi|150010263|ref|YP_001305006.1| putative amidophosphoribosyl-transferase [Parabacteroides distasonis ATCC 8503] gi|255012468|ref|ZP_05284594.1| putative amidophosphoribosyl-transferase [Bacteroides sp. 2_1_7] gi|298374642|ref|ZP_06984600.1| competence protein F-related protein [Bacteroides sp. 3_1_19] gi|149938687|gb|ABR45384.1| putative amidophosphoribosyl-transferase [Parabacteroides distasonis ATCC 8503] gi|298269010|gb|EFI10665.1| competence protein F-related protein [Bacteroides sp. 3_1_19] Length = 229 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 11/103 (10%) Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 L + +P++C I R ++ +C C + + + Sbjct: 8 LLNLFFPNLCKICKRPLVEGEEQICLKCLCDL--------PHTGYHQQANNPVEQLFIGK 59 Query: 74 LPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + + Y L+ LKYHD +L ++ + + R Sbjct: 60 NRIEYATAYLRYEKGGKVQSLIHSLKYHDNKELGYLLGRQIAR 102 >gi|226942752|ref|YP_002797825.1| amidophosphoribosyltransferase [Azotobacter vinelandii DJ] gi|226717679|gb|ACO76850.1| amidophosphoribosyltransferase [Azotobacter vinelandii DJ] Length = 238 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 30/91 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + LC C +++ ++ A I D ++ ++ + Sbjct: 14 CLLCDEPAETGLPLCASCEAELPWLGAHCAICALPLPAADLVCGACQKRPPAFDRVEAPW 73 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 Y L+ K+ R L ++ + + R Sbjct: 74 RYAFPVDTLIARFKHQARWPLGRLLGELLAR 104 >gi|28197986|ref|NP_778300.1| competence protein F [Xylella fastidiosa Temecula1] gi|182680612|ref|YP_001828772.1| competence protein F [Xylella fastidiosa M23] gi|28056046|gb|AAO27949.1| competence protein F [Xylella fastidiosa Temecula1] gi|182630722|gb|ACB91498.1| competence protein F [Xylella fastidiosa M23] gi|307579071|gb|ADN63040.1| competence protein F [Xylella fastidiosa subsp. fastidiosa GB514] Length = 241 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 3/107 (2%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPLKSM 70 L + PS C + + LC C + + + I + Sbjct: 18 RLLRWLLPSYCLACNEPGHQGKTLCATCQLLLPRMENACLRCAAPLKELEGIHPTCGPCL 77 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 PL + LY L+ K+H + ++A M + Sbjct: 78 YDPPPLETAHAAFLYHWPINKLISRFKFHQDLECGHLLADNMAMAAQ 124 >gi|282857327|ref|ZP_06266564.1| phosphoribosyltransferase [Pyramidobacter piscolens W5455] gi|282584827|gb|EFB90158.1| phosphoribosyltransferase [Pyramidobacter piscolens W5455] Length = 226 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 9/105 (8%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 ++ L H + P CP+ ++ + LC C K I+A E L + P + Sbjct: 5 PVVELLGHLLMPESCPVCGKLASP---LCPECLGK---ISAPEPPLPHCLRCGGASPCE- 57 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + R++TL+ + L+ +KY A M + R Sbjct: 58 -RHGRRYE-ARALTLHKGEARELLLTVKYGGSGVAAQKMGAALAR 100 >gi|167464398|ref|ZP_02329487.1| ComFC [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382404|ref|ZP_08056307.1| DNA transport apparatus-associated-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153621|gb|EFX46000.1| DNA transport apparatus-associated-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 261 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 10/97 (10%) Query: 9 KSIIIELFHCIYP--SICPIYSRII---NLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 K ++ + P S CP ++ + LC C++ I +I + + Sbjct: 14 KKVLSAAQGLLSPRVSACPGCNQPAVLNTRQMGLCQICYTGIPWIREVICPICGRYE--- 70 Query: 64 KDPLKSMQKDLP-LTQIRSVTLYCDMSCVLVRLLKYH 99 + ++++ + RS Y + L+ KY Sbjct: 71 -ECGDCLRREETCFIRNRSAVRYDESMKELLARYKYR 106 >gi|269140628|ref|YP_003297329.1| putative competence-related protein F [Edwardsiella tarda EIB202] gi|267986289|gb|ACY86118.1| putative competence-related protein F [Edwardsiella tarda EIB202] gi|304560414|gb|ADM43078.1| conserved hypothetical protein [Edwardsiella tarda FL6-60] Length = 226 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 30/91 (32%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C I + +C C + + + + + + ++ V Sbjct: 7 RCAICRLPLRAPVGICSACRRALPIPPPCCPRCGLPSADTQRPCGRCLLRPPLWQRLTFV 66 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y LV+ LKY LA+ +A+ M Sbjct: 67 SDYLPPLAPLVQRLKYRAEWPLAVPLARLML 97 >gi|306820763|ref|ZP_07454389.1| phosphoribosyl transferase, competence protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551212|gb|EFM39177.1| phosphoribosyl transferase, competence protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 222 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 12/99 (12%) Query: 18 CIYPSI--CPIYSRIINLR--FCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 ++P C + I+ F LC +C+ I F L + DK+ ++ ++ D Sbjct: 3 ILFPENIYCISCNEPISDSNKFSLCKNCYENIEF-------LYDKNTIFDKEVMELLKND 55 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 ++++ T+Y D+ ++ +KY ++T LA A M Sbjct: 56 Y-ISKVHITTIYNDIMKNMIHGIKYSNKTYLAKFFASMM 93 >gi|113474722|ref|YP_720783.1| hypothetical protein Tery_0911 [Trichodesmium erythraeum IMS101] gi|110165770|gb|ABG50310.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101] Length = 255 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 18/105 (17%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 + I + + + CP+ R + F C +C ++ + + Sbjct: 7 RKIFKPFLNILLKANCPLCQRSADREF--CQYCEKQV-----WHCQFPGGGEIFSGEVPI 59 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Q Y D + +KY D ++A + W+ Sbjct: 60 FV-----WGQ------YKDSLKRAIAAMKYEDHPEIAKPLGYWLA 93 >gi|108759781|ref|YP_629494.1| ComF domain-containing protein [Myxococcus xanthus DK 1622] gi|108463661|gb|ABF88846.1| ComF domain protein [Myxococcus xanthus DK 1622] Length = 92 Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 26/90 (28%), Gaps = 2/90 (2%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKD-PLK 68 ++ L +YP C ++++ C C + + + + + Sbjct: 1 MLKALLDVLYPPSCLACTKVLPGPEGFFCETCDTAVERLPPACCRTCAEPGAFPGETCPR 60 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 P T+ + + + KY Sbjct: 61 CRATPPPFTRAWAPFAHEGPLARAIHRFKY 90 >gi|295675361|ref|YP_003603885.1| phosphoribosyltransferase [Burkholderia sp. CCGE1002] gi|295435204|gb|ADG14374.1| phosphoribosyltransferase [Burkholderia sp. CCGE1002] Length = 261 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 9/122 (7%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILK 56 + + + S + P++C + + LC C W++ + A Sbjct: 17 VARGLYSAWPRALNVALPNLCALCGNM--SHKTLCDGCDAAYWNESRLRCSVCAVPLPAS 74 Query: 57 NNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 + + P ++ Y L LK+ R LA AQ + R+ Sbjct: 75 RWVAQAGYRCADCVAEPPPFDASFALADYRAPLDTLAVGLKFRARLMLARDFAQRLARLA 134 Query: 117 EK 118 Sbjct: 135 RD 136 >gi|294675033|ref|YP_003575649.1| ComF family protein [Prevotella ruminicola 23] gi|294473458|gb|ADE82847.1| ComF family protein [Prevotella ruminicola 23] Length = 232 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 22/118 (18%) Query: 10 SIIIELFHCIYPSICPIYSRIINL-RFCLCGHCWSKIHF-ITATEHILKNNKDNIDKDPL 67 SI L I P C I R ++ LC C HF + T L D + Sbjct: 5 SIWRRLLDFISPRTCVICGRRLSATEEVLCMKC----HFHLPRTGFWLDP----YDNEMA 56 Query: 68 KSMQKDLPLTQIRSVT-----LYCDMSCVLVRLLKYHDRTD----LAIMMAQWMFRVL 116 KS +P+ R+ + D + ++ LKY D + L M+A+ M Sbjct: 57 KSFWHLIPIE--RAAAYFYYEAHSDTA-NMIYQLKYKDHPEVGVILGRMLAKEMQGAG 111 >gi|54026581|ref|YP_120823.1| hypothetical protein nfa46080 [Nocardia farcinica IFM 10152] gi|54018089|dbj|BAD59459.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 214 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 31/108 (28%), Gaps = 20/108 (18%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 + L + P C R G W + PL+ Sbjct: 1 MRTLLDLVLPVACGGCGRP--------GTPW------------CDACATALAGPPLRLRP 40 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + P +V Y + V LK RTDLA + M L ++ Sbjct: 41 RTDPGVPCWAVARYAGPARRAVLALKERGRTDLAAPLGHAMAGALRRL 88 >gi|150003434|ref|YP_001298178.1| putative amidophosphoribosyl-transferase [Bacteroides vulgatus ATCC 8482] gi|149931858|gb|ABR38556.1| putative amidophosphoribosyl-transferase [Bacteroides vulgatus ATCC 8482] Length = 231 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 11/109 (10%) Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + SI +L++ +P C + R +I+ LC C S + T+ L+ + ++ + Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLRCLSGLP---RTQFHLR-KDNIVECNF 56 Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + P+ S Y L+ LKYH ++ +M + M Sbjct: 57 WGKI----PVEHATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101 >gi|294638122|ref|ZP_06716378.1| competence protein F [Edwardsiella tarda ATCC 23685] gi|291088689|gb|EFE21250.1| competence protein F [Edwardsiella tarda ATCC 23685] Length = 226 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 28/91 (30%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C I + +C C + + + + +Q+ P ++ Sbjct: 7 RCAICRLPLRAPVGICTPCRRALPLPPPCCPRCGLPSADATRPCGRCLQRPPPWQRLIFT 66 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 Y L++ KY LA +A+ M Sbjct: 67 GDYQPPLATLIQRFKYRGEWPLAFPLARLML 97 >gi|325923495|ref|ZP_08185148.1| putative amidophosphoribosyltransferase [Xanthomonas gardneri ATCC 19865] gi|325546023|gb|EGD17224.1| putative amidophosphoribosyltransferase [Xanthomonas gardneri ATCC 19865] Length = 241 Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 4/110 (3%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---PLKS 69 + + PS+C + + LC C + + + + + Sbjct: 18 QRVLRLLLPSVCLVCAEAGTADCDLCPACRAALP-DHGHACLCCATQLYVSDGALRCGHC 76 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 +Q PL ++ + Y L+R K+H ++++ M + + Sbjct: 77 LQHPPPLQRVHACFTYRWPVDGLLRRFKFHQDLPAGRLLSELMAKRCADL 126 >gi|237725966|ref|ZP_04556447.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229435774|gb|EEO45851.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 231 Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 11/109 (10%) Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + SI +L++ +P C + R +I+ LC C S++ T+ L+ + ++ + Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSRLP---RTQFHLR-KDNIVECNF 56 Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + P+ S Y L+ LKYH ++ +M + M Sbjct: 57 WGKI----PVEHATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101 >gi|269836555|ref|YP_003318783.1| phosphoribosyltransferase [Sphaerobacter thermophilus DSM 20745] gi|269785818|gb|ACZ37961.1| phosphoribosyltransferase [Sphaerobacter thermophilus DSM 20745] Length = 235 Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 30/99 (30%), Gaps = 4/99 (4%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 M + + V+ + L + P +C R LC C + + +T Sbjct: 2 MSSPLAWVRRLTRALEATLLPPVCGGCGRRGEW---LCPSCTAALRPLTDARCRC-GRPG 57 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + L IR+ ++ + KY Sbjct: 58 TRGRVCSVCAEWPDALGPIRAAFVFEGPLRSSIHRFKYR 96 >gi|262045249|ref|ZP_06018275.1| GNTI system gluconate periplasmic binding protein with phosphoribosyltransferase domain [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037459|gb|EEW38704.1| GNTI system gluconate periplasmic binding protein with phosphoribosyltransferase domain [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 212 Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 14/84 (16%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC SR + LC C + +QK P ++ +V Sbjct: 10 ICSRCSRALLACPPLCPQC--------------GLPAAASRPPCGRCLQKPPPWHRLVAV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106 Y LV+ LK+H R +L Sbjct: 56 NDYRPPLSGLVQQLKFHHRPELGP 79 >gi|213692632|ref|YP_002323218.1| phosphoribosyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524093|gb|ACJ52840.1| phosphoribosyltransferase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 228 Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 21/101 (20%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 + + ++P C LC CW + + Sbjct: 3 AQACNLLFPRGCAGCDAP---DEVLCAACW------------------ALFAQCRERDAD 41 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 +I S ++Y + + K HD T+L + M Sbjct: 42 SGGGARIWSASIYQGAARRAILDWKDHDDTELDGPFGRIMV 82 >gi|300870576|ref|YP_003785447.1| putative phosphoribosyltransferace [Brachyspira pilosicoli 95/1000] gi|300688275|gb|ADK30946.1| putative phosphoribosyltransferace [Brachyspira pilosicoli 95/1000] Length = 243 Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 39/99 (39%), Gaps = 5/99 (5%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATE---HILKNNKDNI 62 +K +F+ ++P+ C I II +C C +K+ +I + + Sbjct: 2 LKKFFAVVFNILFPNHCIICKNIIQSDKINYICLDCINKLSYIHRDDYIRCNRCGRIIDT 61 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101 +++ + +S+ Y D + L+ +K+ R Sbjct: 62 KDSTCICSYENIYFDECKSMLYYDDKTSNLIHKMKFSHR 100 >gi|237810690|ref|YP_002895141.1| ComF family protein [Burkholderia pseudomallei MSHR346] gi|237505062|gb|ACQ97380.1| ComF family protein [Burkholderia pseudomallei MSHR346] Length = 255 Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 34/123 (27%), Gaps = 7/123 (5%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55 + A+ ++ P+ C + + +C C W++ L Sbjct: 11 IRAMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + + P ++ Y L LK+ + L + + R+ Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128 Query: 116 LEK 118 Sbjct: 129 AAD 131 >gi|307243841|ref|ZP_07525970.1| ComF family protein [Peptostreptococcus stomatis DSM 17678] gi|306492779|gb|EFM64803.1| ComF family protein [Peptostreptococcus stomatis DSM 17678] Length = 256 Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 11/115 (9%) Query: 10 SIIIELFHCIYPSI--CPIYSRIINL--RFCLCGHCWSKIHFI-------TATEHILKNN 58 I + IYP C I+ R+ +C C KI FI Sbjct: 4 KIWKYILDIIYPQNLNCIFCEMPISRSNRYSMCKKCLEKIIFIHNSCDYCGKPTINTSLE 63 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 D + K+ + S Y D+S ++V LKY +T +A ++A M Sbjct: 64 VDRPVEKCPYCQGKNFLFDRNISFIEYGDLSKLMVFKLKYSGKTYMAKIIANIMA 118 >gi|253575859|ref|ZP_04853193.1| amidophosphoribosyltransferase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844653|gb|EES72667.1| amidophosphoribosyltransferase [Paenibacillus sp. oral taxon 786 str. D14] Length = 314 Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 7/88 (7%) Query: 18 CIYPSI--CPIYSRIIN----LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 + P C + I+ +C C+ I +I + + D ++ Q Sbjct: 1 MLAPPAIPCLTCGKTISERVRGYPEICLSCYLSIPWIKSPRCRICGRPMGC-PDCTRTGQ 59 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 RS +Y + + KY Sbjct: 60 APRSFVMNRSAVIYSPLMREWLAQYKYR 87 >gi|237728732|ref|ZP_04559213.1| gluconate periplasmic binding protein [Citrobacter sp. 30_2] gi|226909354|gb|EEH95272.1| gluconate periplasmic binding protein [Citrobacter sp. 30_2] Length = 227 Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 14/81 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R LC C + + +QK P ++ +V Sbjct: 22 ICSVCTRATRQHASLCPQC--------------GLPAAHTVIPCGRCLQKPPPWQRLVTV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTD 103 + Y L+ LK+ R++ Sbjct: 68 SDYVPPLSGLIHQLKFSRRSE 88 >gi|238896880|ref|YP_002921625.1| putative periplasmic gluconate-binding protein in GNT I transport system [Klebsiella pneumoniae NTUH-K2044] gi|238549207|dbj|BAH65558.1| putative periplasmic gluconate-binding protein in GNT I transport system [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 224 Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 1/84 (1%) Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + + R+ +C C + + +QK P ++ +V Sbjct: 8 CWLCQMPLAVARWGICSRCSRALLACPPLCPQCGLPAAASRHPCGRCLQKPPPWHRLVAV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106 Y LV+ LK+H R +L Sbjct: 68 NDYRPPLSGLVQQLKFHHRPELGP 91 >gi|282859873|ref|ZP_06268961.1| ComF family protein [Prevotella bivia JCVIHMP010] gi|282587276|gb|EFB92493.1| ComF family protein [Prevotella bivia JCVIHMP010] Length = 234 Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 10/94 (10%) Query: 14 ELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 +F I P C I + ++ +C C +H H+ D + + Sbjct: 10 SIFDIIAPRACTICGKRLSLSEAVICATC--NLHLNRTNYHLSP-----YDNELARCFWG 62 Query: 73 DLPLTQIRSVTLYCDMSC--VLVRLLKYHDRTDL 104 +P+ + + Y + +V LKY +R D+ Sbjct: 63 KIPIERCAAYLFYQHHTQSSKMVYALKYGNRPDI 96 >gi|288574705|ref|ZP_06393062.1| phosphoribosyltransferase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570446|gb|EFC92003.1| phosphoribosyltransferase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 225 Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 11/101 (10%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 H ++P CP+ ++ + LC C ++ ++ Sbjct: 7 FLHFLWPVSCPVCGKLAS---VLCRSCSDELVRDNPLRCLVCGEDIPCHLHGHSYPSV-- 61 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 S ++ M+ LV +KYH + + +M + + Sbjct: 62 ------SGAVHSGMARELVLSMKYHGVSGMGRIMGRSLGSA 96 >gi|289163908|ref|YP_003454046.1| competence protein ComF [Legionella longbeachae NSW150] gi|288857081|emb|CBJ10896.1| competence protein ComF [Legionella longbeachae NSW150] Length = 234 Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 1/78 (1%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFIT-ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81 IC + + N + +C HC + + H D ++ + Sbjct: 17 ICILCKQYHNDKMAVCSHCIELMPLLGPGCHHCAYPLPDTQFLVCGHCIKNPPSFDRAFI 76 Query: 82 VTLYCDMSCVLVRLLKYH 99 + + L+ KYH Sbjct: 77 KYTFEEPLRTLLHQFKYH 94 >gi|254497861|ref|ZP_05110627.1| competence protein ComF [Legionella drancourtii LLAP12] gi|254352939|gb|EET11708.1| competence protein ComF [Legionella drancourtii LLAP12] Length = 253 Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 4/102 (3%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK--NNKDNIDKDPLKSMQKDLPLTQ 78 PSIC + ++ +C C + + + D + ++K + Sbjct: 32 PSICTLCNQFHKGILAVCEPCIALLPQL-GPACQYCAYPLPDMAYLICGRCIKKPPHFDR 90 Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW-MFRVLEKI 119 + + L+ KYH+ L ++ M ++ Sbjct: 91 TFIAYKFEEPLRTLLHRFKYHNGLYLTSFLSHLIMSSAQRQL 132 >gi|313206314|ref|YP_004045491.1| phosphoribosyltransferase [Riemerella anatipestifer DSM 15868] gi|312445630|gb|ADQ81985.1| phosphoribosyltransferase [Riemerella anatipestifer DSM 15868] gi|315023180|gb|EFT36191.1| competence protein [Riemerella anatipestifer RA-YM] gi|325336241|gb|ADZ12515.1| phosphoribosyltransferase [Riemerella anatipestifer RA-GD] Length = 217 Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 10/100 (10%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 P+ C + II+ +C C S I+F T + D K + Sbjct: 2 FLDFFLPNRCLKCNLIISSDEIVCWACKSHINF---TYNDFGGKGDFYQK-----VVLKF 53 Query: 75 PLTQIRSVTLY--CDMSCVLVRLLKYHDRTDLAIMMAQWM 112 P+ + S+ Y ++S ++ LKYH + ++A W+ Sbjct: 54 PVNKAFSLMKYEKKELSQDIIHALKYHSMERVGKVLAHWV 93 >gi|78486316|ref|YP_392241.1| hypothetical protein Tcr_1977 [Thiomicrospira crunogena XCL-2] gi|78364602|gb|ABB42567.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2] Length = 231 Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 12/107 (11%), Positives = 38/107 (35%), Gaps = 13/107 (12%) Query: 14 ELFHCIYPSICPIYSRIINLRFC---LCGHCWSKIHFITATE--HILKNNKDNIDKDPLK 68 ++P +C + + L K+ + + K + + + Sbjct: 3 RFEKWLFPPVCA----LTEKKGASVDLAPELLEKM---VRPDRCCPVCAEKMSKTQICGR 55 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ-WMFR 114 + + ++ Y ++ L++ LK+H + ++ ++ WM + Sbjct: 56 CLANVPAFYRTQAAFYYESVAQDLIQSLKFHQQLHISRLLVDLWMEK 102 >gi|255065466|ref|ZP_05317321.1| ComF/gntX family protein [Neisseria sicca ATCC 29256] gi|255050291|gb|EET45755.1| ComF/gntX family protein [Neisseria sicca ATCC 29256] Length = 268 Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 8/100 (8%) Query: 23 ICPIYSRIINL-----RFCLCGHCWSKIH-FIT--ATEHILKNNKDNIDKDPLKSMQKDL 74 C + +++ C C + + F T A L +K Sbjct: 22 RCVLCHALVSACETRPYGGFCDGCAADLEEFFTDAANSCPLCFRPIQGGAVCGGCQKKPP 81 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 ++ + Y ++R LK+ ++ +A+ M R Sbjct: 82 AFERMWASLYYEPPVSSMIRALKHLADLGMSRPLAELMRR 121 >gi|295085502|emb|CBK67025.1| Predicted amidophosphoribosyltransferases [Bacteroides xylanisolvens XB1A] Length = 235 Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + ++P C + R + C+C C N D + Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTEC--------NINLPRTNYHLRKDNPVERLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +PL + S Y S +++ LKY + ++ +M ++M Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107 >gi|153805846|ref|ZP_01958514.1| hypothetical protein BACCAC_00083 [Bacteroides caccae ATCC 43185] gi|149130523|gb|EDM21729.1| hypothetical protein BACCAC_00083 [Bacteroides caccae ATCC 43185] Length = 237 Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 ++P C + R + C+C C + T++ L D Sbjct: 13 FGAFLSLLFPRCCVVCGRALAKGEECICAVCNMDLP---RTDYHL-----RRDNPVELLF 64 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 PL + S Y S ++ LLKY + ++ +M ++M Sbjct: 65 WGKFPLERATSFFYYRKGSDFRRILHLLKYGGQKEIGAIMGRYMA 109 >gi|291299363|ref|YP_003510641.1| phosphoribosyltransferase [Stackebrandtia nassauensis DSM 44728] gi|290568583|gb|ADD41548.1| phosphoribosyltransferase [Stackebrandtia nassauensis DSM 44728] Length = 244 Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 17/115 (14%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 MP + L + P C ++ LC C + D Sbjct: 1 MPIHATPALEALHRLRDLVAPRDCGGCGAVVVPGRSLCPGCLRLL--------------D 46 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 ++ + P+T + Y + + K H R DLA+ +++ + R Sbjct: 47 SLAPVAAEPGSGGPPVT---AAGEYTGVLRRCLLAFKEHRRRDLAVPLSRLLARA 98 >gi|251787886|ref|YP_003002607.1| gluconate periplasmic binding protein [Dickeya zeae Ech1591] gi|247536507|gb|ACT05128.1| gluconate periplasmic binding protein [Dickeya zeae Ech1591] Length = 239 Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 22 SICPIYSR-IINLRFCLCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLTQ 78 + C + + + + +C HC + + + +Q+ P Sbjct: 6 AQCWLCQQPLYHSHHGICSHCRRHLP--QPPVCCPRCGLPSASHVLPCGRCLQQPPPWQS 63 Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTD 103 + V+ Y LVR +K+ RT+ Sbjct: 64 LLFVSDYQPPLNTLVRRIKFQRRTE 88 >gi|315649838|ref|ZP_07902921.1| amidophosphoribosyltransferase-like protein [Paenibacillus vortex V453] gi|315274812|gb|EFU38193.1| amidophosphoribosyltransferase-like protein [Paenibacillus vortex V453] Length = 290 Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 6/112 (5%) Query: 10 SIIIELFHCIYP--SICPIYSRIINLRF---CLCGHCWSKIHFITATEHILKN-NKDNID 63 ++ + + P C + +L +C C +I +I + D Sbjct: 8 KLLGHMHRLLKPMNETCLACGKSASLARELPGICYGCSRQIPWIVNPRCLQCGRGIGCPD 67 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + RS Y + KY A ++A+ + R Sbjct: 68 CNRFGMSMSKRSFILNRSAVTYDAQMREWLAQYKYRGNERYAPLLAEMLLRA 119 >gi|254784709|ref|YP_003072137.1| competence protein ComF [Teredinibacter turnerae T7901] gi|237683729|gb|ACR10993.1| competence protein ComF [Teredinibacter turnerae T7901] Length = 234 Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 2/79 (2%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 PS C + + +C C +++ + + +Q + Sbjct: 20 PSSCILCNNPALKP--ICAQCENELPRLGKRCQCCALPTTTDTALCGECLQTTPAFDRTY 77 Query: 81 SVTLYCDMSCVLVRLLKYH 99 S +Y L+ K+ Sbjct: 78 SAFIYQGYVPWLINRFKHQ 96 >gi|170766640|ref|ZP_02901093.1| protein GntX [Escherichia albertii TW07627] gi|170124078|gb|EDS93009.1| protein GntX [Escherichia albertii TW07627] Length = 227 Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + S + LC C +I + ++K P ++ +V Sbjct: 22 ICSVCSHAAHKHEMLCPQC--------------GLPTAHIALPCGRCLKKPPPWQRLITV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 + Y L+ LK+ R+++ Sbjct: 68 SSYTPPLSPLIHQLKFSQRSEI 89 >gi|134279927|ref|ZP_01766639.1| ComF family protein [Burkholderia pseudomallei 305] gi|167901143|ref|ZP_02488348.1| ComF family protein [Burkholderia pseudomallei NCTC 13177] gi|254181942|ref|ZP_04888539.1| putative competence protein [Burkholderia pseudomallei 1655] gi|134249127|gb|EBA49209.1| ComF family protein [Burkholderia pseudomallei 305] gi|184212480|gb|EDU09523.1| putative competence protein [Burkholderia pseudomallei 1655] Length = 255 Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 34/123 (27%), Gaps = 7/123 (5%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55 + A+ ++ P+ C + + +C C W++ L Sbjct: 11 IRAMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + + P ++ Y L LK+ + L + + R+ Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128 Query: 116 LEK 118 Sbjct: 129 ATD 131 >gi|295395810|ref|ZP_06805998.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] gi|294971345|gb|EFG47232.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] Length = 233 Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 25/107 (23%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 ++ E + P +C LC C + D +P+ +M Sbjct: 1 MLSEFVDLLIPRVCAGCGCETVS---LCSACVRSL-----------------DTEPVATM 40 Query: 71 QKDLPLTQIRS--VTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 +++ Y + ++ K HDR DLA ++ + R Sbjct: 41 ---PRYGTVKAYGAGSYEGVLRNVIVNYKEHDRRDLAPVLGLMLARA 84 >gi|213581450|ref|ZP_03363276.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 201 Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 14/76 (18%) Query: 29 RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDM 88 R + R LC C + + +QK P ++ SV+ Y Sbjct: 2 RAVRQRVSLCPQC--------------GLPAGHPSLPCGRCLQKPPPWQRLVSVSDYTPP 47 Query: 89 SCVLVRLLKYHDRTDL 104 +LV LK+ R+++ Sbjct: 48 LSLLVHQLKFTRRSEI 63 >gi|325954615|ref|YP_004238275.1| phosphoribosyltransferase protein-like protein [Weeksella virosa DSM 16922] gi|323437233|gb|ADX67697.1| phosphoribosyltransferase protein-like protein [Weeksella virosa DSM 16922] Length = 222 Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 28/113 (24%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 K I+ L +P+ C S +IN R C C I F T L Sbjct: 4 KPIVDSLVDLFFPARCLGCSSVINRRQYFCVSCLQAIPF---THFSLS------------ 48 Query: 69 SMQKDLPLTQIRS--------VTLY---CDMSCVLVRLLKYHDRTDLAIMMAQ 110 Q +L ++RS + +S ++ +KY ++ ++ + A+ Sbjct: 49 --QDNLVYHRLRSLCLVESATAVFFFEKEHLSQQILHAIKYKNQAEIGALFAE 99 >gi|71901876|ref|ZP_00683937.1| competence protein F [Xylella fastidiosa Ann-1] gi|71728364|gb|EAO30534.1| competence protein F [Xylella fastidiosa Ann-1] Length = 241 Score = 42.6 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 7/109 (6%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPLKSM 70 L + PS C + + LC C + + + I + Sbjct: 18 RLLRWLLPSYCLACNEPGHQGKTLCATCQLLLPRMENACLRCAAPLKELEGIHPTCGPCL 77 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRVLE 117 PL + LY L+ K+H DLA ++A+ M + Sbjct: 78 YDPPPLETAHAAFLYHWPINKLISRFKFH--QDLACGHLLAENMAIAAQ 124 >gi|304438488|ref|ZP_07398428.1| competence protein F [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368571|gb|EFM22256.1| competence protein F [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 220 Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 16/89 (17%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 ++ L ++P CP + + C C ++ +++ D + + Sbjct: 6 LLSALLDFLFPPRCPSCHACVERQ-GFCPACARQL---IGMRRMMEMGAMAEDLTGVWVL 61 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 Y D L+R LKYH Sbjct: 62 AH------------YRDGIRDLLRALKYH 78 >gi|330012477|ref|ZP_08307391.1| comF family protein [Klebsiella sp. MS 92-3] gi|328533828|gb|EGF60507.1| comF family protein [Klebsiella sp. MS 92-3] Length = 212 Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 14/84 (16%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC SR + LC C + +QK P ++ +V Sbjct: 10 ICSRCSRALLACPPLCPQC--------------GLPAAASRHPCGRCLQKPPPWHRLVAV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106 Y LV+ LK+H R +L Sbjct: 56 NDYRPPLSGLVQQLKFHHRPELGP 79 >gi|288575565|ref|ZP_05977205.2| ComF/gntX family protein [Neisseria mucosa ATCC 25996] gi|288567578|gb|EFC89138.1| ComF/gntX family protein [Neisseria mucosa ATCC 25996] Length = 250 Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 8/100 (8%) Query: 23 ICPIYSRIINL-----RFCLCGHCWSKIH-FIT--ATEHILKNNKDNIDKDPLKSMQKDL 74 C + +++ C C + + F T A L +K Sbjct: 22 RCVLCHALVSACETRPYGGFCDGCAADLEEFFTDAANSCPLCFRPIQGGVVCGGCQKKPP 81 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 ++ + Y ++R LK+ ++ +A+ M R Sbjct: 82 AFERMWASLYYEPPVSSMIRALKHLSDLGMSRPLAELMRR 121 >gi|160932697|ref|ZP_02080086.1| hypothetical protein CLOLEP_01538 [Clostridium leptum DSM 753] gi|156867771|gb|EDO61143.1| hypothetical protein CLOLEP_01538 [Clostridium leptum DSM 753] Length = 227 Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 11/109 (10%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 + L YP+ CP ++ C +C S+ + I N + + + Sbjct: 2 KFLRRLLRSFYPARCPYCGKVTTPFEEGCKNCVSQNPGQSEAFWIYHPYWGNDNIELICC 61 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + ++ V K+H R + A M R +++ Sbjct: 62 SAWPY-WDKPKAA----------VLRFKFHGRREYAESFGLSMARSVKE 99 >gi|255019980|ref|ZP_05292053.1| Competence protein F [Acidithiobacillus caldus ATCC 51756] gi|254970509|gb|EET27998.1| Competence protein F [Acidithiobacillus caldus ATCC 51756] Length = 243 Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 29/106 (27%), Gaps = 6/106 (5%) Query: 13 IELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 L + + P C + LC C + + D Sbjct: 23 ARLLNWLLPERCRSC----DAPGVPLCPACLGDWPRLPDERCAYCALPTAANGDCPVCAL 78 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ-WMFRVL 116 + P + +Y + K+ DR D +A+ WM + Sbjct: 79 EAPPYDYCFTPFVYAAPLDAAISAWKFGDRLDWTRPLARAWMTAMG 124 >gi|320120448|gb|EFE27816.2| phosphoribosyltransferase [Filifactor alocis ATCC 35896] Length = 245 Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 6/97 (6%) Query: 15 LFHCIYPSI--CPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 I+PS C I + LC C+ K+ F + + + Sbjct: 18 FGELIFPSNLNCIGCGESIWNKNPYSLCHSCYQKLEFTD--QVCKHCGRRTLLGTSCFCQ 75 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107 + I + +Y D L+ KY +T L+ Sbjct: 76 SEHYYFDSIDTCLVYNDFLQKLIFRYKYGHQTYLSRF 112 >gi|313893733|ref|ZP_07827300.1| comF family protein [Veillonella sp. oral taxon 158 str. F0412] gi|313441747|gb|EFR60172.1| comF family protein [Veillonella sp. oral taxon 158 str. F0412] Length = 231 Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 16/40 (40%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH 53 L ++P +CP + + C C++ + I H Sbjct: 2 SLLDFLFPPVCPHCGAPVATQGDWCKTCFTDLLHIRHVPH 41 >gi|319900815|ref|YP_004160543.1| phosphoribosyltransferase [Bacteroides helcogenes P 36-108] gi|319415846|gb|ADV42957.1| phosphoribosyltransferase [Bacteroides helcogenes P 36-108] Length = 234 Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 13/112 (11%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 +K+ ++ +P C + ++ C+C C + T++ L+ + Sbjct: 3 SVLKTWLLPFVRLFFPCRCAVCGSVLREGEECVCMKCNMDMP---RTDYHLRTD------ 53 Query: 65 DPLKSMQ-KDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +P++ M LPL + S Y S ++ LLKY R D+ +M ++M Sbjct: 54 NPVECMFWGKLPLERATSCFFYHKGSDFRHVLHLLKYGGRKDIGEVMGRFMA 105 >gi|319788564|ref|YP_004148039.1| phosphoribosyltransferase [Pseudoxanthomonas suwonensis 11-1] gi|317467076|gb|ADV28808.1| phosphoribosyltransferase [Pseudoxanthomonas suwonensis 11-1] Length = 246 Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 1/118 (0%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 + + ++ + + + P C + + LC C + Sbjct: 11 LRSWPALLRDLPARICAVLLPPRCLLCGEPGDDGRDLCAACHRALP-RNHCACPRCAIPL 69 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + ++K PL + +Y L+ K+H ++A M L Sbjct: 70 AVPGTCGHCLRKAPPLQATWASFVYAPPVDRLLARYKFHHDLAAGRLLAGLMLPALAD 127 >gi|104784036|ref|YP_610534.1| competence protein ComF [Pseudomonas entomophila L48] gi|95113023|emb|CAK17751.1| putative competence protein ComF [Pseudomonas entomophila L48] Length = 245 Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + + LC C S++ ++ ++ +++ + Sbjct: 20 TCLLCDEPARQPYPLCPACESELPWLVEQCIRCALPLSLEGLTCASCSRRRPAFSRVVAA 79 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 Y L+ K++ + L +MAQ + Sbjct: 80 WHYGFPVDTLISRFKHNSQWPLGRLMAQLLGHA 112 >gi|296160422|ref|ZP_06843239.1| phosphoribosyltransferase [Burkholderia sp. Ch1-1] gi|295889403|gb|EFG69204.1| phosphoribosyltransferase [Burkholderia sp. Ch1-1] Length = 261 Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 37/121 (30%), Gaps = 9/121 (7%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKN 57 +TV S + P++C + + +C C W++ + A + Sbjct: 18 ARTVHSAWPRVAQAALPNLCALCGNL--SHTTICAGCNAAYWNEGRLRCTVCAVPLSVTR 75 Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + P ++ Y L LK+ R LA + + R+ + Sbjct: 76 WAARTQYRCADCASEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGRRLARLAQ 135 Query: 118 K 118 Sbjct: 136 D 136 >gi|167917392|ref|ZP_02504483.1| ComF family protein [Burkholderia pseudomallei BCC215] gi|217419806|ref|ZP_03451312.1| ComF family protein [Burkholderia pseudomallei 576] gi|254296008|ref|ZP_04963465.1| putative competence protein [Burkholderia pseudomallei 406e] gi|157805585|gb|EDO82755.1| putative competence protein [Burkholderia pseudomallei 406e] gi|217397110|gb|EEC37126.1| ComF family protein [Burkholderia pseudomallei 576] Length = 255 Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 14/123 (11%), Positives = 33/123 (26%), Gaps = 7/123 (5%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55 + A+ ++ P+ C + + +C C W++ L Sbjct: 11 IRAMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + P ++ Y L LK+ + L + + R+ Sbjct: 69 PGARGATRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128 Query: 116 LEK 118 Sbjct: 129 ATD 131 >gi|54295172|ref|YP_127587.1| hypothetical protein lpl2252 [Legionella pneumophila str. Lens] gi|53755004|emb|CAH16492.1| hypothetical protein lpl2252 [Legionella pneumophila str. Lens] Length = 234 Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 9/100 (9%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKDLP 75 PSIC + ++ + +C +C + F+ + D + ++K Sbjct: 15 PSICTLCNQFHKSQLAVCSNC---MEFMKQLGSCCQYCAYPLSDDTY-LVCGQCVRKRPS 70 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + L+ KYH+ LA + Q + Sbjct: 71 FDSAYIAYRFEEPLRSLIHQFKYHNGLYLASFLKQLLLNA 110 >gi|188025401|ref|ZP_02958488.2| hypothetical protein PROSTU_00226 [Providencia stuartii ATCC 25827] gi|188023650|gb|EDU61690.1| hypothetical protein PROSTU_00226 [Providencia stuartii ATCC 25827] Length = 229 Score = 42.2 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 1/89 (1%) Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81 C + + + + +C C +I ++ H + + + + ++ + Sbjct: 9 ACWLCQQPLKLVDHGICAFCIKRIPTMSNVCHRCALPAEQGHILCGRCLIQPPAWHRLIA 68 Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 V+ Y L+ K++ + LA +A+ Sbjct: 69 VSPYQAPLRKLIHRYKFNPQPQLAFTLAK 97 >gi|54298222|ref|YP_124591.1| hypothetical protein lpp2280 [Legionella pneumophila str. Paris] gi|53752007|emb|CAH13433.1| hypothetical protein lpp2280 [Legionella pneumophila str. Paris] Length = 234 Score = 41.8 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 9/100 (9%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKDLP 75 PSIC + ++ + +C +C + F+ + D + ++K Sbjct: 15 PSICTLCNQFHKSQLAVCSNC---MEFMKQLGSCCQYCAYPLSDDTY-LVCGQCVRKRPS 70 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + L+ KYH+ LA + Q + Sbjct: 71 FDSAYIAYRFEEPLRSLIHQFKYHNGLYLASFLKQLLLNA 110 >gi|94309203|ref|YP_582413.1| amidophosphoribosyltransferases-like protein [Cupriavidus metallidurans CH34] gi|93353055|gb|ABF07144.1| putative amidophosphoribosyltransferase [Cupriavidus metallidurans CH34] Length = 279 Score = 41.8 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 4/104 (3%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA--TEHILKNNKDNIDKDPLKS 69 I L+ + PS+C I +++ R +C C + I + + + Sbjct: 52 ITGLWSALLPSVCLICAKV--QRDVVCAGCADTLLRIVPRCPRCAMPGTIPGVKAGRCDA 109 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 D P+ ++ Y + LV LK+ R A +A+ M Sbjct: 110 CADDDPIDATLTLGNYITPADRLVLRLKFAARLPAAAWIARQMA 153 >gi|48428733|gb|AAT42382.1| putative amidophosphoribosyltransferase [Collimonas fungivorans Ter331] Length = 236 Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 9/103 (8%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------PLKSMQKDL 74 PS C + R + + +C C S +F ++ D +++ Sbjct: 6 PSCCALCGR--SGKQVICDGC-SGHYFSGRPPRCIQCANRLPRLDGDNPALCGNCLKQAR 62 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 Y + LV LK+ + LA AQ +F Sbjct: 63 AFDATIVACDYTAPADRLVLALKFGGQLALAPAFAQMLFAASR 105 >gi|71275558|ref|ZP_00651844.1| competence protein F [Xylella fastidiosa Dixon] gi|71900761|ref|ZP_00682882.1| competence protein F [Xylella fastidiosa Ann-1] gi|170729293|ref|YP_001774726.1| competence protein F [Xylella fastidiosa M12] gi|71163858|gb|EAO13574.1| competence protein F [Xylella fastidiosa Dixon] gi|71729491|gb|EAO31601.1| competence protein F [Xylella fastidiosa Ann-1] gi|167964086|gb|ACA11096.1| competence protein F [Xylella fastidiosa M12] Length = 241 Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 7/109 (6%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPLKSM 70 L + PS C + + LC C + + + I + Sbjct: 18 RLLRWLLPSYCLACNEPGHQGKTLCATCQLLLPRMENACLRCAAPLKELEGIHPTCGPCL 77 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRVLE 117 PL + LY L+ K+H DLA ++A M + Sbjct: 78 YDPPPLETAHAAFLYHWPINKLISRFKFH--QDLACGHLLADNMAMAAQ 124 >gi|227498341|ref|ZP_03928491.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226903803|gb|EEH89721.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 209 Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 23/96 (23%), Gaps = 15/96 (15%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 + YP CP + LC C + ++ D Sbjct: 19 ILAIFYPHYCPACHEEVEGPGLLCEACRRSTY-----------APGYLELKKETVPHLDA 67 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 R Y + LKY R D M + Sbjct: 68 VYRLYR----YEGGVKRALHGLKYEKRRDYLDRMGE 99 >gi|301308350|ref|ZP_07214304.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|300833820|gb|EFK64436.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 97 Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 11/93 (11%) Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 L + +P++C I R ++ +C C + ++ + Sbjct: 8 LLNLFFPNLCKICKRPLVEGEEQICLKCLCDL--------PHTGYHQLVNNPVEQLFIGK 59 Query: 74 LPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDL 104 + + Y L+ LKYHD +L Sbjct: 60 NRIEYATAYLRYEKGGKVQSLIHSLKYHDNKEL 92 >gi|302036453|ref|YP_003796775.1| putative phosphoribosyltransferase [Candidatus Nitrospira defluvii] gi|300604517|emb|CBK40849.1| putative Phosphoribosyltransferase [Candidatus Nitrospira defluvii] Length = 270 Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 10/99 (10%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDN------- 61 II + + PS C + + C CW I + + Sbjct: 10 IIRQATRLLLPSDCATCEQPLTDDPTPFFCRQCWGLIRPLQGPSCSRCHRPFASPYATLH 69 Query: 62 -IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + +Q+ + YC + LLKY Sbjct: 70 SPTHECHDCRTRAPRYSQVWAAYAYCSPLQDAIALLKYR 108 >gi|260173249|ref|ZP_05759661.1| putative amidophosphoribosyl-transferase [Bacteroides sp. D2] gi|315921522|ref|ZP_07917762.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695397|gb|EFS32232.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 235 Score = 41.8 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + ++P C + R + C+C C K+ N D + Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTVCNIKL--------PRTNYHLRKDNPVERLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +PL + S Y S +++ LKY + ++ +M ++M Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107 >gi|282848837|ref|ZP_06258230.1| ComF family protein [Veillonella parvula ATCC 17745] gi|294791747|ref|ZP_06756895.1| putative ComF family protein [Veillonella sp. 6_1_27] gi|294793608|ref|ZP_06758745.1| putative ComF family protein [Veillonella sp. 3_1_44] gi|282581491|gb|EFB86881.1| ComF family protein [Veillonella parvula ATCC 17745] gi|294455178|gb|EFG23550.1| putative ComF family protein [Veillonella sp. 3_1_44] gi|294456977|gb|EFG25339.1| putative ComF family protein [Veillonella sp. 6_1_27] Length = 231 Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 17/40 (42%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH 53 L+ ++P +CP + + C C++ + I H Sbjct: 2 SLWDFLFPPVCPHCGAPVATQGDWCKACFTDLLHIRHVPH 41 >gi|323343504|ref|ZP_08083731.1| amidophosphoribosyl-transferase [Prevotella oralis ATCC 33269] gi|323095323|gb|EFZ37897.1| amidophosphoribosyl-transferase [Prevotella oralis ATCC 33269] Length = 231 Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 10/109 (9%) Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + S L I P C I R+ LC C + T D D + Sbjct: 1 MISFFGRLLDLILPRQCSICGCRLAETEQVLCAVCNLMLP---RTGFA----DDAYDNEM 53 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSC--VLVRLLKYHDRTDLAIMMAQWMF 113 + LP+ + ++ Y S ++ LKY + ++ + +M Sbjct: 54 AQLFWGRLPIERSAALFYYEAQSQVSRMIYELKYRNHPEIGERLGCFMA 102 >gi|256820209|ref|YP_003141488.1| phosphoribosyltransferase protein-like protein [Capnocytophaga ochracea DSM 7271] gi|256581792|gb|ACU92927.1| phosphoribosyltransferase protein-like protein [Capnocytophaga ochracea DSM 7271] Length = 229 Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 13/106 (12%) Query: 11 IIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 I+ ++ + P+ C ++ + LC +C K+ T+ L+ + + Sbjct: 2 ILSDILSVLSPAYCRGCGKLLVTGEQFLCVNCREKL---EETDFHLQAENLFTQRLTEEC 58 Query: 70 MQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + Y +M+ L+ LLKY + + +W+ Sbjct: 59 EVF------AATALFYFKKDNMAQHLIHLLKYKGEEQIGEWLGRWL 98 >gi|289209444|ref|YP_003461510.1| phosphoribosyltransferase [Thioalkalivibrio sp. K90mix] gi|288945075|gb|ADC72774.1| phosphoribosyltransferase [Thioalkalivibrio sp. K90mix] Length = 258 Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 31/111 (27%), Gaps = 8/111 (7%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 ++++ +YP C + + +C C + + A Sbjct: 26 ALRALSAWAARALYPDHCGLCLAPLPEGGAICPACRKDLVRVEAP-CPGCAAPLPATVAC 84 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR-------TDLAIMMAQ 110 ++ + +R+ Y ++ K DLA A+ Sbjct: 85 PACQRRPPAVDALRAPWAYAWPLDRVLLAYKRSGHARAERILVDLAAQAAR 135 >gi|157148995|ref|YP_001456315.1| gluconate periplasmic binding protein [Citrobacter koseri ATCC BAA-895] gi|157086200|gb|ABV15878.1| hypothetical protein CKO_04833 [Citrobacter koseri ATCC BAA-895] Length = 243 Score = 41.4 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 14/81 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R R LC C + + +QK P ++ +V Sbjct: 38 ICSVCTRAARRRVSLCPQC--------------GLPAAHAAIPCGRCLQKPPPWQRLVTV 83 Query: 83 TLYCDMSCVLVRLLKYHDRTD 103 + Y +L+ LK+ R+D Sbjct: 84 SDYVPPLSLLIHQLKFSRRSD 104 >gi|312963457|ref|ZP_07777939.1| phosphoribosyltransferase [Pseudomonas fluorescens WH6] gi|311282263|gb|EFQ60862.1| phosphoribosyltransferase [Pseudomonas fluorescens WH6] Length = 245 Score = 41.4 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 23/79 (29%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C I +C C +++ ++ + + Q+ Q+ + Sbjct: 20 TCLICDEPTETADSVCNACETELPWLMEHCEVCALPLPMDGLVCGQCQQQPPAFKQVVAP 79 Query: 83 TLYCDMSCVLVRLLKYHDR 101 Y L+ K+ R Sbjct: 80 WTYSFPVDSLISRFKHQAR 98 >gi|256419923|ref|YP_003120576.1| phosphoribosyltransferase [Chitinophaga pinensis DSM 2588] gi|256034831|gb|ACU58375.1| phosphoribosyltransferase [Chitinophaga pinensis DSM 2588] Length = 232 Score = 41.4 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 21/102 (20%) Query: 19 IYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77 YP C + N LC C ++ F + +P++ + Sbjct: 15 FYPHTCDGCGIELTNTEHILCLRCHKRLPF---------TGYQLLQDNPVEKIF----WG 61 Query: 78 Q--IRSVTL---YCDMS--CVLVRLLKYHDRTDLAIMMAQWM 112 + +R Y + L+ KY R D+A + M Sbjct: 62 RVNVRHAMATCYYRKNAFLQQLIYQFKYKQREDIASYFGRLM 103 >gi|237717308|ref|ZP_04547789.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406074|ref|ZP_06082624.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294806839|ref|ZP_06765664.1| ComF family protein [Bacteroides xylanisolvens SD CC 1b] gi|229443291|gb|EEO49082.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262356949|gb|EEZ06039.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294445868|gb|EFG14510.1| ComF family protein [Bacteroides xylanisolvens SD CC 1b] Length = 235 Score = 41.4 bits (96), Expect = 0.037, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + ++P C + R + C+C C N D + Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +PL + S Y S +++ LKY + ++ +M ++M Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107 >gi|15836668|ref|NP_297356.1| competence protein F [Xylella fastidiosa 9a5c] gi|9104833|gb|AAF82876.1|AE003860_3 competence protein F [Xylella fastidiosa 9a5c] Length = 241 Score = 41.4 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 7/109 (6%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPLKSM 70 L + PS C + + LC C + + + I + Sbjct: 18 RLLRWLLPSYCLACNEPGHQGKTLCATCQLLLPRMENACLRCAAPLKELEGIHPTCGPCL 77 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRVLE 117 PL + LY L+ K+H DLA ++A M + Sbjct: 78 YDPPPLETAHAAFLYHWPINKLISRFKFH--QDLACGHLLADNMAMAAQ 124 >gi|269797854|ref|YP_003311754.1| amidophosphoribosyltransferase-like protein [Veillonella parvula DSM 2008] gi|269094483|gb|ACZ24474.1| amidophosphoribosyltransferase-like protein [Veillonella parvula DSM 2008] Length = 231 Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 17/40 (42%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH 53 L+ ++P +CP + + C C++ + I H Sbjct: 2 SLWDFLFPPVCPHCGAPVATQGDWCKACFTDLLHIRHIPH 41 >gi|160884054|ref|ZP_02065057.1| hypothetical protein BACOVA_02030 [Bacteroides ovatus ATCC 8483] gi|156110396|gb|EDO12141.1| hypothetical protein BACOVA_02030 [Bacteroides ovatus ATCC 8483] Length = 234 Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + ++P C + R + C+C C N D + Sbjct: 11 LSSFLSLLFPHCCVVCGRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +PL + S Y S +++ LKY + ++ +M ++M Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107 >gi|325299192|ref|YP_004259109.1| phosphoribosyltransferase [Bacteroides salanitronis DSM 18170] gi|324318745|gb|ADY36636.1| phosphoribosyltransferase [Bacteroides salanitronis DSM 18170] Length = 229 Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 11/105 (10%) Query: 14 ELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 +L +P +C R++ LC C + + + + + Sbjct: 6 DLREFFFPRLCVSCGKRLMQGEEGLCLAC--------SASLPYTSIYNKEGNEMERCFWG 57 Query: 73 DLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 P+ + S+ Y ++ +KYH+R L + M +WM Sbjct: 58 RFPIVRASSLFYYAKGGKVAQVLYAMKYHNRRKLCVRMGEWMGSA 102 >gi|91781672|ref|YP_556878.1| putative competence protein f-related protein [Burkholderia xenovorans LB400] gi|91685626|gb|ABE28826.1| Putative competence protein f-related protein [Burkholderia xenovorans LB400] Length = 261 Score = 41.4 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 9/121 (7%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKN 57 + V S + P++C + + +C C W++ + A + Sbjct: 18 ARAVHSAWPRVAQVALPNLCALCGNL--SHTTICAGCDAAYWNEERLRCTVCAVPLSVTQ 75 Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + P ++ Y L LK+ R LA Q + R+ + Sbjct: 76 WAARTQYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGQRLARLAQ 135 Query: 118 K 118 Sbjct: 136 D 136 >gi|270264448|ref|ZP_06192714.1| gluconate periplasmic binding protein [Serratia odorifera 4Rx13] gi|270041584|gb|EFA14682.1| gluconate periplasmic binding protein [Serratia odorifera 4Rx13] Length = 227 Score = 41.4 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 1/89 (1%) Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81 C + + + R +C +C + + + +Q+ P + Sbjct: 7 RCWLCRQPLCLSRHGICSYCLRHLPAKPLCCPCCGLPAGDAAHPCGRCLQRPPPWQALVF 66 Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 V Y L++ K+ +LA ++A+ Sbjct: 67 VGDYVAPLRQLIKKFKFQHAPELAPLLAR 95 >gi|313896725|ref|ZP_07830273.1| comF family protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974642|gb|EFR40109.1| comF family protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 216 Score = 41.4 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 15/89 (16%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 ++ ++P CP + R CG C +T + ++ + ++ Sbjct: 1 MLSMFVDFLFPPRCPSCKSYVERRGSFCGAC---TRRLTGLRTVARSVDAVSYLAGIWAL 57 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 Y + L+R LKY Sbjct: 58 GY------------YREGVRDLLRTLKYR 74 >gi|210630450|ref|ZP_03296453.1| hypothetical protein COLSTE_00337 [Collinsella stercoris DSM 13279] gi|210160452|gb|EEA91423.1| hypothetical protein COLSTE_00337 [Collinsella stercoris DSM 13279] Length = 243 Score = 41.4 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 5/108 (4%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDK 64 + ++ + + P+ C R L C C + I L+ D Sbjct: 5 SRLAAVTEVIGELLSPTRCASCER----PGALICDDCLRTMVRIDPAHACLRCGAPFGDM 60 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + L + + ++ +VR K LA +A+ M Sbjct: 61 LCTECRGAASDLDRCLAAVVFDGPPARIVRAYKDAGERRLAERIAEIM 108 >gi|261250553|ref|ZP_05943128.1| predicted amidophosphoribosyltransferase [Vibrio orientalis CIP 102891] gi|260939122|gb|EEX95109.1| predicted amidophosphoribosyltransferase [Vibrio orientalis CIP 102891] Length = 232 Score = 41.4 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 23/89 (25%), Gaps = 4/89 (4%) Query: 12 IIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNID-KDPLKS 69 II + P C + + C C F+ + + Sbjct: 6 IINYIADLLPLNCELCGLALDEQHNGFCFVC-RD-RFLPIPRCQCCGLPCVAETLLCGEC 63 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + P ++ V Y V LKY Sbjct: 64 LVTPPPWRRLYCVGDYQQPLSTYVHHLKY 92 >gi|154499872|ref|ZP_02037910.1| hypothetical protein BACCAP_03529 [Bacteroides capillosus ATCC 29799] gi|150271470|gb|EDM98727.1| hypothetical protein BACCAP_03529 [Bacteroides capillosus ATCC 29799] Length = 220 Score = 41.4 bits (96), Expect = 0.045, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 25/85 (29%), Gaps = 17/85 (20%) Query: 15 LFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 L ++P C R++ +C C S + ++T + Q Sbjct: 7 LLDLLFPPRCVFCGRVLGTGEREICSQCQSTLPWLT----------------EEAAEQTG 50 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKY 98 + S Y + + K+ Sbjct: 51 EFFDKCVSPLRYENFVRDSIHRYKF 75 >gi|217967794|ref|YP_002353300.1| hypothetical protein Dtur_1412 [Dictyoglomus turgidum DSM 6724] gi|217336893|gb|ACK42686.1| conserved hypothetical protein [Dictyoglomus turgidum DSM 6724] Length = 231 Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 4/97 (4%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKD 73 L ++P C R +C +C K+ F + +D +++ Sbjct: 9 LLDVLFPKKCVFCGRY--SEGFVCKNCLKKLKFPE-YYCLSCGQPLTVDLQICYNCNKEE 65 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 V Y D ++ L K+ ++ +A +Q Sbjct: 66 RKWDGYEFVAYYEDGWKDIISLFKFKNKPYIADFFSQ 102 >gi|83815714|ref|YP_445203.1| competence protein F [Salinibacter ruber DSM 13855] gi|83757108|gb|ABC45221.1| competence protein F [Salinibacter ruber DSM 13855] Length = 239 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 31/117 (26%), Gaps = 8/117 (6%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDN 61 +I++ V+ L YP C LC C + E + ++ Sbjct: 10 SIVRFVRDCARGLLDVAYPPRCLGCGGRAESPQLPLCPTCVRSLERAPEVEVTARLDRLP 69 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 I + + LKY +R + + + M + Sbjct: 70 IGTSIFDEALALWVFDKG-------GTLQAVQHALKYQNRPRYGVPLGRLMGEAFAE 119 >gi|76811333|ref|YP_332083.1| ComF family protein [Burkholderia pseudomallei 1710b] gi|126440013|ref|YP_001057539.1| putative competence protein [Burkholderia pseudomallei 668] gi|126451766|ref|YP_001064787.1| putative competence protein [Burkholderia pseudomallei 1106a] gi|167844143|ref|ZP_02469651.1| ComF family protein [Burkholderia pseudomallei B7210] gi|167909363|ref|ZP_02496454.1| ComF family protein [Burkholderia pseudomallei 112] gi|226193721|ref|ZP_03789324.1| ComF family protein [Burkholderia pseudomallei Pakistan 9] gi|242314129|ref|ZP_04813145.1| ComF family protein [Burkholderia pseudomallei 1106b] gi|254187875|ref|ZP_04894387.1| putative competence protein [Burkholderia pseudomallei Pasteur 52237] gi|254196896|ref|ZP_04903320.1| putative competence protein [Burkholderia pseudomallei S13] gi|254261894|ref|ZP_04952948.1| competence protein homolog [Burkholderia pseudomallei 1710a] gi|76580786|gb|ABA50261.1| ComF family protein [Burkholderia pseudomallei 1710b] gi|126219506|gb|ABN83012.1| putative competence protein [Burkholderia pseudomallei 668] gi|126225408|gb|ABN88948.1| ComF family protein [Burkholderia pseudomallei 1106a] gi|157935555|gb|EDO91225.1| putative competence protein [Burkholderia pseudomallei Pasteur 52237] gi|169653639|gb|EDS86332.1| putative competence protein [Burkholderia pseudomallei S13] gi|225934299|gb|EEH30283.1| ComF family protein [Burkholderia pseudomallei Pakistan 9] gi|242137368|gb|EES23770.1| ComF family protein [Burkholderia pseudomallei 1106b] gi|254220583|gb|EET09967.1| competence protein homolog [Burkholderia pseudomallei 1710a] Length = 255 Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 7/123 (5%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55 + + ++ P+ C + + +C C W++ L Sbjct: 11 IRTMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + + P ++ Y L LK+ + L + + R+ Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128 Query: 116 LEK 118 Sbjct: 129 ATD 131 >gi|237802414|ref|ZP_04590875.1| competence protein ComF [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025271|gb|EGI05327.1| competence protein ComF [Pseudomonas syringae pv. oryzae str. 1_6] Length = 245 Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 24/76 (31%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + + +C C +++ ++ A ++ +Q+ + Sbjct: 20 ICLLCDERSEVPTPICVPCEAELPWLGAQCECCALPLPGAGLSCGLCSKRPPAFSQVIAP 79 Query: 83 TLYCDMSCVLVRLLKY 98 Y L+ K+ Sbjct: 80 WRYDFPVDSLITRFKH 95 >gi|291560001|emb|CBL38801.1| Predicted amidophosphoribosyltransferases [butyrate-producing bacterium SSC/2] Length = 236 Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 3/87 (3%) Query: 15 LFHCIYPSICPIY-SRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQ 71 + ++P ICP+ +++ +C C K FI K+ K+ + Q Sbjct: 1 MLSFLFPPICPLCAKELLDKGEHICKICSKKQIFIKEPTCYSCGKSMKNQEKEYCSDCRQ 60 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + + +Y + +KY Sbjct: 61 HPKNFERGMGLCIYQKPVTDSLAAIKY 87 >gi|159896698|ref|YP_001542945.1| phosphoribosyltransferase [Herpetosiphon aurantiacus ATCC 23779] gi|159889737|gb|ABX02817.1| phosphoribosyltransferase [Herpetosiphon aurantiacus ATCC 23779] Length = 223 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 16/96 (16%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 L +YP C + C C+++ +T + + + Sbjct: 8 SLLDLVYPPRCYSCGKAGTQ---FCPACFAECIPLTPPQRPQP-------------LAAN 51 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 PL + + + + KY + LA ++A Sbjct: 52 SPLERALGIYPFQGSLRAAIHAFKYQNAHPLAQILA 87 >gi|153828329|ref|ZP_01980996.1| ComF family protein [Vibrio cholerae 623-39] gi|148876159|gb|EDL74294.1| ComF family protein [Vibrio cholerae 623-39] Length = 286 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTSVDQCGQCLGQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144 >gi|254448931|ref|ZP_05062386.1| ComF family protein [gamma proteobacterium HTCC5015] gi|198261468|gb|EDY85758.1| ComF family protein [gamma proteobacterium HTCC5015] Length = 249 Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats. Identities = 11/95 (11%), Positives = 31/95 (32%), Gaps = 4/95 (4%) Query: 8 VKSIIIELFHCIYPSICPIYS---RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 ++S + + + ++P C + LC C + + + + Sbjct: 8 LESTLSGVVNALFPDRCFECQCRLAPSSEAALLCDDCADLLPALE-MSCPRCGVPMSNGQ 66 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + + +V Y +S L++ K+ Sbjct: 67 LCGQCIARPPKWRAAAAVWCYEGLSKALIQRYKFR 101 >gi|152972291|ref|YP_001337437.1| putative periplasmic gluconate-binding protein in GNT I transport system [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957140|gb|ABR79170.1| putative periplasmic gluconate-binding protein in GNT I transport system [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 212 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC SR + LC C + +QK P ++ +V Sbjct: 10 ICSRCSRALLACPPLCPQC--------------GLPAAASRHPCGRCLQKPPPWHRLVAV 55 Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104 Y LV+ LK+H R +L Sbjct: 56 NDYRPPLSGLVQQLKFHHRPEL 77 >gi|153212576|ref|ZP_01948323.1| ComF family protein [Vibrio cholerae 1587] gi|124116447|gb|EAY35267.1| ComF family protein [Vibrio cholerae 1587] Length = 286 Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTSVDQCGQCLGQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144 >gi|229513647|ref|ZP_04403111.1| hypothetical protein VCB_001294 [Vibrio cholerae TMA 21] gi|229349524|gb|EEO14480.1| hypothetical protein VCB_001294 [Vibrio cholerae TMA 21] Length = 286 Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTSVDQCGQCLGQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144 >gi|88861080|ref|ZP_01135715.1| hypothetical protein PTD2_16826 [Pseudoalteromonas tunicata D2] gi|88817008|gb|EAR26828.1| hypothetical protein PTD2_16826 [Pseudoalteromonas tunicata D2] Length = 230 Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 13 IELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFIT 49 +L + ++PS C + ++ LC HC + + FI Sbjct: 3 QQLINWLFPSRCLMCQTLVTQNNEQLCPHCIADLPFIE 40 >gi|121600389|ref|YP_991524.1| ComF family protein [Burkholderia mallei SAVP1] gi|124383797|ref|YP_001027402.1| ComF family protein [Burkholderia mallei NCTC 10229] gi|126448718|ref|YP_001082367.1| ComF family protein [Burkholderia mallei NCTC 10247] gi|167001963|ref|ZP_02267753.1| ComF family protein [Burkholderia mallei PRL-20] gi|238563019|ref|ZP_00439525.2| ComF family protein [Burkholderia mallei GB8 horse 4] gi|254174892|ref|ZP_04881553.1| ComF family protein [Burkholderia mallei ATCC 10399] gi|254201770|ref|ZP_04908134.1| ComF family protein [Burkholderia mallei FMH] gi|254207103|ref|ZP_04913454.1| ComF family protein [Burkholderia mallei JHU] gi|254357587|ref|ZP_04973861.1| ComF family protein [Burkholderia mallei 2002721280] gi|121229199|gb|ABM51717.1| ComF family protein [Burkholderia mallei SAVP1] gi|124291817|gb|ABN01086.1| ComF family protein [Burkholderia mallei NCTC 10229] gi|126241588|gb|ABO04681.1| ComF family protein [Burkholderia mallei NCTC 10247] gi|147747664|gb|EDK54740.1| ComF family protein [Burkholderia mallei FMH] gi|147752645|gb|EDK59711.1| ComF family protein [Burkholderia mallei JHU] gi|148026651|gb|EDK84736.1| ComF family protein [Burkholderia mallei 2002721280] gi|160695937|gb|EDP85907.1| ComF family protein [Burkholderia mallei ATCC 10399] gi|238521500|gb|EEP84951.1| ComF family protein [Burkholderia mallei GB8 horse 4] gi|243062289|gb|EES44475.1| ComF family protein [Burkholderia mallei PRL-20] Length = 255 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 7/123 (5%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55 + + ++ P+ C + + +C C W++ L Sbjct: 11 IRTMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + + P ++ Y L LK+ + L + + R+ Sbjct: 69 PGARGAMRFHCGACAKVPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128 Query: 116 LEK 118 Sbjct: 129 ATD 131 >gi|255659147|ref|ZP_05404556.1| putative competence protein F [Mitsuokella multacida DSM 20544] gi|260848597|gb|EEX68604.1| putative competence protein F [Mitsuokella multacida DSM 20544] Length = 218 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 21/90 (23%), Gaps = 15/90 (16%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 + + L ++P CP+ + C C + I Sbjct: 3 RGLWQMLVDFVFPPHCPVCHAYVEHLGAWCPDCMAAAQ-----------KPHVILLPAAM 51 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 R Y L+ LKY Sbjct: 52 QPLIGTAWALGR----YHGGLRSLIHALKY 77 >gi|291514884|emb|CBK64094.1| Predicted amidophosphoribosyltransferases [Alistipes shahii WAL 8301] Length = 240 Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 11/116 (9%) Query: 6 QTVKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 + ++ ++ ++P C + + +C C L D Sbjct: 2 SILNDLVRDVASLLFPPRCAVCGEPLTRGERTVCTLC--------RATAPLTGYWREADN 53 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 ++ +P+ Q + S L+ KY A M W R L + Sbjct: 54 PVVRRCWGMVPVCQASGFLFFVRASGWRRLIHGFKYRGAWRTAREMGAWYGRYLRE 109 >gi|53718089|ref|YP_107075.1| hypothetical protein BPSL0450 [Burkholderia pseudomallei K96243] gi|52208503|emb|CAH34438.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] Length = 242 Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 31/120 (25%), Gaps = 7/120 (5%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHILKNN 58 + ++ P+ C + + +C C W++ L Sbjct: 1 MAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPLPGA 58 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + + P ++ Y L LK+ + L + + R+ Sbjct: 59 RGATRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARLATD 118 >gi|255533737|ref|YP_003094109.1| phosphoribosyltransferase [Pedobacter heparinus DSM 2366] gi|255346721|gb|ACU06047.1| phosphoribosyltransferase [Pedobacter heparinus DSM 2366] Length = 232 Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 11/100 (11%) Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 +K I+ +LF ++PS+C + LC C + + + + Sbjct: 4 LKRILGDLFSLLFPSLCCGCGTDLYTGEQLLCTECLYNL--------PYTDYHLHTENKA 55 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCV--LVRLLKYHDRTDL 104 K + LP + S+ + + L+ LKY R DL Sbjct: 56 AKQLWGRLPCNAVMSLFYFKKGARTQNLIHNLKYKGRKDL 95 >gi|331084363|ref|ZP_08333467.1| hypothetical protein HMPREF0992_02391 [Lachnospiraceae bacterium 6_1_63FAA] gi|330401627|gb|EGG81208.1| hypothetical protein HMPREF0992_02391 [Lachnospiraceae bacterium 6_1_63FAA] Length = 234 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 2/91 (2%) Query: 15 LFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNK-DNIDKDPLKSMQK 72 +YP CP+ I +C C K+ I + +++ K +K Sbjct: 6 FLDILYPRHCPVCHEITVPWGRKICDTCKDKLKPIYGARCFCCSKPLQRAEQEYCKDCRK 65 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 Q + Y + + LKY R + Sbjct: 66 TRQFQQGLGIFSYSTLLQNSLFQLKYGKRQE 96 >gi|284048801|ref|YP_003399140.1| competence protein F [Acidaminococcus fermentans DSM 20731] gi|283953022|gb|ADB47825.1| competence protein F [Acidaminococcus fermentans DSM 20731] Length = 224 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 16/105 (15%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 S + L YP CP + LCG C KI + + + L Sbjct: 4 SFVRLLQSLFYPHGCPGCGEEVREPGVLCGRCREKI-----------WHPRSFHPESLGC 52 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA-QWMF 113 D + Y + + K+ R DL + +W+ Sbjct: 53 PHVDGLFF----LLDYAGAIQKALWMAKFRGREDLLPRLGEEWLQ 93 >gi|117924701|ref|YP_865318.1| phosphoribosyltransferase [Magnetococcus sp. MC-1] gi|117608457|gb|ABK43912.1| phosphoribosyltransferase [Magnetococcus sp. MC-1] Length = 242 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 3/99 (3%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK--DPLKSMQKDLPLTQIRS 81 CP+ + ++ LC CW + +++ + + + + Sbjct: 15 CPLCGVDVGDKYSLCQGCWLSLPTLSSQLCGRCGEEVTMSLANGCGHCQGVGVMQDRTLC 74 Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQW-MFRVLEKI 119 Y +L+ K+ D++ M A W R+ ++ Sbjct: 75 AFPYEPPISLLLLGAKFADKSRWGAMAAHWGWARLGREL 113 >gi|53724518|ref|YP_104676.1| ComF family protein [Burkholderia mallei ATCC 23344] gi|52427941|gb|AAU48534.1| ComF family protein [Burkholderia mallei ATCC 23344] Length = 242 Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 32/120 (26%), Gaps = 7/120 (5%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHILKNN 58 + ++ P+ C + + +C C W++ L Sbjct: 1 MAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPLPGA 58 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + + + P ++ Y L LK+ + L + + R+ Sbjct: 59 RGAMRFHCGACAKVPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARLATD 118 >gi|238019432|ref|ZP_04599858.1| hypothetical protein VEIDISOL_01301 [Veillonella dispar ATCC 17748] gi|237864131|gb|EEP65421.1| hypothetical protein VEIDISOL_01301 [Veillonella dispar ATCC 17748] Length = 231 Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 17/40 (42%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH 53 L+ ++P +CP + + C C++ + I H Sbjct: 2 SLWDFLFPPVCPHCGASVATQGDWCETCFNDLLHIRHVPH 41 >gi|229521793|ref|ZP_04411211.1| hypothetical protein VIF_002329 [Vibrio cholerae TM 11079-80] gi|229341387|gb|EEO06391.1| hypothetical protein VIF_002329 [Vibrio cholerae TM 11079-80] Length = 286 Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y +V LKY Sbjct: 122 RKLMCVGDYRFPLSDVVHQLKYQ 144 >gi|190576253|ref|YP_001974098.1| hypothetical protein Smlt4454 [Stenotrophomonas maltophilia K279a] gi|190014175|emb|CAQ47819.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 229 Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 6/118 (5%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-ILKNNK 59 MPA+ ++ + ++ + P C + + LC C++++ + Sbjct: 1 MPALFKSTR-LLQAALRVVLPLRCLVCGEPGHDELDLCRACFAELPWAGRACLRCALPLP 59 Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRV 115 +N + P + LY L+ K+H DLA ++AQ M R Sbjct: 60 ENALIVCGICRDEVPPQAATHASLLYLPPVDQLLVRYKFH--QDLAAGRLLAQLMQRA 115 >gi|312174099|emb|CBX82352.1| Competence protein F [Erwinia amylovora ATCC BAA-2158] Length = 237 Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 3/80 (3%) Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQ 78 P C + + + LC C ++ + + +++ P + Sbjct: 15 PPGCWLCAMPLAFAIHGLCSVCLRQL-LVHPACCPRCGLPAGCSTHQCGRCLRRPPPWQR 73 Query: 79 IRSVTLYCDMSCVLVRLLKY 98 + +V+ + LV LK+ Sbjct: 74 LIAVSAWQPPLSQLVNRLKF 93 >gi|238023027|ref|ZP_04603453.1| hypothetical protein GCWU000324_02949 [Kingella oralis ATCC 51147] gi|237865410|gb|EEP66550.1| hypothetical protein GCWU000324_02949 [Kingella oralis ATCC 51147] Length = 249 Score = 40.7 bits (94), Expect = 0.073, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 26/93 (27%), Gaps = 6/93 (6%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFI---TATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 C I I LC C S++ + T + P + Sbjct: 33 CLICHDI--QDNALCPACQSELRRLFPDTRHLCPRCGEASLHQALCGNCQRHPPPYSAFW 90 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y L+ K+H L + A W+ Sbjct: 91 ACAEYAAPIPALLHAWKHHGNRHLTPVFA-WLL 122 >gi|302671946|ref|YP_003831906.1| comF family protein [Butyrivibrio proteoclasticus B316] gi|302396419|gb|ADL35324.1| comF family protein [Butyrivibrio proteoclasticus B316] Length = 256 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 35/121 (28%), Gaps = 15/121 (12%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRI----------INLRFCLCGHCWSKIHFITA 50 + ++ + ++ IYP CP+ + I + C KI +I Sbjct: 2 LQSVSDSFTEVVYGAIRLIYPRHCPVCDGLLPWAEIENGKIIKGRLIHKSCAGKIRYIRG 61 Query: 51 TEHILKNNKDNIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAI 106 + ++ + SV Y +S + KY R + A Sbjct: 62 ATCMKCGKPLGKSDKENEYCSDCIRVHHVFDRGYSVFDYRSISGS-IYKFKYMGRQEYAT 120 Query: 107 M 107 Sbjct: 121 F 121 >gi|299144700|ref|ZP_07037768.1| competence protein [Bacteroides sp. 3_1_23] gi|298515191|gb|EFI39072.1| competence protein [Bacteroides sp. 3_1_23] Length = 234 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + ++P C + R + C+C C N D + Sbjct: 11 LSSFLSLLFPRCCVVCDRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +PL + S Y S +++ LKY + ++ +M ++M Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107 >gi|298480136|ref|ZP_06998335.1| competence protein [Bacteroides sp. D22] gi|298273945|gb|EFI15507.1| competence protein [Bacteroides sp. D22] Length = 234 Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + ++P C + R + C+C C N D + Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +PL + S Y S +++ LKY + ++ ++M ++M Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGVIMGRYMA 107 >gi|88811929|ref|ZP_01127182.1| competence protein F [Nitrococcus mobilis Nb-231] gi|88790813|gb|EAR21927.1| competence protein F [Nitrococcus mobilis Nb-231] Length = 219 Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITA--TEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 C + LC C +++ ++ A + L ++ ++ P +R Sbjct: 2 RCRFCAAPGVNGLELCEPCAAELPWLDAQCRQCALPLTDTGEERLCGGCLRHPPPFRHVR 61 Query: 81 SVTLYCDMSCVLVRLLKYH 99 + YC L++ LKY Sbjct: 62 APFRYCHPIDALLKALKYG 80 >gi|113866369|ref|YP_724858.1| amidophosphoribosyltransferase [Ralstonia eutropha H16] gi|113525145|emb|CAJ91490.1| predicted amidophosphoribosyltransferase [Ralstonia eutropha H16] Length = 285 Score = 40.7 bits (94), Expect = 0.076, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 27/99 (27%), Gaps = 6/99 (6%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 PS C + + R +C C + + Q Sbjct: 67 PSACALCGAV--QRQVVCAPCAADLLRPVRR-CPACALAQGRHFHCPACAASPPAYDQAH 123 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++ Y LV LK+ LA +A R+ + Sbjct: 124 TLGDYASPQDQLVLALKFGHALPLAGWLA---ARLAAGL 159 >gi|237718860|ref|ZP_04549341.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293371903|ref|ZP_06618307.1| ComF family protein [Bacteroides ovatus SD CMC 3f] gi|229451992|gb|EEO57783.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292633149|gb|EFF51726.1| ComF family protein [Bacteroides ovatus SD CMC 3f] Length = 234 Score = 40.7 bits (94), Expect = 0.077, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + ++P C + R + C+C C N D + Sbjct: 11 LSSFLSLLFPRCCVVCDRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +PL + S Y S +++ LKY + ++ +M ++M Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107 >gi|186475042|ref|YP_001856512.1| putative competence protein F-like protein [Burkholderia phymatum STM815] gi|184191501|gb|ACC69466.1| putative competence protein F-related protein [Burkholderia phymatum STM815] Length = 268 Score = 40.7 bits (94), Expect = 0.077, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 33/117 (28%), Gaps = 9/117 (7%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEH 53 + + + S L H P+ C + + LC C W++ + A Sbjct: 22 VSGVARRSVSAWPALAHLALPNSCALCGNM--SHQTLCCFCDEAWWNQARLRCTVCAVPL 79 Query: 54 ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + ++ Y L LK+ R LA A+ Sbjct: 80 SGFRRASLMHYRCGDCLATPPAFDATVALADYRAPLDALAVGLKFRARLALANEFAR 136 >gi|294648140|ref|ZP_06725683.1| conserved domain protein [Bacteroides ovatus SD CC 2a] gi|292636524|gb|EFF54999.1| conserved domain protein [Bacteroides ovatus SD CC 2a] Length = 149 Score = 40.7 bits (94), Expect = 0.078, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + ++P C + R + C+C C N D + Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 +PL + S Y S +++ LKY + ++ +M ++M Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107 >gi|114778949|ref|ZP_01453740.1| hypothetical protein SPV1_10341 [Mariprofundus ferrooxydans PV-1] gi|114550821|gb|EAU53389.1| hypothetical protein SPV1_10341 [Mariprofundus ferrooxydans PV-1] Length = 258 Score = 40.3 bits (93), Expect = 0.080, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 5/85 (5%) Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK----DNIDKDPLKSMQK 72 H ++P C + ++ C C +I I L+ + Sbjct: 24 HLLFPPGCLFCRKALDESDGCCPDCLQEI-LIWPASTCLRCGSMLPLALAPGPCGHCLHH 82 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLK 97 Q S+ Y + K Sbjct: 83 PPAQQQTHSLYQYHGPVRDAILNWK 107 >gi|152980936|ref|YP_001354845.1| Comf family protein [Janthinobacterium sp. Marseille] gi|151281013|gb|ABR89423.1| Comf family protein [Janthinobacterium sp. Marseille] Length = 217 Score = 40.3 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 8/100 (8%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----PLKSMQKDLP 75 P+ C + S I LC C F + + ++ Sbjct: 21 PTSCALCS--IPGTSALCAPC-RGQFFSRRPPRCTQCAYPLTHGEHARSFCGNCLRTPRA 77 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 Y LV LK+ ++ LA + AQ + Sbjct: 78 FDATIVAGDYSAPIDHLVLALKFGNQLALAPLFAQLIVDA 117 >gi|292489915|ref|YP_003532805.1| competence protein F [Erwinia amylovora CFBP1430] gi|291555352|emb|CBA23721.1| Competence protein F [Erwinia amylovora CFBP1430] Length = 237 Score = 40.3 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 3/80 (3%) Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQ 78 P C + + + LC C ++ + + + +++ P + Sbjct: 15 PPGCWLCAMPLAFAIHGLCSVCLRQL-LVHPACCPRCGLPAGCSRHQCGRCLRRPPPWQR 73 Query: 79 IRSVTLYCDMSCVLVRLLKY 98 + +V+ + LV LK+ Sbjct: 74 LIAVSAWQPPLSQLVNRLKF 93 >gi|256005256|ref|ZP_05430223.1| phosphoribosyltransferase [Clostridium thermocellum DSM 2360] gi|255990807|gb|EEU00922.1| phosphoribosyltransferase [Clostridium thermocellum DSM 2360] gi|316941867|gb|ADU75901.1| phosphoribosyltransferase [Clostridium thermocellum DSM 1313] Length = 220 Score = 40.3 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 37/111 (33%), Gaps = 16/111 (14%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 ++ + + I+P C I+ +C C+ KI F + + D Sbjct: 1 MVNWIINLIFPPKCIFCGTILGTNTKIEICKECYEKIDFKEGASISFQGQYNYYDSVVCV 60 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Y + +R K++++ A+ + + ++++ Sbjct: 61 C--------------DYSGIVKEAIRKYKFYNKPSYYRTFARLLAQKIKEL 97 >gi|125974733|ref|YP_001038643.1| phosphoribosyltransferase [Clostridium thermocellum ATCC 27405] gi|281418798|ref|ZP_06249817.1| phosphoribosyltransferase [Clostridium thermocellum JW20] gi|125714958|gb|ABN53450.1| phosphoribosyltransferase [Clostridium thermocellum ATCC 27405] gi|281407882|gb|EFB38141.1| phosphoribosyltransferase [Clostridium thermocellum JW20] Length = 220 Score = 40.3 bits (93), Expect = 0.084, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 37/111 (33%), Gaps = 16/111 (14%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 ++ + + I+P C I+ +C C+ KI F + + D Sbjct: 1 MVNWIINLIFPPKCIFCGTILGTNTKIEICKECYEKIDFKEGASISFQGQYNYYDSVVCV 60 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Y + +R K++++ A+ + + ++++ Sbjct: 61 C--------------DYSGIVKEAIRKYKFYNKPSYYRTFARLLAQKIKEL 97 >gi|295094194|emb|CBK83285.1| Predicted amidophosphoribosyltransferases [Coprococcus sp. ART55/1] Length = 243 Score = 40.3 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 2/108 (1%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSM 70 L +YP C I ++ + L + + ++ ++ + + ++ L Sbjct: 12 RLLTDLLYPRRCAICDEVLPMGEGLICRGHNSLPYVKTPSCMVCGKEVDSEERELCLDCE 71 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + + V Y + V +KYH++ + M + Sbjct: 72 KHSRNFERGFPVFNYVEPVKASVLAIKYHNKKEYCDFYGAQMAEKVRP 119 >gi|269977980|ref|ZP_06184933.1| competence protein F [Mobiluncus mulieris 28-1] gi|269933827|gb|EEZ90408.1| competence protein F [Mobiluncus mulieris 28-1] Length = 245 Score = 40.3 bits (93), Expect = 0.089, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 29/97 (29%), Gaps = 21/97 (21%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +++ + +L + P+ C +C C ++I +D + Sbjct: 19 LRAALTDLGGVLLPTECVGCGAW---DEMVCDRCLAQI----------LGEPQALDLE-- 63 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 + +V Y V K+ R DL Sbjct: 64 --LAGIPGF----AVANYEGAMRRFVLAGKHDPRLDL 94 >gi|313113645|ref|ZP_07799226.1| ComF family protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310624013|gb|EFQ07387.1| ComF family protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 259 Score = 40.3 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 31/105 (29%), Gaps = 15/105 (14%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 + I+ +YP CP R++ +C C +++ + + + + Sbjct: 4 YSVPRRILRGARQLVYPRRCPFCDRVLGS-VPVCPDCAAELEKLRRKPGMRLDASQHYLG 62 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + + P Y + KYH A A Sbjct: 63 ELTGAAA---PF-------RYEGCVRRGILHTKYH----AAPWAA 93 >gi|51891258|ref|YP_073949.1| putative competence protein ComF [Symbiobacterium thermophilum IAM 14863] gi|51854947|dbj|BAD39105.1| putative competence protein ComF [Symbiobacterium thermophilum IAM 14863] Length = 254 Score = 40.3 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 44/125 (35%), Gaps = 13/125 (10%) Query: 8 VKSIIIELFHCIYP--SICPIYSRI----------INLRFCLCGHCWSKIHF-ITATEHI 54 +++I+ L ++P + C + +C CW+ + F + I Sbjct: 5 LRTILEGLVTLLWPQRTTCITCDGPLPAPLPPLATVAETVPVCADCWAAMPFTLDMRLCI 64 Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + ++ ++ L+ + V +K+ R L + +++ + Sbjct: 65 NCSRPLRGGWGLCAECVITPSYGRVWALGLHRGVLRAAVHHVKFSGRQALGEALGRYLAQ 124 Query: 115 VLEKI 119 ++E + Sbjct: 125 MVEDL 129 >gi|237747426|ref|ZP_04577906.1| gntX protein [Oxalobacter formigenes HOxBLS] gi|229378777|gb|EEO28868.1| gntX protein [Oxalobacter formigenes HOxBLS] Length = 199 Score = 40.3 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%) Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + ++ + Y LV LLK+ R LA +M + +++ Sbjct: 13 CGECLEHTPSFDETVVAVNYEPPLDQLVHLLKFQYRLALAPLMGKLIYQA 62 >gi|111115494|ref|YP_710112.1| hypothetical protein BAPKO_0705 [Borrelia afzelii PKo] gi|216263580|ref|ZP_03435575.1| conserved hypothetical protein [Borrelia afzelii ACA-1] gi|110890768|gb|ABH01936.1| hypothetical protein BAPKO_0705 [Borrelia afzelii PKo] gi|215980424|gb|EEC21245.1| conserved hypothetical protein [Borrelia afzelii ACA-1] Length = 118 Score = 40.3 bits (93), Expect = 0.094, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 7/82 (8%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77 C + L +C +C +K+ I + P Sbjct: 10 CEQCGEKVGLNRTICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69 Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98 + R+ + + L + Sbjct: 70 RKERARMASDGVVSKVFIRLFH 91 >gi|269215689|ref|ZP_06159543.1| phosphoribosyltransferase [Slackia exigua ATCC 700122] gi|269131176|gb|EEZ62251.1| phosphoribosyltransferase [Slackia exigua ATCC 700122] Length = 264 Score = 40.3 bits (93), Expect = 0.099, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 36/119 (30%), Gaps = 10/119 (8%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDK 64 + + S+ ++P+ C + C LC C S + I A + Sbjct: 32 RMLASVAQAAIEMLWPTRCAAC----DAPGCVLCPACRSSLPCIDALNACPTCGDPHGRI 87 Query: 65 DPLKS-----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + D P+ + RS + +R K LAI A + + Sbjct: 88 QCARCAMRSMAGSDAPVDECRSAARFEGGMARAMRAYKDQGEQRLAIPFALLIADATPE 146 >gi|258624641|ref|ZP_05719577.1| ComF-related protein [Vibrio mimicus VM603] gi|258583105|gb|EEW07918.1| ComF-related protein [Vibrio mimicus VM603] Length = 265 Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 9/83 (10%) Query: 22 SICPIYSRIIN--LRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + ++ F +C C W + + + +++ P Sbjct: 45 PECHLCRLALDKNSPFGICTACQAWLE----HGYRCARCGLPTLTAVEQCGQCLRQPPPW 100 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 101 RKLICVGDYRFPLSDAVHQLKYQ 123 >gi|166714084|ref|ZP_02245291.1| competence protein F [Xanthomonas oryzae pv. oryzicola BLS256] Length = 219 Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 8/102 (7%) Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---PLKSMQKDL 74 + PS+C + + LC C + + + + + +Q+ Sbjct: 1 MLLPSLCLVCAEAGTADDDLCPACRAALP-DHGHACLCCAAQLFASDGVALCGQCLQEPP 59 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFR 114 PL ++ + Y L+R K+H DLA ++++ M R Sbjct: 60 PLQRVHACFTYRWPVDGLLRRFKFH--QDLAAGRLLSELMAR 99 >gi|189501156|ref|YP_001960626.1| phosphoribosyltransferase [Chlorobium phaeobacteroides BS1] gi|189496597|gb|ACE05145.1| phosphoribosyltransferase [Chlorobium phaeobacteroides BS1] Length = 230 Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 11/90 (12%) Query: 14 ELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 ++ H YP +CP + +C C I+A + + L Sbjct: 6 DILHLFYPCVCPGCGSQLYADAEGICPEC------ISAFDAFGDADASGYAIMELFRRNY 59 Query: 73 DLPLTQIRSVTLYC----DMSCVLVRLLKY 98 ++ LY D ++ +KY Sbjct: 60 PDDTLSGKAWALYRFHKNDRLQRVIHAMKY 89 >gi|254225441|ref|ZP_04919052.1| ComF family protein [Vibrio cholerae V51] gi|125622075|gb|EAZ50398.1| ComF family protein [Vibrio cholerae V51] Length = 286 Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLSQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144 >gi|291549967|emb|CBL26229.1| Predicted amidophosphoribosyltransferases [Ruminococcus torques L2-14] Length = 224 Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 4/83 (4%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATE--HILKNNKDNIDKDPLKSMQKDLPL 76 +YP CP I + +C C ++ + + H K +D + ++ Sbjct: 1 MYPKRCPFCQGISSK--GICDDCRKQVVKVGKIKCIHCGKPLEDETKEYCRDCERRKSNY 58 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 Q RS+ ++ V LKYH Sbjct: 59 EQGRSLWVHIPPVSNSVYRLKYH 81 >gi|262402005|ref|ZP_06078570.1| predicted amidophosphoribosyltransferase [Vibrio sp. RC586] gi|262351977|gb|EEZ01108.1| predicted amidophosphoribosyltransferase [Vibrio sp. RC586] Length = 236 Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 9/94 (9%) Query: 22 SICPIYSRIIN--LRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + ++ F +C C W + + + +++ P Sbjct: 16 PECHLCRLALDKNSPFGVCTACQAWLE----HGYRCACCGLPTLTPVEQCGQCLRQPPPW 71 Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 ++ V Y V LKY + A +A Sbjct: 72 RKLMCVGDYRFPLSDAVHQLKYQRQFWQAPRLAN 105 >gi|313903615|ref|ZP_07837005.1| phosphoribosyltransferase [Thermaerobacter subterraneus DSM 13965] gi|313466168|gb|EFR61692.1| phosphoribosyltransferase [Thermaerobacter subterraneus DSM 13965] Length = 288 Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 7/101 (6%) Query: 20 YPSICPIYSR----IINLRFCLCGHCWSKIHFITATEHILKNNKDNI---DKDPLKSMQK 72 +P C +C C +++ + + + + D+ + Sbjct: 44 WPPYCLGCGADLPHWPPADPAICPRCQARLGHEPGSRCLWCDRPAWLAHPDEPCSQCRTL 103 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 P +R+V Y + L+ +KY D LA ++ + M Sbjct: 104 GPPWVAVRAVGTYRGLLRRLILRMKYEDEPYLAELLGRAMA 144 >gi|284040351|ref|YP_003390281.1| phosphoribosyltransferase [Spirosoma linguale DSM 74] gi|283819644|gb|ADB41482.1| phosphoribosyltransferase [Spirosoma linguale DSM 74] Length = 239 Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 44/111 (39%), Gaps = 12/111 (10%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNID 63 +Q + + + +YP++C ++ + LC C +I+ +H + + ++ Sbjct: 5 VQRIYLLFADFVDLLYPTLCVGCAKSLGFNERVLCTKC--RINLPETYQHREPYDDNLLN 62 Query: 64 KDPLKSMQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQW 111 K K + + +Y + L+ +KY + ++A + W Sbjct: 63 KFAGKVPA------RFVTSFVYFKKGGIVQKLIHKIKYKGQKEVAKEIGCW 107 >gi|60683607|ref|YP_213751.1| amidophosphoribosyl-transferase [Bacteroides fragilis NCTC 9343] gi|253566520|ref|ZP_04843973.1| amidophosphoribosyl-transferase [Bacteroides sp. 3_2_5] gi|265767387|ref|ZP_06095053.1| amidophosphoribosyl-transferase [Bacteroides sp. 2_1_16] gi|60495041|emb|CAH09859.1| possible amidophosphoribosyl-transferase [Bacteroides fragilis NCTC 9343] gi|251944692|gb|EES85167.1| amidophosphoribosyl-transferase [Bacteroides sp. 3_2_5] gi|263252692|gb|EEZ24204.1| amidophosphoribosyl-transferase [Bacteroides sp. 2_1_16] gi|301165122|emb|CBW24690.1| possible amidophosphoribosyl-transferase [Bacteroides fragilis 638R] Length = 230 Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 16/106 (15%) Query: 14 ELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSM- 70 + ++P C + ++ CLC C L ++ KD P++ + Sbjct: 7 SFWSLLFPRCCVVCGAPLSKEEECLCIRC----------NMNLPRTGFHLRKDNPVECLF 56 Query: 71 -QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 + L + S Y S ++ LLKY +L +M ++M Sbjct: 57 WGRIPVLERASSFLFYRKGSDFRRILHLLKYSGYKELGEVMGRYMA 102 >gi|292900950|ref|YP_003540319.1| competence protein [Erwinia amylovora ATCC 49946] gi|291200798|emb|CBJ47932.1| putative competence protein [Erwinia amylovora ATCC 49946] Length = 227 Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 3/80 (3%) Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQ 78 P C + + + LC C ++ + + + +++ P + Sbjct: 5 PPGCWLCAMPLAFAIHGLCSVCLRQL-LVHPACCPRCGLPAGCSRHQCGRCLRRPPPWQR 63 Query: 79 IRSVTLYCDMSCVLVRLLKY 98 + +V+ + LV LK+ Sbjct: 64 LIAVSAWQPPLSQLVNRLKF 83 >gi|257790964|ref|YP_003181570.1| hypothetical protein Elen_1211 [Eggerthella lenta DSM 2243] gi|257474861|gb|ACV55181.1| conserved hypothetical protein [Eggerthella lenta DSM 2243] Length = 274 Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 31/113 (27%), Gaps = 11/113 (9%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 + + ++P+ C + LC C + I + + Sbjct: 41 RGAAEAIAETLWPTRCAVCDTPGE---VLCAPCSLNLSHIDWWRACPRCGAPFGRVQCSE 97 Query: 69 S--------MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + P S + D + +VR K LA MA M Sbjct: 98 CNDVLMSVAGRDEPPFDACTSAVAFDDAAARIVRTWKDAGERRLAGAMATLMA 150 >gi|307701165|ref|ZP_07638187.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16] gi|307613559|gb|EFN92806.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16] Length = 245 Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 29/97 (29%), Gaps = 21/97 (21%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 +++ + +L + P+ C +C C ++I +D + Sbjct: 19 LRAALTDLGGVLLPTECVGCGAW---DEMVCDRCLAQI----------LGEPQVLDLE-- 63 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 + +V Y V K+ R DL Sbjct: 64 --LAGIPGF----AVANYEGAMRRFVLAGKHDPRLDL 94 >gi|325830868|ref|ZP_08164252.1| comF family protein [Eggerthella sp. HGA1] gi|325487275|gb|EGC89718.1| comF family protein [Eggerthella sp. HGA1] Length = 274 Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 31/113 (27%), Gaps = 11/113 (9%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 + + ++P+ C + LC C + I + + Sbjct: 41 RGAAEAIAETLWPTRCAVCDTPGE---VLCAPCSLNLSHIDWWRACPRCGAPFGRVQCSE 97 Query: 69 S--------MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + P S + D + +VR K LA MA M Sbjct: 98 CNDVLMSVAGRDEPPFDACASAVAFDDAAARIVRTWKDAGERRLAGAMATLMA 150 >gi|53715668|ref|YP_101660.1| putative amidophosphoribosyl-transferase [Bacteroides fragilis YCH46] gi|52218533|dbj|BAD51126.1| putative amidophosphoribosyl-transferase [Bacteroides fragilis YCH46] Length = 230 Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 16/106 (15%) Query: 14 ELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSM- 70 + ++P C + ++ CLC C L ++ KD P++ + Sbjct: 7 SFWSLLFPRCCVVCGAPLSKEEECLCIRC----------NMNLPRTGFHLRKDNPVECLF 56 Query: 71 -QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 + L + S Y S ++ LLKY +L +M ++M Sbjct: 57 WGRIPVLERASSFLFYRKGSDFRRILHLLKYSGYKELGEVMGRYMA 102 >gi|212702061|ref|ZP_03310189.1| hypothetical protein DESPIG_00063 [Desulfovibrio piger ATCC 29098] gi|212674576|gb|EEB35059.1| hypothetical protein DESPIG_00063 [Desulfovibrio piger ATCC 29098] Length = 186 Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 17/65 (26%) Query: 52 EHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111 L + + P + Y L+ K+ + LA +MA Sbjct: 1 GLPLPWPAAGQPLLCGECLASPPPWQGLALHGQYRGALRQLILRFKHGGKPALAFLMAGM 60 Query: 112 MFRVL 116 + Sbjct: 61 LLDAA 65 >gi|323524636|ref|YP_004226789.1| phosphoribosyltransferase [Burkholderia sp. CCGE1001] gi|323381638|gb|ADX53729.1| phosphoribosyltransferase [Burkholderia sp. CCGE1001] Length = 261 Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 37/121 (30%), Gaps = 9/121 (7%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKN 57 + ++S + P+ C + + LC C W+ + A + Sbjct: 18 ARGLESAWPRTLQAVLPNACTLCGNL--SHNPLCTFCDESYWNDGALRCDVCAVPLPVTF 75 Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + + P ++ Y L LK+ + LA A+ + R+ E Sbjct: 76 RGRRASYRCADCIAEKPPFDATFALADYRAPLDTLAVGLKFRAQLMLAREFARRLARLAE 135 Query: 118 K 118 Sbjct: 136 D 136 >gi|307565024|ref|ZP_07627541.1| ComF family protein [Prevotella amnii CRIS 21A-A] gi|307346337|gb|EFN91657.1| ComF family protein [Prevotella amnii CRIS 21A-A] Length = 234 Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 10/94 (10%) Query: 14 ELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 + I P C + + ++ +C C +HF T + L D + + Sbjct: 10 SIIDLIAPRECCVCKKRLSLSEDVICATC--TLHF-NRTNYYLSP----YDNELARCFWG 62 Query: 73 DLPLTQIRSVTLYCDMSC--VLVRLLKYHDRTDL 104 +P+ + + Y + + LKY DR D+ Sbjct: 63 KIPIERCVAYLFYQHHTQISNAIYALKYGDRPDI 96 >gi|50954328|ref|YP_061616.1| competence protein F [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950810|gb|AAT88511.1| competence protein F [Leifsonia xyli subsp. xyli str. CTCB07] Length = 249 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 23/109 (21%) Query: 2 PAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61 P ++ +S +++ + P +C C + Sbjct: 9 PVLLSLARSALLDAAGVLLPVRGAGCGA---GDRSVCSVC-----------------ERA 48 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + + LP I S Y + ++ K DRTD A +A+ Sbjct: 49 LSPEVAANAFSGLP---IWSALRYDGAARRILLAFKDGDRTDAATFLAR 94 >gi|262170349|ref|ZP_06038027.1| predicted amidophosphoribosyltransferase [Vibrio mimicus MB-451] gi|261891425|gb|EEY37411.1| predicted amidophosphoribosyltransferase [Vibrio mimicus MB-451] Length = 236 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 9/83 (10%) Query: 22 SICPIYSRIIN--LRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + ++ F +C C W + + + +++ P Sbjct: 16 PECHLCRLALDKNSPFGICTACQAWLE----HGYRCARCGLPTLTAVEQCGQCLRQPPPW 71 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 72 RKLICVGDYRFPLSDAVHQLKYQ 94 >gi|115352956|ref|YP_774795.1| phosphoribosyltransferase [Burkholderia ambifaria AMMD] gi|115282944|gb|ABI88461.1| phosphoribosyltransferase [Burkholderia ambifaria AMMD] Length = 270 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 22/134 (16%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF--------- 47 M ++ V+++ + + P+ C + + +C C W++ Sbjct: 10 MRVVLSRVRALAVRVVALALPNRCALCGNL--SHAVICSACDAAYWNEARLRCDVCAVPL 67 Query: 48 ------ITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101 + + P ++ Y L R LK+H R Sbjct: 68 GSGRPRPRGSRGRHAGVAASFAYRCDACRATPPPFDATLALADYRAPLDGLARGLKFHAR 127 Query: 102 TDL-AIMMAQWMFR 114 L A A+ R Sbjct: 128 LALGAEFAARLAQR 141 >gi|304383729|ref|ZP_07366188.1| competence protein [Prevotella marshii DSM 16973] gi|304335253|gb|EFM01524.1| competence protein [Prevotella marshii DSM 16973] Length = 235 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 10/110 (9%) Query: 7 TVKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 T+ + LF I P +C I R+ LC C++ + T + ++ D + Sbjct: 4 TINRFLRSLFDAISPRVCVICGRRLTIDEEVLCIPCYANLP---RTWY----DERAEDNE 56 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 + +P+ + ++ Y S L+ ++KY + + A + + M Sbjct: 57 LARLFWGRVPIERAVALCFYQSHSYFSRLIYMMKYKNHPEAARYLGRIMA 106 >gi|262166728|ref|ZP_06034465.1| predicted amidophosphoribosyltransferase [Vibrio mimicus VM223] gi|262026444|gb|EEY45112.1| predicted amidophosphoribosyltransferase [Vibrio mimicus VM223] Length = 265 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 9/83 (10%) Query: 22 SICPIYSRII--NLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + + F +C C W + + + +++ P Sbjct: 45 PECHLCRLALDKETPFGVCTACQAWLE----HGYRCARCGLPTLTAVEQCGQCLRQPPPW 100 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 101 RKLICVGDYRFPLSDAVHQLKYQ 123 >gi|172061808|ref|YP_001809460.1| phosphoribosyltransferase [Burkholderia ambifaria MC40-6] gi|171994325|gb|ACB65244.1| phosphoribosyltransferase [Burkholderia ambifaria MC40-6] Length = 270 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 22/134 (16%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF--------- 47 M ++ V+++ + + P+ C + + +C C W++ Sbjct: 10 MRVVLSQVRALAVRVVALALPNRCALCGNL--SHAVICSACDAAYWNEARLRCDVCAVPL 67 Query: 48 ------ITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101 + + P ++ Y L R LK+H R Sbjct: 68 GSGRPRPRGSRGRYAGAAASFAYRCDACRATPPPFDATLALADYRAPLDGLARGLKFHAR 127 Query: 102 TDL-AIMMAQWMFR 114 L A A+ R Sbjct: 128 LALGAEFAARLAQR 141 >gi|28493096|ref|NP_787257.1| comF operon protein 3 [Tropheryma whipplei str. Twist] gi|28476136|gb|AAO44226.1| comF operon protein 3 [Tropheryma whipplei str. Twist] Length = 254 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 23/106 (21%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 I+ + + E+ + YP+ CP LC C++++ D I Sbjct: 13 IVNRLGMLTREMSNLFYPTSCPCCGM---QDTTLCDLCFARLA--ERPYRESLAGLDVI- 66 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 S Y + + K R LA M Sbjct: 67 -----------------SCCDYTPAARAFITAYKVMKRMTLAKFMG 95 >gi|315225633|ref|ZP_07867442.1| phosphoribosyltransferase family protein [Capnocytophaga ochracea F0287] gi|314944450|gb|EFS96490.1| phosphoribosyltransferase family protein [Capnocytophaga ochracea F0287] Length = 229 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 13/106 (12%) Query: 11 IIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 I+ ++ + P+ C ++ I LC +C K+ T L+ + + Sbjct: 2 ILSDILSVLSPAYCRGCGKLLITGEQFLCVNCREKL---EETNFHLQAENLFTQRLTEEC 58 Query: 70 MQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + Y +M+ L+ LKY + + QW+ Sbjct: 59 EVF------AATALFYFKKDNMAQHLIHSLKYKGDEQIGEWLGQWL 98 >gi|153817457|ref|ZP_01970124.1| ComF family protein [Vibrio cholerae NCTC 8457] gi|126512043|gb|EAZ74637.1| ComF family protein [Vibrio cholerae NCTC 8457] Length = 236 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 16 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 71 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 72 RKLMCVGDYRFPLSDAVHQLKYQ 94 >gi|317049908|ref|YP_004117556.1| phosphoribosyltransferase [Pantoea sp. At-9b] gi|316951525|gb|ADU71000.1| phosphoribosyltransferase [Pantoea sp. At-9b] Length = 225 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 P++C + + + LC C ++ I D+ + +Q+ P Q+ Sbjct: 5 PALCWLCRLPLRLAQHGLCSSCLRQLPRI-PERCPCCGLPARADRVCGRCLQRPPPWQQL 63 Query: 80 RSVTLYCDMSCVLVRLLKY 98 V+ Y V LK+ Sbjct: 64 ICVSDYLPPLSHWVNQLKF 82 >gi|251793450|ref|YP_003008179.1| protein GntX [Aggregatibacter aphrophilus NJ8700] gi|247534846|gb|ACS98092.1| protein GntX [Aggregatibacter aphrophilus NJ8700] Length = 228 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 12/98 (12%) Query: 19 IYPSICPIYSRIIN-LRFCLCGHCWSKI-HFITATEHILKNNKDNID-KDPLKSMQKDLP 75 ++ S C + + LC C I F + + +Q++ Sbjct: 3 VFQSNCVHCHAPLKLAKHGLCSRCNRSIWRF---PYCGCCGAELTENALHCGNCLQQEPA 59 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYH-----DRTDLAIMM 108 ++ + Y + L+ K+ DRT LA ++ Sbjct: 60 WDRMVIIGRYNEPLSTLIHRFKFQKQFWLDRT-LARLL 96 >gi|146329020|ref|YP_001209376.1| hypothetical protein DNO_0464 [Dichelobacter nodosus VCS1703A] gi|146232490|gb|ABQ13468.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A] Length = 233 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 5/97 (5%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLT 77 +P C + +I + LC C S I + + + + Sbjct: 14 FFPRHCLLCRKICSDW--LCVDCQSLWQPIVTPHCQTCAARVAQNHRFCQRCARHSPAFD 71 Query: 78 QIRSVTLYCDMSCVLVRLLKY-HDRTDLAIMMAQWMF 113 +V Y + LV KY +RT L M + M Sbjct: 72 AFTAVYRYNAPARTLVLQAKYAANRTALT-YMGEMMA 107 >gi|94985044|ref|YP_604408.1| competence protein ComF, putative [Deinococcus geothermalis DSM 11300] gi|94555325|gb|ABF45239.1| competence protein ComF, putative [Deinococcus geothermalis DSM 11300] Length = 207 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 33/113 (29%), Gaps = 25/113 (22%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 + + P CP + LC C +++ L Sbjct: 1 MQDFLRAFLPRRCPGCDGQLGREAGLCAGCRAQLRPRVERYSPL---------------- 44 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM---------AQWMFRV 115 P + ++ Y ++ VR LK+ +LA ++ A W R Sbjct: 45 SPRPQGHLVTLGPYRGVTRRAVRALKFGGARELAEVLGAVLAAGIPAVWGVRA 97 >gi|254285914|ref|ZP_04960876.1| ComF family protein [Vibrio cholerae AM-19226] gi|150424096|gb|EDN16035.1| ComF family protein [Vibrio cholerae AM-19226] Length = 286 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + +++ P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLRQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 122 RKLMCVGDYRFPLSNAVHQLKYQ 144 >gi|297581558|ref|ZP_06943481.1| ComF family protein [Vibrio cholerae RC385] gi|297534396|gb|EFH73234.1| ComF family protein [Vibrio cholerae RC385] Length = 286 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 21/83 (25%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C N F +C C W + D + + + P Sbjct: 66 PECHFCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144 >gi|15642713|ref|NP_232346.1| ComF-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121726721|ref|ZP_01679946.1| ComF family protein [Vibrio cholerae V52] gi|147675590|ref|YP_001218207.1| ComF family protein [Vibrio cholerae O395] gi|153821299|ref|ZP_01973966.1| ComF family protein [Vibrio cholerae B33] gi|227082833|ref|YP_002811384.1| ComF-related protein [Vibrio cholerae M66-2] gi|229507233|ref|ZP_04396738.1| hypothetical protein VCF_002456 [Vibrio cholerae BX 330286] gi|229509846|ref|ZP_04399327.1| hypothetical protein VCE_001248 [Vibrio cholerae B33] gi|229516967|ref|ZP_04406413.1| hypothetical protein VCC_000988 [Vibrio cholerae RC9] gi|229606739|ref|YP_002877387.1| hypothetical protein VCD_001648 [Vibrio cholerae MJ-1236] gi|254851255|ref|ZP_05240605.1| ComF family protein [Vibrio cholerae MO10] gi|298500467|ref|ZP_07010271.1| ComF family protein [Vibrio cholerae MAK 757] gi|9657316|gb|AAF95859.1| ComF-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121630882|gb|EAX63264.1| ComF family protein [Vibrio cholerae V52] gi|126521231|gb|EAZ78454.1| ComF family protein [Vibrio cholerae B33] gi|146317473|gb|ABQ22012.1| ComF family protein [Vibrio cholerae O395] gi|227010721|gb|ACP06933.1| ComF-related protein [Vibrio cholerae M66-2] gi|227014605|gb|ACP10815.1| ComF-related protein [Vibrio cholerae O395] gi|229346030|gb|EEO11002.1| hypothetical protein VCC_000988 [Vibrio cholerae RC9] gi|229353320|gb|EEO18259.1| hypothetical protein VCE_001248 [Vibrio cholerae B33] gi|229354738|gb|EEO19659.1| hypothetical protein VCF_002456 [Vibrio cholerae BX 330286] gi|229369394|gb|ACQ59817.1| hypothetical protein VCD_001648 [Vibrio cholerae MJ-1236] gi|254846960|gb|EET25374.1| ComF family protein [Vibrio cholerae MO10] gi|297540636|gb|EFH76693.1| ComF family protein [Vibrio cholerae MAK 757] Length = 286 Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144 >gi|291486098|dbj|BAI87173.1| competence protein FC [Bacillus subtilis subsp. natto BEST195] Length = 240 Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 18/95 (18%) Query: 23 ICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKS- 69 IC + + +C C SK+ IT L ++ Sbjct: 13 ICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCE 72 Query: 70 -----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++ L L Q RSV Y DM + K+ Sbjct: 73 VWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFR 107 >gi|303229515|ref|ZP_07316303.1| hypothetical protein HMPREF9684_1843 [Veillonella atypica ACS-134-V-Col7a] gi|302515640|gb|EFL57594.1| hypothetical protein HMPREF9684_1843 [Veillonella atypica ACS-134-V-Col7a] Length = 241 Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 12/27 (44%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHC 41 LF ++P +CP + + C C Sbjct: 3 LFDFLFPPVCPHCGTHVQQQGDWCDAC 29 >gi|303232073|ref|ZP_07318776.1| hypothetical protein HMPREF9321_0196 [Veillonella atypica ACS-049-V-Sch6] gi|302513179|gb|EFL55218.1| hypothetical protein HMPREF9321_0196 [Veillonella atypica ACS-049-V-Sch6] Length = 241 Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 12/27 (44%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHC 41 LF ++P +CP + + C C Sbjct: 3 LFDFLFPPVCPHCGTHVQQQGDWCDAC 29 >gi|257465154|ref|ZP_05629525.1| competence protein F [Actinobacillus minor 202] gi|257450814|gb|EEV24857.1| competence protein F [Actinobacillus minor 202] Length = 229 Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 22/79 (27%), Gaps = 4/79 (5%) Query: 23 ICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNI-DKDPLKSMQKDLPLTQIR 80 C R ++ C C +I T+ + ++ + +I Sbjct: 7 RCFHCDRPLMIASHGFCSQCIKEIT--TSPYCGHCGAALAENSLSCGECLRSEPKWQRIV 64 Query: 81 SVTLYCDMSCVLVRLLKYH 99 + LY + K+ Sbjct: 65 QIALYKAPLADWIHRFKFQ 83 >gi|257440338|ref|ZP_05616093.1| competence protein F-related protein [Faecalibacterium prausnitzii A2-165] gi|257197184|gb|EEU95468.1| competence protein F-related protein [Faecalibacterium prausnitzii A2-165] Length = 259 Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 29/105 (27%), Gaps = 15/105 (14%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 + + +L +YP CP R++ + C C + + + ++ Sbjct: 4 YSGLSRTLRQLRWVLYPRRCPFCDRVLGNQPA-CPDCADGLAELRRAPSMRLRGSEHYLG 62 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + P Y + V KY A A Sbjct: 63 RLDGAAA---PY-------RYTGLVRRAVLRAKYQG----APWAA 93 >gi|167760014|ref|ZP_02432141.1| hypothetical protein CLOSCI_02386 [Clostridium scindens ATCC 35704] gi|167662307|gb|EDS06437.1| hypothetical protein CLOSCI_02386 [Clostridium scindens ATCC 35704] Length = 240 Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIH--FITATEH--ILKNNKDNID 63 ++ I ++P ICP + +CG C ++ I K Sbjct: 4 LRKIYETALRWLWPEICPFCGK--ASSRGICGVCRKELEKLKIQEPRCKRCGKPIARMEK 61 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + ++ L+ + KYH++ + I A+ M Sbjct: 62 EYCHDCSHTHHHYDSGLALWLHGKPVSTSIYQFKYHNQRNFGIWYAREMA 111 >gi|153854474|ref|ZP_01995752.1| hypothetical protein DORLON_01747 [Dorea longicatena DSM 13814] gi|149753000|gb|EDM62931.1| hypothetical protein DORLON_01747 [Dorea longicatena DSM 13814] Length = 242 Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 6/95 (6%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-ATEHILKNNKDNIDKD-- 65 I + ++P +CP ++ +C C K+ + ++ K + Sbjct: 7 NKIKESIISLLWPEVCPFCQKVCRD--GICKECRKKLELVKVREPRCMQCGKQIRSVEQE 64 Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 M + S+ + + V KYH Sbjct: 65 YCYDCMHTHHYYERGLSLWNHKNPVNQSVYQFKYH 99 >gi|283780134|ref|YP_003370889.1| amidophosphoribosyltransferase-like protein [Pirellula staleyi DSM 6068] gi|283438587|gb|ADB17029.1| amidophosphoribosyltransferase-like protein [Pirellula staleyi DSM 6068] Length = 254 Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 23/97 (23%), Gaps = 6/97 (6%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDNI--- 62 ++ ++P C + LC C + I T + Sbjct: 6 ASRLVTAATDLLFPPTCAACQADLATPHGVLLCSSCEATIRSDTLPRCLRCAMPCRTILQ 65 Query: 63 -DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + LP + Y +V KY Sbjct: 66 SSVGCSHCREMKLPFAAAAVLGNYDTSLRAVVIRAKY 102 >gi|241760595|ref|ZP_04758687.1| competence protein [Neisseria flavescens SK114] gi|241318776|gb|EER55302.1| competence protein [Neisseria flavescens SK114] Length = 238 Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIH--FITAT-EHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + ++ LC C + + FI A L +K ++ Sbjct: 17 RCVLCHDSVSD--GLCRGCANDLTEYFIDAAQSCPLCFRHVAGGAVCGSCQKKPPAFDRM 74 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + Y ++R LK+ ++ +A M Sbjct: 75 WASLYYEPPVSSMIRELKHLADLGMSRPLADLM 107 >gi|119471388|ref|ZP_01613860.1| hypothetical protein ATW7_17117 [Alteromonadales bacterium TW-7] gi|119445664|gb|EAW26948.1| hypothetical protein ATW7_17117 [Alteromonadales bacterium TW-7] Length = 224 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 + LF+ ++PS C ++ LC +C + + T+H + + + + M Sbjct: 1 MKGLFNWLFPSYCVQCKSPVSASLGLCEYCLEDLALLDVTKHP-----NLLHRPDIVDMF 55 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + ++ + Y + LK+ Sbjct: 56 PNCEFDRLFACAFYRPPFEQWLTQLKF 82 >gi|320108567|ref|YP_004184157.1| phosphoribosyltransferase [Terriglobus saanensis SP1PR4] gi|319927088|gb|ADV84163.1| phosphoribosyltransferase [Terriglobus saanensis SP1PR4] Length = 281 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 12/110 (10%) Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDK- 64 + L + P C + S ++ R LC C K+ + + ++ ++ Sbjct: 9 AQRSFAPLLSVLAPGECALCSNPLLEARLAPLCQLCLDKLKPVKLLQCVICGEALGMESA 68 Query: 65 ---------DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 P S Y ++ LLK+ +T LA Sbjct: 69 WAHGEEARIPCTICRFSPPPFVLAASFGSYEGTLRQMIHLLKFQGQTSLA 118 >gi|317487364|ref|ZP_07946155.1| comF family protein [Bilophila wadsworthia 3_1_6] gi|316921387|gb|EFV42682.1| comF family protein [Bilophila wadsworthia 3_1_6] Length = 281 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 20/79 (25%), Gaps = 12/79 (15%) Query: 22 SICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 +CP ++ + C C L+ D+ + P R Sbjct: 54 PLCPSCRALLRPRKGGYCPSC-----------GELQPFSDSEPALCETCQKTPPPWEHFR 102 Query: 81 SVTLYCDMSCVLVRLLKYH 99 Y L+ K+ Sbjct: 103 FYGAYSGALKTLLLRGKFG 121 >gi|258620407|ref|ZP_05715445.1| ComF-related protein [Vibrio mimicus VM573] gi|258587286|gb|EEW11997.1| ComF-related protein [Vibrio mimicus VM573] Length = 286 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 9/83 (10%) Query: 22 SICPIYSRIINL--RFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + ++ F +C C W + + + +++ P Sbjct: 66 PECHLCRLALDKNLPFGICTACQAWLE----HGYRCARCGLPTLTAVEQCGQCLRQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 122 RKLICVGDYRFPLSDAVHQLKYQ 144 >gi|288933202|ref|YP_003437261.1| phosphoribosyltransferase [Klebsiella variicola At-22] gi|288887931|gb|ADC56249.1| phosphoribosyltransferase [Klebsiella variicola At-22] Length = 224 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 14/84 (16%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC SR + LC C + +QK P + +V Sbjct: 22 ICSRCSRALLACPPLCPQC--------------GLPAATSHHPCGRCLQKPPPWHWLVAV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106 Y LV+ LK+H R +L Sbjct: 68 NDYRPPLSGLVQQLKFHHRPELGP 91 >gi|170691540|ref|ZP_02882705.1| putative competence protein F-related protein [Burkholderia graminis C4D1M] gi|170143745|gb|EDT11908.1| putative competence protein F-related protein [Burkholderia graminis C4D1M] Length = 233 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 9/102 (8%) Query: 16 FHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKNNKDNIDKDPLK 68 I P+ C + + LCG C W++ + A + Sbjct: 1 MQAILPNACALCGNL--SHNALCGFCDESYWNEGALRCCVCAVPLPVTYRGRRASYCCGD 58 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + P ++ Y L LK+ + LA A+ Sbjct: 59 CIAEKPPFDATFALADYRAPLDTLAVGLKFRAQLVLAREFAR 100 >gi|47217296|emb|CAG12504.1| unnamed protein product [Tetraodon nigroviridis] Length = 607 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%) Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111 P+ Q RS L+ L K +TD A A W Sbjct: 441 NTPPMLQFRSALLHAGYKVSLSHACKNGIKTD-APPAALW 479 >gi|221311496|ref|ZP_03593343.1| competence protein FC [Bacillus subtilis subsp. subtilis str. 168] gi|221315823|ref|ZP_03597628.1| competence protein FC [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320738|ref|ZP_03602032.1| competence protein FC [Bacillus subtilis subsp. subtilis str. JH642] gi|221325023|ref|ZP_03606317.1| competence protein FC [Bacillus subtilis subsp. subtilis str. SMY] Length = 240 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 18/95 (18%) Query: 23 ICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKS- 69 IC + + +C C SK+ IT L ++ Sbjct: 13 ICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCE 72 Query: 70 -----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++ L L Q RSV Y DM + K+ Sbjct: 73 VWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFR 107 >gi|225551762|ref|ZP_03772705.1| conserved hypothetical protein [Borrelia sp. SV1] gi|225371557|gb|EEH00984.1| conserved hypothetical protein [Borrelia sp. SV1] Length = 118 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 7/82 (8%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77 C + L +C +C +K+ I + P Sbjct: 10 CEQCGEKVGLNRSVCPNCTAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69 Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98 + R+ + + L + Sbjct: 70 RKERARMVSDRAASRTFVRLSH 91 >gi|237749574|ref|ZP_04580054.1| amidophosphoribosyltransferase [Oxalobacter formigenes OXCC13] gi|229380936|gb|EEO31027.1| amidophosphoribosyltransferase [Oxalobacter formigenes OXCC13] Length = 253 Score = 38.7 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 8/101 (7%) Query: 21 PSICPIYSRIINLRFCLCGHCW-----SKIHFITATEHILK-NNKDNIDKDPLKSMQKDL 74 PS C + + +C C+ ++ + + L ++ +N + ++K Sbjct: 20 PSPCALC--HSDSNDGICDDCYHRYFSAQCPRCSRCANALPFHDPENENLLCGDCVKKLP 77 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + Y LV LLK+H +A +M + + + Sbjct: 78 SFDETIVAIDYEPPLDQLVHLLKFHANLTMAPIMGKLIVKA 118 >gi|259910061|ref|YP_002650417.1| gluconate periplasmic binding protein [Erwinia pyrifoliae Ep1/96] gi|224965683|emb|CAX57215.1| gluconate periplasmic binding protein [Erwinia pyrifoliae Ep1/96] gi|283480161|emb|CAY76077.1| Competence protein F [Erwinia pyrifoliae DSM 12163] Length = 227 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 3/80 (3%) Query: 21 PSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNK-DNIDKDPLKSMQKDLPLTQ 78 P+ C + + + LC C ++ + + + +++ P + Sbjct: 5 PAGCWLCAMPLTFAIHGLCSVCLRQL-LVQPACCPRCGLPAGGSRHECGRCLRRPPPWQR 63 Query: 79 IRSVTLYCDMSCVLVRLLKY 98 + +V+ + LV LK+ Sbjct: 64 LIAVSAWHPPLSQLVNRLKF 83 >gi|149911005|ref|ZP_01899634.1| ComF-related protein [Moritella sp. PE36] gi|149805908|gb|EDM65894.1| ComF-related protein [Moritella sp. PE36] Length = 237 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 36/97 (37%), Gaps = 4/97 (4%) Query: 11 IIIELFHCIYPSICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PL 67 +I +L + C + I+ F LC C ++ ++ + + ++ Sbjct: 1 MIRKLSMTLLQPRCYLCDMPIDNPQPF-LCLLCLQELPYLPNSHCLRCALPQRKNQQQCD 59 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 + Q+ P Q+ + Y L++ K+ + L Sbjct: 60 ECNQQTPPWQQLIACMSYTLECQYLIKQYKFSHQPQL 96 >gi|194367595|ref|YP_002030205.1| competence protein F [Stenotrophomonas maltophilia R551-3] gi|194350399|gb|ACF53522.1| competence protein F [Stenotrophomonas maltophilia R551-3] Length = 231 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 5/104 (4%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-ILKNNKDNIDKDPLKSMQKD 73 L + P C + + LC C + + + DN ++ Sbjct: 16 LLRVLLPLRCLVCGDPGHDDLDLCRTCLADLPWAGRACLRCALPLPDNALIVCGSCREEA 75 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRV 115 P + LY L+ K+H DLA ++AQ M R Sbjct: 76 PPQAATHASLLYLPPVDQLLVRYKFH--QDLAAGRLLAQLMQRA 117 >gi|451867|gb|AAB59015.1| in Z18629, ORFX is called comForf3; ORFX; putative [Bacillus subtilis] Length = 250 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 18/95 (18%) Query: 23 ICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKS- 69 IC + + +C C SK+ IT L ++ Sbjct: 23 ICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCE 82 Query: 70 -----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++ L L Q RSV Y DM + K+ Sbjct: 83 VWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFR 117 >gi|290512006|ref|ZP_06551374.1| gluconate periplasmic binding protein [Klebsiella sp. 1_1_55] gi|289775796|gb|EFD83796.1| gluconate periplasmic binding protein [Klebsiella sp. 1_1_55] Length = 224 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 14/84 (16%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC SR + LC C + +QK P + +V Sbjct: 22 ICSRCSRALLACPPLCPQC--------------GLPAATSHHPCGRCLQKPPPWHWLVAV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106 Y LV+ LK+H R +L Sbjct: 68 NDYRPPLSGLVQQLKFHHRPELGP 91 >gi|297183677|gb|ADI19802.1| predicted amidophosphoribosyltransferases [uncultured alpha proteobacterium EB000_37G09] Length = 116 Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%), Gaps = 1/42 (2%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKI 45 + ++ + + P+ CP+ + + LC CW + Sbjct: 10 LPGSINQLFRYGLDILLPNACPLCAEHVAA-RGLCSDCWRGL 50 >gi|121535562|ref|ZP_01667370.1| competence protein F, putative [Thermosinus carboxydivorans Nor1] gi|121305890|gb|EAX46824.1| competence protein F, putative [Thermosinus carboxydivorans Nor1] Length = 219 Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 9/29 (31%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHC 41 L IYP CP + C C Sbjct: 7 RALLDLIYPPKCPACRAGVTEHGAWCQPC 35 >gi|317401260|gb|EFV81902.1| hypothetical protein HMPREF0005_01141 [Achromobacter xylosoxidans C54] Length = 154 Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77 P CP+ + LC C + + F + + + + Sbjct: 2 PCDCPLCGARVAGAR-LCEGCETDLADASFAPRCPRCALRLEPD-ALHCAACLARPPAFV 59 Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + + Y + L+ LK R A ++A+ + Sbjct: 60 RTIAAFDYEAPADTLIGQLKTQLRLSAAPVLARLLAHA 97 >gi|220904997|ref|YP_002480309.1| ComF family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869296|gb|ACL49631.1| ComF family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 299 Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/95 (11%), Positives = 24/95 (25%), Gaps = 12/95 (12%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKD------------PLKSMQKDLPLTQIRSVTL 84 LC C + L + + P + L Sbjct: 74 LCPQCRILLAPYAGPRCPLCGLPSAPSPEVSALPHLQRGSLCGHCLTTPPPWSGAAFHGL 133 Query: 85 YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 Y + ++ LK+ LA ++ ++ + Sbjct: 134 YKEALRHVLLRLKFDGHLYLAPLLGAFLQEAARCL 168 >gi|317499400|ref|ZP_07957667.1| amidophosphoribosyltransferase [Lachnospiraceae bacterium 5_1_63FAA] gi|316893272|gb|EFV15487.1| amidophosphoribosyltransferase [Lachnospiraceae bacterium 5_1_63FAA] Length = 166 Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 3/87 (3%) Query: 15 LFHCIYPSICPIY-SRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQ 71 + ++P ICP+ +++ +C C K FI K+ K+ + + Sbjct: 1 MLSFLFPPICPLCAKELLDKGEHICKICSKKQIFIKEPTCYSCGKSMKNQEKEYCSDCRR 60 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + + +Y + +KY Sbjct: 61 HPKNFERGMGLCIYQKPVTDSLAAIKY 87 >gi|16080598|ref|NP_391425.1| component of the DNA transport apparatus [Bacillus subtilis subsp. subtilis str. 168] gi|729159|sp|P39147|COMFC_BACSU RecName: Full=ComF operon protein 3 gi|580842|emb|CAA79228.1| F3 [Bacillus subtilis subsp. subtilis str. 168] gi|1762334|gb|AAC44942.1| involved in transformation [Bacillus subtilis subsp. subtilis str. 168] gi|2636071|emb|CAB15562.1| putative component of the DNA transport apparatus [Bacillus subtilis subsp. subtilis str. 168] Length = 229 Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 18/95 (18%) Query: 23 ICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKS- 69 IC + + +C C SK+ IT L ++ Sbjct: 2 ICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCE 61 Query: 70 -----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++ L L Q RSV Y DM + K+ Sbjct: 62 VWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFR 96 >gi|291544879|emb|CBL17988.1| Predicted amidophosphoribosyltransferases [Ruminococcus sp. 18P13] Length = 237 Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 9/96 (9%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 +I L YP+ C I LC C + + + H K + Sbjct: 5 AIKAWLLDLFYPNRCGCCGVFIPWDQLLCPDCAASLQPVQVCPHCGKVPCNG-------- 56 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 Q+ LP +++ + Y D + + LK + A Sbjct: 57 -QEALPYSRVYAAYAYADRAKDGILSLKRGHNLNFA 91 >gi|330818395|ref|YP_004362100.1| Phosphoribosyltransferase [Burkholderia gladioli BSR3] gi|327370788|gb|AEA62144.1| Phosphoribosyltransferase [Burkholderia gladioli BSR3] Length = 260 Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 15/126 (11%), Positives = 34/126 (26%), Gaps = 11/126 (8%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-----ITATEH 53 T++ L P++C + + R +C C W++ Sbjct: 14 GRFATIRRACERLLVAALPNLCLLCGN--SSRNLICEACDIAYWNESRLRCLQCALPLAA 71 Query: 54 ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + P ++ Y L LK+ R + + + + Sbjct: 72 DRAGQGARLGYRCERCRAAPPPFDATLALGDYRPPLDTLALDLKFGARLAVGRLFGERLA 131 Query: 114 RVLEKI 119 R + Sbjct: 132 RAAADL 137 >gi|121586610|ref|ZP_01676395.1| ComF family protein [Vibrio cholerae 2740-80] gi|121549169|gb|EAX59202.1| ComF family protein [Vibrio cholerae 2740-80] Length = 286 Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 22/81 (27%), Gaps = 5/81 (6%) Query: 22 SICPIYSRI--INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQ 78 C + N F +C C + + + + + + P + Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLA--HGYRCARCGLPTLTPVEQCGQCLGQPPPWRK 123 Query: 79 IRSVTLYCDMSCVLVRLLKYH 99 + V Y V LKY Sbjct: 124 LMCVGDYRFPLSDAVHQLKYQ 144 >gi|54307399|ref|YP_128419.1| amidophosphoribosyltransferase-like protein [Photobacterium profundum SS9] gi|46911819|emb|CAG18617.1| hypothetical ComF-related protein [Photobacterium profundum SS9] Length = 237 Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 4/90 (4%) Query: 22 SICPIYSRIINLRFCL-CGHCWSKIHFITATEHI-LKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + + C HC + HF N + + ++ P ++ Sbjct: 22 PQCQLCQLPLPNNESIWCRHCIA--HFPQPPYCARCGTTTVNPVEQCGQCLRSPPPWHRL 79 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + Y ++ LK++ + LA +A Sbjct: 80 YRLGEYDFPLKQIIHQLKFNGKFWLAKPLA 109 >gi|218264489|ref|ZP_03478322.1| hypothetical protein PRABACTJOHN_04022 [Parabacteroides johnsonii DSM 18315] gi|218221982|gb|EEC94632.1| hypothetical protein PRABACTJOHN_04022 [Parabacteroides johnsonii DSM 18315] Length = 226 Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 17/107 (15%) Query: 11 IIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 I+ +L + YP +C + R ++ +C HC + + D Sbjct: 2 ILNDLLNLFYPRLCLLCQRSLMEGEEHICLHC--------SNHLPYTHFTDMETNPVCLL 53 Query: 70 MQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRT----DLAIMMA 109 +Q + L+ L+ LKYH +L M A Sbjct: 54 LQGKTSFVAA-TALLHFTKGGSGQKLIHSLKYHGNKKLGYELGRMAA 99 >gi|226355389|ref|YP_002785129.1| competence protein ComF [Deinococcus deserti VCD115] gi|226317379|gb|ACO45375.1| putative competence protein ComF [Deinococcus deserti VCD115] Length = 200 Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 16/94 (17%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 P CP + + LC C + + PL S + + Sbjct: 3 PRSCPGCGQQLGPEAGLCSGCRAALK------------PQVQSHSPLSSRAEP----HLV 46 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 ++ Y VR LKY DLA ++ + R Sbjct: 47 TLGAYRGPLRRSVRALKYSGARDLAGILGGALAR 80 >gi|297618073|ref|YP_003703232.1| phosphoribosyltransferase [Syntrophothermus lipocalidus DSM 12680] gi|297145910|gb|ADI02667.1| phosphoribosyltransferase [Syntrophothermus lipocalidus DSM 12680] Length = 239 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 10/107 (9%) Query: 15 LFHCIYP-SICPIYSR----IINLRFCLCGHCWSKIHFI-TATEHILKNNKDNIDKD--P 66 LF ++P + C + + + C C K+ + K D Sbjct: 5 LFDLVFPHNTCALCRKPGLYWTGRPW--CEECDRKLEATRENRPVCDRCGKYLCGGDNQC 62 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 ++ P R+V Y V V+LLK+ R +A+ M + M Sbjct: 63 QDCSEQAPPFFIARAVGPYEKCYKVAVKLLKFMCRGYIAVRMGRMMA 109 >gi|34499837|ref|NP_904052.1| competence protein F [Chromobacterium violaceum ATCC 12472] gi|34105687|gb|AAQ62041.1| competence protein F [Chromobacterium violaceum ATCC 12472] Length = 222 Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 20/82 (24%), Gaps = 1/82 (1%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + LC C + + + + + + Sbjct: 6 CVLCGDARARE-GLCADCRAMLPRMPDERCPRCAEPTIGGAVCGHCQRHPPAFDALHAPY 64 Query: 84 LYCDMSCVLVRLLKYHDRTDLA 105 L+ L+ KY R LA Sbjct: 65 LFGYPLNGLIHAYKYGRRLQLA 86 >gi|237807286|ref|YP_002891726.1| ComF family protein [Tolumonas auensis DSM 9187] gi|237499547|gb|ACQ92140.1| ComF family protein [Tolumonas auensis DSM 9187] Length = 236 Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 8/106 (7%) Query: 10 SIIIELFHCIYPS---ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65 ++ +YP+ IC + + LC HC ++ + H K+ Sbjct: 4 ALYRIFSSALYPACQGICLFCRQPTHQPL-LCHHCAEELPLLD--HHCRLCGSPMAGKED 60 Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + + + Y L+ LKY +T A + + Sbjct: 61 ICGHCLLQPPEWDFLHILADYQFPLTGLIHQLKYQHKTLPAALFGR 106 >gi|290473230|ref|YP_003466095.1| putative periplasmic gluconate-binding protein in GNT I transport system [Xenorhabdus bovienii SS-2004] gi|289172528|emb|CBJ79295.1| putative periplasmic gluconate-binding protein in GNT I transport system [Xenorhabdus bovienii SS-2004] Length = 227 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 14/88 (15%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC I + + +C C ++ D + ++ P + ++ Sbjct: 22 ICHICHQQLKRLKHVCPRC--------------ALPAESRDFPCGRCLKNPPPWQHLIAI 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 T Y L+R KYH LA ++A+ Sbjct: 68 TDYAPPLSRLIRRYKYHGTPQLATVLAR 95 >gi|224534526|ref|ZP_03675102.1| conserved hypothetical protein [Borrelia spielmanii A14S] gi|224514203|gb|EEF84521.1| conserved hypothetical protein [Borrelia spielmanii A14S] Length = 118 Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 7/82 (8%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77 C + L +C +C +K+ I + P Sbjct: 10 CEQCGEKVGLNRTICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69 Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98 + R + + + L + Sbjct: 70 RKERVRMVGDGVVSKVFIRLFH 91 >gi|313669260|ref|YP_004049544.1| hypothetical protein NLA_19950 [Neisseria lactamica ST-640] gi|313006722|emb|CBN88192.1| conserved hypothetical protein [Neisseria lactamica 020-06] Length = 241 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 27/94 (28%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +CG C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICGGCRDDLAAYRTDAANSCPLCFRHIQGGSVCGACQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++R LK+ +A +A M Sbjct: 78 WASLYYEPPVSNMIRALKHLADLSMARPLADLMM 111 >gi|322515352|ref|ZP_08068348.1| competence protein F [Actinobacillus ureae ATCC 25976] gi|322118639|gb|EFX90861.1| competence protein F [Actinobacillus ureae ATCC 25976] Length = 225 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 9/81 (11%), Positives = 24/81 (29%), Gaps = 6/81 (7%) Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79 C + + + +C C+ K I + + + ++ + +I Sbjct: 7 RCIHCRKPLAIAQHTICSSCYRK---IEKSCYCGCCGALLPENQLYCGNCLRNEPKWHRI 63 Query: 80 RSVTLYCDMSCVLVRLLKYHD 100 + Y + K+ D Sbjct: 64 VQIAYYKPPLSDWIHRFKFQD 84 >gi|271962956|ref|YP_003337152.1| phosphoribosyltransferase [Streptosporangium roseum DSM 43021] gi|270506131|gb|ACZ84409.1| phosphoribosyltransferase [Streptosporangium roseum DSM 43021] Length = 268 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 26/100 (26%), Gaps = 20/100 (20%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPL 67 ++ L + P C L C C +++H Sbjct: 33 GAVPTALLDLVLPPRCAGCGV----PGALVCPRCAAELH---------------GRPACR 73 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107 + L + S T Y + + K RT LA Sbjct: 74 MPVPSPPGLPECWSATDYTGAARRAIIAYKERGRTALAHP 113 >gi|332827557|gb|EGK00303.1| hypothetical protein HMPREF9455_03442 [Dysgonomonas gadei ATCC BAA-286] Length = 229 Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 13/106 (12%) Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 ++++ + + +P +C + + R+ +C C + + T L+ D Sbjct: 1 MRNLFRDFLNLFFPDLCVVCNQRLSEGEEHICTDC---LLLLPRTNFHLQP-----DNRL 52 Query: 67 LKSMQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMA 109 + +P QI + Y ++ LKY ++ + Sbjct: 53 EQFFAGRIPFQQI-AAFAYFVKGGSIQSIIHELKYKRNPEIGRFIG 97 >gi|119358139|ref|YP_912783.1| phosphoribosyltransferase [Chlorobium phaeobacteroides DSM 266] gi|119355488|gb|ABL66359.1| phosphoribosyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 231 Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 7/89 (7%) Query: 14 ELFHCIYPSICPIYSR-IINLRFCLCGHCWSKI-HFITATEHILKNNKDNIDKDPLKSMQ 71 L H +YP++C + ++ LC C + F + +I+ + Sbjct: 4 RLLHFVYPNVCVVCQNLLLASERYLCSSCLNGFEPFSEGAA-PERVFLRSIESHFGEDSL 62 Query: 72 KDLPLTQIRSVTLYCDMS-CVLVRLLKYH 99 + + + + + V +KY Sbjct: 63 FERAWCRY---VFHKNSALQQAVHAMKYQ 88 >gi|170723998|ref|YP_001751686.1| competence protein ComF [Pseudomonas putida W619] gi|169762001|gb|ACA75317.1| competence protein ComF [Pseudomonas putida W619] Length = 245 Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 10/88 (11%), Positives = 28/88 (31%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + +C C ++ +++ + ++ Q+ + Sbjct: 20 ACLLCGISAEQPHPICIACEEELPWLSEYCIHCALPLPMAGLTCAQCSRRAPAFEQVVAP 79 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 Y L+ K++ + L +MA+ Sbjct: 80 WYYGFPVDTLISRFKHNRQWPLGRLMAE 107 >gi|307258109|ref|ZP_07539861.1| hypothetical protein appser10_20890 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863472|gb|EFM95403.1| hypothetical protein appser10_20890 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 225 Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 23/80 (28%), Gaps = 6/80 (7%) Query: 23 ICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79 C R+ +C C K+ T + +D + ++ + ++ Sbjct: 7 RCIECHKRLQIAEHGICSRCLKKLDI---TPYCGCCGSLLVDNHRYCGECLRNEPKWHRM 63 Query: 80 RSVTLYCDMSCVLVRLLKYH 99 V Y + K+ Sbjct: 64 VRVCRYSAPMTDWIHRFKFQ 83 >gi|32035475|ref|ZP_00135432.1| COG1040: Predicted amidophosphoribosyltransferases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209458|ref|YP_001054683.1| competence protein F [Actinobacillus pleuropneumoniae L20] gi|165977450|ref|YP_001653043.1| competence protein F [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190151360|ref|YP_001969885.1| Competence protein F [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250438|ref|ZP_07336635.1| competence protein F [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307246942|ref|ZP_07529007.1| hypothetical protein appser1_21320 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249079|ref|ZP_07531086.1| hypothetical protein appser2_20410 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251479|ref|ZP_07533386.1| hypothetical protein appser6_30 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255924|ref|ZP_07537725.1| hypothetical protein appser9_21450 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260377|ref|ZP_07542084.1| hypothetical protein appser11_21580 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262507|ref|ZP_07544152.1| hypothetical protein appser12_20470 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264715|ref|ZP_07546295.1| hypothetical protein appser13_21000 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126098250|gb|ABN75078.1| Competence protein F [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877551|gb|ABY70599.1| competence protein F [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916491|gb|ACE62743.1| Competence protein F [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302650426|gb|EFL80585.1| competence protein F [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852227|gb|EFM84467.1| hypothetical protein appser1_21320 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854367|gb|EFM86563.1| hypothetical protein appser2_20410 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860943|gb|EFM92949.1| hypothetical protein appser6_30 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861192|gb|EFM93185.1| hypothetical protein appser9_21450 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865628|gb|EFM97509.1| hypothetical protein appser11_21580 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306867884|gb|EFM99715.1| hypothetical protein appser12_20470 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870027|gb|EFN01791.1| hypothetical protein appser13_21000 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 225 Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 23/80 (28%), Gaps = 6/80 (7%) Query: 23 ICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79 C R+ +C C K+ T + +D + ++ + ++ Sbjct: 7 RCIECHKRLQIAEHGICSRCLKKLDI---TPYCGCCGSLLVDNHRYCGECLRNEPKWHRM 63 Query: 80 RSVTLYCDMSCVLVRLLKYH 99 V Y + K+ Sbjct: 64 VRVCRYSAPMTDWIHRFKFQ 83 >gi|168699233|ref|ZP_02731510.1| phosphoribosyltransferase [Gemmata obscuriglobus UQM 2246] Length = 244 Score = 38.0 bits (87), Expect = 0.40, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 21/100 (21%), Gaps = 8/100 (8%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRF----CLCGHCWSKI---HFITATEHILKNN 58 + +I +YP C + LC C I F Sbjct: 2 RATSELIRHAIGLVYPDSCLVCDAEEPPDGALRHGLCSECRRAIVSDPFPACPWCAQTVG 61 Query: 59 KDN-IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLK 97 I K + + Y + +K Sbjct: 62 PHADISKGCGECRGAGFAFDSAVRLGPYEGKLRDAILRMK 101 >gi|260599715|ref|YP_003212286.1| protein gntX [Cronobacter turicensis z3032] gi|260218892|emb|CBA34247.1| Protein gntX [Cronobacter turicensis z3032] Length = 251 Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 5/89 (5%) Query: 13 IELFHCIYPSICPIYSRIINL-RFCLCGHCWSKIHFITATEHILKNNKDNID-KDPLKSM 70 E+ P +C + + + + +C C ++ I + + + + Sbjct: 23 KEVVMLTIPGMCWLCRMPLRVPDWGICSRC-QRLRQI--PVCPQCGLPAACETQPCGRCL 79 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 QK ++ + + Y LV K+ Sbjct: 80 QKPPVWQRLLAASEYAPPVSGLVHQFKFQ 108 >gi|157693946|ref|YP_001488408.1| competence protein FC [Bacillus pumilus SAFR-032] gi|157682704|gb|ABV63848.1| competence protein FC [Bacillus pumilus SAFR-032] Length = 228 Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 17/100 (17%) Query: 23 ICPIYSRIINLRFC-----------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 IC I + F LC C + I + D+ Sbjct: 2 ICLICEGHVVTPFTWKSLLLLNDDRLCIACKHHLEKIKRPICPACGRAQSNDQLCQDCSW 61 Query: 72 -KDLP-----LTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 K+ P L + RSV Y D+ ++ K+ T LA Sbjct: 62 WKERPDSTTVLVKNRSVYAYNDLMKDVLSRFKFRGDTALA 101 >gi|325105965|ref|YP_004275619.1| phosphoribosyltransferase [Pedobacter saltans DSM 12145] gi|324974813|gb|ADY53797.1| phosphoribosyltransferase [Pedobacter saltans DSM 12145] Length = 231 Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 13/100 (13%) Query: 9 KSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 + + + +P++C ++ LC C + + T H L+ N L Sbjct: 5 NTYLSDFCSLFFPALCCGCKTTLLRQEELLCTKCIYNLPY---TNHNLQENNQ------L 55 Query: 68 KSMQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDL 104 + + S LY ++ LKY++R DL Sbjct: 56 EKIFWGRVNILGASAFLYFKQGGTVQRIMHQLKYNNRPDL 95 >gi|320532551|ref|ZP_08033358.1| conserved domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320135222|gb|EFW27363.1| conserved domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 168 Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 19/90 (21%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 P+ C R LC C ++ + A +++ D D I+ Sbjct: 33 PTSCAGCGRW---ETALCPRC-REL--LEAEPFAVEHADAAGDLD-------------IQ 73 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 ++ Y +V K R DL+ +MA+ Sbjct: 74 ALASYTGPVRTMVLGWKNGAREDLSEVMAR 103 >gi|291521802|emb|CBK80095.1| Predicted amidophosphoribosyltransferases [Coprococcus catus GD/7] Length = 240 Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 6/87 (6%) Query: 18 CIYPSICPIYSRIIN----LRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQ 71 +YP CP+ ++++ R + G C+ K+ I K + + Sbjct: 9 LLYPPECPVCQKLLSDTEDRRRHIHGDCYRKLRRIVEPMCKRCGKPLLSAQQEYCYDCQR 68 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + S+ +Y +S + KY Sbjct: 69 RPSACEAGHSLWMYDAVSSESIFAYKY 95 >gi|153825531|ref|ZP_01978198.1| ComF family protein [Vibrio cholerae MZO-2] gi|149740816|gb|EDM54907.1| ComF family protein [Vibrio cholerae MZO-2] Length = 286 Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ + Y V LKY Sbjct: 122 RKLMCIGDYRFPLSDAVHQLKYQ 144 >gi|167752290|ref|ZP_02424417.1| hypothetical protein ALIPUT_00534 [Alistipes putredinis DSM 17216] gi|167660531|gb|EDS04661.1| hypothetical protein ALIPUT_00534 [Alistipes putredinis DSM 17216] Length = 236 Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 13/106 (12%) Query: 10 SIIIELFHCIYPSICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 SI+ ++ P +CP+ + C C T D + Sbjct: 2 SILNDIKGLFLPPVCPVCGGELHEGEGAFCMMC--------RTLAPQTGFWRRADNPLAE 53 Query: 69 SMQKDLPLTQIRSVTLYCDMS---CVLVRLLKYHDRTDLAIMMAQW 111 ++ + P+ Q S L+ + KY++R A + W Sbjct: 54 RLRNEFPVVQA-SAFLWFVAGSPWQRAIHGFKYYNRWRTARDLGAW 98 >gi|86739476|ref|YP_479876.1| amidophosphoribosyltransferases-like protein [Frankia sp. CcI3] gi|86566338|gb|ABD10147.1| amidophosphoribosyltransferases-like [Frankia sp. CcI3] Length = 278 Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 27/108 (25%), Gaps = 14/108 (12%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 A + + + L I P C C C +++ + Sbjct: 4 ATLSLLTRNLAILADLIMPLACAGCGDWGASA---CPACVAELR-----------GPVFL 49 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + L + Y D L+ K R DLA + Sbjct: 50 AAAGSLATPWRRGLPPCLAAARYADRVRALLLAYKERGRRDLAGPLGG 97 >gi|291533537|emb|CBL06650.1| hypothetical protein MHY_19270 [Megamonas hypermegale ART12/1] Length = 163 Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 15/92 (16%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 + +I + ++PS CP + + + C C +I ++N D+D Sbjct: 2 LNNIYQAIMQFLFPSHCPSCNAYVEQKGMWCPSCLEEI---------IRNENLAYDEDIR 52 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + + I ++ Y L+ LKY Sbjct: 53 QYI------SPIIAIGKYDKGLKNLIHELKYQ 78 >gi|261867262|ref|YP_003255184.1| protein GntX [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412594|gb|ACX81965.1| protein GntX [Aggregatibacter actinomycetemcomitans D11S-1] Length = 228 Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 12/98 (12%) Query: 19 IYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQKDLP 75 ++ S C + + LC C I + + + ++++ Sbjct: 3 VFQSCCVHCHTPLKLAKHGLCSRC---NRTIQRFAYCGCCGAELAENVLHCGNCLRQEPA 59 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYH-----DRTDLAIMM 108 ++ + Y + L+ K+ DRT LA ++ Sbjct: 60 WDRMVIIGRYNEPLSTLIHRFKFQNQFWLDRT-LARLL 96 >gi|77920166|ref|YP_357981.1| amidophosphoribosyltransferase [Pelobacter carbinolicus DSM 2380] gi|77546249|gb|ABA89811.1| predicted amidophosphoribosyltransferase [Pelobacter carbinolicus DSM 2380] Length = 247 Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 12/88 (13%) Query: 24 CPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 CP L C C A + + D++ ++ + P R + Sbjct: 37 CPACLDAFAPLDSACCPRC--------ALPYPQPSGSDHL---CEACLRHEPPFVWTRCL 85 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 LY V K+H + +A+ Sbjct: 86 GLYEAKLREAVHAFKFHGKVHFDRPLAR 113 >gi|229527355|ref|ZP_04416747.1| hypothetical protein VCG_000420 [Vibrio cholerae 12129(1)] gi|229334987|gb|EEO00472.1| hypothetical protein VCG_000420 [Vibrio cholerae 12129(1)] Length = 286 Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ + Y V LKY Sbjct: 122 RKLMCIGDYRFPLSDAVHQLKYQ 144 >gi|313149331|ref|ZP_07811524.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138098|gb|EFR55458.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 230 Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 16/111 (14%) Query: 8 VKSIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65 + + + ++P C + ++ CLC C L ++ KD Sbjct: 1 MNTWFHSFWSLLFPRCCVVCGSPLSRGEECLCTCC----------NINLPRTGFHLRKDN 50 Query: 66 PLKSM--QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWM 112 P++ + + L + S Y S ++ LLKY +L +M ++M Sbjct: 51 PVECLFWGRIPGLKRASSFLFYRKGSDFRRILHLLKYGGYKELGEVMGRYM 101 >gi|317154568|ref|YP_004122616.1| phosphoribosyltransferase [Desulfovibrio aespoeensis Aspo-2] gi|316944819|gb|ADU63870.1| phosphoribosyltransferase [Desulfovibrio aespoeensis Aspo-2] Length = 260 Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 24/100 (24%), Gaps = 22/100 (22%) Query: 22 SICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--------------- 65 + CP+ S + LC C + T L + + Sbjct: 17 ARCPVCSALTSGGDTPLCPACALALRPRTRGCCALCGDMFGDGNEPGGRKEQGVENQPDH 76 Query: 66 ------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + P ++ Y L+ K+H Sbjct: 77 AQPDTVCGECRLDPPPWDRLHFHGAYSGPLRDLIIDYKFH 116 >gi|163787143|ref|ZP_02181590.1| putative amidophosphoribosyl-transferase [Flavobacteriales bacterium ALC-1] gi|159877031|gb|EDP71088.1| putative amidophosphoribosyl-transferase [Flavobacteriales bacterium ALC-1] Length = 219 Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 39/110 (35%), Gaps = 24/110 (21%) Query: 18 CIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPL 76 +P++C + ++ + C C ++ N + + +K + Sbjct: 1 MFFPAVCEACNTVLGDNETVVCISCRHQLP---------VTNFHFDNSETVKKIV----Y 47 Query: 77 TQIR----SVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 ++R + L+ + L+ LKY ++ + QW+ ++ Sbjct: 48 GRVRLKNATALLHFSKKGIVQQLLHNLKYRGHEQISTFLGQWL---GAEL 94 >gi|134297041|ref|YP_001120776.1| phosphoribosyltransferase [Burkholderia vietnamiensis G4] gi|134140198|gb|ABO55941.1| phosphoribosyltransferase [Burkholderia vietnamiensis G4] Length = 270 Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 15/127 (11%), Positives = 31/127 (24%), Gaps = 22/127 (17%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF------------ 47 ++ + ++ + P+ C + + +C C W++ Sbjct: 13 VLSHARVLLTHVIAAALPNRCALCGNL--SHNIICDACDAAYWNEARLRCEVCALPLGVG 70 Query: 48 ---ITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 P ++ Y L R LK+ R L Sbjct: 71 RASTRRPGGRHGGADATSAYRCDGCRATPPPFDATLALADYRAPLDGLARGLKFRARLAL 130 Query: 105 -AIMMAQ 110 A A+ Sbjct: 131 GAEFAAR 137 >gi|52426289|ref|YP_089426.1| ComFC protein [Mannheimia succiniciproducens MBEL55E] gi|52308341|gb|AAU38841.1| ComFC protein [Mannheimia succiniciproducens MBEL55E] Length = 228 Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 12/94 (12%) Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQKDLPLTQI 79 C R + LC C +I + + + +Q ++ Sbjct: 7 RCIYCQRKLAIGSHGLCCSCNKQIR---RFNYCGVCGSELAENTLGCGNCLQNRPAWHRM 63 Query: 80 RSVTLYCDMSCVLVRLLKYH-----DRTDLAIMM 108 + Y L+ K+ DRT LA ++ Sbjct: 64 VIIGAYKMPLSSLIHRFKFQNSFYFDRT-LARLL 96 >gi|167822561|ref|ZP_02454032.1| putative competence protein [Burkholderia pseudomallei 9] Length = 123 Score = 38.0 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 27/104 (25%), Gaps = 7/104 (6%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55 + + ++ P+ C + + +C C W++ L Sbjct: 11 IRTMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + + P ++ Y L LK+ Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFR 112 >gi|83721230|ref|YP_440981.1| ComF family protein [Burkholderia thailandensis E264] gi|167617774|ref|ZP_02386405.1| ComF family protein [Burkholderia thailandensis Bt4] gi|257140365|ref|ZP_05588627.1| ComF family protein [Burkholderia thailandensis E264] gi|83655055|gb|ABC39118.1| ComF family protein [Burkholderia thailandensis E264] Length = 255 Score = 38.0 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 30/113 (26%), Gaps = 7/113 (6%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHILKNNKDNIDKD 65 ++ P+ C + + +C C W++ L + + Sbjct: 21 VLARFSAAALPNRCALCGNL--SHRTICDCCDDAYWNEARLRCPRCALPLPGARGAMRYR 78 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + ++ Y L LK+ R L + + R+ Sbjct: 79 CGACARMPPRFDATLALADYRAPLDSLALDLKFRARLALGREFGERLARLATD 131 >gi|333029574|ref|ZP_08457635.1| phosphoribosyltransferase [Bacteroides coprosuis DSM 18011] gi|332740171|gb|EGJ70653.1| phosphoribosyltransferase [Bacteroides coprosuis DSM 18011] Length = 230 Score = 38.0 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 9 KSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHF 47 K ++ + IYP C I R + +C C +++ Sbjct: 3 KKLLTSVLDVIYPPTCMICQRALYEKEQSICLSCLNELPL 42 >gi|304391089|ref|ZP_07373041.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325972|gb|EFL93218.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 259 Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 16/92 (17%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 EL + P+ C +C C +++ L+ +D ++ Sbjct: 12 GELGKVLLPTECVGCGAW---DEEICDTCLAQM---LGCPFPLQIGED------DDNVTD 59 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 ++ Y +V K+ R DL Sbjct: 60 VPVF----AIAKYDGPMRRVVLTGKHDKRRDL 87 >gi|268612018|ref|ZP_06145745.1| competence protein [Ruminococcus flavefaciens FD-1] Length = 219 Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 16/33 (48%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKI 45 +L H +YP+ CP+ +I C C K+ Sbjct: 7 RKLIHLLYPNRCPVCGEVIGANDRFCTDCEGKL 39 >gi|188586866|ref|YP_001918411.1| amidophosphoribosyltransferase-like protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351553|gb|ACB85823.1| amidophosphoribosyltransferase-like protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 303 Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 15/104 (14%) Query: 9 KSIIIELFHCIYPSICPIYSRI--INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + + +YP + + F +C C + E + +N P Sbjct: 26 REQVSTQGRLVYPPYTFLGDNLYLSETDF-ICADC------LEKLELACFSVSENYSLKP 78 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 ++ + T++ Y L+ LKY +LAI + + Sbjct: 79 MELI------TEVIYAGNYRGYMKELILRLKYQGEKELAIPLGK 116 >gi|88801440|ref|ZP_01116968.1| putative amidophosphoribosyl-transferase [Polaribacter irgensii 23-P] gi|88782098|gb|EAR13275.1| putative amidophosphoribosyl-transferase [Polaribacter irgensii 23-P] Length = 245 Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 31/103 (30%), Gaps = 7/103 (6%) Query: 11 IIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 ++ +L YP IC S+ +I +C C + + Sbjct: 20 LLKDLRALFYPRICANCSQQLIQNESIICTFCRHDLPLTHFQSYTKNKINAIFYGRVTIE 79 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 L + ++ L+ LKY ++ I W+ Sbjct: 80 KAFALLFLRK------KGITKNLIHKLKYQGTEEIGIFFGNWI 116 >gi|332524133|ref|ZP_08400363.1| putative phosphoribosyl transferase [Rubrivivax benzoatilyticus JA2] gi|332107472|gb|EGJ08696.1| putative phosphoribosyl transferase [Rubrivivax benzoatilyticus JA2] Length = 228 Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 21/83 (25%), Gaps = 3/83 (3%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 P C + R LC C ++ + Q P Sbjct: 11 PGQCEVCRSAT--RAALCADCVARFA-APRPRCRRCALPLAAGDLCGECRQHPPPFEHTA 67 Query: 81 SVTLYCDMSCVLVRLLKYHDRTD 103 Y LV LK+H R + Sbjct: 68 CAADYGFPWDGLVAALKFHGRVE 90 >gi|315604875|ref|ZP_07879933.1| competence protein F [Actinomyces sp. oral taxon 180 str. F0310] gi|315313414|gb|EFU61473.1| competence protein F [Actinomyces sp. oral taxon 180 str. F0310] Length = 247 Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 29/104 (27%), Gaps = 19/104 (18%) Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64 + + ++ EL + P C LC C + + + + + Sbjct: 4 PRAARDLVRELVGALLPVQCAGCLAW---DQVLCPSC----RALARRPPMNADVEGHRGP 56 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM 108 P + Y +V K+ RTDL + Sbjct: 57 LPGVFLGD------------YGGALRRIVLSAKHSARTDLGEFL 88 >gi|307824520|ref|ZP_07654745.1| phosphoribosyltransferase [Methylobacter tundripaludum SV96] gi|307734504|gb|EFO05356.1| phosphoribosyltransferase [Methylobacter tundripaludum SV96] Length = 235 Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 7/89 (7%), Positives = 26/89 (29%), Gaps = 9/89 (10%) Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------PLKSM 70 + P C + + +C C++ + + ++ + + Sbjct: 13 DYLLPPTCILCGNPGHNSRDICHSCYTHLP---RNNLCCYRCAEILETPTTAPVLCGRCL 69 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + + ++ L+ LK+ Sbjct: 70 SRHPAFDETYAPFIHQGAIRHLIGTLKFG 98 >gi|227873146|ref|ZP_03991437.1| possible competence protein F [Oribacterium sinus F0268] gi|227840977|gb|EEJ51316.1| possible competence protein F [Oribacterium sinus F0268] Length = 252 Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 9/95 (9%) Query: 15 LFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQ 71 + + ++P C + + + + +C C + + +D + + Sbjct: 22 IINALFPPRCILCDELTESGKEEICPACKAYEKIMEEPVCKKCGRGILLDTEEYCGNCKR 81 Query: 72 KDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTD 103 + + LY ++ LV LKY R D Sbjct: 82 HGFSFSTG--MMLYELTEEVEDALVL-LKYKGRRD 113 >gi|166030540|ref|ZP_02233369.1| hypothetical protein DORFOR_00201 [Dorea formicigenerans ATCC 27755] gi|166029702|gb|EDR48459.1| hypothetical protein DORFOR_00201 [Dorea formicigenerans ATCC 27755] Length = 266 Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT----ATEHILKNNKDNIDKDPLK 68 ++ +PSICP ++ R +C C + + K + + Sbjct: 31 EKVLDIFWPSICPFCGKV--NRGGVCPLCRKAVEKLEIHEPRCLKCGKPIRCEEREFCHD 88 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + SV L+ + LKYH++ +A AQ Sbjct: 89 CYNTEHIYERGLSVWLHKPPVNQAIYQLKYHNQRYVAKYFAQ 130 >gi|298528419|ref|ZP_07015823.1| phosphoribosyltransferase [Desulfonatronospira thiodismutans ASO3-1] gi|298512071|gb|EFI35973.1| phosphoribosyltransferase [Desulfonatronospira thiodismutans ASO3-1] Length = 262 Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 29/102 (28%), Gaps = 7/102 (6%) Query: 23 ICPIYSRIIN---LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLP 75 C I + + +C C KI +++ L + P Sbjct: 38 RCLICGMVRDKETGPDTMCPACLEKIKIRRRGFCPGCAKIYTLEEASPYYCLDCRTRPFP 97 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + + Y D L+ K+ L ++ + + + Sbjct: 98 WSGLGFFGPYQDRLRELILCFKFKGDLGLGRVLGGMLVQAGQ 139 >gi|256396692|ref|YP_003118256.1| hypothetical protein Caci_7591 [Catenulispora acidiphila DSM 44928] gi|256362918|gb|ACU76415.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928] Length = 244 Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 16/95 (16%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C R LC C + + P +++ + +V Sbjct: 20 CGGCGRPQPSGEPLCEDC----------------DALLAEGGPWRTLAAVPGTPRTHAVA 63 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 Y D ++ K RTDL + + + R + + Sbjct: 64 RYEDPIRTMLIGYKERGRTDLRRALGRALARAVAQ 98 >gi|254520269|ref|ZP_05132325.1| ComF protein [Clostridium sp. 7_2_43FAA] gi|226914018|gb|EEH99219.1| ComF protein [Clostridium sp. 7_2_43FAA] Length = 214 Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%) Query: 2 PAIIQTVKSIIIELFHCIYPS--ICPIYSRIINLRFCLCGHCWSKI 45 +I+ ++ II EL IYP C + +C C SKI Sbjct: 3 KGLIKLLREIIDELLDIIYPPKNKCITCDNEV---IGVCPICKSKI 45 >gi|298489185|ref|ZP_07007204.1| Competence protein F [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156267|gb|EFH97368.1| Competence protein F [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 244 Score = 37.6 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 23/75 (30%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ Q+ + Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGGQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDSLITRFKH 95 >gi|218668080|ref|YP_002424749.1| competence protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218520293|gb|ACK80879.1| competence protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 263 Score = 37.6 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 26/98 (26%), Gaps = 5/98 (5%) Query: 13 IELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 H ++P C LC C+ + A + D Sbjct: 42 GRFNHWLFPERCRACG----APGAPLCAGCFGDWPRLPAERCSYCALPLLDNGDCPVCSV 97 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + + + +Y + + K+ R D +A Sbjct: 98 EAPAYDHVYTPFIYAEPLNTAIIAWKFQRRLDWTRPLA 135 >gi|325145262|gb|EGC67541.1| comF/gntX family protein [Neisseria meningitidis M01-240013] Length = 241 Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 25/94 (26%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRNDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111 >gi|298242604|ref|ZP_06966411.1| hypothetical protein Krac_11086 [Ktedonobacter racemifer DSM 44963] gi|297555658|gb|EFH89522.1| hypothetical protein Krac_11086 [Ktedonobacter racemifer DSM 44963] Length = 142 Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 6/104 (5%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 ++ T+K++ E ++P C R LC C +++ H Sbjct: 11 LLATLKTLGREGLDVLFPPRCASCQR---RGHVLCPRCQARLQAQALPTHP-PCPLCTQR 66 Query: 64 KDPLKSMQKDLP--LTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 P + + I + Y D ++ LKY T LA Sbjct: 67 GGPNACLLYPPRGHMHDIYAFGPYADPLRACIKTLKYDGETRLA 110 >gi|226939033|ref|YP_002794104.1| ComF [Laribacter hongkongensis HLHK9] gi|226713957|gb|ACO73095.1| ComF [Laribacter hongkongensis HLHK9] Length = 234 Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 26/93 (27%), Gaps = 2/93 (2%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + + +C C + + + + + + + + + Sbjct: 23 CGLCGQPADRP--VCAACLAALPQLAGSACPRCGVRHPAGGVCHRCRLRPPAFDALHAGH 80 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 Y ++ KY A +MA M Sbjct: 81 AYQWPLSAVLHRCKYGGDLQQAGLMAYLMLAAA 113 >gi|110835082|ref|YP_693941.1| hypothetical protein ABO_2221 [Alcanivorax borkumensis SK2] gi|110648193|emb|CAL17669.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 247 Score = 37.6 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 35/107 (32%), Gaps = 11/107 (10%) Query: 1 MPAIIQTVKSII-IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK 59 MP ++ + F+ I PS CP+ + + LC C + +T Sbjct: 1 MPVNLKAATKVYCSTFFNRINPSPCPLCGK--SESGALCTDCLRLLARVTGPVCRCGLPH 58 Query: 60 DN--------IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + + + +++ + +S Y L+ K+ Sbjct: 59 GDTPLPSPDSLPPLCGRCIRQPPAFSASQSPLQYGFPLDALITRYKH 105 >gi|319638737|ref|ZP_07993496.1| competence protein [Neisseria mucosa C102] gi|317399978|gb|EFV80640.1| competence protein [Neisseria mucosa C102] Length = 238 Score = 37.6 bits (86), Expect = 0.64, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 5/93 (5%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIH--FITAT-EHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + ++ LC C + + FI A L +K ++ Sbjct: 17 RCVLCHDSVSD--GLCRGCANDLTEYFIDAAQSCPLCFRHVTGGAVCGGCQKKPPAFDRM 74 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + Y ++R LK+ ++ +A M Sbjct: 75 WASLYYEPPVSSMIRELKHLADLGMSRPLADLM 107 >gi|15595006|ref|NP_212795.1| hypothetical protein BB0661 [Borrelia burgdorferi B31] gi|2688597|gb|AAC67015.1| predicted coding region BB0661 [Borrelia burgdorferi B31] Length = 123 Score = 37.6 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 26/99 (26%), Gaps = 8/99 (8%) Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 L + C + L +C +C +K+ I + Sbjct: 5 RLAKVNFEVFCEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSP 64 Query: 74 ------LPLTQI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104 P + R+ + + VRL + D+ Sbjct: 65 FQELKEKPFKRKERARMVSDRAASKTFVRLFHFGINIDI 103 >gi|206559143|ref|YP_002229903.1| hypothetical protein BCAL0746 [Burkholderia cenocepacia J2315] gi|198035180|emb|CAR51054.1| conserved hypothetical protein [Burkholderia cenocepacia J2315] Length = 256 Score = 37.2 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 19/135 (14%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHFIT------- 49 M ++ V+++++ + P+ C + + +CG C W++ Sbjct: 1 MRVVLSQVRTLVVRVAAVALPNRCALCGNL--SHEVICGACDAAYWNEARLRCAVCALPL 58 Query: 50 ATEHILKNNKDNIDKD------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 H P ++ Y L R LK+H R Sbjct: 59 GVGHARSLGGRRTGAGRATAYRCDACRTAPPPFDATLALADYRAPLDGLARGLKFHARLA 118 Query: 104 LAIMMAQWMFRVLEK 118 L A + R+++ Sbjct: 119 LGGEFAARLARLVDD 133 >gi|218768948|ref|YP_002343460.1| hypothetical protein NMA2217 [Neisseria meningitidis Z2491] gi|121052956|emb|CAM09310.1| hypothetical protein NMA2217 [Neisseria meningitidis Z2491] Length = 241 Score = 37.2 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111 >gi|325143108|gb|EGC65455.1| comF/gntX family protein [Neisseria meningitidis 961-5945] gi|325197553|gb|ADY93009.1| comF/gntX family protein [Neisseria meningitidis G2136] Length = 241 Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111 >gi|198282558|ref|YP_002218879.1| competence protein F [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247079|gb|ACH82672.1| competence protein F [Acidithiobacillus ferrooxidans ATCC 53993] Length = 237 Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 26/98 (26%), Gaps = 5/98 (5%) Query: 13 IELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 H ++P C LC C+ + A + D Sbjct: 16 GRFNHWLFPERCRACG----APGAPLCAGCFGDWPRLPAERCSYCALPLLDNGDCPVCSV 71 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + + + +Y + + K+ R D +A Sbjct: 72 EAPAYDHVYTPFIYAEPLNTAIIAWKFQRRLDWTRPLA 109 >gi|226227086|ref|YP_002761192.1| hypothetical protein GAU_1680 [Gemmatimonas aurantiaca T-27] gi|226090277|dbj|BAH38722.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 285 Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 28/130 (21%) Query: 13 IELFHCIYPSICPIYSR----IINLRFCLCGHCWSKIHFITATEHILKNNKDN------- 61 L + P C + R +CG C +++ +T + + Sbjct: 12 RSLLDFLMPGACVLCRRPHAPHSTPDGIVCGTCMARVVPLTLPQCYRCGHPRLSLTLALP 71 Query: 62 -IDKDPLKSMQKD---------------LPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDL 104 P ++ + +RSV LV LKY + Sbjct: 72 PARPAPGEAAAMPSTVELSPCRWCARLAPEIRAVRSVCRMDQGSGGELVHALKYQGWHVV 131 Query: 105 AIMMAQWMFR 114 A MA+ M R Sbjct: 132 ATPMARRMAR 141 >gi|315226408|ref|ZP_07868196.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105] gi|315120540|gb|EFT83672.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105] Length = 238 Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 18/103 (17%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIH-FITATEHILKNNKDNIDKDPLKS 69 + ++ ++P CP R LC C + F++ + + Sbjct: 5 FLSDMRFLLFPRCCPGCGR---ADRILCPACSAAFSLFLSRNLYDHSLSGG--------- 52 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 P Q+ S +LY + + K H +L ++M Sbjct: 53 -----PSLQVHSCSLYQGLVRQTILAWKDHGDVELDGPFGRFM 90 >gi|218249397|ref|YP_002375161.1| hypothetical protein BbuZS7_0681 [Borrelia burgdorferi ZS7] gi|226321359|ref|ZP_03796886.1| conserved hypothetical protein [Borrelia burgdorferi Bol26] gi|218164585|gb|ACK74646.1| conserved hypothetical protein [Borrelia burgdorferi ZS7] gi|226233155|gb|EEH31907.1| conserved hypothetical protein [Borrelia burgdorferi Bol26] Length = 118 Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 8/89 (8%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77 C + L +C +C +K+ I + P Sbjct: 10 CEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVPAFGEGCPNCHYSPFQELKEKPFK 69 Query: 78 QI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104 + R+ + + VRL + D+ Sbjct: 70 RKERARMVSDRAASKTFVRLFHFGINIDI 98 >gi|325203384|gb|ADY98837.1| comF/gntX family protein [Neisseria meningitidis M01-240355] Length = 241 Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111 >gi|260655347|ref|ZP_05860835.1| ComF family protein [Jonquetella anthropi E3_33 E1] gi|260629795|gb|EEX47989.1| ComF family protein [Jonquetella anthropi E3_33 E1] Length = 217 Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 11/95 (11%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + L H ++P C LC C + + + ++ +K + Sbjct: 3 LAEALCHLLWPQQCASCGAPGE---ALCSDCEAMLPPRLSPVCLVCGAPAPCKTHGVKYV 59 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 T + + LV KY +LA Sbjct: 60 LHSR--------TPHEGTARELVLKSKYGRWGELA 86 >gi|257064230|ref|YP_003143902.1| predicted amidophosphoribosyltransferase [Slackia heliotrinireducens DSM 20476] gi|256791883|gb|ACV22553.1| predicted amidophosphoribosyltransferase [Slackia heliotrinireducens DSM 20476] Length = 230 Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 9/106 (8%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA-TEHILKNNKDNIDKDPLKSMQKD 73 L ++P+ C R LC C + +I A + + + + + Sbjct: 6 LLETLWPTRCAGCER---AGKVLCDDCIRNMEYIDAYAACPICGDPAGLRVCTRCNAPVE 62 Query: 74 LPLTQI-----RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 P ++ RS ++ + K T L A + R Sbjct: 63 DPEHRVRTLECRSAAMFTGRMAKAIHAYKDAGETRLYKPFALILAR 108 >gi|326772049|ref|ZP_08231334.1| hypothetical protein HMPREF0059_00431 [Actinomyces viscosus C505] gi|326638182|gb|EGE39083.1| hypothetical protein HMPREF0059_00431 [Actinomyces viscosus C505] Length = 230 Score = 37.2 bits (85), Expect = 0.71, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 19/90 (21%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 P+ C R LC C ++ + A +++ D D Sbjct: 88 PTSCAGCGRW---ETALCPQC-REL--LEAAPFAVEHADAADDLDIW------------- 128 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 ++ Y +V K R DL+ +MA+ Sbjct: 129 ALASYTGPVRTMVLGWKNGAREDLSEVMAR 158 >gi|302185790|ref|ZP_07262463.1| phosphoribosyltransferase [Pseudomonas syringae pv. syringae 642] Length = 244 Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ TQ+ + Sbjct: 21 CLLCDERSEVPAPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKRPPGFTQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDGLITRFKH 95 >gi|111220759|ref|YP_711553.1| hypothetical protein FRAAL1302 [Frankia alni ACN14a] gi|111148291|emb|CAJ59963.1| hypothetical protein; putative Purine/pyrimidine phosphoribosyl transferase domain [Frankia alni ACN14a] Length = 291 Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 18/114 (15%) Query: 1 MPAIIQTVKSIIIE----LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK 56 +P++ + + ++I L + P C +C C +++ Sbjct: 20 LPSMARALLPLLIRNLAILTDLVVPLACAGCG---GRGASVCPACAAELR---------- 66 Query: 57 NNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + + + L +V Y L+ K R D A + Sbjct: 67 -GPAFLAAAGPMATPRRRGLPPCLAVARYGGRVRSLLLAYKERGRVDAARPLGG 119 >gi|328955032|ref|YP_004372365.1| hypothetical protein Corgl_0432 [Coriobacterium glomerans PW2] gi|328455356|gb|AEB06550.1| hypothetical protein Corgl_0432 [Coriobacterium glomerans PW2] Length = 256 Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 3/103 (2%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 + P+ C R +L LC C S++ I + + Sbjct: 28 ALEILSPTRCAACERPGSL---LCDRCRSELSLIDPRHACTACGAPFGELVCTECRGSPT 84 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 L + + ++R+ K LA +A + + Sbjct: 85 GLDLCLAAAAFEGPLRRVIRVYKDAGERRLAETLAGLIADAVA 127 >gi|304389097|ref|ZP_07371141.1| ComF/gntX family protein [Neisseria meningitidis ATCC 13091] gi|304336970|gb|EFM03160.1| ComF/gntX family protein [Neisseria meningitidis ATCC 13091] Length = 241 Score = 37.2 bits (85), Expect = 0.74, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111 >gi|167736936|ref|ZP_02409710.1| putative competence protein [Burkholderia pseudomallei 14] Length = 111 Score = 37.2 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 12/103 (11%), Positives = 27/103 (26%), Gaps = 7/103 (6%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55 + A+ ++ P+ C + + +C C W++ L Sbjct: 11 IRAMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 + + P ++ Y L LK+ Sbjct: 69 PGARGATRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKF 111 >gi|261391800|emb|CAX49255.1| putative GntX-like protein [Neisseria meningitidis 8013] Length = 241 Score = 37.2 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111 >gi|227498003|ref|ZP_03928179.1| competence protein F [Actinomyces urogenitalis DSM 15434] gi|226832582|gb|EEH64965.1| competence protein F [Actinomyces urogenitalis DSM 15434] Length = 258 Score = 37.2 bits (85), Expect = 0.76, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 23/120 (19%) Query: 1 MPAIIQTVKSIIIELFH----CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK 56 +PA + V + L H + P+ C LC C S ++ Sbjct: 21 LPAHARRVARWLQRLVHDAAGALIPARCAGCGTW---DTRLCERCRSLLN---------G 68 Query: 57 NNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 + I D + + I ++ Y LV K R DLA +M + R Sbjct: 69 PLSEVIHADGAEDLP-------IHALAAYAGPVRALVLGWKNGGREDLAEVMHEAGQRAA 121 >gi|218507208|ref|ZP_03505086.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium etli Brasil 5] Length = 49 Score = 37.2 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 11/37 (29%), Gaps = 1/37 (2%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGH 40 Q ++ L +YP C + LC Sbjct: 14 RTQLLRPFSA-LADFLYPPACSVCGVSTGGHRGLCAK 49 >gi|114565757|ref|YP_752911.1| phosphoribosyltransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336692|gb|ABI67540.1| phosphoribosyltransferase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 239 Score = 37.2 bits (85), Expect = 0.77, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 40/109 (36%), Gaps = 6/109 (5%) Query: 11 IIIELFHCIYP-SICPIYSRI--INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 +I + ++P + C I + R+ C C ++ + + + + + Sbjct: 1 MIDLIMDILFPQTACYICREPGRYSCRYPWCDACEDEMDRLKKCLSLCDHCGKYLGEGEN 60 Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 ++ Q R+V Y + + V++ K+ R LA M M Sbjct: 61 LCVECRQNPPSFNIARAVGPYEEPFRIAVKVFKFLGRKQLAKKMGDMMA 109 >gi|296105107|ref|YP_003615253.1| gluconate periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059566|gb|ADF64304.1| gluconate periplasmic binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 215 Score = 37.2 bits (85), Expect = 0.79, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 14/76 (18%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 +C + +R + R C C + + ++K P + + +V Sbjct: 10 VCSVCTRSLASRITTCPQC--------------GLPAYSPQFPCGRCLKKPPPWSALVAV 55 Query: 83 TLYCDMSCVLVRLLKY 98 Y L+ LK+ Sbjct: 56 DDYVPPLSRLIHALKF 71 >gi|167717917|ref|ZP_02401153.1| putative competence protein [Burkholderia pseudomallei DM98] Length = 119 Score = 37.2 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 27/104 (25%), Gaps = 7/104 (6%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55 + + ++ P+ C + + +C C W++ L Sbjct: 11 IRTMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + + P ++ Y L LK+ Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFR 112 >gi|226320502|ref|ZP_03796068.1| conserved hypothetical protein [Borrelia burgdorferi 29805] gi|226234144|gb|EEH32859.1| conserved hypothetical protein [Borrelia burgdorferi 29805] gi|312149147|gb|ADQ29218.1| conserved hypothetical protein [Borrelia burgdorferi N40] Length = 118 Score = 37.2 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 8/89 (8%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77 C + L +C +C +K+ I + P Sbjct: 10 CEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69 Query: 78 QI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104 + R+ + + VRL + D+ Sbjct: 70 RKERARMVSDRAASKTFVRLFHFGINIDI 98 >gi|289674355|ref|ZP_06495245.1| phosphoribosyltransferase [Pseudomonas syringae pv. syringae FF5] Length = 215 Score = 37.2 bits (85), Expect = 0.82, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ TQ+ + Sbjct: 21 CLLCDERSEVPTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDGLITRFKH 95 >gi|124009197|ref|ZP_01693878.1| competence protein [Microscilla marina ATCC 23134] gi|123985182|gb|EAY25116.1| competence protein [Microscilla marina ATCC 23134] Length = 241 Score = 37.2 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 13/104 (12%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPL 67 + + F I+P+ C + LC C + H+ K+ ++ + P+ Sbjct: 10 LADFFSLIFPNYCLGCEAPLTKGEKQLCTRCLYDLP--QTNYHLHKDNVLSQRFWGRVPI 67 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111 + L ++ ++ LKY + M+ W Sbjct: 68 EYAFAYLKFSKG-------GKVQKILHELKYDHNQTIGEMVGNW 104 >gi|121634139|ref|YP_974384.1| hypothetical protein NMC0263 [Neisseria meningitidis FAM18] gi|120865845|emb|CAM09577.1| hypothetical protein NMC0263 [Neisseria meningitidis FAM18] gi|325131587|gb|EGC54294.1| comF/gntX family protein [Neisseria meningitidis M6190] gi|325139158|gb|EGC61704.1| comF/gntX family protein [Neisseria meningitidis ES14902] Length = 241 Score = 37.2 bits (85), Expect = 0.84, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHIQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111 >gi|329944319|ref|ZP_08292578.1| phosphoribosyl transferase domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328531049|gb|EGF57905.1| phosphoribosyl transferase domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 285 Score = 37.2 bits (85), Expect = 0.85, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 26/102 (25%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 P C R LC C ++ + + +++ + D L Sbjct: 33 PVSCAGCGRW---ETTLCPQC-REL--LESEPFTVEHAEAAGDLAIL------------- 73 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMA-------QWMFRV 115 S+ Y +V K R DL +MA +W R Sbjct: 74 SLATYTGPMRTMVLGWKNGSREDLTEVMAHSGRRLGRWWARA 115 >gi|59802047|ref|YP_208759.1| hypothetical protein NGO1726 [Neisseria gonorrhoeae FA 1090] gi|59718942|gb|AAW90347.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] Length = 241 Score = 37.2 bits (85), Expect = 0.86, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 3/90 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI-HFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79 C + + +C C + + F T + ++ +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLASFRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + Y ++R LK+ +A +A Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107 >gi|330979909|gb|EGH78209.1| phosphoribosyltransferase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 244 Score = 36.8 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ TQ+ + Sbjct: 21 CLLCDERSEVPTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDGLITRFKH 95 >gi|305676148|ref|YP_003867820.1| putative component of the DNA transport apparatus [Bacillus subtilis subsp. spizizenii str. W23] gi|305414392|gb|ADM39511.1| putative component of the DNA transport apparatus [Bacillus subtilis subsp. spizizenii str. W23] Length = 240 Score = 36.8 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 29/99 (29%), Gaps = 18/99 (18%) Query: 19 IYPSICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDP 66 IY IC + + +C C SK+ IT L ++ Sbjct: 9 IYKLICLLCDSPFSQAITWRALFLLKPEEKVCHTCRSKLKKITGHICTLCGRPQSVHAVC 68 Query: 67 LKSMQ------KDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 L L Q RSV Y D+ + K+ Sbjct: 69 KDCEAWKSRVSDSLLLRQNRSVYTYNDVMKETLSRFKFR 107 >gi|209519809|ref|ZP_03268594.1| putative competence protein F-related protein [Burkholderia sp. H160] gi|209499752|gb|EDZ99822.1| putative competence protein F-related protein [Burkholderia sp. H160] Length = 233 Score = 36.8 bits (84), Expect = 0.87, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 9/105 (8%) Query: 21 PSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKNNKDNIDKDPLKSMQKD 73 P++C + + +C C W++ + A + + + Sbjct: 6 PNLCALCGNM--SHKTVCDGCDAAYWNEDRLRCTVCAVPLPASRRVARVQYCCADCVSEP 63 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 ++ Y L LK+ R LA AQ + R+ E Sbjct: 64 PSFDASFALADYRAPLDTLAVGLKFRARLVLARDFAQRLARLAED 108 >gi|300789805|ref|YP_003770096.1| hypothetical protein AMED_7990 [Amycolatopsis mediterranei U32] gi|299799319|gb|ADJ49694.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length = 334 Score = 36.8 bits (84), Expect = 0.88, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 20/109 (18%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 ++ L + PS C C W + Sbjct: 19 VLKRLLDLLIPSRCAACGARGEPCCARCEDVWGAARELVRAPTAG--------------- 63 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 L ++ ++ Y + L+ K R DLA + + + + + Sbjct: 64 -----LVRVFALAGYRGVGRKLLIAYKERGRRDLAPSLGRAVAEAVAVL 107 >gi|216264504|ref|ZP_03436496.1| conserved hypothetical protein [Borrelia burgdorferi 156a] gi|223889407|ref|ZP_03623993.1| conserved hypothetical protein [Borrelia burgdorferi 64b] gi|224532411|ref|ZP_03673041.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23] gi|215980977|gb|EEC21784.1| conserved hypothetical protein [Borrelia burgdorferi 156a] gi|223885093|gb|EEF56197.1| conserved hypothetical protein [Borrelia burgdorferi 64b] gi|224512718|gb|EEF83089.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23] Length = 118 Score = 36.8 bits (84), Expect = 0.88, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 8/89 (8%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77 C + L +C +C +K+ I + P Sbjct: 10 CEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69 Query: 78 QI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104 + R+ + + VRL + D+ Sbjct: 70 RKERARMISDRAASKTFVRLFHFGINIDI 98 >gi|218887941|ref|YP_002437262.1| phosphoribosyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758895|gb|ACL09794.1| phosphoribosyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 274 Score = 36.8 bits (84), Expect = 0.89, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 12/97 (12%) Query: 24 CPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 CP + + R +C C H L D + P R Sbjct: 62 CPACTVALAPRRGGICPRC--------GAPHALSTLP---DSPCGHCLTSPPPWAAFRMH 110 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 LY LV K+ + A ++ + + Sbjct: 111 GLYEGTLRHLVLRAKFAEDHAAARVLGGLLATACHGL 147 >gi|322830956|ref|YP_004210983.1| phosphoribosyltransferase [Rahnella sp. Y9602] gi|321166157|gb|ADW71856.1| phosphoribosyltransferase [Rahnella sp. Y9602] Length = 229 Score = 36.8 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 4/77 (5%) Query: 36 CLCGHCWSKIHFITATEHILKNN--KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLV 93 +C C + A L+ D + + K P + + Y LV Sbjct: 21 GICSLCMKHLP--VAPPCCLRCGLPSSGGHADCGRCLLKPPPWDAMIFASPYEMPVSGLV 78 Query: 94 RLLKYHDRTDLAIMMAQ 110 K+ + +L +A+ Sbjct: 79 LRFKFSRQPELDTTLAR 95 >gi|310765660|gb|ADP10610.1| gluconate periplasmic binding protein [Erwinia sp. Ejp617] Length = 215 Score = 36.8 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 2/65 (3%) Query: 35 FCLCGHCWSKIHFITATEHILKNNK-DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLV 93 LC C ++ + + + +++ P ++ +V+ + LV Sbjct: 8 HGLCSVCLRQL-LVQPACCPRCGLPAGGSRHECGRCLRRPPPWQRLIAVSAWHPPLSQLV 66 Query: 94 RLLKY 98 LK+ Sbjct: 67 NRLKF 71 >gi|239999818|ref|ZP_04719742.1| hypothetical protein Ngon3_10123 [Neisseria gonorrhoeae 35/02] gi|254494599|ref|ZP_05107770.1| competence protein [Neisseria gonorrhoeae 1291] gi|268595627|ref|ZP_06129794.1| competence protein [Neisseria gonorrhoeae 35/02] gi|293398086|ref|ZP_06642291.1| hypothetical protein NGNG_01641 [Neisseria gonorrhoeae F62] gi|226513639|gb|EEH62984.1| competence protein [Neisseria gonorrhoeae 1291] gi|268549016|gb|EEZ44434.1| competence protein [Neisseria gonorrhoeae 35/02] gi|291611349|gb|EFF40419.1| hypothetical protein NGNG_01641 [Neisseria gonorrhoeae F62] Length = 241 Score = 36.8 bits (84), Expect = 0.90, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 3/90 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI-HFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79 C + + +C C + + F T + ++ +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLASFRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + Y ++R LK+ +A +A Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107 >gi|307251278|ref|ZP_07533198.1| hypothetical protein appser4_20380 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306856676|gb|EFM88812.1| hypothetical protein appser4_20380 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 225 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 10/80 (12%), Positives = 23/80 (28%), Gaps = 6/80 (7%) Query: 23 ICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79 C R+ +C C K+ T + +D + ++ + ++ Sbjct: 7 RCIECHKRLQIAEHGICSRCLKKLDI---TPYCSCCGSLLVDNHRYCGECLRNEPKWHRM 63 Query: 80 RSVTLYCDMSCVLVRLLKYH 99 V Y + K+ Sbjct: 64 VRVCRYSAPMTDWIHRFKFQ 83 >gi|253690286|ref|YP_003019476.1| gluconate periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756864|gb|ACT14940.1| gluconate periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 233 Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 31/75 (41%) Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95 +C +C + + A + + + +Q P + ++ Y L++ Sbjct: 21 GICSYCQRHLPRLPACCPRCGLPSGDTTRQCGRCLQNPPPWQSMTFISDYAPPLNTLLKH 80 Query: 96 LKYHDRTDLAIMMAQ 110 K+H +T+LA + A+ Sbjct: 81 FKFHGKTELAAVFAR 95 >gi|254671567|emb|CBA09213.1| competence protein F [Neisseria meningitidis alpha153] Length = 241 Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 25/94 (26%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + ++ +C C + A L +K ++ Sbjct: 18 RCVLCHGSSSVSDGICAGCRDDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111 >gi|239905752|ref|YP_002952491.1| competence protein F [Desulfovibrio magneticus RS-1] gi|239795616|dbj|BAH74605.1| competence protein F [Desulfovibrio magneticus RS-1] Length = 249 Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 23/90 (25%), Gaps = 12/90 (13%) Query: 22 SICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 +CP R+ C C + + L Q P Sbjct: 36 PLCPACRDRLAPRLGGFCPRC-----------GAMGQDAAATPGLCLDCRQGSRPWDGFA 84 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 Y + LV K+H R ++A Sbjct: 85 FHGRYEGLLRELVLGFKFHGRLGQGRLLAG 114 >gi|195941481|ref|ZP_03086863.1| hypothetical protein Bbur8_01181 [Borrelia burgdorferi 80a] gi|221217900|ref|ZP_03589367.1| conserved hypothetical protein [Borrelia burgdorferi 72a] gi|224533377|ref|ZP_03673971.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a] gi|225548847|ref|ZP_03769824.1| conserved hypothetical protein [Borrelia burgdorferi 94a] gi|225549954|ref|ZP_03770915.1| conserved hypothetical protein [Borrelia burgdorferi 118a] gi|221192206|gb|EEE18426.1| conserved hypothetical protein [Borrelia burgdorferi 72a] gi|224513542|gb|EEF83899.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a] gi|225369413|gb|EEG98865.1| conserved hypothetical protein [Borrelia burgdorferi 118a] gi|225370450|gb|EEG99886.1| conserved hypothetical protein [Borrelia burgdorferi 94a] gi|312148227|gb|ADQ30886.1| conserved hypothetical protein [Borrelia burgdorferi JD1] Length = 118 Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 8/89 (8%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77 C + L +C +C +K+ I + P Sbjct: 10 CEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69 Query: 78 QI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104 + R+ + + VRL + D+ Sbjct: 70 RKERARMVSDRAASKTFVRLFHFGINVDI 98 >gi|126731808|ref|ZP_01747612.1| oxidoreductase, short chain dehydrogenase/reductase family protein [Sagittula stellata E-37] gi|126707635|gb|EBA06697.1| oxidoreductase, short chain dehydrogenase/reductase family protein [Sagittula stellata E-37] Length = 412 Score = 36.8 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 17/92 (18%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS- 81 +C + + C CW ++ + + + + I + LP + Sbjct: 47 VCSDCGQATYPQRDRCPACWGELSWKDRPDGAVIEAETTIRSSIDLFFKHHLPWRIGAAR 106 Query: 82 --------VTLYCDMSCVLVRLLKYHDRTDLA 105 V L+ D+ DR +A Sbjct: 107 LDAGPMATVHLHRDVGR--------GDRVRIA 130 >gi|303327518|ref|ZP_07357959.1| competence protein F [Desulfovibrio sp. 3_1_syn3] gi|302862458|gb|EFL85391.1| competence protein F [Desulfovibrio sp. 3_1_syn3] Length = 181 Score = 36.8 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 2/100 (2%) Query: 22 SICPIYSRI-INLRFCLCGHC-WSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 +CP + + C C + T + +++ + +Q+D P + Sbjct: 48 PLCPECCLLFLPYNGPRCPRCGLPPVEIGTGKQTADASSRPAPLSRCGQCLQEDPPWDGL 107 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 LY + LK+ LA ++ + + Sbjct: 108 ACYGLYEGALRDALLRLKFGGELSLAPLLGACLLEASRCL 147 >gi|229524697|ref|ZP_04414102.1| hypothetical protein VCA_002298 [Vibrio cholerae bv. albensis VL426] gi|229338278|gb|EEO03295.1| hypothetical protein VCA_002298 [Vibrio cholerae bv. albensis VL426] Length = 286 Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + + + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVEQCGQCLCQAPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ V Y V LKY Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144 >gi|198273952|ref|ZP_03206484.1| hypothetical protein BACPLE_00088 [Bacteroides plebeius DSM 17135] gi|198273030|gb|EDY97299.1| hypothetical protein BACPLE_00088 [Bacteroides plebeius DSM 17135] Length = 229 Score = 36.8 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 38/108 (35%), Gaps = 13/108 (12%) Query: 11 IIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69 I+ ++ ++P +C R + LC C S++ H N + + + Sbjct: 3 ILTDIRDFLFPRLCMACGRKLQVSEQALCCDCLSQL------PHTHLGNTPGNEMEKIFW 56 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVR---LLKYHDRTDLAIMMAQWMFR 114 + P+ + S Y + +KY+ R + M + + Sbjct: 57 GR--FPIQRA-SALFYYARGGKVAHILAGMKYYGRQKVCRQMGEMLAH 101 >gi|75907199|ref|YP_321495.1| hypothetical protein Ava_0976 [Anabaena variabilis ATCC 29413] gi|75700924|gb|ABA20600.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 229 Score = 36.8 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 18/106 (16%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 T L S CP+ R + LC +C ++ + D + K P Sbjct: 3 TWNQRFQGLLDLFLQSNCPLCQRPTSTE--LCPNCTKQLQ------KCRHTHPDGLWKQP 54 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + + LY + L+KY ++ +A + QW+ Sbjct: 55 I------PVFSWG----LYGGTLKRAIALMKYDNQPQIARPLGQWL 90 >gi|298345533|ref|YP_003718220.1| hypothetical protein HMPREF0573_10407 [Mobiluncus curtisii ATCC 43063] gi|298235594|gb|ADI66726.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063] Length = 259 Score = 36.8 bits (84), Expect = 1.00, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 16/92 (17%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 EL + P+ C +C C +++ L+ ++D ++ Sbjct: 12 GELGKVLLPTECVGCGAW---DEEICDTCLAQM---LGCPFPLQISED------DDNVTD 59 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 ++ Y +V K+ R DL Sbjct: 60 VPVF----AIAKYDGPMRRVVLTGKHDKRRDL 87 >gi|17230418|ref|NP_486966.1| hypothetical protein alr2926 [Nostoc sp. PCC 7120] gi|17132020|dbj|BAB74625.1| alr2926 [Nostoc sp. PCC 7120] Length = 229 Score = 36.8 bits (84), Expect = 1.00, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 32/101 (31%), Gaps = 18/101 (17%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 L S CP+ R + LC +C ++ K + Q Sbjct: 8 FQGLLDLFLQSNCPLCQRPTSTE--LCPNCTRQLQ------------KCHHKHPHALWKQ 53 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + LY + L+KY ++ +A + QW+ Sbjct: 54 PIPVFSWG----LYGGTLKRAIALMKYDNQPQIARPLGQWL 90 >gi|332520156|ref|ZP_08396620.1| phosphoribosyltransferase [Lacinutrix algicola 5H-3-7-4] gi|332044715|gb|EGI80909.1| phosphoribosyltransferase [Lacinutrix algicola 5H-3-7-4] Length = 225 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 11/105 (10%) Query: 11 IIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNN--KDNIDKDPL 67 +I L + +P +C ++ + +C C + +T + K + L Sbjct: 1 MINSLINLFFPKVCSACKLLLNDNEKYICTTCRHNLP-VTNYHKTNDDFVKKVFYGRAKL 59 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 + L + + L+ LKY ++ + + +W+ Sbjct: 60 EQATALLRFEK-------KGIVQQLLHDLKYREQQQIGTFLGKWL 97 >gi|153802206|ref|ZP_01956792.1| ComF family protein [Vibrio cholerae MZO-3] gi|124122280|gb|EAY41023.1| ComF family protein [Vibrio cholerae MZO-3] Length = 286 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 9/83 (10%) Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76 C + N F +C C W + D + + + P Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121 Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99 ++ + Y V LKY Sbjct: 122 RKLMCIGGYRFPLSDAVHQLKYQ 144 >gi|330447158|ref|ZP_08310808.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491349|dbj|GAA05305.1| gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 235 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 4/89 (4%) Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQIRS 81 C + + C HC + HF ++ + + + + P ++ Sbjct: 22 CSLCQLPLEPNDDYWCQHCLN--HFPSSPYCHRCGTSTFQNVEYCGLCLAEPPPWHRLYR 79 Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + Y L+ K+ + LA +A+ Sbjct: 80 LGEYQPPLQQLISQYKFGKKFWLAKPLAR 108 >gi|15676193|ref|NP_273325.1| competence protein [Neisseria meningitidis MC58] gi|7225493|gb|AAF40723.1| competence protein [Neisseria meningitidis MC58] gi|316985199|gb|EFV64151.1| competence protein [Neisseria meningitidis H44/76] gi|325141105|gb|EGC63608.1| comF/gntX family protein [Neisseria meningitidis CU385] gi|325199472|gb|ADY94927.1| comF/gntX family protein [Neisseria meningitidis H44/76] Length = 241 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHIQGGSVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111 >gi|330967246|gb|EGH67506.1| competence protein ComF [Pseudomonas syringae pv. actinidiae str. M302091] Length = 244 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 23/75 (30%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ Q+ + Sbjct: 21 CLLCDERSEVPAPICVPCEAELPWLGNQCEHCALPLPVFGLSCGQCSKRPPAFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPIDSLITRFKH 95 >gi|308175277|ref|YP_003921982.1| competence protein FC [Bacillus amyloliquefaciens DSM 7] gi|307608141|emb|CBI44512.1| competence protein FC [Bacillus amyloliquefaciens DSM 7] gi|328555250|gb|AEB25742.1| competence protein FC [Bacillus amyloliquefaciens TA208] Length = 225 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 6/69 (8%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLP------LTQIRSVTLYCDMSC 90 +C C ++ I L +K M ++ L Q RSV LY D Sbjct: 24 VCSACSNQFEKIEGPVCSLCGRPQQSNKKCADCMARESKTEQRFLLRQNRSVFLYNDAMK 83 Query: 91 VLVRLLKYH 99 + K+ Sbjct: 84 DSLARFKFR 92 >gi|311111734|ref|YP_003982956.1| competence protein F [Rothia dentocariosa ATCC 17931] gi|310943228|gb|ADP39522.1| competence protein F [Rothia dentocariosa ATCC 17931] Length = 274 Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 22/121 (18%) Query: 6 QTVKSIIIELFHCIYPSICPIYS-------RIINLRFCLCGHCWSKIHFITATEHILKNN 58 + K + ++ +P+ C R LC C + + T+ H Sbjct: 7 KRGKKALYAVWELFFPATCVGCGVGGTALLDAAGTRRALCTRCETSLRKQTSAVHT---- 62 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +Q +P + +Y ++ +K RTD +A+ + R + Sbjct: 63 ---------PVLQHPVP--GAVAAGIYEKTLAHVILSMKNAGRTDAVPELARALGRAVAT 111 Query: 119 I 119 I Sbjct: 112 I 112 >gi|197286754|ref|YP_002152626.1| gluconate metabolism protein [Proteus mirabilis HI4320] gi|194684241|emb|CAR45762.1| putative gluconate metabolism protein [Proteus mirabilis HI4320] Length = 230 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 6/97 (6%) Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + + + +C C + + + ++ Q+ +V Sbjct: 9 CWLCRQPLRYGNHSICSSCIRHLPQQNNRCPGCLYPSTHSMILCGRCLRSPPRWKQMLTV 68 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMA-----QWMFR 114 T Y L+ L KYH R +A+ +A +W+ Sbjct: 69 TDYRPPLNKLLHLYKYHPRPQIALCLAKLFLLRWLAH 105 >gi|88705178|ref|ZP_01102889.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88700268|gb|EAQ97376.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 239 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 1/93 (1%) Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 +K + +L + P C + + + +C C + + D + Sbjct: 4 SVIKGFVRDLLDYLAPQRCIYCDQPSHRQERICEVC-EDALILNDSACPRCALPDMGARL 62 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 +++D L + + +Y + KY Sbjct: 63 CPGCLERDPALKSVTAAFVYDAAIAYFIHRWKY 95 >gi|315656135|ref|ZP_07909026.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493137|gb|EFU82737.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 259 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 16/92 (17%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 EL + P+ C +C C +++ L+ ++D ++ Sbjct: 12 GELGKVLLPTECVGCGAW---DEEICDTCLAQM---LGCPFPLQISED------DDNVTD 59 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 ++ Y +V K+ R DL Sbjct: 60 VPVF----AIAKYDGPMRRVVLTGKHDKRRDL 87 >gi|28867723|ref|NP_790342.1| competence protein ComF [Pseudomonas syringae pv. tomato str. DC3000] gi|28850958|gb|AAO54037.1| competence protein ComF, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|331015040|gb|EGH95096.1| competence protein ComF, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 244 Score = 36.4 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 23/76 (30%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + + +C C +++ ++ + ++ Q+ + Sbjct: 20 TCLLCDERSEVPAPICVPCEAELPWLGEQCEYCALPLPVFGLSCGQCSKRPPAFAQVVAP 79 Query: 83 TLYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 80 WLYEFPIDSLITRFKH 95 >gi|213967736|ref|ZP_03395883.1| competence protein ComF [Pseudomonas syringae pv. tomato T1] gi|301382373|ref|ZP_07230791.1| competence protein ComF, putative [Pseudomonas syringae pv. tomato Max13] gi|302062356|ref|ZP_07253897.1| competence protein ComF, putative [Pseudomonas syringae pv. tomato K40] gi|302130674|ref|ZP_07256664.1| competence protein ComF, putative [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927512|gb|EEB61060.1| competence protein ComF [Pseudomonas syringae pv. tomato T1] Length = 244 Score = 36.4 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 24/76 (31%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + + +C C +++ ++ + ++ Q+ + Sbjct: 20 ICLLCDERSEVPAPICVPCEAELPWLGDQCEYCALPLPVFGLSCGQCSKRPPAFAQVVAP 79 Query: 83 TLYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 80 WLYEFPIDSLITRFKH 95 >gi|14590587|ref|NP_142655.1| hypothetical protein PH0709 [Pyrococcus horikoshii OT3] gi|11387255|sp|O58440|VAPC6_PYRHO RecName: Full=Putative toxin VapC6 gi|3257117|dbj|BAA29800.1| 161aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 161 Score = 36.4 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 4/49 (8%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINL--RFCLCGHCWSKIHFITA 50 +T+K I ++ Y +C R + +C C SK+ I Sbjct: 113 RFRTLKRGIKKVIKWRY--VCIGCGRKFSTLPPGGVCPDCGSKVKLIPR 159 >gi|223939761|ref|ZP_03631632.1| serine/threonine protein kinase [bacterium Ellin514] gi|223891537|gb|EEF58027.1| serine/threonine protein kinase [bacterium Ellin514] Length = 725 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 2/69 (2%) Query: 23 ICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 ICP + + + LC C K F T + K ++ + K P +I Sbjct: 6 ICPTCGKAVVPDAPQGLCPECLIKSGFETKAGNEPAGGKSAFVPPTVEQIAKLFPQFEIN 65 Query: 81 SVTLYCDMS 89 + + M Sbjct: 66 ELLGHGGMG 74 >gi|269103900|ref|ZP_06156597.1| hypothetical ComF-related protein [Photobacterium damselae subsp. damselae CIP 102761] gi|268163798|gb|EEZ42294.1| hypothetical ComF-related protein [Photobacterium damselae subsp. damselae CIP 102761] Length = 249 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 26/90 (28%), Gaps = 13/90 (14%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C R I C C + + + + + P + Sbjct: 35 CDNCRRHIEQLH-YCQRCGATLT------------QSASTLTCGRCLVSPPPWHHFYRLG 81 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 L+ +V K+ + LA +AQW+ Sbjct: 82 LHQFPLKQVVHPFKFQRQFYLAAPLAQWLA 111 >gi|254805688|ref|YP_003083909.1| competence protein [Neisseria meningitidis alpha14] gi|254669229|emb|CBA08067.1| competence protein [Neisseria meningitidis alpha14] Length = 241 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHIQGGAVCGICQRKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++ LK+ + +A M Sbjct: 78 WASLHYEPPVSNIIHALKHLADLSMVQPLADLMM 111 >gi|330956967|gb|EGH57227.1| competence protein ComF [Pseudomonas syringae pv. maculicola str. ES4326] Length = 244 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 25/76 (32%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + + +C C +++ ++ + ++ ++ Q+ + Sbjct: 20 TCLLCDERSEVPAPVCVPCEAELPWLGDQCERCALPMPIAGLECVQCSKRSPAFAQVIAP 79 Query: 83 TLYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 80 WLYDFPVDSLITRFKH 95 >gi|260437436|ref|ZP_05791252.1| putative competence protein [Butyrivibrio crossotus DSM 2876] gi|292810068|gb|EFF69273.1| putative competence protein [Butyrivibrio crossotus DSM 2876] Length = 224 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%) Query: 37 LCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVR 94 +C C SKI +I K +D+ + + K + + Y + Sbjct: 17 ICPGCRSKITYIKQPVCYRCGKQLEDDEQEYCHDCVVKQHNFKRGVAAFSYSQGMKKSMY 76 Query: 95 LLKYHDRTDLAIMMA 109 KY++R + A A Sbjct: 77 AFKYNNRREYAKYYA 91 >gi|294786783|ref|ZP_06752037.1| conserved hypothetical protein [Parascardovia denticolens F0305] gi|294485616|gb|EFG33250.1| conserved hypothetical protein [Parascardovia denticolens F0305] Length = 230 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 18/96 (18%) Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIH-FITATEHILKNNKDNIDKDPLKSMQKDLPL 76 ++P CP R LC C + F++ + + P Sbjct: 4 LLFPRCCPGCGR---ADRILCPACSAAFSLFLSRNLYDHSLSGG--------------PS 46 Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 Q+ S +LY + + K H +L ++M Sbjct: 47 LQVHSCSLYQGLVRQTILAWKDHGDVELDGPFGRFM 82 >gi|134102878|ref|YP_001108539.1| hypothetical protein SACE_6444 [Saccharopolyspora erythraea NRRL 2338] gi|133915501|emb|CAM05614.1| hypothetical protein SACE_6444 [Saccharopolyspora erythraea NRRL 2338] Length = 297 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 28/116 (24%), Gaps = 20/116 (17%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 + ++ + L ++P C R LCG C + Sbjct: 1 MPTRLRDALSSLVDLLFPLHCAGCRR---RGASLCGECARDL-------------GGLHR 44 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + L Y + V K + LA + + L I Sbjct: 45 QRRLLLPPAPPAYALG----GYRGSARRAVLAYKEAGQRHLAAPFGERLATGLRGI 96 >gi|330874793|gb|EGH08942.1| competence protein ComF [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 244 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 23/75 (30%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ Q+ + Sbjct: 21 CLLCDERSEVPAPICVPCEAELPWLGNQCEHCALPLPVFGLSCGQCSKRPPAFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPIDSLITRFKH 95 >gi|312131270|ref|YP_003998610.1| phosphoribosyltransferase [Leadbetterella byssophila DSM 17132] gi|311907816|gb|ADQ18257.1| phosphoribosyltransferase [Leadbetterella byssophila DSM 17132] Length = 226 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 17/106 (16%) Query: 14 ELFHCIYPSICPIY-SRIINLRFCLCGHC-WSKIHFITATEHILKNN---KDNIDKDPLK 68 L +P C +I +C C WS L+ + K + Sbjct: 11 SLLDFFFPRFCVACEKQITEWESAICLPCFWS-----MPRYSALQMDHLRSKFWGKVKIH 65 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + L + +V ++ +KY ++ +LAI + Q M R Sbjct: 66 GVFAYLKFQKGNAV-------QDVLHAIKYKNQRELAIWLGQSMGR 104 >gi|227112202|ref|ZP_03825858.1| gluconate periplasmic binding protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 233 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%) Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95 +C +C + + + + +Q P I ++ Y L++ Sbjct: 21 GICSYCQRHLPRLPLCCPRCGLPSTDTTHQCGRCLQNPPPWQSITFISDYVPPFNTLLKH 80 Query: 96 LKYHDRTDLAIMMAQ 110 LK+H +T+LA ++A+ Sbjct: 81 LKFHGKTELAAVLAR 95 >gi|224532241|ref|ZP_03672873.1| conserved hypothetical protein [Borrelia valaisiana VS116] gi|224511706|gb|EEF82112.1| conserved hypothetical protein [Borrelia valaisiana VS116] Length = 118 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 7/82 (8%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77 C + L +C +C +K+ I + P Sbjct: 10 CEQCGEKVGLNRSICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69 Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98 + R + + + L + Sbjct: 70 RKERIRMVSGGVVSRVFVRLFH 91 >gi|5921548|emb|CAB56477.1| competence protein ComF [Pseudomonas stutzeri] Length = 235 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/91 (10%), Positives = 28/91 (30%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + LC C +++ ++ + I + ++ + Sbjct: 12 CQLCDERCEPGQSLCPGCETELPWLGSQCSICALPLPVAGAVCGECLKHPPAFDHVAVPW 71 Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 + L+ K+ R ++A+ + R Sbjct: 72 RFAFPVDSLITRFKHQSRWPFGRLLAEHLAR 102 >gi|29348209|ref|NP_811712.1| putative amidophosphoribosyl-transferase [Bacteroides thetaiotaomicron VPI-5482] gi|29340112|gb|AAO77906.1| putative amidophosphoribosyl-transferase [Bacteroides thetaiotaomicron VPI-5482] Length = 235 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + +P C + + C+C C + D K Sbjct: 11 LYSFLSLWFPRCCVVCGGSLAKGEECICTMC--------NINLPRTDYHLRKDNPVEKLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 PL + S Y S ++ LKY + ++ +M ++M Sbjct: 63 WGKFPLERATSFFFYRKGSDFRQVLHQLKYGGQKEIGAIMGRYMA 107 >gi|256833043|ref|YP_003161770.1| amidophosphoribosyltransferase-like protein [Jonesia denitrificans DSM 20603] gi|256686574|gb|ACV09467.1| amidophosphoribosyltransferase-like protein [Jonesia denitrificans DSM 20603] Length = 255 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 30/101 (29%), Gaps = 11/101 (10%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 + I EL + P CP + LC C +H + Sbjct: 5 TSRLTHRIGAELGRLLIPQYCPGCGAL---DTSLCPICTRTLH--------QPPTRVEHH 53 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 L + P+ + +++ Y + K H R DL Sbjct: 54 IPRLARIDNHPPILPVWALSPYDGPVRHIFTAWKDHGRGDL 94 >gi|37524220|ref|NP_927564.1| gluconate periplasmic binding protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783643|emb|CAE12494.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 227 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 29/77 (37%) Query: 34 RFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLV 93 +C C ++ + + + ++K + ++T YC L+ Sbjct: 19 HHGVCSFCNKRLKRLANMCPCCALPSELPSLPCGRCLKKPPLWENMIAITDYCPPLSGLI 78 Query: 94 RLLKYHDRTDLAIMMAQ 110 R KYH LA ++A+ Sbjct: 79 RRYKYHRTPQLASVLAR 95 >gi|221065311|ref|ZP_03541416.1| ComF family protein [Comamonas testosteroni KF-1] gi|220710334|gb|EED65702.1| ComF family protein [Comamonas testosteroni KF-1] Length = 254 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 2/93 (2%) Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 PS C + R R +C C ++ H ++ +++ L + Sbjct: 32 PSQCAVCGRWPGPR--ICHDCQARWARQKHRCHSCALPLPSLVSLCGSCLKQPPRLKRCT 89 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 SV Y L+ K+ LA + + M Sbjct: 90 SVLDYAYPWQDLITRYKFQADLGLARSLGRLMA 122 >gi|254429751|ref|ZP_05043458.1| hypothetical protein ADG881_2981 [Alcanivorax sp. DG881] gi|196195920|gb|EDX90879.1| hypothetical protein ADG881_2981 [Alcanivorax sp. DG881] Length = 248 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 12/98 (12%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHIL--------KNNKDNIDKDP 66 LF+ I PS C + + + LC C + +T D++ Sbjct: 17 LFNHINPSPCTLCGQ--SESGALCVDCLHLLARLTVPVCRCGLPHGNEQPVEADSVPPLC 74 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 + +++ P + ++ Y L+ K+ R DL Sbjct: 75 GRCIRQPPPFSASQAPLQYTFPIDALITRYKH--RADL 110 >gi|253569488|ref|ZP_04846898.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251841507|gb|EES69588.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 235 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 11/105 (10%) Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 + +P C + + C+C C + D K Sbjct: 11 LYSFLSLWFPRCCVVCGGSLAKGEECICTMC--------NINLPRTDYHLRKDNPVEKLF 62 Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 PL + S Y S ++ LKY + ++ +M ++M Sbjct: 63 WGKFPLERATSFFFYRKGSDFRQVLHQLKYGGQKEIGAIMGRYMA 107 >gi|326792660|ref|YP_004310481.1| phosphoribosyltransferase [Clostridium lentocellum DSM 5427] gi|326543424|gb|ADZ85283.1| phosphoribosyltransferase [Clostridium lentocellum DSM 5427] Length = 238 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 6/93 (6%) Query: 11 IIIELFHCIYPSICPIYSRIINLRF--CLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 + L IYP C I ++++ LC C+S H + I+ + Sbjct: 4 FLGRLKKLIYPDKCTICRKLLSAETKEVLCDRCYS--HLLKENLCNRCGRPYKIEYEGCL 61 Query: 69 SMQKDLPLTQIRSVTL--YCDMSCVLVRLLKYH 99 +++ R++ L YCD V KY Sbjct: 62 CCKEEEDSMVKRTIGLFPYCDHYRKAVLRWKYR 94 >gi|219684373|ref|ZP_03539317.1| conserved hypothetical protein [Borrelia garinii PBr] gi|219685698|ref|ZP_03540511.1| conserved hypothetical protein [Borrelia garinii Far04] gi|219672362|gb|EED29415.1| conserved hypothetical protein [Borrelia garinii PBr] gi|219672748|gb|EED29774.1| conserved hypothetical protein [Borrelia garinii Far04] Length = 118 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 19/82 (23%), Gaps = 7/82 (8%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77 C + L +C +C +K+ I + P Sbjct: 10 CEQCGEKVGLNRSICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69 Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98 + R + + L + Sbjct: 70 RKERVRIAGDGVVSKVFVRLFH 91 >gi|167579698|ref|ZP_02372572.1| ComF family protein [Burkholderia thailandensis TXDOH] Length = 119 Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 7/111 (6%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55 + A V ++ P+ C + + +C C W++ L Sbjct: 11 IRAAAARVGIVLARFSAAALPNRCALCGNL--SHRTICDCCDDAYWNEARLRCPRCALPL 68 Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAI 106 + + + ++ Y L LK+ R L Sbjct: 69 PGARGAMRYRCGACARMPPRFDATLALADYRAPLDSLALDLKFRARLALGR 119 >gi|299140246|ref|ZP_07033412.1| phosphoribosyltransferase [Acidobacterium sp. MP5ACTX8] gi|298597785|gb|EFI53957.1| phosphoribosyltransferase [Acidobacterium sp. MP5ACTX8] Length = 359 Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 36/110 (32%), Gaps = 12/110 (10%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINL--RFCLCGHCWSKIHFITATEHILKNN 58 + + + + +L + I+PS C + + + +C C + + T + Sbjct: 69 LRSSRTAMGGAVADLVNVIFPSDCRVCGAPMVALSKAQVCEACVACVGAQTDVLCSRCGD 128 Query: 59 KDNIDK----------DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98 ++ + + + +Y D ++ LLK+ Sbjct: 129 ALGMESARFAAGMGMTECTMCRLAPPEFAKAVAFAVYDDEVREMLHLLKF 178 >gi|149277499|ref|ZP_01883640.1| putative amidophosphoribosyl-transferase [Pedobacter sp. BAL39] gi|149231732|gb|EDM37110.1| putative amidophosphoribosyl-transferase [Pedobacter sp. BAL39] Length = 232 Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 7/102 (6%) Query: 9 KSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67 + I L ++P+IC + + LC C + + H+ +NK N Sbjct: 5 RRWITALVRLLFPNICLACNTELYAGEHLLCSRCRYSLPYTD--HHLFIDNKVNRQLWGR 62 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + R ++ +KYH +T L M+ Sbjct: 63 IPSPNAMAFLHFRK----GGRVQQIMHQIKYHHQTVLGAMLG 100 >gi|290969085|ref|ZP_06560618.1| ComF family protein [Megasphaera genomosp. type_1 str. 28L] gi|290780882|gb|EFD93477.1| ComF family protein [Megasphaera genomosp. type_1 str. 28L] Length = 220 Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 16/83 (19%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHC---WSK---------IHFITATEHI----LKNN 58 L +YP CP + ++ + C C W I F+ A + Sbjct: 9 LNTMLYPPRCPGCNGLLRPQQHWCHACKRKWGDGRRLQRQGNIRFLDAIYCVASYRGPVG 68 Query: 59 KDNIDKDPLKSMQKDLPLTQIRS 81 D +D P ++ S Sbjct: 69 NGLRDLKYGAHSGQDDPWRELLS 91 >gi|120437851|ref|YP_863537.1| phosphoribosyltransferases family protein [Gramella forsetii KT0803] gi|117580001|emb|CAL68470.1| phosphoribosyltransferases family protein [Gramella forsetii KT0803] Length = 226 Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 16/110 (14%) Query: 14 ELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 + + +YPS+C I ++ +C C + IT+ +N + +K + Sbjct: 4 DFINLLYPSVCHICDAELLKNEELICTSCLHDLP-ITSYHLDNENPVIKVFYGRVKIEKA 62 Query: 73 DLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + L+ L+ LKY ++ QW+ +++ Sbjct: 63 --------TALLHFRKKAGVQQLIHDLKYRGYREIGTYFGQWL---GKEL 101 >gi|261856677|ref|YP_003263960.1| phosphoribosyltransferase [Halothiobacillus neapolitanus c2] gi|261837146|gb|ACX96913.1| phosphoribosyltransferase [Halothiobacillus neapolitanus c2] Length = 247 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 24/93 (25%), Gaps = 6/93 (6%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI-----DKDP 66 + L + P+ C + LC C + + + I + Sbjct: 4 LAGLTRFLVPAPCYLCGTASVAVDGLCARCADDLS-TENRAVPHRCPQCAIQVSEAGQRC 62 Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++ + + S L+ KY Sbjct: 63 AACLRHPPSFDFSVAGQDFKTASRFLIHQFKYR 95 >gi|240017422|ref|ZP_04723962.1| hypothetical protein NgonFA_09723 [Neisseria gonorrhoeae FA6140] gi|240113843|ref|ZP_04728333.1| hypothetical protein NgonM_09808 [Neisseria gonorrhoeae MS11] gi|240118801|ref|ZP_04732863.1| hypothetical protein NgonPID_10159 [Neisseria gonorrhoeae PID1] gi|240126552|ref|ZP_04739438.1| hypothetical protein NgonSK_10160 [Neisseria gonorrhoeae SK-92-679] gi|260439662|ref|ZP_05793478.1| hypothetical protein NgonDG_00973 [Neisseria gonorrhoeae DGI2] gi|268599910|ref|ZP_06134077.1| competence protein [Neisseria gonorrhoeae MS11] gi|268604511|ref|ZP_06138678.1| competence protein [Neisseria gonorrhoeae PID1] gi|268685131|ref|ZP_06151993.1| competence protein [Neisseria gonorrhoeae SK-92-679] gi|291042904|ref|ZP_06568645.1| competence protein [Neisseria gonorrhoeae DGI2] gi|268584041|gb|EEZ48717.1| competence protein [Neisseria gonorrhoeae MS11] gi|268588642|gb|EEZ53318.1| competence protein [Neisseria gonorrhoeae PID1] gi|268625415|gb|EEZ57815.1| competence protein [Neisseria gonorrhoeae SK-92-679] gi|291013338|gb|EFE05304.1| competence protein [Neisseria gonorrhoeae DGI2] Length = 241 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 3/90 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCAADLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + Y ++R LK+ +A +A Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107 >gi|254523283|ref|ZP_05135338.1| competence protein F [Stenotrophomonas sp. SKA14] gi|219720874|gb|EED39399.1| competence protein F [Stenotrophomonas sp. SKA14] Length = 256 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 5/114 (4%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-ILKNNKDNI 62 ++ + + L + P C + S + LC C++ + + D Sbjct: 30 VLHSASAASHALLRVLLPLRCLVCSDPGHDGLDLCAACFAALPWSGRACLRCALPLPDTA 89 Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFR 114 ++ P + LY L+ K+H DLA ++AQ M R Sbjct: 90 LIVCGSCREEAPPQAATHASLLYLPPVDQLLVRYKFH--QDLAAGRLLAQLMQR 141 >gi|115374718|ref|ZP_01461995.1| hypothetical protein STIAU_7546 [Stigmatella aurantiaca DW4/3-1] gi|310822708|ref|YP_003955066.1| hypothetical protein STAUR_5469 [Stigmatella aurantiaca DW4/3-1] gi|115368289|gb|EAU67247.1| hypothetical protein STIAU_7546 [Stigmatella aurantiaca DW4/3-1] gi|309395780|gb|ADO73239.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 346 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 20/64 (31%), Gaps = 5/64 (7%) Query: 24 CPIYSRIINLRFCLCGHC--WSKIHFITATEHILKNNKD---NIDKDPLKSMQKDLPLTQ 78 CP + +C C F+++ + D +DP ++ P + Sbjct: 14 CPGCGTQVADGTSICPKCDYIIDASFLSSDPPPGGQDDDEVTGAGQDPRQAAPSPRPARR 73 Query: 79 IRSV 82 + Sbjct: 74 APTA 77 >gi|317494417|ref|ZP_07952831.1| comF family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917667|gb|EFV39012.1| comF family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 227 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 3/94 (3%) Query: 22 SICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQI 79 + C I + + +C C + T + + K + +QK Q+ Sbjct: 6 ARCWICQLPLRVPIQGICSFC-TSASLNTLSVCPRCGLPNGDPKRVCGRCIQKPPYWQQL 64 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 V+ Y L+ LKY + + +A+ M Sbjct: 65 IFVSDYQPPLSQLIHRLKYQGKWQIGSALARLML 98 >gi|254247125|ref|ZP_04940446.1| hypothetical protein BCPG_01904 [Burkholderia cenocepacia PC184] gi|124871901|gb|EAY63617.1| hypothetical protein BCPG_01904 [Burkholderia cenocepacia PC184] Length = 265 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 43/135 (31%), Gaps = 19/135 (14%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEH 53 + ++ V+++ + + + P+ C + + +CG C W++ + A Sbjct: 10 LRVVLSQVRTLAVRVAAVMLPNRCALCGNL--SHAVICGACDAAYWNEAQLRCEVCALPL 67 Query: 54 ILK----------NNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 + P ++ Y L R LK+H R Sbjct: 68 GVGHARSRGGSRSGTARAAAYRCETCRTAPPPFDATLALADYRAPLDGLARGLKFHARLA 127 Query: 104 LAIMMAQWMFRVLEK 118 L A + R+++ Sbjct: 128 LGGEFAARLARLVDD 142 >gi|156936424|ref|YP_001440340.1| hypothetical protein ESA_04325 [Cronobacter sakazakii ATCC BAA-894] gi|156534678|gb|ABU79504.1| hypothetical protein ESA_04325 [Cronobacter sakazakii ATCC BAA-894] Length = 186 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 16/38 (42%) Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102 + +QK ++ + + Y LV LK+ RT Sbjct: 9 PCGRCLQKPPVWQRLLAASDYAPPVSGLVHQLKFQGRT 46 >gi|315655990|ref|ZP_07908888.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315490054|gb|EFU79681.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 259 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 16/92 (17%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 EL + P+ C +C C +++ + ++ Sbjct: 12 GELGKVLLPTECVGCGAW---DEEICDTCLAQM-----LGCPYP----LQISEDDDNVTD 59 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 ++ Y +V K+ R DL Sbjct: 60 VPVF----AIAKYDGPMRRVVLTGKHDKRRDL 87 >gi|285017173|ref|YP_003374884.1| amidophosphoribosyltransferase [Xanthomonas albilineans GPE PC73] gi|283472391|emb|CBA14896.1| putative competence protein (amidophosphoribosyltransferases) [Xanthomonas albilineans] Length = 243 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 2/99 (2%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKD 60 AI V L + P C + + LC C + + L Sbjct: 8 AIANRVDGCWRWLQRRLLPERCLVCTEPGAPGLDLCPACCDALPWNAHACRHCALPLPGL 67 Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + D+ + PL + S +Y L+R K+H Sbjct: 68 DADQLCGACQRCPPPLHLVVSACVYAAPVDGLLRRFKFH 106 >gi|221195723|ref|ZP_03568777.1| amidophosphoribosyltransferase family protein [Atopobium rimae ATCC 49626] gi|221184489|gb|EEE16882.1| amidophosphoribosyltransferase family protein [Atopobium rimae ATCC 49626] Length = 275 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 10/110 (9%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 + ++ + C L LC C SK+ +I + + + Sbjct: 40 VSELLWQTRCVACDMPGEL---LCKECISKLPWIEQRWACPNCGAPFGSLVCSECITRKE 96 Query: 75 P---LTQIRS---VTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 P RS + +V LK LA ++A + LE+ Sbjct: 97 PHVVWES-RSTVCAMGFKGPPARIVTNLKDAHELRLAPVVAAAILTALEE 145 >gi|104161989|emb|CAJ75698.1| predicted amidophosphoribosyltransferases [uncultured Thermotogales bacterium] Length = 212 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 18/100 (18%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 ++ + P+ C + R I+ LC C + I P+ + Sbjct: 4 MLKSVISYFLPNYCLVCEREIDPNDYLCKDCLTSIR------------------GPIMAP 45 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + L + S Y L+R K+ DR +A + A+ Sbjct: 46 VELLNIDSAHSYWKYESPMKELIRAYKFGDRPGVARLFAK 85 >gi|325205353|gb|ADZ00806.1| comF/gntX family protein [Neisseria meningitidis M04-240196] Length = 241 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI-HFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79 C + + +C C + + F T + ++ +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLASFRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++R LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMVQPLADLMM 111 >gi|240949768|ref|ZP_04754100.1| competence protein F [Actinobacillus minor NM305] gi|240295800|gb|EER46487.1| competence protein F [Actinobacillus minor NM305] Length = 229 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 24/82 (29%), Gaps = 6/82 (7%) Query: 23 ICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNI--DKDPLKSMQKDLPLTQI 79 C R ++ C C + IT + + + ++ + +I Sbjct: 7 RCFHCDRPLMIASHGFCSQCIKE---ITISPYCGHCGATLAENSLSCGECLRNEPKWQRI 63 Query: 80 RSVTLYCDMSCVLVRLLKYHDR 101 + LY ++ K+ Sbjct: 64 VQIALYKPPLADWIQRFKFQQH 85 >gi|302342707|ref|YP_003807236.1| phosphoribosyltransferase [Desulfarculus baarsii DSM 2075] gi|301639320|gb|ADK84642.1| phosphoribosyltransferase [Desulfarculus baarsii DSM 2075] Length = 225 Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 2/78 (2%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKI-HFITATEHILKNNKDNI 62 + ++ ++ L +P+ CP R + LC C +++ + + + + + Sbjct: 1 MPPSLAALGRGLLELAFPARCPACGRPAHG-GGLCAACLAQVEPTVEPSLEPIDSLSFAV 59 Query: 63 DKDPLKSMQKDLPLTQIR 80 K + Q R Sbjct: 60 AKHAGPAAQCVRAFKYRR 77 >gi|295097022|emb|CBK86112.1| Predicted amidophosphoribosyltransferases [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 210 Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 1/67 (1%) Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95 +C C + ++ + + ++K P + + +V Y LV Sbjct: 5 GVCSVCTRALGYLKGCPQCGLP-AVSQTLPCGRCLKKAPPWSALVAVDDYVLPLSRLVHQ 63 Query: 96 LKYHDRT 102 K+ +T Sbjct: 64 FKFSSQT 70 >gi|330898835|gb|EGH30254.1| phosphoribosyltransferase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 244 Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ TQ+ + Sbjct: 21 CLLCDERSEVSTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDGLITRFKH 95 >gi|325130995|gb|EGC53722.1| comF/gntX family protein [Neisseria meningitidis OX99.30304] gi|325137094|gb|EGC59690.1| comF/gntX family protein [Neisseria meningitidis M0579] gi|325202904|gb|ADY98358.1| comF/gntX family protein [Neisseria meningitidis M01-240149] gi|325207297|gb|ADZ02749.1| comF/gntX family protein [Neisseria meningitidis NZ-05/33] Length = 241 Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 25/94 (26%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHIQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++R LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIRTLKHLADLGMVRPLANLMV 111 >gi|304407699|ref|ZP_07389350.1| amidophosphoribosyltransferase-like protein [Paenibacillus curdlanolyticus YK9] gi|304343182|gb|EFM09025.1| amidophosphoribosyltransferase-like protein [Paenibacillus curdlanolyticus YK9] Length = 300 Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 5/84 (5%) Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLP-LTQIRSVTLYCDMSCVLVRL 95 LC C ++ +I A + ++ RS Y D + L Sbjct: 60 LCKSCSEQLPWINAIACAVCGRPG----PCNDCARRSEAYFISNRSAVRYDDRIRECLAL 115 Query: 96 LKYHDRTDLAIMMAQWMFRVLEKI 119 KY L+ ++ + ++ Sbjct: 116 FKYRGDEKLSAPLSDLLAYAFRRL 139 >gi|229816413|ref|ZP_04446715.1| hypothetical protein COLINT_03467 [Collinsella intestinalis DSM 13280] gi|229808008|gb|EEP43808.1| hypothetical protein COLINT_03467 [Collinsella intestinalis DSM 13280] Length = 78 Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 20/72 (27%) Query: 45 IHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 + FI L + L + + ++ +VR K L Sbjct: 1 MQFIDPARCCLHCGAPFGAMVCTECAGAKTDLDRCLAAAVFDGPVGRIVRAYKDGGERRL 60 Query: 105 AIMMAQWMFRVL 116 A +A+ M Sbjct: 61 AAEIARIMLSAA 72 >gi|66047912|ref|YP_237753.1| phosphoribosyltransferase [Pseudomonas syringae pv. syringae B728a] gi|63258619|gb|AAY39715.1| Phosphoribosyltransferase [Pseudomonas syringae pv. syringae B728a] gi|330970893|gb|EGH70959.1| phosphoribosyltransferase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 244 Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ TQ+ + Sbjct: 21 CLLCDERSEVPAPICVPCEAELPWLGNACECCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDGLITRFKH 95 >gi|307544761|ref|YP_003897240.1| competence protein F [Halomonas elongata DSM 2581] gi|307216785|emb|CBV42055.1| competence protein F [Halomonas elongata DSM 2581] Length = 267 Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 9/90 (10%), Positives = 22/90 (24%), Gaps = 2/90 (2%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA--TEHILKNNKDNIDKDPLKS 69 + + + P C C C + + + + + Sbjct: 42 VDDWLRRLLPGRCAFCLAACESTAPWCQACHLALPWNLPACPACAEPQPAGSRARRCGRC 101 Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 +Q+ R Y L++ K+ Sbjct: 102 LQRAPAFDTARVPLRYEGELRGLMQGFKFQ 131 >gi|320331599|gb|EFW87537.1| competence protein ComF [Pseudomonas syringae pv. glycinea str. race 4] gi|330872324|gb|EGH06473.1| competence protein ComF [Pseudomonas syringae pv. glycinea str. race 4] Length = 244 Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + + ++ Q+ + Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDSLITRFKH 95 >gi|320326429|gb|EFW82482.1| competence protein ComF [Pseudomonas syringae pv. glycinea str. B076] Length = 244 Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + + ++ Q+ + Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDSLITRFKH 95 >gi|171060486|ref|YP_001792835.1| putative phosphoribosyl transferase [Leptothrix cholodnii SP-6] gi|170777931|gb|ACB36070.1| putative phosphoribosyl transferase [Leptothrix cholodnii SP-6] Length = 266 Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 6/114 (5%) Query: 4 IIQTVKSIIIELFHC--IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61 +++ + + + C + S+C + R R LC C +H + Sbjct: 23 VLRAAGRTLADAWRCGPAFGSLCRVCRRW--QRSALCEPCLR-LHAAPVPRCGRCAIEVA 79 Query: 62 ID-KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 M++ P++ + Y L+ K+++ +LA + M R Sbjct: 80 TGVAQCADCMRRPPPMSATFAAVDYGYPWDALIARFKFNEAVELARPLTGLMTR 133 >gi|330938548|gb|EGH42131.1| phosphoribosyltransferase [Pseudomonas syringae pv. pisi str. 1704B] Length = 244 Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ TQ+ + Sbjct: 21 CLLCDERSEVSTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDGLITRFKH 95 >gi|303238037|ref|ZP_07324580.1| ComF family protein [Prevotella disiens FB035-09AN] gi|302481827|gb|EFL44879.1| ComF family protein [Prevotella disiens FB035-09AN] Length = 234 Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 10/101 (9%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65 T S + LF + P CP+ R ++ LC C + H ++ ++ Sbjct: 2 TQISFLTRLFDLLAPRACPMCGRRLSISEQPLCAAC--NLALPRTNYH-----ENALENP 54 Query: 66 PLKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDL 104 + P+ + + Y + L+ LKY D ++ Sbjct: 55 VARLFWGKFPIEKGAAFLFYKPHSSTSRLIYKLKYFDSPEI 95 >gi|221135017|ref|ZP_03561320.1| competence protein [Glaciecola sp. HTCC2999] Length = 241 Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID---KDPLKSMQKDLPLTQI 79 C + + +C C + F+ A + N++ + + + + Sbjct: 11 RCLLCLQSTEQ--VICPLCLADCGFVNAPLLTQDLVEFNLNDTTEHFAHDVIVNAKFDGL 68 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111 + +Y VL+ LK++ + LA +MAQW Sbjct: 69 WVLDIYQYPLSVLIPKLKFYQQPHLARLMAQW 100 >gi|71734602|ref|YP_276823.1| competence protein ComF [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555155|gb|AAZ34366.1| competence protein ComF [Pseudomonas syringae pv. phaseolicola 1448A] Length = 244 Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 25/75 (33%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + + +C C +++ ++ + + ++ Q+ + Sbjct: 21 CLLCNERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDSLITRFKH 95 >gi|261823347|ref|YP_003261453.1| gluconate periplasmic binding protein [Pectobacterium wasabiae WPP163] gi|261607360|gb|ACX89846.1| gluconate periplasmic binding protein [Pectobacterium wasabiae WPP163] Length = 233 Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 31/75 (41%) Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95 +C +C + + + + + +Q P + ++ Y L++ Sbjct: 21 GICSYCQRHLPRLPTCCPRCGLPAGDTTRQCGRCLQNPPPWQSMTFISDYTPPINTLLKH 80 Query: 96 LKYHDRTDLAIMMAQ 110 K++ +T+LA ++A+ Sbjct: 81 FKFNGKTELAAVLAR 95 >gi|269128237|ref|YP_003301607.1| phosphoribosyltransferase [Thermomonospora curvata DSM 43183] gi|268313195|gb|ACY99569.1| phosphoribosyltransferase [Thermomonospora curvata DSM 43183] Length = 244 Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 19/118 (16%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRII----NLRFCLCGHCWSKIHFITATEHILKNNK 59 + + + + +L + P C + + L C + Sbjct: 5 VTRFLAGFLADLLDLVLPQHCAGCGAAVLRAGSSPRGLGPLC--------------PVCR 50 Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + P ++ +P SV Y ++ K R LA + + + R + Sbjct: 51 AALTGPPRRAGPAGMPFASW-SVADYEGPVRAMLNAYKEAGRVSLADPLGEALARAVR 107 >gi|148656009|ref|YP_001276214.1| amidophosphoribosyltransferase-like protein [Roseiflexus sp. RS-1] gi|148568119|gb|ABQ90264.1| amidophosphoribosyltransferase-like protein [Roseiflexus sp. RS-1] Length = 215 Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 28/98 (28%), Gaps = 20/98 (20%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 I L + P C ++ LC C ++ + + Sbjct: 7 IDHLLSLLLPDRCVGCGQL---GALLCDACRRRL-------VAYDGDLPRVADQ------ 50 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 LT ++ ++ V LKY R +A + Sbjct: 51 ----LTGVQVAYVFDGALRQAVHQLKYRSRQRMARPLG 84 >gi|89076067|ref|ZP_01162427.1| hypothetical ComF-related protein [Photobacterium sp. SKA34] gi|89048219|gb|EAR53801.1| hypothetical ComF-related protein [Photobacterium sp. SKA34] Length = 235 Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 4/89 (4%) Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHI-LKNNKDNIDKDPLKSMQKDLPLTQIRS 81 C + + C +C S F + + N ++ + + P ++ Sbjct: 22 CSLCQLPLEPNDDYWCHYCLS--QFPSPPYCQRCGTSTLNAEQYCGQCLTTPPPWQRLYR 79 Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + Y LV K+ + LA +A+ Sbjct: 80 LGEYQPPLPQLVSQFKFGKKFWLAKPLAK 108 >gi|300741841|ref|ZP_07071862.1| competence protein F [Rothia dentocariosa M567] gi|300381026|gb|EFJ77588.1| competence protein F [Rothia dentocariosa M567] Length = 274 Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 22/121 (18%) Query: 6 QTVKSIIIELFHCIYPSICPIYS-------RIINLRFCLCGHCWSKIHFITATEHILKNN 58 + K + + +P+ C R LC C + + T+ H Sbjct: 7 KRGKKALYAAWELFFPATCVGCGVGGTALLDAAGTRRALCTRCETSLRKQTSAVHT---- 62 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 +Q +P + +Y ++ +K RTD +A+ + R + Sbjct: 63 ---------PVLQHPVP--GAVAAGIYETTLAHVILSMKNAGRTDAVPELARALGRAVAT 111 Query: 119 I 119 I Sbjct: 112 I 112 >gi|330985850|gb|EGH83953.1| competence protein ComF [Pseudomonas syringae pv. lachrymans str. M301315] Length = 244 Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + + ++ Q+ + Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDSLITRFKH 95 >gi|289624783|ref|ZP_06457737.1| competence protein ComF [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289650640|ref|ZP_06481983.1| competence protein ComF [Pseudomonas syringae pv. aesculi str. 2250] gi|330871186|gb|EGH05895.1| competence protein ComF [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 244 Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + + ++ Q+ + Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDSLITRFKH 95 >gi|309789992|ref|ZP_07684568.1| amidophosphoribosyltransferase-like protein [Oscillochloris trichoides DG6] gi|308228012|gb|EFO81664.1| amidophosphoribosyltransferase-like protein [Oscillochloris trichoides DG6] Length = 212 Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 24/104 (23%) Query: 15 LFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 L ++P C + L C C + + + L + +D Sbjct: 4 LLALLFPDRCVGCGHL----GALFCPTCRAALR-----PYPLDDPPPGLD-------AML 47 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 +P LY + +KY + LA + + L Sbjct: 48 VPW-------LYAGPLRQAIHRMKYRSQRRLAAPLGDLLAEALR 84 >gi|258406303|ref|YP_003199045.1| competence protein F [Desulfohalobium retbaense DSM 5692] gi|257798530|gb|ACV69467.1| competence protein F [Desulfohalobium retbaense DSM 5692] Length = 256 Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 25/107 (23%), Gaps = 7/107 (6%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62 + VK+ L + P C +++ C F + Sbjct: 11 GVADAVKTWSRRLAGRLAPGRCLYCGAVLDAPGAGESLCHRCAPFFAPRPGGFCPGCGQL 70 Query: 63 DKD-------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102 +D P Q+ +Y ++ K R Sbjct: 71 LEDEAAPLHLCRSCRDAPQPWEQLAFFGVYQGPLREVILEYKLQGRL 117 >gi|78045138|ref|YP_360958.1| CRISPR-associated Csm1 family protein [Carboxydothermus hydrogenoformans Z-2901] gi|77997253|gb|ABB16152.1| CRISPR-associated protein, Csm1 family [Carboxydothermus hydrogenoformans Z-2901] Length = 738 Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 6/37 (16%) Query: 11 IIIELFHCIYPS------ICPIYSRIINLRFCLCGHC 41 +I E I+ ICPI R + LC C Sbjct: 360 LIKETPDLIFGPFDTPDNICPICGREVTGETGLCSFC 396 >gi|78067648|ref|YP_370417.1| phosphoribosyltransferase [Burkholderia sp. 383] gi|77968393|gb|ABB09773.1| Phosphoribosyltransferase [Burkholderia sp. 383] Length = 263 Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 17/129 (13%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF--------- 47 M + V+++ + P+ C + + +CG C W++ Sbjct: 10 MRVALSQVRALGARVAAVALPNRCALCGNM--SHAVVCGACDAAYWNEARLRCDVCALPL 67 Query: 48 -ITATEHILKNNKDNIDK-DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 I + P ++ Y L R LK+H + L Sbjct: 68 GIGQPRSPRGARAGRVAAYRCDACRAAPPPFDATLALADYRAPLDGLARGLKFHRQLALG 127 Query: 106 IMMAQWMFR 114 A + R Sbjct: 128 TEFAARLAR 136 >gi|257784788|ref|YP_003180005.1| amidophosphoribosyltransferase-like protein [Atopobium parvulum DSM 20469] gi|257473295|gb|ACV51414.1| amidophosphoribosyltransferase-like protein [Atopobium parvulum DSM 20469] Length = 249 Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 12/103 (11%) Query: 14 ELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFIT---ATEHILKNNKDNIDKDPLKS 69 + P+ C + L C C SK+ +IT A + + + + Sbjct: 13 STLELLAPTRCVVC----EKPGQLLCDECQSKLPWITQRWACPNCGAPYGKLVCSECMDK 68 Query: 70 MQKDLPLTQIRS---VTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 ++ + R+ + L+ LK LA ++A Sbjct: 69 KKRPVQWES-RAVICAMGFKGPPARLILTLKDGYELRLAPIIA 110 >gi|307728346|ref|YP_003905570.1| phosphoribosyltransferase [Burkholderia sp. CCGE1003] gi|307582881|gb|ADN56279.1| phosphoribosyltransferase [Burkholderia sp. CCGE1003] Length = 233 Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 31/110 (28%), Gaps = 9/110 (8%) Query: 16 FHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKNNKDNIDKDPLK 68 + P+ C + + LC C W+ + A + Sbjct: 1 MQALLPNACALCGNL--SHRPLCAFCDESYWNDGALRCRVCAVPLPVTFRGRRTSYRCGD 58 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + P ++ Y L LK+ + LA A+ + + + Sbjct: 59 CSSEMPPFDATFALADYRAPLDALAVGLKFRAQLMLAGEFARRLAHLAQD 108 >gi|257483057|ref|ZP_05637098.1| competence protein ComF [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011709|gb|EGH91765.1| competence protein ComF [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 244 Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 24/75 (32%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + + ++ Q+ + Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDSLITRFKH 95 >gi|315178825|gb|ADT85739.1| ComF family protein [Vibrio furnissii NCTC 11218] Length = 233 Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 7/92 (7%) Query: 22 SICPIYSRIINLRFC--LCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLT 77 C + ++ LC C + + T ++ + + P Sbjct: 16 PACQLCGLALHAPTKPRLCAAC---LAWYAPTPRCARCGLPCESATAQCGQCLSTPPPWH 72 Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 Q+ V Y V LKY + A +A Sbjct: 73 QLVCVGDYRFPLSHSVHQLKYQRQFWQARPLA 104 >gi|296134288|ref|YP_003641535.1| phosphoribosyltransferase [Thermincola sp. JR] gi|296032866|gb|ADG83634.1| phosphoribosyltransferase [Thermincola potens JR] Length = 251 Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 4/83 (4%) Query: 32 NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPLTQIRSVTLYCD 87 C C ++ + + D K + ++ +Y Sbjct: 25 EYEGDCCSRCLEELMENQMLSCRVCGRFFSKSPDEERVCHACRNKAPAYSFAKAAGIYDG 84 Query: 88 MSCVLVRLLKYHDRTDLAIMMAQ 110 + LLKY + LA ++A+ Sbjct: 85 RLREAIHLLKYTGKQSLADLLAR 107 >gi|227327614|ref|ZP_03831638.1| gluconate periplasmic binding protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 233 Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 2/76 (2%) Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQIRSVTLYCDMSCVLVR 94 +C +C + + + +Q P + ++ Y L++ Sbjct: 21 GICSYCQRHLPRL-PLCCPRCGLPSADTTHQCGRCLQNPPPWQSMTFISDYAPPFNTLLK 79 Query: 95 LLKYHDRTDLAIMMAQ 110 K+H +T+LA ++A+ Sbjct: 80 HFKFHGKTELAAVLAR 95 >gi|152997461|ref|YP_001342296.1| K+-dependent Na+/Ca+ exchanger related-protein [Marinomonas sp. MWYL1] gi|150838385|gb|ABR72361.1| K+-dependent Na+/Ca+ exchanger related-protein [Marinomonas sp. MWYL1] Length = 250 Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 5/108 (4%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 I E++ ++ + C I + I + LC C K + + Sbjct: 11 ISEVYKRLFLNQCYICN--IKCQSSLCHPCHKGFPANLKHCQHCKRPTNRNHVSCGQCQT 68 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P + + + L+ +K++ T + M+R+ + + Sbjct: 69 NPPPYRTCIAPYRFEGIIKTLIHSIKFNQGTHYIRPL---MYRLSKHL 113 >gi|332285810|ref|YP_004417721.1| hypothetical protein PT7_2557 [Pusillimonas sp. T7-7] gi|330429763|gb|AEC21097.1| hypothetical protein PT7_2557 [Pusillimonas sp. T7-7] Length = 246 Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 40/119 (33%), Gaps = 7/119 (5%) Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFC-LCGHCWSKI--HFITAT-EHILKNN 58 A + ++ L + P++C + + LCG+C+ + ++ + Sbjct: 2 AYLPALREFTARLLARV-PAVCGLCHD--SAYGGQLCGYCYQAVTQSMVSGALRCQVCQL 58 Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117 + Q ++ + Y +L+ LK + A M+A + + Sbjct: 59 ALDSQGACPDCTQHTPAFDRVIAAFDYAAPGDLLIHRLKVQRQFTSANMLAGLLADAVR 117 >gi|90412701|ref|ZP_01220702.1| hypothetical ComF-related protein [Photobacterium profundum 3TCK] gi|90326276|gb|EAS42695.1| hypothetical ComF-related protein [Photobacterium profundum 3TCK] Length = 237 Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 6/90 (6%) Query: 23 ICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDK--DPLKSMQKDLPLTQI 79 C + + + C HC + H + ++ + ++ P ++ Sbjct: 23 QCQLCQLPLPDNESIWCRHCIAHFP---QPPHCTRCGTTTVNPVEQCGQCLRSPPPWHRL 79 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + Y ++ LK++ + LA +A Sbjct: 80 YRLGEYDFPLKQIIHQLKFNGKFWLAKPLA 109 >gi|240014974|ref|ZP_04721887.1| hypothetical protein NgonD_10105 [Neisseria gonorrhoeae DGI18] gi|240081564|ref|ZP_04726107.1| hypothetical protein NgonF_09685 [Neisseria gonorrhoeae FA19] gi|240116577|ref|ZP_04730639.1| hypothetical protein NgonPID1_10148 [Neisseria gonorrhoeae PID18] gi|240122043|ref|ZP_04735005.1| hypothetical protein NgonPI_09815 [Neisseria gonorrhoeae PID24-1] gi|240129014|ref|ZP_04741675.1| hypothetical protein NgonS_10394 [Neisseria gonorrhoeae SK-93-1035] gi|268597659|ref|ZP_06131826.1| competence protein [Neisseria gonorrhoeae FA19] gi|268602245|ref|ZP_06136412.1| competence protein [Neisseria gonorrhoeae PID18] gi|268687393|ref|ZP_06154255.1| competence protein [Neisseria gonorrhoeae SK-93-1035] gi|268551447|gb|EEZ46466.1| competence protein [Neisseria gonorrhoeae FA19] gi|268586376|gb|EEZ51052.1| competence protein [Neisseria gonorrhoeae PID18] gi|268627677|gb|EEZ60077.1| competence protein [Neisseria gonorrhoeae SK-93-1035] Length = 241 Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 3/90 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + Y ++R LK+ +A +A Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107 >gi|220910542|ref|YP_002485853.1| hypothetical protein Cyan7425_5199 [Cyanothece sp. PCC 7425] gi|219867153|gb|ACL47492.1| conserved hypothetical protein [Cyanothece sp. PCC 7425] Length = 243 Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 16/105 (15%) Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70 I+ + ++ C R LC HC ++ K + + P Sbjct: 6 ILRKWLPFLFYYRCSFCQRKSAQP--LCRHCLPQV----------KTCQLSASVYPHFWS 53 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 R Y ++ LKY ++ LA + +W+ Sbjct: 54 THPPLFPWGR----YGGALKRIISDLKYKNQPQLARPLGEWLGEA 94 >gi|294101669|ref|YP_003553527.1| amidophosphoribosyltransferase-like protein [Aminobacterium colombiense DSM 12261] gi|293616649|gb|ADE56803.1| amidophosphoribosyltransferase-like protein [Aminobacterium colombiense DSM 12261] Length = 212 Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 22/102 (21%) Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68 +++ + H ++P CP+ RI + C C + I + Sbjct: 3 RNLKRWVEHFLWPVECPVCGRIASTG---CLSCLENL--IHNPIIRELGGDLTLMSGS-- 55 Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + D LV LKY L ++M Q Sbjct: 56 ---------------THHDTCRDLVLRLKYRGYGQLGVVMGQ 82 >gi|116622521|ref|YP_824677.1| phosphoribosyltransferase [Candidatus Solibacter usitatus Ellin6076] gi|116225683|gb|ABJ84392.1| phosphoribosyltransferase [Candidatus Solibacter usitatus Ellin6076] Length = 224 Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 22/95 (23%), Gaps = 10/95 (10%) Query: 22 SICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81 C F C C + F + + + Sbjct: 3 PRCIQAPEPFEAEF-YCVSC--RTPF-------QNAFPLDDNGRCALCRSGLRGFDAAYA 52 Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116 Y L+ L KY LA + + + R + Sbjct: 53 FGAYEGALRRLIHLFKYGKIRTLARPLGRLLARAM 87 >gi|323452160|gb|EGB08035.1| hypothetical protein AURANDRAFT_71712 [Aureococcus anophagefferens] Length = 902 Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 21/77 (27%), Gaps = 2/77 (2%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60 +P+ F IY S + + + W+K H + L Sbjct: 295 LPSYYARAFPRNEVAFSLIYASATLVCGALSSSVGGAIADRWAKTH--SGAHGFLPAVGA 352 Query: 61 NIDKDPLKSMQKDLPLT 77 + P +M + Sbjct: 353 LLSIGPTAAMFYVPSFS 369 >gi|298386098|ref|ZP_06995655.1| competence protein F-related protein [Bacteroides sp. 1_1_14] gi|298261326|gb|EFI04193.1| competence protein F-related protein [Bacteroides sp. 1_1_14] Length = 226 Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 11/102 (10%) Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73 +P C + + C+C C + D K Sbjct: 5 FLSLWFPRCCVVCGGSLAKGEECICTMC--------NINLPRTDYHLRKDNPVEKLFWGK 56 Query: 74 LPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 PL + S Y S ++ LKY + ++ +M ++M Sbjct: 57 FPLERATSFFFYRKGSDFRQVLHQLKYGGQKEIGAIMGRYMA 98 >gi|77461398|ref|YP_350905.1| phosphoribosyltransferase [Pseudomonas fluorescens Pf0-1] gi|77385401|gb|ABA76914.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 246 Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 7/75 (9%), Positives = 20/75 (26%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + + +C C + + ++ +Q+ + Sbjct: 21 CLLCDEPADAQIPICTACETDLPWLGDQCLTCALPLPAYGLTCGGCLQEPPAFETVAVPW 80 Query: 84 LYCDMSCVLVRLLKY 98 Y L+ K+ Sbjct: 81 TYSFPVDTLITRFKH 95 >gi|308071112|ref|YP_003872717.1| amidophosphoribosyltransferase [Paenibacillus polymyxa E681] gi|305860391|gb|ADM72179.1| Predicted amidophosphoribosyltransferase [Paenibacillus polymyxa E681] Length = 275 Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 4/100 (4%) Query: 23 ICPIYSRIINLRF---CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C +C C +I ++ + D +K + Sbjct: 21 TCIACGTFTGRFSEFSGICTSCSLQIPWVYNIRCVHCGRPTFC-PDCVKFDRLVRYFVCN 79 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 RS T Y M + KY ++ + M R + + Sbjct: 80 RSATSYTPMMREWIGQFKYRGNEKYGSLLGEIMNRAYQAM 119 >gi|219849420|ref|YP_002463853.1| amidophosphoribosyltransferase-like protein [Chloroflexus aggregans DSM 9485] gi|219543679|gb|ACL25417.1| amidophosphoribosyltransferase-like protein [Chloroflexus aggregans DSM 9485] Length = 207 Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 27/101 (26%), Gaps = 21/101 (20%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQ 78 ++P C R+ F C +C + + P LT Sbjct: 5 LFPDYCAGCGRLTGELF--CANCRALLR-------------------PYPPFPPPTGLTA 43 Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 R Y + LKY R +A + + + Sbjct: 44 ARVAFRYEGGLAHAIHRLKYGHRRRIARPLGDLLAAAAGPL 84 >gi|299768652|ref|YP_003730678.1| putative DNA transformation protein (ComF) [Acinetobacter sp. DR1] gi|298698740|gb|ADI89305.1| putative DNA transformation protein (ComF) [Acinetobacter sp. DR1] Length = 209 Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 2/39 (5%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT 51 L + P C + + + LC CW ++ ++ T Sbjct: 8 QHLIQLLSP--CLLCESDVREKHSLCKDCWKQLPWLKQT 44 >gi|73540017|ref|YP_294537.1| putative amidophosphoribosyltransferase [Ralstonia eutropha JMP134] gi|72117430|gb|AAZ59693.1| putative amidophosphoribosyltransferases [Ralstonia eutropha JMP134] Length = 222 Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 24/85 (28%), Gaps = 5/85 (5%) Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKIHF-ITATEHILKNNKDNIDKDPLKSMQKDL 74 + P C + +C C +++ + ++ + Q Sbjct: 1 MRKLLPCACALCG--TVQDEVVCRDCVAELLYPVSRCPVCAMGLAPG--EPCRACAQHRP 56 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYH 99 + ++ Y LV LKY Sbjct: 57 DFDRAFTLGDYGIPQDSLVLALKYG 81 >gi|170734195|ref|YP_001766142.1| phosphoribosyltransferase [Burkholderia cenocepacia MC0-3] gi|169817437|gb|ACA92020.1| phosphoribosyltransferase [Burkholderia cenocepacia MC0-3] Length = 265 Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 21/136 (15%) Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHFITATEHILK 56 + ++ V+++ + + P+ C + + +CG C W++ + L Sbjct: 10 LRVVLSQVRTLAVRVAAATLPNRCALCGNL--SHAVICGACDAAYWNEAQ-LRCEVCALP 66 Query: 57 NNKDNIDK--------------DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102 + P ++ Y L R LK+H R Sbjct: 67 LGVGHARSAGGGRLGAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGLKFHARL 126 Query: 103 DLAIMMAQWMFRVLEK 118 L A + R+++ Sbjct: 127 ALGGEFAARLARLVDD 142 >gi|325680291|ref|ZP_08159851.1| hypothetical protein CUS_5773 [Ruminococcus albus 8] gi|324108000|gb|EGC02256.1| hypothetical protein CUS_5773 [Ruminococcus albus 8] Length = 270 Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFIT 49 CP+ + + LC C S++ FI Sbjct: 3 CPMCGKSVGDHDALCPSCGSEL-FID 27 >gi|167585365|ref|ZP_02377753.1| phosphoribosyltransferase [Burkholderia ubonensis Bu] Length = 172 Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 31/105 (29%), Gaps = 9/105 (8%) Query: 21 PSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKNNKDNIDKDPLKSMQKD 73 P C + + +C C W++ + A + + Sbjct: 27 PYRCALCGNM--SHTVICAGCDAAYWNEARLRCAVCAVPLAPGHARRAAGYRCDACRAAP 84 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 P ++ Y L R LK+H R L A + R+L Sbjct: 85 PPFDATLALADYRAPLDGLARGLKFHARLALGAEFAGRLARLLAD 129 >gi|311745081|ref|ZP_07718866.1| competence protein F-related protein [Algoriphagus sp. PR1] gi|126577594|gb|EAZ81814.1| competence protein F-related protein [Algoriphagus sp. PR1] Length = 230 Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 6/88 (6%) Query: 19 IYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77 I+P C + R + + CLC C + T + ++++ Q L ++ Sbjct: 13 IFPRNCDLCGRSLFDFESCLCKICVGMLP---KTIYHQMPAENDLTDKLKGLSQIGLAMS 69 Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLA 105 +R +S L+ LKY ++ ++A Sbjct: 70 FLR--FTKNGVSQKLLHRLKYRNKPEIA 95 >gi|213026624|ref|ZP_03341071.1| gluconate periplasmic binding protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 49 Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 MQK P ++ SV+ Y +LV LK+ R+++ Sbjct: 1 MQKPPPWQRLVSVSDYTPPLSLLVHQLKFTRRSEI 35 >gi|167031407|ref|YP_001666638.1| phosphoribosyltransferase [Pseudomonas putida GB-1] gi|166857895|gb|ABY96302.1| phosphoribosyltransferase [Pseudomonas putida GB-1] Length = 243 Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 30/88 (34%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + R+ LC C ++ ++ + ++ Q+ ++ Sbjct: 20 TCLLCDEPAEQRYPLCTACEQELPWLGDHCQHCALPLPMAGLTCAQCCRRLPAFDQVIAL 79 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 Y L+ K++ + + +MA+ Sbjct: 80 WHYGFPVDTLISRFKHNRQWPVGRLMAE 107 >gi|297181074|gb|ADI17273.1| hypothetical protein [uncultured alpha proteobacterium HF0070_17D04] Length = 91 Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 13/30 (43%) Query: 85 YCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 Y D+S L+ K+ D L + M R Sbjct: 33 YKDVSRKLILAFKHGDGLQLTPFLKSLMAR 62 >gi|268682965|ref|ZP_06149827.1| competence protein [Neisseria gonorrhoeae PID332] gi|268623249|gb|EEZ55649.1| competence protein [Neisseria gonorrhoeae PID332] Length = 199 Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 3/90 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 + Y ++R LK+ +A +A Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107 >gi|253995944|ref|YP_003048008.1| hypothetical protein Mmol_0571 [Methylotenera mobilis JLW8] gi|253982623|gb|ACT47481.1| conserved hypothetical protein [Methylotenera mobilis JLW8] Length = 253 Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 7/100 (7%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK----DPLKSMQKDLPLTQ 78 C + + LC C + + + + N + + + Sbjct: 30 TCMLCTSRHGGDLGLCAPCMADLPWHQTAQCPQCALAINDNLYGGGLCGGCLSEPPSFDA 89 Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAI-MMAQWM--FRV 115 R+ Y L++ KY+ +LA W+ R Sbjct: 90 TRATFTYNYPLDGLLQHYKYNASLNLARTFATLWLDAQRA 129 >gi|283852706|ref|ZP_06369971.1| phosphoribosyltransferase [Desulfovibrio sp. FW1012B] gi|283571884|gb|EFC19879.1| phosphoribosyltransferase [Desulfovibrio sp. FW1012B] Length = 254 Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 9/100 (9%), Positives = 25/100 (25%), Gaps = 7/100 (7%) Query: 23 ICPIYSRIINLR---FCLCGHCWSKIHFITATEHILKN----NKDNIDKDPLKSMQKDLP 75 C + ++ +C C +++ + + Sbjct: 25 RCQVCHGLLTGPAGAGSVCPACAARLAPRLGGHCPRCGELAEDPAAPPLVCPACLAGGRS 84 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 Y + LV K++ R ++A ++ Sbjct: 85 WDGFAFHGRYEGLLRDLVLGFKFNGRLGQGRLLAGFLAEA 124 >gi|126666962|ref|ZP_01737938.1| probable phosphoribosyl transferase [Marinobacter sp. ELB17] gi|126628678|gb|EAZ99299.1| probable phosphoribosyl transferase [Marinobacter sp. ELB17] Length = 252 Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 24/88 (27%), Gaps = 3/88 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHF--ITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 C + LC C++ + + L D + +Q+ Sbjct: 32 RCVGCLNPVARN-GLCQGCYNDLPWNRWHCRCCALPLPFPAADHLCGECLQRPPAFDLTL 90 Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMM 108 + Y ++ KY + A + Sbjct: 91 APLRYQFPVAAMIGRYKYQGQRAYARPL 118 >gi|121639131|ref|YP_979355.1| hypothetical protein BCG_3271c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991624|ref|YP_002646313.1| hypothetical protein JTY_3267 [Mycobacterium bovis BCG str. Tokyo 172] gi|121494779|emb|CAL73260.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774739|dbj|BAH27545.1| hypothetical protein JTY_3267 [Mycobacterium bovis BCG str. Tokyo 172] Length = 213 Score = 35.3 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 17/95 (17%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 + + P C C C +++ H++ D + Sbjct: 1 MLDLVLPLECGGCGAPATRW---CAACAAELSVAAGEPHVVSPRVD----------PQVP 47 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 R Y + + +K H R DL +A Sbjct: 48 VFALGR----YAGVRRQAILAMKEHGRRDLVAPLA 78 >gi|167628887|ref|YP_001679386.1| amidophosphoribosyltransferase, putative [Heliobacterium modesticaldum Ice1] gi|167591627|gb|ABZ83375.1| amidophosphoribosyltransferase, putative [Heliobacterium modesticaldum Ice1] Length = 393 Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 18/49 (36%) Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114 ++ + ++ Y + + LKY R +A + + M R Sbjct: 134 CHNCRREAPLFLRAWNIGPYEGILRQSIHDLKYGGRRSIATALGRMMAR 182 >gi|15610378|ref|NP_217759.1| hypothetical protein Rv3242c [Mycobacterium tuberculosis H37Rv] gi|31794422|ref|NP_856915.1| hypothetical protein Mb3270c [Mycobacterium bovis AF2122/97] gi|148663105|ref|YP_001284628.1| hypothetical protein MRA_3283 [Mycobacterium tuberculosis H37Ra] gi|148824444|ref|YP_001289198.1| hypothetical protein TBFG_13271 [Mycobacterium tuberculosis F11] gi|215405254|ref|ZP_03417435.1| hypothetical protein Mtub0_16486 [Mycobacterium tuberculosis 02_1987] gi|215413120|ref|ZP_03421821.1| hypothetical protein Mtub9_17201 [Mycobacterium tuberculosis 94_M4241A] gi|215428723|ref|ZP_03426642.1| hypothetical protein MtubT9_20988 [Mycobacterium tuberculosis T92] gi|215432206|ref|ZP_03430125.1| hypothetical protein MtubE_16424 [Mycobacterium tuberculosis EAS054] gi|215447545|ref|ZP_03434297.1| hypothetical protein MtubT_16945 [Mycobacterium tuberculosis T85] gi|218755027|ref|ZP_03533823.1| hypothetical protein MtubG1_17059 [Mycobacterium tuberculosis GM 1503] gi|253800284|ref|YP_003033285.1| hypothetical protein TBMG_03290 [Mycobacterium tuberculosis KZN 1435] gi|254233855|ref|ZP_04927180.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254365866|ref|ZP_04981911.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|260188290|ref|ZP_05765764.1| hypothetical protein MtubCP_20008 [Mycobacterium tuberculosis CPHL_A] gi|260202398|ref|ZP_05769889.1| hypothetical protein MtubT4_20496 [Mycobacterium tuberculosis T46] gi|260202403|ref|ZP_05769894.1| hypothetical protein MtubT4_20523 [Mycobacterium tuberculosis T46] gi|260206593|ref|ZP_05774084.1| hypothetical protein MtubK8_20057 [Mycobacterium tuberculosis K85] gi|289448930|ref|ZP_06438674.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289555520|ref|ZP_06444730.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289571469|ref|ZP_06451696.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289575962|ref|ZP_06456189.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289747060|ref|ZP_06506438.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289751936|ref|ZP_06511314.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289755365|ref|ZP_06514743.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289759382|ref|ZP_06518760.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289763430|ref|ZP_06522808.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294993818|ref|ZP_06799509.1| hypothetical protein Mtub2_04706 [Mycobacterium tuberculosis 210] gi|297732892|ref|ZP_06962010.1| hypothetical protein MtubKR_17462 [Mycobacterium tuberculosis KZN R506] gi|298526718|ref|ZP_07014127.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306777571|ref|ZP_07415908.1| hypothetical protein TMAG_02695 [Mycobacterium tuberculosis SUMu001] gi|306786115|ref|ZP_07424437.1| hypothetical protein TMCG_01665 [Mycobacterium tuberculosis SUMu003] gi|306795003|ref|ZP_07433305.1| hypothetical protein TMEG_03639 [Mycobacterium tuberculosis SUMu005] gi|306805049|ref|ZP_07441717.1| hypothetical protein TMHG_02463 [Mycobacterium tuberculosis SUMu008] gi|306969338|ref|ZP_07481999.1| hypothetical protein TMIG_02759 [Mycobacterium tuberculosis SUMu009] gi|306973690|ref|ZP_07486351.1| hypothetical protein TMJG_03426 [Mycobacterium tuberculosis SUMu010] gi|307081399|ref|ZP_07490569.1| hypothetical protein TMKG_02501 [Mycobacterium tuberculosis SUMu011] gi|308370201|ref|ZP_07666889.1| hypothetical protein TMBG_01937 [Mycobacterium tuberculosis SUMu002] gi|308372474|ref|ZP_07667386.1| hypothetical protein TMDG_02077 [Mycobacterium tuberculosis SUMu004] gi|308374814|ref|ZP_07667868.1| hypothetical protein TMFG_00451 [Mycobacterium tuberculosis SUMu006] gi|308376040|ref|ZP_07668172.1| hypothetical protein TMGG_02790 [Mycobacterium tuberculosis SUMu007] gi|308406096|ref|ZP_07669505.1| hypothetical protein TMLG_02014 [Mycobacterium tuberculosis SUMu012] gi|313660224|ref|ZP_07817104.1| hypothetical protein MtubKV_17462 [Mycobacterium tuberculosis KZN V2475] gi|2072709|emb|CAB08343.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|31620018|emb|CAD95362.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|124599384|gb|EAY58488.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134151379|gb|EBA43424.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|148507257|gb|ABQ75066.1| hypothetical protein MRA_3283 [Mycobacterium tuberculosis H37Ra] gi|148722971|gb|ABR07596.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|253321787|gb|ACT26390.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|289421888|gb|EFD19089.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289440152|gb|EFD22645.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289540393|gb|EFD44971.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289545223|gb|EFD48871.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289687588|gb|EFD55076.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289692523|gb|EFD59952.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289695952|gb|EFD63381.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289710936|gb|EFD74952.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289714946|gb|EFD78958.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|298496512|gb|EFI31806.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308214113|gb|EFO73512.1| hypothetical protein TMAG_02695 [Mycobacterium tuberculosis SUMu001] gi|308325043|gb|EFP13894.1| hypothetical protein TMBG_01937 [Mycobacterium tuberculosis SUMu002] gi|308329265|gb|EFP18116.1| hypothetical protein TMCG_01665 [Mycobacterium tuberculosis SUMu003] gi|308333095|gb|EFP21946.1| hypothetical protein TMDG_02077 [Mycobacterium tuberculosis SUMu004] gi|308336782|gb|EFP25633.1| hypothetical protein TMEG_03639 [Mycobacterium tuberculosis SUMu005] gi|308340616|gb|EFP29467.1| hypothetical protein TMFG_00451 [Mycobacterium tuberculosis SUMu006] gi|308344557|gb|EFP33408.1| hypothetical protein TMGG_02790 [Mycobacterium tuberculosis SUMu007] gi|308348353|gb|EFP37204.1| hypothetical protein TMHG_02463 [Mycobacterium tuberculosis SUMu008] gi|308353190|gb|EFP42041.1| hypothetical protein TMIG_02759 [Mycobacterium tuberculosis SUMu009] gi|308356930|gb|EFP45781.1| hypothetical protein TMJG_03426 [Mycobacterium tuberculosis SUMu010] gi|308360931|gb|EFP49782.1| hypothetical protein TMKG_02501 [Mycobacterium tuberculosis SUMu011] gi|308364471|gb|EFP53322.1| hypothetical protein TMLG_02014 [Mycobacterium tuberculosis SUMu012] gi|323718111|gb|EGB27293.1| hypothetical protein TMMG_02390 [Mycobacterium tuberculosis CDC1551A] gi|326902530|gb|EGE49463.1| hypothetical protein TBPG_00375 [Mycobacterium tuberculosis W-148] gi|328460019|gb|AEB05442.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 213 Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 17/95 (17%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 + + P C C C +++ H++ D + Sbjct: 1 MLDLVLPLECGGCGAPATRW---CAACAAELSVAAGEPHVVSPRVD----------PQVP 47 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 R Y + + +K H R DL +A Sbjct: 48 VFALGR----YAGVRRQAILAMKEHGRRDLVAPLA 78 >gi|299142045|ref|ZP_07035179.1| competence protein F [Prevotella oris C735] gi|298576507|gb|EFI48379.1| competence protein F [Prevotella oris C735] Length = 231 Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 14/116 (12%) Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66 + S + F I P +C + R+ +C C + T++ L +D Sbjct: 1 MISFLDRFFDLIAPRLCAVCGSRLTVSEKMICAPCNRHLP---RTDYALSP----LDNPL 53 Query: 67 LKSMQKDLPLTQIRSVTLYCDM--SCVLVRLLKYHDRT----DLAIMMAQWMFRVL 116 + K +P+ + + Y + + LKYH R L MMA M Sbjct: 54 CRIFWKQVPIEKAAAWFYYSAKSPASRAIYDLKYHHRAAIGHQLGEMMACEMQANG 109 >gi|28896921|ref|NP_796526.1| ComF-like protein [Vibrio parahaemolyticus RIMD 2210633] gi|153837883|ref|ZP_01990550.1| competence protein F [Vibrio parahaemolyticus AQ3810] gi|260365892|ref|ZP_05778386.1| ComF family protein [Vibrio parahaemolyticus K5030] gi|260895530|ref|ZP_05904026.1| ComF family protein [Vibrio parahaemolyticus Peru-466] gi|308126565|ref|ZP_05910949.2| ComF family protein [Vibrio parahaemolyticus AQ4037] gi|28805129|dbj|BAC58410.1| ComF-related protein [Vibrio parahaemolyticus RIMD 2210633] gi|149748746|gb|EDM59591.1| competence protein F [Vibrio parahaemolyticus AQ3810] gi|308088554|gb|EFO38249.1| ComF family protein [Vibrio parahaemolyticus Peru-466] gi|308109597|gb|EFO47137.1| ComF family protein [Vibrio parahaemolyticus AQ4037] gi|308113432|gb|EFO50972.1| ComF family protein [Vibrio parahaemolyticus K5030] Length = 241 Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 16/115 (13%) Query: 13 IELFHCIYPSICPIYS---RIINLRFCL--CGHCWSKIHFI---TATEHILKNNKDNIDK 64 + H + S C + + L C HC+ + + LK + NI+ Sbjct: 7 QNIMHRVLSSQCGLCRFPIQATAQPNALRWCDHCYQYLTPVKRCQRCGLSLKAEEANIES 66 Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 + + + P ++ ++ Y V+ K H +T W R L ++ Sbjct: 67 ICGECLSEPPPWQRLFTLGDYDFPLSREVQRFKDHGQT--------WHVRALTQL 113 >gi|238028708|ref|YP_002912939.1| phosphoribosyltransferase [Burkholderia glumae BGR1] gi|237877902|gb|ACR30235.1| Phosphoribosyltransferase [Burkholderia glumae BGR1] Length = 274 Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 19/53 (35%) Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118 + P ++ Y LV LK+ R L + A+ + R + + Sbjct: 97 CGACRRAPPPFDATFALADYRPPLASLVLDLKFGARLALGRLFAERLARAVRE 149 >gi|51598916|ref|YP_073104.1| hypothetical protein BG0684 [Borrelia garinii PBi] gi|51573487|gb|AAU07512.1| hypothetical protein BG0684 [Borrelia garinii PBi] Length = 118 Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 7/70 (10%), Positives = 16/70 (22%), Gaps = 6/70 (8%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD- 73 + + C + L +C +C +K+ I + Sbjct: 1 MARVTFEVFCEQCGEKVGLNRSICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPF 60 Query: 74 -----LPLTQ 78 P + Sbjct: 61 QELKEKPFKR 70 >gi|293391254|ref|ZP_06635588.1| protein GntX [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951788|gb|EFE01907.1| protein GntX [Aggregatibacter actinomycetemcomitans D7S-1] Length = 228 Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 9/84 (10%), Positives = 26/84 (30%), Gaps = 6/84 (7%) Query: 19 IYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQKDLP 75 ++ S C + + LC C I + + + ++++ Sbjct: 3 VFQSCCVHCHTPLKLAKHGLCSRC---NRTIRRFAYCGCCGAELAENALHCGNCLRQEPA 59 Query: 76 LTQIRSVTLYCDMSCVLVRLLKYH 99 ++ + Y + L+ K+ Sbjct: 60 WDRMVIIGRYNEPLSTLIHRFKFQ 83 >gi|325135072|gb|EGC57700.1| comF/gntX family protein [Neisseria meningitidis M13399] Length = 241 Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 26/94 (27%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRNDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++R LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMVQPLADLMM 111 >gi|254483220|ref|ZP_05096453.1| hypothetical protein GPB2148_406 [marine gamma proteobacterium HTCC2148] gi|214036591|gb|EEB77265.1| hypothetical protein GPB2148_406 [marine gamma proteobacterium HTCC2148] Length = 240 Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 38/106 (35%), Gaps = 6/106 (5%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65 V S I L ++P+ C + LC C +++ ++ + + Sbjct: 2 VNSAIQALGGALFPTRCCLCQWSCAGTLPLCDDCRAEL--VSNQQCCQQCAVPLATGSAV 59 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLK-YHDRTDLAIMMAQ 110 + + ++ + LY + ++ K + DR L ++A Sbjct: 60 CGDCLSRPPHYDRVIAPWLYGEYLAYIIGRWKFHGDRA-LTPLLAN 104 >gi|28572301|ref|NP_789081.1| hypothetical protein TW138 [Tropheryma whipplei TW08/27] gi|28410432|emb|CAD66818.1| conserved hypothetical protein (possible ATP-binding) [Tropheryma whipplei TW08/27] Length = 231 Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 23/92 (25%), Gaps = 23/92 (25%) Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77 YP+ CP LC C++++ D I Sbjct: 4 LFYPTSCPCCGM---QDTTLCDLCFARLA--ERPYRESLAGLDVI--------------- 43 Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 S Y + + K R LA M Sbjct: 44 ---SCCDYTPTARAFITAYKVMKRMTLAKFMG 72 >gi|167967994|ref|ZP_02550271.1| hypothetical protein MtubH3_08123 [Mycobacterium tuberculosis H37Ra] gi|219559300|ref|ZP_03538376.1| hypothetical protein MtubT1_19152 [Mycobacterium tuberculosis T17] gi|254552345|ref|ZP_05142792.1| hypothetical protein Mtube_18153 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289444818|ref|ZP_06434562.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289444823|ref|ZP_06434567.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|297635895|ref|ZP_06953675.1| hypothetical protein MtubK4_17307 [Mycobacterium tuberculosis KZN 4207] gi|289417737|gb|EFD14977.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289417742|gb|EFD14982.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length = 237 Score = 34.9 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 17/95 (17%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 + + P C C C +++ H++ D + Sbjct: 25 VLDLVLPLECGGCGAPATRW---CAACAAELSVAAGEPHVVSPRVD----------PQVP 71 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 R Y + + +K H R DL +A Sbjct: 72 VFALGR----YAGVRRQAILAMKEHGRRDLVAPLA 102 >gi|15842831|ref|NP_337868.1| hypothetical protein MT3340 [Mycobacterium tuberculosis CDC1551] gi|13883160|gb|AAK47682.1| hypothetical protein MT3340 [Mycobacterium tuberculosis CDC1551] Length = 241 Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 17/95 (17%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 + + P C C C +++ H++ D + Sbjct: 29 VLDLVLPLECGGCGAPATRW---CAACAAELSVAAGEPHVVSPRVD----------PQVP 75 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109 R Y + + +K H R DL +A Sbjct: 76 VFALGR----YAGVRRQAILAMKEHGRRDLVAPLA 106 >gi|325128978|gb|EGC51829.1| comF/gntX family protein [Neisseria meningitidis N1568] Length = 241 Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 26/94 (27%), Gaps = 3/94 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 C + + +C C + + A L +K ++ Sbjct: 18 RCVLCHGSSGVSDGICAGCRNDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77 Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + Y ++R LK+ + +A M Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMVQPLADLMM 111 >gi|330838209|ref|YP_004412789.1| phosphoribosyltransferase [Selenomonas sputigena ATCC 35185] gi|329745973|gb|AEB99329.1| phosphoribosyltransferase [Selenomonas sputigena ATCC 35185] Length = 229 Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 12/31 (38%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKI 45 + ++P+ CP R C C S+ Sbjct: 14 VSSVVFPARCPACGAYCERRGGWCAPCLSRT 44 >gi|50123053|ref|YP_052220.1| gluconate periplasmic-binding protein [Pectobacterium atrosepticum SCRI1043] gi|49613579|emb|CAG77030.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 233 Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 30/75 (40%) Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95 +C +C + + + + +Q P + ++ Y L++ Sbjct: 21 GICSYCQRHFPRLPTCCPRCGLPTGDTTRQCGRCLQDPPPWQSMTFISDYAPPFNTLLKH 80 Query: 96 LKYHDRTDLAIMMAQ 110 K+H +T+LA ++A+ Sbjct: 81 FKFHGKTELAAVLAR 95 >gi|293189439|ref|ZP_06608159.1| putative purine/pyrimidine phosphoribosyl transferase [Actinomyces odontolyticus F0309] gi|292821529|gb|EFF80468.1| putative purine/pyrimidine phosphoribosyl transferase [Actinomyces odontolyticus F0309] Length = 238 Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 25/92 (27%), Gaps = 19/92 (20%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 + L + P C LC C L+ ++ Sbjct: 1 MRGLVGALLPVQCAGCRAW---DEVLCPSC-------------RSLAGCPAHVASLEGVR 44 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103 LPL ++ Y +V K+ RTD Sbjct: 45 GPLPLV---AIGDYDGPLRRIVLAAKHSARTD 73 >gi|207727801|ref|YP_002256195.1| competence protein f-related protein [Ralstonia solanacearum MolK2] gi|206591042|emb|CAQ56654.1| competence protein f-related protein [Ralstonia solanacearum MolK2] Length = 240 Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 6/104 (5%) Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKI-HFITAT---EHILKNNKDNIDKDPLKSMQ 71 F + P C + + +C C + + + + ++ + + + Sbjct: 14 FRHLLPCACALCGAV--QHDLVCAGCIADLDPLLERRRCRQCARPLDRRHPARHCPACLA 71 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115 + Y LV LK+ + LA +A+ + Sbjct: 72 GAPDFDATVVIADYAWPLNHLVTGLKFGAQLPLAAWLAERLADA 115 >gi|304437879|ref|ZP_07397826.1| FHA domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369101|gb|EFM22779.1| FHA domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 88 Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 4/65 (6%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 CP + + C HC I I+ ++ D +S P ++ + Sbjct: 4 CPKCEKFVPSTATACPHC--GIPIISGFSPNYGAG-FSLGDDETESRNDAPP-AKVVNAD 59 Query: 84 LYCDM 88 LY D+ Sbjct: 60 LYDDV 64 >gi|90581402|ref|ZP_01237197.1| hypothetical ComF-related protein [Vibrio angustum S14] gi|90437379|gb|EAS62575.1| hypothetical ComF-related protein [Vibrio angustum S14] Length = 235 Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 4/89 (4%) Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHI-LKNNKDNIDKDPLKSMQKDLPLTQIRS 81 C + + C +C S F + + N ++ + P ++ Sbjct: 22 CSLCQLPLEPNDDYWCHYCLS--QFPSPPYCQRCGTSTLNAEQYCGHCLTTPPPWQRLYR 79 Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 + Y L+ K+ LA +A+ Sbjct: 80 LGEYQPPLQQLISQFKFGKNFWLAKPLAK 108 >gi|330954916|gb|EGH55176.1| phosphoribosyltransferase [Pseudomonas syringae Cit 7] Length = 244 Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 23/75 (30%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83 C + + +C C +++ ++ + ++ Q+ + Sbjct: 21 CLLCDERSEVPTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQTPGFAQVIAPW 80 Query: 84 LYCDMSCVLVRLLKY 98 LY L+ K+ Sbjct: 81 LYDFPVDGLITRFKH 95 >gi|317131754|ref|YP_004091068.1| phosphoribosyltransferase [Ethanoligenens harbinense YUAN-3] gi|315469733|gb|ADU26337.1| phosphoribosyltransferase [Ethanoligenens harbinense YUAN-3] Length = 225 Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 15/48 (31%) Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN 57 S++ + ++P+ C ++ C C K + Sbjct: 2 SLLERVAGVLFPARCVFCGAVVPQGTFACPACAGKAPRVEEPVCSGCG 49 >gi|300313450|ref|YP_003777542.1| amidophosphoribosyltransferase [Herbaspirillum seropedicae SmR1] gi|300076235|gb|ADJ65634.1| amidophosphoribosyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 299 Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 22/86 (25%), Gaps = 9/86 (10%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATE-----HILKNNKDNIDKDPLKSMQKD 73 + PS C + R LC C F T + + ++ Sbjct: 66 LLPSACALCGA--EGREILCAPCHK--RFYTRQHRRCIQCAMPMPVTGKELRCGACLKDR 121 Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYH 99 T Y S L LK+ Sbjct: 122 PAFDATIVATDYFAPSDQLALALKFG 147 >gi|224537616|ref|ZP_03678155.1| hypothetical protein BACCELL_02496 [Bacteroides cellulosilyticus DSM 14838] gi|224520758|gb|EEF89863.1| hypothetical protein BACCELL_02496 [Bacteroides cellulosilyticus DSM 14838] Length = 184 Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Query: 75 PLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113 PL + S Y S ++ LKY R +L +M + M Sbjct: 15 PLERATSYFFYRKGSDFRRILHQLKYGGRKELGAVMGRCMA 55 >gi|92114417|ref|YP_574345.1| hypothetical protein Csal_2296 [Chromohalobacter salexigens DSM 3043] gi|91797507|gb|ABE59646.1| conserved hypothetical protein [Chromohalobacter salexigens DSM 3043] Length = 241 Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 23/87 (26%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 I + P C C C++ + + ++ Sbjct: 17 IDQAASIALPGQCAFCMGETPAGQAWCDACFAALPWNRVACRRCAEPLARPAALCGHCLR 76 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98 R+ Y D + +L++ K+ Sbjct: 77 AAPAFDVTRAPLRYEDAAQMLLQRFKF 103 >gi|299534094|ref|ZP_07047446.1| hypothetical protein CTS44_24793 [Comamonas testosteroni S44] gi|298718003|gb|EFI59008.1| hypothetical protein CTS44_24793 [Comamonas testosteroni S44] Length = 254 Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 8/96 (8%) Query: 21 PSICPIYSRIINLRFCLCGHC---WSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77 PS C I R R +C C W++ + +++ L Sbjct: 32 PSQCAICGRWPGPR--ICRDCHARWAQHK--HRCHSCALPLPALVSL-CGNCLKQPPRLK 86 Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + Y L+ K+ L + + M Sbjct: 87 RCTAALDYAYPWQNLITRYKFQADLGLVRSLGRLMA 122 >gi|326796484|ref|YP_004314304.1| phosphoribosyltransferase [Marinomonas mediterranea MMB-1] gi|326547248|gb|ADZ92468.1| phosphoribosyltransferase [Marinomonas mediterranea MMB-1] Length = 243 Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 3/78 (3%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + + + LC C ++ P Sbjct: 22 QCYLCKQPSSS--SLCNWCLPLLN-TNQARCKGCGIAGKFPYLCGDCQSTTRPWKSCIVA 78 Query: 83 TLYCDMSCVLVRLLKYHD 100 T Y ++ L+R K+HD Sbjct: 79 TDYEKINRHLIRAAKFHD 96 >gi|146313458|ref|YP_001178532.1| gluconate periplasmic binding protein [Enterobacter sp. 638] gi|145320334|gb|ABP62481.1| putative competence protein [Enterobacter sp. 638] Length = 227 Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 14/85 (16%) Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 IC + +R N R C C ++ + +Q+ P + +V Sbjct: 22 ICSVCTRSFNTRHPCCPQC--------------GLPAMSMKMPCGRCLQQPPPWCALVAV 67 Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIM 107 Y L+ LK+ ++ LA Sbjct: 68 DDYVQPLSGLIHKLKFTGQSQLAWP 92 >gi|291456486|ref|ZP_06595876.1| putative phosphoribosyl transferase domain protein [Bifidobacterium breve DSM 20213] gi|291381763|gb|EFE89281.1| putative phosphoribosyl transferase domain protein [Bifidobacterium breve DSM 20213] Length = 224 Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 29/94 (30%) Query: 17 HCIYPSICPIYSRIINLRFCLCGHC------WSKIHFITATEHILKNNKDNIDKDPLKSM 70 ++P C R LCG C W ++ ++ ++ Sbjct: 4 DALFPRGCAGCDRP---DEVLCGDCRSLFANWRNRELVSG-------------QETQGAV 47 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104 S + Y + + K HD T+L Sbjct: 48 HT---W----SASTYQGVVRHAILAWKDHDDTEL 74 >gi|170699784|ref|ZP_02890817.1| phosphoribosyltransferase [Burkholderia ambifaria IOP40-10] gi|170135311|gb|EDT03606.1| phosphoribosyltransferase [Burkholderia ambifaria IOP40-10] Length = 270 Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 29/114 (25%), Gaps = 22/114 (19%) Query: 21 PSICPIYSRIINLRFCLCGHC----WSKIHF---------------ITATEHILKNNKDN 61 P+ C + + +C C W++ A + Sbjct: 30 PNRCALCGNL--SHAVICSACDAAYWNEARLRCDVCAVPLGIGRPRPRAARGRHTGAAAS 87 Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL-AIMMAQWMFR 114 P ++ Y L R LK+H R L A A+ R Sbjct: 88 FAYRCDACRATPPPFDATLALADYRAPLDGLARGLKFHARLALGAEFAARLAQR 141 >gi|264680076|ref|YP_003279985.1| hypothetical protein CtCNB1_3943 [Comamonas testosteroni CNB-2] gi|262210591|gb|ACY34689.1| conserved hypothetical protein [Comamonas testosteroni CNB-2] Length = 254 Score = 34.5 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 8/96 (8%) Query: 21 PSICPIYSRIINLRFCLCGHC---WSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77 PS C I R R +C C W++ + +++ L Sbjct: 32 PSQCAICGRWPGPR--ICRDCHARWAQHK--HRCHSCALPLPALVSL-CGNCLKQPPRLK 86 Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + + Y L+ K+ L + + M Sbjct: 87 RCTAALDYAYPWQNLITRYKFQADLGLVRSLGRLMA 122 >gi|163847407|ref|YP_001635451.1| amidophosphoribosyltransferase-like protein [Chloroflexus aurantiacus J-10-fl] gi|222525256|ref|YP_002569727.1| amidophosphoribosyltransferase-like protein [Chloroflexus sp. Y-400-fl] gi|163668696|gb|ABY35062.1| amidophosphoribosyltransferase-like protein [Chloroflexus aurantiacus J-10-fl] gi|222449135|gb|ACM53401.1| amidophosphoribosyltransferase-like protein [Chloroflexus sp. Y-400-fl] Length = 218 Score = 34.1 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 23/98 (23%), Gaps = 21/98 (21%) Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63 + ++ + + ++P C ++ F C C ++ Sbjct: 1 MYHATPAMFNRVLNWLFPDRCAGCRQLTGDLF--CAACRKRLR---------------PF 43 Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101 D Y + LKY R Sbjct: 44 PPFPPPAGLDRAWV----AFRYEGALVSAIHQLKYGRR 77 >gi|227494985|ref|ZP_03925301.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] gi|226831437|gb|EEH63820.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436] Length = 240 Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 22/99 (22%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSK-IHFITATEHILKNNKDNIDKDPLKSM 70 + E ++P+ C + LC C++ I + L Sbjct: 7 VNEFLDLLFPTQCVVCGEWGQ---GLCLRCFAGSISGLRRFRFALDAGG----------- 52 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR-TDLAIMM 108 S+ Y L+ K+ DR D +I + Sbjct: 53 -----FLPGLSLGSYVGDLRSLILSAKH-DRVLDFSIWL 85 >gi|308094559|ref|ZP_05890176.2| ComF family protein [Vibrio parahaemolyticus AN-5034] gi|308089775|gb|EFO39470.1| ComF family protein [Vibrio parahaemolyticus AN-5034] Length = 232 Score = 34.1 bits (77), Expect = 7.2, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 16/105 (15%) Query: 23 ICPIYS---RIINLRFCL--CGHCWSKIHFI---TATEHILKNNKDNIDKDPLKSMQKDL 74 C + + L C HC+ + + LK + NI+ + + + Sbjct: 8 QCGLCRFPIQATAQPNALRWCDHCYQYLTPVKRCQRCGLSLKAEEANIESICGECLSEPP 67 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119 P ++ ++ Y V+ K H +T W R L ++ Sbjct: 68 PWQRLFTLGDYDFPLSREVQRFKDHGQT--------WHVRALTQL 104 >gi|303248558|ref|ZP_07334815.1| phosphoribosyltransferase [Desulfovibrio fructosovorans JJ] gi|302490088|gb|EFL50009.1| phosphoribosyltransferase [Desulfovibrio fructosovorans JJ] Length = 255 Score = 34.1 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 12/82 (14%) Query: 22 SICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 +CP+ + R+ C C L + + + +++ Sbjct: 41 PVCPLCAARLTPRLGGYCPRC-----------GELAADPAAPPQLCPECLRQGRSWDGFA 89 Query: 81 SVTLYCDMSCVLVRLLKYHDRT 102 Y + +V K+H R Sbjct: 90 FHGPYEGLLRDMVLGFKFHGRL 111 >gi|218889229|ref|YP_002438093.1| putative phosphoribosyl transferase [Pseudomonas aeruginosa LESB58] gi|218769452|emb|CAW25212.1| probable phosphoribosyl transferase [Pseudomonas aeruginosa LESB58] Length = 241 Score = 34.1 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 6/94 (6%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65 ++ + L P C + + + LC C + + + + + +D Sbjct: 5 LRPLTRWLLP---PPACLLCAARSDQPPRPLCRACAADLPW-SRQQCRRCALPLPLDGQV 60 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + +++ Q + Y L+ K+ Sbjct: 61 CGECLRRPPAYEQAIAPWRYAFPLDSLINRFKHQ 94 >gi|302834455|ref|XP_002948790.1| hypothetical protein VOLCADRAFT_58546 [Volvox carteri f. nagariensis] gi|300265981|gb|EFJ50170.1| hypothetical protein VOLCADRAFT_58546 [Volvox carteri f. nagariensis] Length = 115 Score = 33.7 bits (76), Expect = 7.5, Method: Composition-based stats. Identities = 6/24 (25%), Positives = 9/24 (37%) Query: 22 SICPIYSRIINLRFCLCGHCWSKI 45 + CP R + F C C + Sbjct: 90 ASCPGCGRHVQPDFAFCPSCGRSL 113 >gi|311896499|dbj|BAJ28907.1| hypothetical protein KSE_30970 [Kitasatospora setae KM-6054] Length = 528 Score = 33.7 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 13/59 (22%), Gaps = 9/59 (15%) Query: 22 SICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80 ICP C +C D I+ D + P R Sbjct: 2 PICPSCGAASPDPAATCANC--------GRPVAAPAIGDVIE-DAGSAAAGPSPWGAGR 51 >gi|146309104|ref|YP_001189569.1| amidophosphoribosyltransferase-like protein [Pseudomonas mendocina ymp] gi|145577305|gb|ABP86837.1| amidophosphoribosyltransferase-like protein [Pseudomonas mendocina ymp] Length = 246 Score = 33.7 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 8/77 (10%), Positives = 21/77 (27%), Gaps = 1/77 (1%) Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82 C + + +C C + + ++ A + K ++ + Sbjct: 21 CQLCDEASDHAELSICSACQADLPWLGAHCQVCAVPLPAQGMICGACQNKPPSFARVEAP 80 Query: 83 TLYCDMSCVLVRLLKYH 99 Y L+ K+ Sbjct: 81 WRYAFPVDNLITRFKHQ 97 >gi|225568551|ref|ZP_03777576.1| hypothetical protein CLOHYLEM_04628 [Clostridium hylemonae DSM 15053] gi|225162779|gb|EEG75398.1| hypothetical protein CLOHYLEM_04628 [Clostridium hylemonae DSM 15053] Length = 235 Score = 33.7 bits (76), Expect = 7.8, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 30/103 (29%), Gaps = 6/103 (5%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT--ATEH--ILKNNKDNIDKDPLKSM 70 + +P CP + ++ C C + + K + D+ Sbjct: 6 VLKLFWPETCPFCGK-VHREGA-CPACLPAVKRLELKGPRCMQCGKPVRRTEDEYCRDCA 63 Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113 + S+ L+ + KY ++ + A+ M Sbjct: 64 HTYHHYDRGSSIWLHKPPVSTSIYRFKYQNQRNYGSYYAEKMA 106 >gi|292669322|ref|ZP_06602748.1| NADH dehydrogenase I subunit E [Selenomonas noxia ATCC 43541] gi|292649163|gb|EFF67135.1| NADH dehydrogenase I subunit E [Selenomonas noxia ATCC 43541] Length = 95 Score = 33.7 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 16/52 (30%), Gaps = 3/52 (5%) Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLP 75 CP + + C +C I I+ + + D +S P Sbjct: 6 CPKCDKFVPSSATACPNC--GIPIISGFSPNY-GSGFALGGDDTESRNDAPP 54 >gi|307718808|ref|YP_003874340.1| hypothetical protein STHERM_c11220 [Spirochaeta thermophila DSM 6192] gi|306532533|gb|ADN02067.1| hypothetical protein STHERM_c11220 [Spirochaeta thermophila DSM 6192] Length = 236 Score = 33.7 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 26/92 (28%), Gaps = 6/92 (6%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCL---CGHCWSKIHFITATEHILKNNK-DNIDKDPL 67 + + P C + I L C C + + I + Sbjct: 6 FEAILDLLAPLHCQVCGTFIPRPHPLHPLCPRCLAGLIPILPPRCPRCSQPLPTPASPCP 65 Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + + + +++ LY L+ K+H Sbjct: 66 RCI--PPSVDALQAPFLYHHTIPRLLLAYKHH 95 >gi|254243583|ref|ZP_04936905.1| hypothetical protein PA2G_04406 [Pseudomonas aeruginosa 2192] gi|126196961|gb|EAZ61024.1| hypothetical protein PA2G_04406 [Pseudomonas aeruginosa 2192] Length = 241 Score = 33.7 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 6/94 (6%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65 ++ + L P C + + + LC C + + + + + +D Sbjct: 5 LRPLTRWLLP---PPACLLCAARSDQPPRPLCRACAADLPW-SRQQCRRCALPLPLDGQV 60 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + +++ Q + Y L+ K+ Sbjct: 61 CGECLRRPPAYEQAIAPWRYAFPLDSLINRFKHQ 94 >gi|193211907|ref|YP_001997860.1| phosphoribosyltransferase [Chlorobaculum parvum NCIB 8327] gi|193085384|gb|ACF10660.1| phosphoribosyltransferase [Chlorobaculum parvum NCIB 8327] Length = 262 Score = 33.7 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 13/112 (11%) Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDK- 64 T+ + L H ++P +C + + + LC C + + L + I Sbjct: 25 TLARPLEGLTHLLFPQVCVVCRKTLTAPEQQLCSACLTDFA---PFPNPLAGGQAVIRSV 81 Query: 65 ----DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112 L RS + +KY L + +W+ Sbjct: 82 NSHFGLGAIPSAAWSLYPYRS----NGALHDALHAMKYEGLFPLGRLFGRWL 129 >gi|296168962|ref|ZP_06850631.1| purine/pyrimidine phosphoribosyl transferase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896431|gb|EFG76084.1| purine/pyrimidine phosphoribosyl transferase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 108 Score = 33.7 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 24/96 (25%), Gaps = 17/96 (17%) Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74 + + P C C C ++ H++ D + Sbjct: 1 MLDLVLPLQCGGCGEPSTRW---CAACARELWVAADQPHVVNPRVD----------PRVP 47 Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110 R Y + LK H R DL +A Sbjct: 48 VFALGR----YAGARRRAILALKEHGRADLVGPLAG 79 >gi|149174134|ref|ZP_01852762.1| Phosphoribosyltransferase [Planctomyces maris DSM 8797] gi|148847114|gb|EDL61449.1| Phosphoribosyltransferase [Planctomyces maris DSM 8797] Length = 252 Score = 33.7 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 8/83 (9%), Positives = 19/83 (22%), Gaps = 4/83 (4%) Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSMQKDL 74 +YP C + CG ++ + + + Sbjct: 24 LYPPRCSLCGMETVCTGVNCGEQIEELVPVLSRSCQRCGAPVGPHLETSGGCTDCRGEKF 83 Query: 75 PLTQIRSVTLYCDMSCVLVRLLK 97 + ++ Y + LK Sbjct: 84 RFARAVALGKYEGALQEFILNLK 106 >gi|188591075|ref|YP_001795675.1| amidophosphoribosyltransferase, comf/gntx family [Cupriavidus taiwanensis LMG 19424] gi|170937969|emb|CAP62953.1| putative amidophosphoribosyltransferase, comF/gntX family [Cupriavidus taiwanensis LMG 19424] Length = 285 Score = 33.7 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 22/88 (25%), Gaps = 3/88 (3%) Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71 + + PS C + R +C C + + + + Sbjct: 56 LSRAREQLLPSACVLCG--TVQRHVVCTPCAADLLRPVRR-CTVCALALGRHRHCPACAA 112 Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 ++ Y LV LK+ Sbjct: 113 SPRAFDHAHTLGDYAAPQDQLVLALKFG 140 >gi|116054218|ref|YP_788662.1| putative phosphoribosyl transferase [Pseudomonas aeruginosa UCBPP-PA14] gi|296386989|ref|ZP_06876488.1| putative phosphoribosyl transferase [Pseudomonas aeruginosa PAb1] gi|115589439|gb|ABJ15454.1| putative phosphoribosyltransferase [Pseudomonas aeruginosa UCBPP-PA14] Length = 241 Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 6/94 (6%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65 ++ + L P C + + + LC C + + + + + +D Sbjct: 5 LRPLTRWLLP---PPACLLCAARSDQPPRPLCRACAADLPW-SRQQCRRCALPLPLDGQV 60 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + +++ Q + Y L+ K+ Sbjct: 61 CGECLRRPPAYEQAIAPWRYAFPLDSLINRFKHQ 94 >gi|291619242|ref|YP_003521984.1| GntX [Pantoea ananatis LMG 20103] gi|291154272|gb|ADD78856.1| GntX [Pantoea ananatis LMG 20103] gi|327395571|dbj|BAK12993.1| protein GntX [Pantoea ananatis AJ13355] Length = 233 Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 1/79 (1%) Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 P++C + + LC C ++ + + + + + + P + Sbjct: 12 PALCWLCQLPLRIALHGLCSICLRQLPRLPSLCPCCGLPAASDALPCGRCLLRPPPWQAL 71 Query: 80 RSVTLYCDMSCVLVRLLKY 98 V+ Y V LK+ Sbjct: 72 ICVSHYQPPLSTWVNQLKF 90 >gi|116671255|ref|YP_832188.1| phosphoribosyltransferase [Arthrobacter sp. FB24] gi|116611364|gb|ABK04088.1| phosphoribosyltransferase [Arthrobacter sp. FB24] Length = 308 Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 27/91 (29%), Gaps = 10/91 (10%) Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72 EL P C + F LCGHC + +T T + + + Sbjct: 39 RELLALAAPVECVCCG---SEDFSLCGHCERALRLLTRTPFRAEGQAPALMDVNGSVI-- 93 Query: 73 DLPLTQIRSVTLYCDMSCVLVRLL-KYHDRT 102 + + +Y + V KY R Sbjct: 94 ----LPVVAAGVYREELAQAVLSFKKYGQRQ 120 >gi|15595686|ref|NP_249180.1| phosphoribosyl transferase [Pseudomonas aeruginosa PAO1] gi|9946352|gb|AAG03878.1|AE004486_7 probable phosphoribosyl transferase [Pseudomonas aeruginosa PAO1] Length = 241 Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 6/94 (6%) Query: 8 VKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65 ++ + L P C + + + LC C + + + + + +D Sbjct: 5 LRPLTRWLLP---PPACLLCAARSDQPPRPLCRACAADLPW-SRQQCRRCALPLPLDGQV 60 Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99 + +++ Q + Y L+ K+ Sbjct: 61 CGECLRRPPAYEQAIAPWRYAFPLDSLINRFKHQ 94 >gi|188535340|ref|YP_001909137.1| Predicted amidophosphoribosyltransferase GntX [Erwinia tasmaniensis Et1/99] gi|188030382|emb|CAO98273.1| Predicted amidophosphoribosyltransferase GntX [Erwinia tasmaniensis Et1/99] Length = 237 Score = 33.4 bits (75), Expect = 10.0, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%) Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79 P+ C + + + LC C + +A D + +++ P ++ Sbjct: 15 PAGCWLCAMPLAFAIHGLCNVCLRLLLVRSACCARCGLPSYAAAYDCGRCLRRPPPWQRL 74 Query: 80 RSVTLYCDMSCVLVRLLKY 98 +V+ + LV LK+ Sbjct: 75 IAVSPWQPPLSQLVNRLKF 93 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.311 0.148 0.525 Lambda K H 0.267 0.0454 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,407,220,798 Number of Sequences: 14124377 Number of extensions: 94938954 Number of successful extensions: 363846 Number of sequences better than 10.0: 1163 Number of HSP's better than 10.0 without gapping: 635 Number of HSP's successfully gapped in prelim test: 646 Number of HSP's that attempted gapping in prelim test: 361937 Number of HSP's gapped (non-prelim): 1435 length of query: 119 length of database: 4,842,793,630 effective HSP length: 86 effective length of query: 33 effective length of database: 3,628,097,208 effective search space: 119727207864 effective search space used: 119727207864 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.7 bits) S2: 76 (33.7 bits)