BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780310|ref|YP_003064723.1| hypothetical protein
CLIBASIA_00975 [Candidatus Liberibacter asiaticus str. psy62]
(119 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780310|ref|YP_003064723.1| hypothetical protein CLIBASIA_00975 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039987|gb|ACT56783.1| hypothetical protein CLIBASIA_00975 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 119
Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD
Sbjct: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI
Sbjct: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
>gi|315122266|ref|YP_004062755.1| competence protein F, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495668|gb|ADR52267.1| competence protein F, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 214
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 73/90 (81%)
Query: 30 IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89
+I+ RFCLC CWSKI+FI++ L+N + I++ PL+ +++DL L IRSV +YCD+S
Sbjct: 1 MIDRRFCLCAFCWSKINFISSATQNLENIDNIINEKPLELLRQDLRLIPIRSVVVYCDIS 60
Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
CVLVRLLKYHDRTDLAIMMAQWMFRV +++
Sbjct: 61 CVLVRLLKYHDRTDLAIMMAQWMFRVGKEL 90
>gi|86136799|ref|ZP_01055377.1| competence protein F, putative [Roseobacter sp. MED193]
gi|85826123|gb|EAQ46320.1| competence protein F, putative [Roseobacter sp. MED193]
Length = 242
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73
+YP C + F LCG CW + HFI+ T L ++D D + M
Sbjct: 13 VYPPKCLGCDEFVEQDFGLCGGCWGEAHFISGTVCEGCGVPLPGDEDGYRLDCDECMSMS 72
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P +Q R+ LY D + LV LK+ DRTDLA A W+ R
Sbjct: 73 RPWSQGRAAMLYKDKARNLVMALKHGDRTDLAAPAAGWIERA 114
>gi|126738463|ref|ZP_01754168.1| competence protein F, putative [Roseobacter sp. SK209-2-6]
gi|126720262|gb|EBA16968.1| competence protein F, putative [Roseobacter sp. SK209-2-6]
Length = 242
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73
IYP C ++ F LCG CW + HFI+ T L D + + M
Sbjct: 13 IYPPRCLGCDELVEQDFGLCGTCWGQTHFISGTVCEGCGIPLPGEGDGYHLECDECMSTP 72
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P +Q R+ LY D + LV LK+ DRTDLA A W+ R
Sbjct: 73 RPWSQGRAAMLYKDKARSLVMALKHGDRTDLAAPAAHWIERA 114
>gi|90420200|ref|ZP_01228108.1| competence protein F [Aurantimonas manganoxydans SI85-9A1]
gi|90335534|gb|EAS49284.1| competence protein F [Aurantimonas manganoxydans SI85-9A1]
Length = 249
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPL 67
+I + ++P +CP + +C CW K+ FI E + ++ K L
Sbjct: 10 AITGSIGRLLFPPVCPGCQAAVTGSGTVCCACWPKLRFIERPYCEVLGLPFAYDLGKGFL 69
Query: 68 --KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++ + P ++R+ LY D++ LV LKY DRTDL +MA WM R ++
Sbjct: 70 SAEAIAEPPPFARLRAAVLYEDLAARLVSSLKYADRTDLVPLMAGWMTRAGAEL 123
>gi|304394136|ref|ZP_07376059.1| competence protein F [Ahrensia sp. R2A130]
gi|303293576|gb|EFL87953.1| competence protein F [Ahrensia sp. R2A130]
Length = 273
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKD 73
I+P++C R ++ + LC CW ++ FI + + D +++
Sbjct: 36 AIWPAVCLACERPVDKQGSLCPTCWGEMRFIERPYCAVMGSPFTYDLGEGALSAEAIADP 95
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + RSV LY D++ +V LK+ DRT+LA MAQWM R + +
Sbjct: 96 PPFDRCRSVVLYDDVARRMVSSLKFSDRTELAPWMAQWMVRASDGM 141
>gi|319781332|ref|YP_004140808.1| phosphoribosyltransferase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167220|gb|ADV10758.1| phosphoribosyltransferase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 266
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 20/125 (16%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA----------TE 52
I +S++ ++P +C R ++ LCG CW K+ + T
Sbjct: 12 GITNLARSVVGWPARMLFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTH 71
Query: 53 HILKN--NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
H+ + + + I P P + R+ Y ++ +V+ LKY DRTDLA MA+
Sbjct: 72 HMGEGFLSAEAIADPP--------PFERARAAVAYSGVARQMVQGLKYQDRTDLAPWMAR 123
Query: 111 WMFRV 115
WM R
Sbjct: 124 WMMRA 128
>gi|159185776|ref|NP_357098.2| competence protein F [Agrobacterium tumefaciens str. C58]
gi|159140910|gb|AAK89883.2| competence protein F [Agrobacterium tumefaciens str. C58]
Length = 263
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 18/126 (14%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-----------ATE 52
+ +++ F +YP C +R+ LC CW + FI A +
Sbjct: 18 VPSAARAVARSFFRLVYPPTCAGCNRMTGGEGALCPDCWRDVAFIDRPFCEVLGIPFARD 77
Query: 53 HILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
H DP P ++RSV + + LV LKY DRTDLA ++A WM
Sbjct: 78 HGEGVVSGRAIADPP-------PFDRLRSVASHEGTARKLVHRLKYQDRTDLARLIALWM 130
Query: 113 FRVLEK 118
R +
Sbjct: 131 LRASDG 136
>gi|163867840|ref|YP_001609044.1| competence protein ComF [Bartonella tribocorum CIP 105476]
gi|161017491|emb|CAK01049.1| competence protein ComF [Bartonella tribocorum CIP 105476]
Length = 261
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 10 SIIIELFHC-IYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDN 61
S IE F +YP ICP + ++ +C CW + FIT T +
Sbjct: 16 SQFIERFKTMLYPPICPGCKQNVSTYGTICSECWKDLQFITKPYCPVMGTPFVCDMGDGF 75
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ + L+S P +++RSV ++ ++ LV LKY D +LA MA WM
Sbjct: 76 LSGEALRS---SYPFSRVRSVIVHKGLARTLVTRLKYGDHIELASFMANWM 123
>gi|254464782|ref|ZP_05078193.1| competence protein F [Rhodobacterales bacterium Y4I]
gi|206685690|gb|EDZ46172.1| competence protein F [Rhodobacterales bacterium Y4I]
Length = 242
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKN 57
A IQT S+I YP C ++ F LCG CWS + FI+ T L
Sbjct: 4 AGIQTAVSLI-------YPPQCMGCGGLVGSDFGLCGTCWSGMSFISGTVCEGCGVPLPG 56
Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
D + ++ P +Q RS +Y LV LK+ DRT++A A W+ R +
Sbjct: 57 EADGFRLECDSCLRHPRPWSQGRSALIYEGQGRKLVLALKHGDRTEIAQTAAVWLERAAQ 116
Query: 118 KI 119
+
Sbjct: 117 PM 118
>gi|49475199|ref|YP_033240.1| competence protein comF [Bartonella henselae str. Houston-1]
gi|49238004|emb|CAF27209.1| Competence protein comF [Bartonella henselae str. Houston-1]
Length = 262
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDP 66
L +YP ICP + ++ +C CW + FIT + + +
Sbjct: 22 RLLTILYPPICPGCKQRVSAYGTICSECWKDLQFITKPYCPVMGVPFVYDMGDGFLSGE- 80
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++Q LP +++RSV ++ ++ LV LKY D +LA MA WM +I
Sbjct: 81 --ALQNSLPFSRVRSVIVHKGVAQSLVTRLKYGDHVELASFMANWMVSAGREI 131
>gi|13472985|ref|NP_104552.1| hypothetical protein mll3453 [Mesorhizobium loti MAFF303099]
gi|14023733|dbj|BAB50338.1| mll3453 [Mesorhizobium loti MAFF303099]
Length = 240
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITA----------TEHILKN--NKDNIDKDP 66
++P +C R ++ LCG CW K+ + T H+ + + + I P
Sbjct: 2 LFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTHHMGEGFLSAEAIADPP 61
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P + R+ Y ++ +V+ LKY DRTDLA MA+WM R
Sbjct: 62 --------PFERARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMVRA 102
>gi|260467149|ref|ZP_05813327.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259029073|gb|EEW30371.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 266
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHF-------ITATEHILKNNKDNIDKDPLKSMQ 71
++P +C R ++ LCG CW K+ + T + + + + ++
Sbjct: 28 LFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTHQMGEGFLSAE---AIA 84
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P + R+ Y ++ +V+ LKY DRTDLA MA+WM R
Sbjct: 85 DPPPFDRARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMVRA 128
>gi|126730067|ref|ZP_01745879.1| Competence protein F [Sagittula stellata E-37]
gi|126709447|gb|EBA08501.1| Competence protein F [Sagittula stellata E-37]
Length = 237
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATE-----HILKNNKDNIDK-DPLK 68
L +YP C ++ F LCG CW + FIT L ++ D
Sbjct: 4 LVQLVYPPRCLSCGGLVETDFGLCGACWRETRFITGLACDVCGAPLPGESGTVEHCDDCL 63
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
++ + P R+ +Y D+ LV LK+ DR D+A A+WM RV
Sbjct: 64 TLAR--PWVGGRAALVYADVGRRLVLALKHGDRQDIAAPAAEWMARV 108
>gi|319407556|emb|CBI81206.1| competence protein ComF [Bartonella sp. 1-1C]
Length = 247
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKD 60
+ +I L +YP C ++I++ +C CW + FIT T +
Sbjct: 1 MNKLIKRLIKILYPPTCHGCAKIVSAYGTICSDCWQDLQFITKPYCPVMGTPFAYDMGEG 60
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ + ++Q P + +RS ++ ++ VL LKY DR +LA MA WM
Sbjct: 61 FLSGE---AIQNPPPFSSLRSAVVHKGLARVLTTRLKYGDRLELAPFMANWM 109
>gi|319404563|emb|CBI78169.1| competence protein ComF [Bartonella rochalimae ATCC BAA-1498]
Length = 247
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNID 63
+I L +YP C ++I++ +C CW + FIT T + +
Sbjct: 4 LIKRLIKILYPPTCHGCAKIVSAYGTICSDCWKDLQFITKPYCPVMGTPFAYDMGEGFLS 63
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ ++Q P + +RS ++ ++ VL LKY DR +LA MA WM
Sbjct: 64 GE---AIQNPPPFSSLRSAVVHKGLARVLTTRLKYGDRLELAPFMANWM 109
>gi|227823196|ref|YP_002827168.1| putative competence protein F [Sinorhizobium fredii NGR234]
gi|227342197|gb|ACP26415.1| putative competence protein F [Sinorhizobium fredii NGR234]
Length = 281
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSMQKDL 74
++P +C R+ +C CW+ + I + + D P +++
Sbjct: 51 VFPPVCCGCGRLTGDAHAVCPSCWAGLRLIERPYCEILGSPFAFDPGPGAVSPQAIANPP 110
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
++RS +L+ ++ LV LKY DRTDLA MMA+WM R
Sbjct: 111 DFDRLRSASLHEGIARDLVHGLKYRDRTDLAPMMAEWMIRA 151
>gi|114704317|ref|ZP_01437225.1| hypothetical protein FP2506_05271 [Fulvimarina pelagi HTCC2506]
gi|114539102|gb|EAU42222.1| hypothetical protein FP2506_05271 [Fulvimarina pelagi HTCC2506]
Length = 249
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 24/115 (20%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFIT--------------ATEHILKNNKDNIDK 64
++P IC I LC CWS++ FI E ++
Sbjct: 19 LFPPICTSCGIGIGKPAGLCSSCWSELRFIERPFCDILCLPFSYDPGEGVVS-------- 70
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
K++ P ++RSV LY D + LV LKY DR DL +MA WM R I
Sbjct: 71 --AKAIAHPPPFEKLRSVVLYDDRARRLVSALKYRDRLDLVPLMAAWMVRAGRDI 123
>gi|121601823|ref|YP_988686.1| comF family protein [Bartonella bacilliformis KC583]
gi|120614000|gb|ABM44601.1| comF family protein [Bartonella bacilliformis KC583]
Length = 251
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----P 66
I L +YP CP I++ +C CW + FIT + D
Sbjct: 8 FIKRLMAVVYPPTCPGCKVIVSAHGTICADCWKDLQFITKPYCPIMGIPFACDMGDGFLS 67
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+++Q P +++RS + ++ L LKY DR +LA MA WM
Sbjct: 68 GEALQTSYPFSRVRSAIAHKGLARTLTIRLKYGDRVELAQFMANWM 113
>gi|240850049|ref|YP_002971442.1| competence protein ComF [Bartonella grahamii as4aup]
gi|240267172|gb|ACS50760.1| competence protein ComF [Bartonella grahamii as4aup]
Length = 261
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQ 71
+YP ICP + ++ +C CW + FIT T + + + L++
Sbjct: 26 LYPPICPGCKQNVSTYGTICSECWKDLQFITKPYCPVMGTPFVCDMGDGFLSGEALRNSH 85
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
P +++RS ++ ++ LV LKY D +LA MA WM
Sbjct: 86 ---PFSRVRSAIVHKGLARALVTRLKYGDHIELASFMANWM 123
>gi|319408180|emb|CBI81833.1| competence protein ComF [Bartonella schoenbuchensis R1]
Length = 247
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----P 66
I L +YP CP +I++ +C CW FIT + D
Sbjct: 4 FIESLIKILYPPTCPGCKKIVSAYSTVCSDCWKDFQFITKPYCPVMGIPFAYDMGEGFLS 63
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+++Q P +++RSV ++ ++ +L LKY DR +LA M+ WM
Sbjct: 64 GEAIQASPPFSRVRSVVVHKGLARLLTIQLKYSDRLELARFMSNWM 109
>gi|255262559|ref|ZP_05341901.1| competence protein F [Thalassiobium sp. R2A62]
gi|255104894|gb|EET47568.1| competence protein F [Thalassiobium sp. R2A62]
Length = 239
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM------QK 72
+YP+ C ++ LCG CWS FIT D DP ++
Sbjct: 8 LYPTQCVSCDALVEGDTGLCGKCWSDTPFITGAVCGACGAPLIGDVDPEETAYCEACHAS 67
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P R+ TLY + LV LK+ DRTDL ++QWM R
Sbjct: 68 PRPWLHGRAATLYSGNARRLVLALKHGDRTDLVPALSQWMARA 110
>gi|15966372|ref|NP_386725.1| hypothetical protein SMc02444 [Sinorhizobium meliloti 1021]
gi|307313041|ref|ZP_07592668.1| phosphoribosyltransferase [Sinorhizobium meliloti BL225C]
gi|307321047|ref|ZP_07600453.1| phosphoribosyltransferase [Sinorhizobium meliloti AK83]
gi|15075643|emb|CAC47198.1| Putative competence protein F [Sinorhizobium meliloti 1021]
gi|306893322|gb|EFN24102.1| phosphoribosyltransferase [Sinorhizobium meliloti AK83]
gi|306899360|gb|EFN29994.1| phosphoribosyltransferase [Sinorhizobium meliloti BL225C]
Length = 248
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKD 60
++ I + I+P +C R+ +C CW+ + FI +
Sbjct: 7 LRRISAQAVDLIFPPVCSGCGRLTGYAHAVCASCWAGMPFIERPYCEVLGLPFAYDPGES 66
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + + + ++RSV ++ + LV LKY DRTDLA MMA+WM R
Sbjct: 67 AVSPEAIANPPV---FDRLRSVAIHEGIVRDLVHGLKYRDRTDLAPMMAEWMIRA 118
>gi|327193402|gb|EGE60302.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli CNPAF512]
Length = 258
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 42/109 (38%), Gaps = 20/109 (18%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT---------EHILKNN---KDNIDKDP 66
+YP C + LC CW+ I FI H L + I K P
Sbjct: 28 LYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHDLGAGILSAEAIAKPP 87
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P ++RS + LV LKY DRTDLA MMA WM R
Sbjct: 88 --------PFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 128
>gi|39933674|ref|NP_945950.1| phosphoribosyltransferase [Rhodopseudomonas palustris CGA009]
gi|192289031|ref|YP_001989636.1| phosphoribosyltransferase [Rhodopseudomonas palustris TIE-1]
gi|39647520|emb|CAE26041.1| possible competence protein F (COMF) [Rhodopseudomonas palustris
CGA009]
gi|192282780|gb|ACE99160.1| phosphoribosyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 271
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNI-DKDP-LKSMQK--DLPL-TQIRSVTLYCDMSCV 91
+C CWS++ FI A + K + D P + SMQ D P ++ R+ Y +++ V
Sbjct: 56 VCAQCWSQLSFI-APPYCEKLGIPFVYDPGPGMLSMQAIADPPAYSRARAAVRYDEVAKV 114
Query: 92 LVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
LV LK+HDRTDLA M +WM R + +
Sbjct: 115 LVHGLKFHDRTDLAPTMGRWMARAGQPL 142
>gi|218462813|ref|ZP_03502904.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli Kim 5]
Length = 169
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPL--KSMQKDL 74
+YP C + LC CWS I FI E + ++ L +++
Sbjct: 28 LYPPTCSVCGVSAGGHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAIANPP 87
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P ++RS + LV LKY DRTDLA MMA WM R
Sbjct: 88 PFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 128
>gi|316932065|ref|YP_004107047.1| phosphoribosyltransferase [Rhodopseudomonas palustris DX-1]
gi|315599779|gb|ADU42314.1| phosphoribosyltransferase [Rhodopseudomonas palustris DX-1]
Length = 271
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNI-DKDP-LKSMQK--DLPL-TQIRSVTLYCDMSCV 91
LC CWS++ FI A + K + D P + SMQ D P ++ R+ Y +++
Sbjct: 56 LCARCWSQLSFI-APPYCEKLGIPFVYDPGPGMLSMQAIADPPAYSRARAAVRYDEIAKA 114
Query: 92 LVRLLKYHDRTDLAIMMAQWMFRV 115
LV LK+HDRTDLA M +WM R
Sbjct: 115 LVHGLKFHDRTDLAPTMGRWMARA 138
>gi|260431723|ref|ZP_05785694.1| competence protein F [Silicibacter lacuscaerulensis ITI-1157]
gi|260415551|gb|EEX08810.1| competence protein F [Silicibacter lacuscaerulensis ITI-1157]
Length = 254
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73
+YP C + F LCG CW + FI L D + M++
Sbjct: 24 VYPPRCIGCGELTESDFGLCGPCWRETPFIGGLVCASCGVPLPGEDDGHRIECDDCMRQP 83
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P ++ R LY + LV K+ DRT+LA A+WM R + +
Sbjct: 84 PPWSEGRGALLYKGKARALVLAFKHGDRTELARPAARWMARAGQSL 129
>gi|319899208|ref|YP_004159301.1| competence protein ComF [Bartonella clarridgeiae 73]
gi|319403172|emb|CBI76731.1| competence protein ComF [Bartonella clarridgeiae 73]
Length = 247
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNID 63
+I L +YP IC ++I++ +C CW + FIT T + +
Sbjct: 4 LIKRLITILYPPICHGCAKIVSAYGTICSDCWKDLQFITKPYCPVMGTPFAYDMGEGFLS 63
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ ++Q P + +RS ++ ++ LV LKY DR +LA MA M
Sbjct: 64 GE---AIQNSPPFSSLRSAVVHKGLARTLVTRLKYGDRLELASFMANSM 109
>gi|86359347|ref|YP_471239.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli CFN 42]
gi|86283449|gb|ABC92512.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli CFN 42]
Length = 258
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 20/109 (18%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT---------EHILKNN---KDNIDKDP 66
+YP C + LC CWS I FI H L + I P
Sbjct: 28 LYPPACSVCGISTGGHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAIANPP 87
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P ++RS + LV LKY DRTDLA MMA WM R
Sbjct: 88 --------PFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 128
>gi|323139478|ref|ZP_08074526.1| phosphoribosyltransferase [Methylocystis sp. ATCC 49242]
gi|322395280|gb|EFX97833.1| phosphoribosyltransferase [Methylocystis sp. ATCC 49242]
Length = 254
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNN 58
+P + + + +++L +YP C + + + LC CWS I FI E +
Sbjct: 8 LPDLARRAGAALLDL---VYPPSCLVCRKAVAQNGALCAACWSDIAFIERPFCERLGTPF 64
Query: 59 KDNIDKDPLKSMQ--KDLPLT-QIRSVTLY-CDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ ++D+ L S + + P+ + R+V Y D + L LKY+DR +LA M +WM R
Sbjct: 65 ERDLDQPGLISPEAAANPPVFHRARAVARYDSDKARSLAHRLKYYDRLELAGPMGRWMAR 124
Query: 115 VLEKI 119
I
Sbjct: 125 AGADI 129
>gi|190893598|ref|YP_001980140.1| competence protein F (phosphoribosyltransferase) [Rhizobium etli
CIAT 652]
gi|190698877|gb|ACE92962.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli CIAT 652]
Length = 258
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 14/106 (13%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT---------EHILKNNKDNIDKDPLKS 69
+YP C + LC CW+ I FI H L + + +
Sbjct: 28 LYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHDLGAGIVSAE-----A 82
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ P ++RS + LV LKY DRTDLA MMA WM R
Sbjct: 83 IANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 128
>gi|75674583|ref|YP_317004.1| phosphoribosyltransferase [Nitrobacter winogradskyi Nb-255]
gi|74419453|gb|ABA03652.1| phosphoribosyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 271
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 37 LCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89
+C CW+K+ FI T + + + ++++ + R+ Y D++
Sbjct: 56 VCADCWTKLSFIERPYCPRLGTPFVYDPGSEMLS---MEAIANPPAYQRARAAVRYDDVA 112
Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRV 115
VLV LKY DRTDLA +M +WM R
Sbjct: 113 KVLVHALKYQDRTDLAPVMGRWMARA 138
>gi|92116101|ref|YP_575830.1| phosphoribosyltransferase [Nitrobacter hamburgensis X14]
gi|91798995|gb|ABE61370.1| phosphoribosyltransferase [Nitrobacter hamburgensis X14]
Length = 270
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 37 LCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89
+C CW+K+ FI T + + + ++++ + R+ Y D++
Sbjct: 55 VCADCWTKLSFIERPYCPRLGTPFVYDPGTNMLS---MEAIANPPAYQRARAAVRYDDVA 111
Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
VLV LKY DRTDLA M +WM R ++
Sbjct: 112 KVLVHALKYQDRTDLAPAMGRWMARAGTEL 141
>gi|49473949|ref|YP_031991.1| competence protein comF [Bartonella quintana str. Toulouse]
gi|49239452|emb|CAF25803.1| Competence protein comF [Bartonella quintana str. Toulouse]
Length = 261
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSM 70
L +YP ICP + ++ +C CW + FIT + D +++
Sbjct: 22 LLTILYPPICPGCKQKVSAYGAICSQCWKDLQFITKPYCPVMGIPFGCDMGDGFLSGEAL 81
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
Q P +++RS ++ ++ LV LKY D +L MA WM
Sbjct: 82 QNLPPFSRVRSAIVHKGVAQALVTRLKYGDHIELVSFMANWM 123
>gi|23502731|ref|NP_698858.1| competence protein F [Brucella suis 1330]
gi|254704895|ref|ZP_05166723.1| putative competence protein F [Brucella suis bv. 3 str. 686]
gi|261755589|ref|ZP_05999298.1| phosphoribosyltransferase [Brucella suis bv. 3 str. 686]
gi|23348747|gb|AAN30773.1| competence protein F, putative [Brucella suis 1330]
gi|261745342|gb|EEY33268.1| phosphoribosyltransferase [Brucella suis bv. 3 str. 686]
Length = 262
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52
A + ++ + ++P+ C I RI ++ LC CWS + FI T
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 53 HILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
H ++ + + ++ P ++RS L+ + + LK+HDRTDLA MA+WM
Sbjct: 77 HDFGDHFLSAE-----AIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWM 131
Query: 113 FRVLEKI 119
R ++
Sbjct: 132 QRAGREL 138
>gi|161619796|ref|YP_001593683.1| protein gntX [Brucella canis ATCC 23365]
gi|260567631|ref|ZP_05838101.1| competence protein F [Brucella suis bv. 4 str. 40]
gi|161336607|gb|ABX62912.1| Protein gntX [Brucella canis ATCC 23365]
gi|260157149|gb|EEW92229.1| competence protein F [Brucella suis bv. 4 str. 40]
Length = 262
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52
A + ++ + ++P+ C I RI ++ LC CWS + FI T
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 53 HILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
H ++ + + ++ P ++RS L+ + + LK+HDRTDLA MA+WM
Sbjct: 77 HDFGDHFLSAE-----AIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWM 131
Query: 113 FRVLEKI 119
R ++
Sbjct: 132 QRAGREL 138
>gi|209551108|ref|YP_002283025.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209536864|gb|ACI56799.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 258
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPL--KSMQKDL 74
+YP C + +C CWS I FI E + ++ L +++
Sbjct: 28 LYPPACSVCGISTGGHRGVCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAIANPP 87
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P ++RS + LV LKY DRTDLA MMA WM R
Sbjct: 88 PFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAAWMLRA 128
>gi|254700524|ref|ZP_05162352.1| putative competence protein F [Brucella suis bv. 5 str. 513]
gi|261751028|ref|ZP_05994737.1| phosphoribosyltransferase [Brucella suis bv. 5 str. 513]
gi|261740781|gb|EEY28707.1| phosphoribosyltransferase [Brucella suis bv. 5 str. 513]
Length = 262
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52
A + ++ + ++P+ C I RI ++ LC CWS + FI T
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
H + + + I P P ++RS L+ + + LK+HDRTDLA MA
Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128
Query: 110 QWMFRVLEKI 119
+WM R ++
Sbjct: 129 RWMQRAGREL 138
>gi|306842968|ref|ZP_07475602.1| competence protein F [Brucella sp. BO2]
gi|306286896|gb|EFM58421.1| competence protein F [Brucella sp. BO2]
Length = 262
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52
A + ++ + ++P+ C I RI ++ LC CWS + FI T
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
H + + + I P P ++RS L+ + + LK+HDRTDLA MA
Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128
Query: 110 QWMFRVLEKI 119
+WM R ++
Sbjct: 129 RWMQRAGREL 138
>gi|163843904|ref|YP_001628308.1| protein gntX [Brucella suis ATCC 23445]
gi|254707589|ref|ZP_05169417.1| putative competence protein F [Brucella pinnipedialis M163/99/10]
gi|254708873|ref|ZP_05170684.1| putative competence protein F [Brucella pinnipedialis B2/94]
gi|254713704|ref|ZP_05175515.1| putative competence protein F [Brucella ceti M644/93/1]
gi|254715946|ref|ZP_05177757.1| putative competence protein F [Brucella ceti M13/05/1]
gi|256030399|ref|ZP_05444013.1| putative competence protein F [Brucella pinnipedialis M292/94/1]
gi|256059857|ref|ZP_05450044.1| putative competence protein F [Brucella neotomae 5K33]
gi|256370278|ref|YP_003107789.1| competence protein F, putative [Brucella microti CCM 4915]
gi|261217709|ref|ZP_05931990.1| phosphoribosyltransferase [Brucella ceti M13/05/1]
gi|261315076|ref|ZP_05954273.1| phosphoribosyltransferase [Brucella pinnipedialis M163/99/10]
gi|261316366|ref|ZP_05955563.1| phosphoribosyltransferase [Brucella pinnipedialis B2/94]
gi|261321444|ref|ZP_05960641.1| phosphoribosyltransferase [Brucella ceti M644/93/1]
gi|261323827|ref|ZP_05963024.1| phosphoribosyltransferase [Brucella neotomae 5K33]
gi|265987438|ref|ZP_06099995.1| phosphoribosyltransferase [Brucella pinnipedialis M292/94/1]
gi|163674627|gb|ABY38738.1| Protein gntX [Brucella suis ATCC 23445]
gi|256000441|gb|ACU48840.1| competence protein F, putative [Brucella microti CCM 4915]
gi|260922798|gb|EEX89366.1| phosphoribosyltransferase [Brucella ceti M13/05/1]
gi|261294134|gb|EEX97630.1| phosphoribosyltransferase [Brucella ceti M644/93/1]
gi|261295589|gb|EEX99085.1| phosphoribosyltransferase [Brucella pinnipedialis B2/94]
gi|261299807|gb|EEY03304.1| phosphoribosyltransferase [Brucella neotomae 5K33]
gi|261304102|gb|EEY07599.1| phosphoribosyltransferase [Brucella pinnipedialis M163/99/10]
gi|264659635|gb|EEZ29896.1| phosphoribosyltransferase [Brucella pinnipedialis M292/94/1]
Length = 262
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52
A + ++ + ++P+ C I RI ++ LC CWS + FI T
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
H + + + I P P ++RS L+ + + LK+HDRTDLA MA
Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128
Query: 110 QWMFRVLEKI 119
+WM R ++
Sbjct: 129 RWMQRAGREL 138
>gi|256158382|ref|ZP_05456280.1| putative competence protein F [Brucella ceti M490/95/1]
gi|256253801|ref|ZP_05459337.1| putative competence protein F [Brucella ceti B1/94]
gi|260169308|ref|ZP_05756119.1| putative competence protein F [Brucella sp. F5/99]
gi|261220934|ref|ZP_05935215.1| phosphoribosyltransferase [Brucella ceti B1/94]
gi|261758821|ref|ZP_06002530.1| competence protein F [Brucella sp. F5/99]
gi|265996894|ref|ZP_06109451.1| phosphoribosyltransferase [Brucella ceti M490/95/1]
gi|260919518|gb|EEX86171.1| phosphoribosyltransferase [Brucella ceti B1/94]
gi|261738805|gb|EEY26801.1| competence protein F [Brucella sp. F5/99]
gi|262551362|gb|EEZ07352.1| phosphoribosyltransferase [Brucella ceti M490/95/1]
Length = 262
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52
A + ++ + ++P+ C I RI ++ LC CWS + FI T
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
H + + + I P P ++RS L+ + + LK+HDRTDLA MA
Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128
Query: 110 QWMFRVLEKI 119
+WM R ++
Sbjct: 129 RWMQRAGREL 138
>gi|148560259|ref|YP_001259705.1| putative competence protein F [Brucella ovis ATCC 25840]
gi|148371516|gb|ABQ61495.1| putative competence protein F [Brucella ovis ATCC 25840]
Length = 262
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60
A + ++ + ++P+ C I RI ++ LC CWS + FI +L
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 61 NIDKDPLKSMQK---DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ D S + P ++RS L+ + + LK+HDRTDLA MA+WM R
Sbjct: 77 HDFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 136
Query: 118 KI 119
++
Sbjct: 137 EL 138
>gi|306844850|ref|ZP_07477433.1| competence protein F [Brucella sp. BO1]
gi|306274782|gb|EFM56563.1| competence protein F [Brucella sp. BO1]
Length = 262
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFI---------TATE 52
A + ++ + ++P+ C I RI ++ LC CWS + FI T
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 53 HILKN---NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
H + + + I P P ++RS L+ + + LK+HDRTDLA MA
Sbjct: 77 HDFGDHFLSAEAIADPP--------PFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMA 128
Query: 110 QWMFRVLEKI 119
+WM R ++
Sbjct: 129 RWMQRAGREL 138
>gi|85713804|ref|ZP_01044794.1| phosphoribosyltransferase [Nitrobacter sp. Nb-311A]
gi|85699708|gb|EAQ37575.1| phosphoribosyltransferase [Nitrobacter sp. Nb-311A]
Length = 269
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 37 LCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89
+C CW+++ FI T + + + ++++ + R+ Y D++
Sbjct: 54 VCADCWTQLSFIERPYCPRLGTPFVYDPGSEMLS---MEAIANPPAYQRARAAVRYDDVA 110
Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
VLV LKY DRTDLA M +WM R ++
Sbjct: 111 KVLVHALKYQDRTDLAPAMGRWMARAGSEL 140
>gi|163737955|ref|ZP_02145371.1| competence protein F, putative [Phaeobacter gallaeciensis BS107]
gi|161388571|gb|EDQ12924.1| competence protein F, putative [Phaeobacter gallaeciensis BS107]
Length = 242
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 12/124 (9%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHIL 55
+ A IQT S+I YP C ++ F LCG CW FI+ T L
Sbjct: 2 LKARIQTAVSLI-------YPPRCLACGDWVDSDFGLCGPCWRDTPFISGTCCDGCGVAL 54
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
D + M P Q R+ Y + L+ LK+ DRT++A A+W+ R
Sbjct: 55 MGEGDGFRLECDDCMAHPRPWQQGRAALSYEGTARRLILALKHGDRTEIARPAARWLTRA 114
Query: 116 LEKI 119
+
Sbjct: 115 AATL 118
>gi|225628082|ref|ZP_03786117.1| protein gntX [Brucella ceti str. Cudo]
gi|225616907|gb|EEH13954.1| protein gntX [Brucella ceti str. Cudo]
Length = 290
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60
A + ++ + ++P+ C I RI ++ LC CWS + FI +L
Sbjct: 46 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 104
Query: 61 NIDKD---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R
Sbjct: 105 HDFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 164
Query: 118 KI 119
++
Sbjct: 165 EL 166
>gi|241206509|ref|YP_002977605.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240860399|gb|ACS58066.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 258
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATE------HILKNNKDNIDKDPLKSMQK 72
YP C + LC CWS I FI L + I +++
Sbjct: 28 FYPPACSVCGISTGGHRGLCAKCWSGIRFIERPYCEVLGIPFLHDLGAGILS--AEAIAN 85
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P ++RS + LV LKY DRTDLA MMA WM R
Sbjct: 86 PPPFDRLRSAATHDRAVRDLVHGLKYRDRTDLAPMMAAWMLRA 128
>gi|299132843|ref|ZP_07026038.1| phosphoribosyltransferase [Afipia sp. 1NLS2]
gi|298592980|gb|EFI53180.1| phosphoribosyltransferase [Afipia sp. 1NLS2]
Length = 266
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSMQKDLPLTQIRSVTLYCDMSCVL 92
LC CW+K+ FI D P ++++ + R+ Y D++ L
Sbjct: 51 LCPACWAKLSFIAPPYCARLGIPFVYDPGPGLLSMEAIAAPPAYHRARAAVRYDDVAGTL 110
Query: 93 VRLLKYHDRTDLAIMMAQWMFRVLEKI 119
V LKY DRTDLA M +WM R ++
Sbjct: 111 VHALKYQDRTDLAPAMGRWMARAGAEL 137
>gi|254717947|ref|ZP_05179758.1| protein gntX [Brucella sp. 83/13]
gi|265982890|ref|ZP_06095625.1| phosphoribosyltransferase [Brucella sp. 83/13]
gi|306838253|ref|ZP_07471103.1| competence protein F [Brucella sp. NF 2653]
gi|264661482|gb|EEZ31743.1| phosphoribosyltransferase [Brucella sp. 83/13]
gi|306406656|gb|EFM62885.1| competence protein F [Brucella sp. NF 2653]
Length = 262
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60
A + ++ + ++P+ C I RI ++ LC CWS + FI + +L
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERSYCPVLGTPFG 76
Query: 61 NIDKD---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ D +++ P ++RS L+ + + LK+HDRTDLA MA+WM
Sbjct: 77 HDFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWM 131
>gi|84684631|ref|ZP_01012532.1| competence protein F, putative [Maritimibacter alkaliphilus
HTCC2654]
gi|84667610|gb|EAQ14079.1| competence protein F, putative [Rhodobacterales bacterium HTCC2654]
Length = 238
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
L IYP+ C I+ LCG CW + F+T H+ +K + DL
Sbjct: 4 LLRAIYPAQCASCGEIVEGDGGLCGPCWRETRFVTG--HVC--DKCGVGLPGESDGHLDL 59
Query: 75 ---------PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P +Q R+ Y LV K+ DR D+A A+W+ R + +
Sbjct: 60 CDDCMTIARPWSQGRTALDYTGNGRRLVLAFKHADRPDIAEPAARWVARAAQPL 113
>gi|150397708|ref|YP_001328175.1| phosphoribosyltransferase [Sinorhizobium medicae WSM419]
gi|150029223|gb|ABR61340.1| phosphoribosyltransferase [Sinorhizobium medicae WSM419]
Length = 258
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQ 71
++P +C R+ +C CW+KI I + + + ++
Sbjct: 28 VFPPVCCGCGRLTGDARAVCPSCWAKIPLIERPYCEVLGMPFTFDPGEGAVSPE---AIA 84
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
++RS ++ + LV LKY DRTDLA MMA+WM R
Sbjct: 85 NPPVFDRLRSAAIHEGIVRDLVHGLKYRDRTDLAPMMAEWMIR 127
>gi|116254026|ref|YP_769864.1| hypothetical protein RL4290 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258674|emb|CAK09778.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 246
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPL 67
S + + F YP C + + LC CWS I FI E + ++ L
Sbjct: 10 SALADFF---YPPACSVCGISTGVHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGIL 66
Query: 68 KSMQKDLP--LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ P ++RS + LV LKY DRTDLA MMA WM R
Sbjct: 67 SAEAIANPPAFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAAWMLRA 116
>gi|326539594|gb|ADZ87809.1| competence protein F [Brucella melitensis M5-90]
Length = 251
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60
A + ++ + ++P+ C I RI ++ LC CWS + FI +L
Sbjct: 7 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 65
Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R
Sbjct: 66 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 125
Query: 118 KI 119
++
Sbjct: 126 EL 127
>gi|256112214|ref|ZP_05453135.1| competence protein F [Brucella melitensis bv. 3 str. Ether]
gi|265993642|ref|ZP_06106199.1| phosphoribosyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|262764623|gb|EEZ10544.1| phosphoribosyltransferase [Brucella melitensis bv. 3 str. Ether]
Length = 262
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60
A + ++ + ++P+ C I RI ++ LC CWS + FI +L
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R
Sbjct: 77 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 136
Query: 118 KI 119
++
Sbjct: 137 EL 138
>gi|62290737|ref|YP_222530.1| competence protein F [Brucella abortus bv. 1 str. 9-941]
gi|82700649|ref|YP_415223.1| competence protein F [Brucella melitensis biovar Abortus 2308]
gi|189024949|ref|YP_001935717.1| competence protein F [Brucella abortus S19]
gi|254690026|ref|ZP_05153280.1| putative competence protein F [Brucella abortus bv. 6 str. 870]
gi|254694515|ref|ZP_05156343.1| putative competence protein F [Brucella abortus bv. 3 str. Tulya]
gi|254696140|ref|ZP_05157968.1| putative competence protein F [Brucella abortus bv. 2 str. 86/8/59]
gi|254731058|ref|ZP_05189636.1| putative competence protein F [Brucella abortus bv. 4 str. 292]
gi|256258280|ref|ZP_05463816.1| putative competence protein F [Brucella abortus bv. 9 str. C68]
gi|260546000|ref|ZP_05821740.1| competence protein F [Brucella abortus NCTC 8038]
gi|260755561|ref|ZP_05867909.1| phosphoribosyltransferase [Brucella abortus bv. 6 str. 870]
gi|260758784|ref|ZP_05871132.1| phosphoribosyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760508|ref|ZP_05872851.1| phosphoribosyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884585|ref|ZP_05896199.1| phosphoribosyltransferase [Brucella abortus bv. 9 str. C68]
gi|261214832|ref|ZP_05929113.1| phosphoribosyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|297247124|ref|ZP_06930842.1| competence protein ComFC [Brucella abortus bv. 5 str. B3196]
gi|62196869|gb|AAX75169.1| competence protein F, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82616750|emb|CAJ11836.1| competence protein F [Brucella melitensis biovar Abortus 2308]
gi|189020521|gb|ACD73243.1| competence protein F [Brucella abortus S19]
gi|260096107|gb|EEW79983.1| competence protein F [Brucella abortus NCTC 8038]
gi|260669102|gb|EEX56042.1| phosphoribosyltransferase [Brucella abortus bv. 4 str. 292]
gi|260670940|gb|EEX57761.1| phosphoribosyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675669|gb|EEX62490.1| phosphoribosyltransferase [Brucella abortus bv. 6 str. 870]
gi|260874113|gb|EEX81182.1| phosphoribosyltransferase [Brucella abortus bv. 9 str. C68]
gi|260916439|gb|EEX83300.1| phosphoribosyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|297174293|gb|EFH33640.1| competence protein ComFC [Brucella abortus bv. 5 str. B3196]
Length = 262
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60
A + ++ + ++P+ C I RI ++ LC CWS + FI +L
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R
Sbjct: 77 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 136
Query: 118 KI 119
++
Sbjct: 137 EL 138
>gi|209883247|ref|YP_002287104.1| phosphoribosyltransferase [Oligotropha carboxidovorans OM5]
gi|209871443|gb|ACI91239.1| phosphoribosyltransferase [Oligotropha carboxidovorans OM5]
Length = 278
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSMQKDLPLTQIRSVTLYCDMSCVL 92
LC CWSK+ FI D P ++++ + R+ Y +++ L
Sbjct: 63 LCPACWSKLSFIAPPYCARLGIPFVYDPGPGVLSMEAIAAPPAYHRARAAVRYDEVAKTL 122
Query: 93 VRLLKYHDRTDLAIMMAQWMFRV 115
V LKY DRTDLA M +WM R
Sbjct: 123 VHALKYEDRTDLAPTMGRWMTRA 145
>gi|17986467|ref|NP_539101.1| competence protein F [Brucella melitensis bv. 1 str. 16M]
gi|225853317|ref|YP_002733550.1| competence protein F [Brucella melitensis ATCC 23457]
gi|256045489|ref|ZP_05448372.1| putative competence protein F [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263196|ref|ZP_05465728.1| competence protein F [Brucella melitensis bv. 2 str. 63/9]
gi|260562798|ref|ZP_05833284.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265991911|ref|ZP_06104468.1| phosphoribosyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|17982065|gb|AAL51365.1| competence protein f [Brucella melitensis bv. 1 str. 16M]
gi|225641682|gb|ACO01596.1| competence protein F [Brucella melitensis ATCC 23457]
gi|260152814|gb|EEW87906.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263002977|gb|EEZ15270.1| phosphoribosyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093118|gb|EEZ17253.1| competence protein F [Brucella melitensis bv. 2 str. 63/9]
gi|326409880|gb|ADZ66945.1| competence protein F [Brucella melitensis M28]
Length = 262
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60
A + ++ + ++P+ C I RI ++ LC CWS + FI +L
Sbjct: 18 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 76
Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R
Sbjct: 77 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 136
Query: 118 KI 119
++
Sbjct: 137 EL 138
>gi|237816244|ref|ZP_04595237.1| competence protein F [Brucella abortus str. 2308 A]
gi|237788311|gb|EEP62526.1| competence protein F [Brucella abortus str. 2308 A]
Length = 290
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATE-HILKNNKD 60
A + ++ + ++P+ C I RI ++ LC CWS + FI +L
Sbjct: 46 ATYAAARPVLRHVADTLFPATC-IGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFG 104
Query: 61 NIDKDPLKSMQK--DLP-LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ D S + D P ++RS L+ + + LK+HDRTDLA MA+WM R
Sbjct: 105 HDFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGR 164
Query: 118 KI 119
++
Sbjct: 165 EL 166
>gi|110635335|ref|YP_675543.1| phosphoribosyltransferase [Mesorhizobium sp. BNC1]
gi|110286319|gb|ABG64378.1| phosphoribosyltransferase [Chelativorans sp. BNC1]
Length = 270
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFI---------TATEHILKNN---KDNIDKDP 66
+ P +C ++ LC CW ++ F+ T H + + I P
Sbjct: 32 LSPPVCIGCRNLVTAPGTLCPECWPELRFLEQPWCPVMGTPFPHDMGEGFLSGEAIANPP 91
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P + RS Y ++ +V LK+ DRTDLA MA+WM R
Sbjct: 92 --------PFARARSAVAYRGVAGRMVLSLKFSDRTDLAPWMARWMLRA 132
>gi|260576133|ref|ZP_05844126.1| competence protein F, putative [Rhodobacter sp. SW2]
gi|259021613|gb|EEW24916.1| competence protein F, putative [Rhodobacter sp. SW2]
Length = 240
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD-- 73
H +YP C ++ F LC CW + FIT K +DP ++ D
Sbjct: 7 LHLVYPPQCLSCDALVTTDFGLCSKCWRETPFITGLV-CDKCGTPLPGEDPGNAVHCDDC 65
Query: 74 ----LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
P Q R+ LY LV LK+ DR DLA A WM
Sbjct: 66 LTIARPWVQGRAALLYKGNGRRLVLALKHGDRLDLAKPAAGWM 108
>gi|126724616|ref|ZP_01740459.1| Competence protein F [Rhodobacterales bacterium HTCC2150]
gi|126705780|gb|EBA04870.1| Competence protein F [Rhodobacterales bacterium HTCC2150]
Length = 240
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQ 71
IYP+ C I++ F CG CW + FIT T ++ N + + M+
Sbjct: 8 IYPAQCLTCGDIVDSEFGFCGACWRETPFITGLICDLCGTSLPGDASEQNQELHCDECMR 67
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + RS +Y D + V LK+ DR D A A W+ ++ +
Sbjct: 68 IARPWEKGRSAMIYKDNARRFVLGLKHGDRLDFARPAANWIAAKMQGL 115
>gi|163745080|ref|ZP_02152440.1| competence protein F, putative [Oceanibulbus indolifex HEL-45]
gi|161381898|gb|EDQ06307.1| competence protein F, putative [Oceanibulbus indolifex HEL-45]
Length = 220
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 30 IINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTL 84
+++ F LCG CW FI T L D + P TQ R+ +
Sbjct: 1 MVDADFGLCGTCWRDTGFIGGTVCDACGVPLPGGGDLASPHCDACLVTPRPWTQGRAALI 60
Query: 85 YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Y DM LV LK+ DR ++A A+W+ + I
Sbjct: 61 YRDMGRKLVLALKHGDRQEIARPAARWLVHAAQDI 95
>gi|27375320|ref|NP_766849.1| competence protein F [Bradyrhizobium japonicum USDA 110]
gi|27348456|dbj|BAC45474.1| competence protein F [Bradyrhizobium japonicum USDA 110]
Length = 265
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 37 LCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89
+C CW+++ FI + D + + + S + R+ Y D++
Sbjct: 54 VCAACWARLSFIERPYCPRLGIPFVYDPGPDMLSMEAIASPPA---YQRARAAVRYDDVA 110
Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
LV LKY DRTDLA M +WM R ++
Sbjct: 111 RTLVHALKYQDRTDLAPAMGRWMARAGGEL 140
>gi|259418155|ref|ZP_05742074.1| competence protein F [Silicibacter sp. TrichCH4B]
gi|259347061|gb|EEW58875.1| competence protein F [Silicibacter sp. TrichCH4B]
Length = 243
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA-------TEHILKNNK 59
T+++ I +YP+ C ++ F LC CW FI+ + +
Sbjct: 2 TLRARIQTAVSLVYPARCLNCGGLVESDFGLCSACWRDTTFISGLVCDCCGVPLPGEADG 61
Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ D S +D Q R+ LY LV LK+ DRTDLA + WM R +
Sbjct: 62 QSVHCDECLSSPRDW--EQGRAAILYGGQGRRLVLALKHGDRTDLARPASGWMARAARDL 119
>gi|254486071|ref|ZP_05099276.1| competence protein F [Roseobacter sp. GAI101]
gi|214042940|gb|EEB83578.1| competence protein F [Roseobacter sp. GAI101]
Length = 242
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73
IYP +C ++ + LCG CW + FI T L N M
Sbjct: 12 IYPPVCLGCNQPVEKTAGLCGPCWRETAFIGGTVCDRCGVPLPGNDVGEMAHCDACMTDP 71
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
P Q RS LY + +V LK+ DR ++A A WM R + K
Sbjct: 72 PPWVQGRSALLYRGIGRKIVLGLKHGDRQEIARPAALWMARAVAK 116
>gi|149204345|ref|ZP_01881312.1| competence protein F, putative [Roseovarius sp. TM1035]
gi|149142230|gb|EDM30277.1| competence protein F, putative [Roseovarius sp. TM1035]
Length = 232
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITA----TEHILKNNKDNIDK---DPLKSMQ 71
+YP+ C + +++ F LCG CW FI+ T + + + + D M
Sbjct: 2 VYPARCTLCGAVVDSDFGLCGPCWRDTPFISGLVCETCGVPLPGEGHAEAAHCDDCLRMA 61
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P +Q R+ Y + L+ +LK+ DR D+ A+WM R + +
Sbjct: 62 R--PWSQGRAAIRYHENGRKLILMLKHGDRHDVVRPAAKWMARAAQPL 107
>gi|332559669|ref|ZP_08413991.1| competence protein F [Rhodobacter sphaeroides WS8N]
gi|332277381|gb|EGJ22696.1| competence protein F [Rhodobacter sphaeroides WS8N]
Length = 240
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73
++P C + + F LCG CW FI L +DP ++ D
Sbjct: 10 LFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDL-CGAPLPGEDPGHPVRCDDCLSS 68
Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P R+ LY D L LK+ DR DLA +A W+FR I
Sbjct: 69 ARPWAHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWIFRAARPI 115
>gi|56694999|ref|YP_165345.1| competence protein F, putative [Ruegeria pomeroyi DSS-3]
gi|56676736|gb|AAV93402.1| competence protein F, putative [Ruegeria pomeroyi DSS-3]
Length = 242
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73
+YP C ++ F LCG CW FI T L +D + M
Sbjct: 12 VYPPRCLGCGDLVTSDFGLCGKCWRDTPFIDGTVCDSCGAPLPGARDGHRIECDDCMAHP 71
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + R+ LY + +V LK+ DR +LA WM R +
Sbjct: 72 RPWSDGRAALLYTGRARRMVLALKHGDRPELARPGGLWMARAAAPL 117
>gi|163759885|ref|ZP_02166969.1| phosphoribosyltransferase [Hoeflea phototrophica DFL-43]
gi|162282843|gb|EDQ33130.1| phosphoribosyltransferase [Hoeflea phototrophica DFL-43]
Length = 187
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + R+ LY ++ L + LKY DR DLA MMA+WM R +I
Sbjct: 12 PYAKARAAVLYDGVARKLAQGLKYSDRADLAKMMAKWMVRAGREI 56
>gi|153008363|ref|YP_001369578.1| competence protein F [Ochrobactrum anthropi ATCC 49188]
gi|151560251|gb|ABS13749.1| competence protein F, putative [Ochrobactrum anthropi ATCC 49188]
Length = 262
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 14/110 (12%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT---------EHILKNNKDNIDKDPLKS 69
++P C ++ LC CW ++ FI H +N + + +
Sbjct: 34 LFPPTCIGCRAHVSEPGTLCPKCWPELRFIERPYCPVLGIPFSHDFGDNFTSAE-----A 88
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P ++RS L+ + + LK+HDRTDLA MA+WM R ++
Sbjct: 89 IADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGREL 138
>gi|115522182|ref|YP_779093.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisA53]
gi|115516129|gb|ABJ04113.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisA53]
Length = 273
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP-LKSMQK--DLPLTQ-IRSVTLYCDMSCVL 92
LC CWS++ FI D P + SMQ D P Q R+ Y +++ L
Sbjct: 58 LCASCWSQLSFIEPPFCERLGIPFVYDPGPGILSMQAIADPPAYQRARAAVRYDEVARTL 117
Query: 93 VRLLKYHDRTDLAIMMAQWM 112
V LK+HDR DLA +M +WM
Sbjct: 118 VHALKFHDRVDLAPVMGRWM 137
>gi|310817136|ref|YP_003965100.1| Competence protein F [Ketogulonicigenium vulgare Y25]
gi|308755871|gb|ADO43800.1| Competence protein F [Ketogulonicigenium vulgare Y25]
Length = 244
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
V ++ + H IYP C + + LCG CW+ FI L D +
Sbjct: 7 VGRLMDRIAHVIYPPGCMGCAAPVVGENALCGPCWAAAGFIAGASCTLCAVPLPGAGDAV 66
Query: 68 --KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ P + R++ +Y ++ L+ LK+ DRTDLA ++ W+ R
Sbjct: 67 CDACLYHAPPWDRGRALMVYEGLARQLILQLKHADRTDLAPALSSWLMR 115
>gi|148258762|ref|YP_001243347.1| putative competence protein F (COMF) [Bradyrhizobium sp. BTAi1]
gi|146410935|gb|ABQ39441.1| putative competence protein F (COMF) [Bradyrhizobium sp. BTAi1]
Length = 267
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSMQKDLPLTQIRSVTLYCDMSCVL 92
+C CW K+ FI D P ++++ + R+ Y +++ L
Sbjct: 52 VCAACWGKLSFIERPYCPKLGIPFVYDPGPELLSMEAIAAPPAYAKARAAVRYDEVARTL 111
Query: 93 VRLLKYHDRTDLAIMMAQWMFRVLEKI 119
V LKY DRTDLA +M +WM R ++
Sbjct: 112 VHQLKYQDRTDLAPIMGRWMARAGREL 138
>gi|220921700|ref|YP_002497001.1| phosphoribosyltransferase [Methylobacterium nodulans ORS 2060]
gi|219946306|gb|ACL56698.1| phosphoribosyltransferase [Methylobacterium nodulans ORS 2060]
Length = 264
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNN 58
MP+ + V S + L IYP C LC CW + FI E +
Sbjct: 1 MPSFHRPVLSALEALVGLIYPPSCIACGAATGTPHALCPACWRGMRFIEPPYCERLGTPF 60
Query: 59 KDNIDKDPL--KSMQKDLPL-TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
++ L + D P+ + R+ Y D + LV LKY DR DLA + M R
Sbjct: 61 AVDLGVPGLLSPAAMADPPVFARARAAVRYDDAARRLVHRLKYEDRLDLAAALGGMMARA 120
>gi|159046040|ref|YP_001534834.1| competence protein F [Dinoroseobacter shibae DFL 12]
gi|157913800|gb|ABV95233.1| competence protein F [Dinoroseobacter shibae DFL 12]
Length = 258
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 11/112 (9%)
Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--------EHILKNNKDNIDKDPL 67
+YP C + F LCG C + FI L + +I +D L
Sbjct: 10 LRTVYPPSCITCRAPVASDFGLCGECLRQTPFIAGGICNTCGVPVAGLSETETDICEDCL 69
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P ++ R+V Y DM LV LK+ DRTDLA W+ R +
Sbjct: 70 NIPR---PWSRGRAVMTYQDMGRTLVLQLKHSDRTDLARPAGAWLARAARPL 118
>gi|239832955|ref|ZP_04681284.1| competence protein F [Ochrobactrum intermedium LMG 3301]
gi|239825222|gb|EEQ96790.1| competence protein F [Ochrobactrum intermedium LMG 3301]
Length = 288
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 16/127 (12%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITAT---------E 52
+ Q V + ++P C I R+ ++ LC CW ++ FI
Sbjct: 44 GLRQLVGRAVRSSADTLFPPTC-IGCRMHVSEPGTLCPKCWPELRFIERPYCPVLGIPFS 102
Query: 53 HILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
H N + + ++ P ++RS L+ + + LK+HDRTDLA MA+WM
Sbjct: 103 HDFGENFMSAE-----AIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWM 157
Query: 113 FRVLEKI 119
R ++
Sbjct: 158 QRAGREL 164
>gi|222149922|ref|YP_002550879.1| competence protein F [Agrobacterium vitis S4]
gi|221736904|gb|ACM37867.1| competence protein F [Agrobacterium vitis S4]
Length = 236
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATE-HILKNNKDNIDKDPLKSMQ-----K 72
+YP C + LC CW + FI IL DP + M
Sbjct: 6 VYPPGCATCGLPVAKAGSLCSDCWCSVRFIERPYCEILGLP---FGFDPGQGMVCAEAIA 62
Query: 73 DLPL-TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ P+ ++R+ ++ + LV LKY DRTDLA MMA WM R
Sbjct: 63 NPPVFDRLRAAVVHDGAARDLVHRLKYGDRTDLAPMMAHWMIRA 106
>gi|144900147|emb|CAM77011.1| competence protein F [Magnetospirillum gryphiswaldense MSR-1]
Length = 244
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS---- 69
+L + P +C I+ LC CWS + F+ A + D DP +
Sbjct: 10 KLLDAVLPPLCLCCGAIVAEPGALCAQCWSGLRFVAAPHCPVCGQP--FDTDPGGADMVC 67
Query: 70 ---MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + P + R+V Y D S L+ K+ DR + A +W+ R ++
Sbjct: 68 GRCLAEPPPWDRARAVFCYDDASKPLILRFKHADRLEGAPAFGRWLARAGAEL 120
>gi|84514889|ref|ZP_01002252.1| competence protein F, putative [Loktanella vestfoldensis SKA53]
gi|84511048|gb|EAQ07502.1| competence protein F, putative [Loktanella vestfoldensis SKA53]
Length = 241
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLK 68
+ IYP+ C LCG CW + FI T L + D
Sbjct: 6 SVIRAIYPAQCVACETQTQAENGLCGTCWRETQFIDGTICDTCGAPLPGDSDGHRLQCDD 65
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
M P + R+ +Y + LV LK+ DRTDL WM R+ +
Sbjct: 66 CMAIARPWDRGRAALVYNGIGRKLVLGLKHGDRTDLVEPAGLWMARLARAL 116
>gi|83942062|ref|ZP_00954524.1| Competence protein F [Sulfitobacter sp. EE-36]
gi|83847882|gb|EAP85757.1| Competence protein F [Sulfitobacter sp. EE-36]
Length = 242
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKD 73
IYP C + LCG CW FI L + D +
Sbjct: 12 IYPPSCLACGAWVTAHGGLCGPCWRDTGFIEGVVCETCGIPLLGDLSETDVRCDACLAAP 71
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
P R+ LY D LV LK+ DR D+A WM RV+
Sbjct: 72 PPWEHGRAALLYRDTGRRLVLALKHGDRQDIAKPAGHWMARVI 114
>gi|221640691|ref|YP_002526953.1| Competence protein F [Rhodobacter sphaeroides KD131]
gi|221161472|gb|ACM02452.1| Competence protein F [Rhodobacter sphaeroides KD131]
Length = 240
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73
++P C + + F LCG CW FI L +DP ++ D
Sbjct: 10 LFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDL-CGAPLPGEDPGHPVRCDDCLSS 68
Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + R+ LY D L LK+ DR DLA +A W+ R I
Sbjct: 69 ARPWDRGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115
>gi|154247019|ref|YP_001417977.1| phosphoribosyltransferase [Xanthobacter autotrophicus Py2]
gi|154161104|gb|ABS68320.1| phosphoribosyltransferase [Xanthobacter autotrophicus Py2]
Length = 255
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+++ L P C I + LCG CW K+ FI + + DP
Sbjct: 14 ALRAFGSGLLGLALPPTCIACGGITGMAGGLCGPCWGKLAFI--SRPFCERTGAPFTHDP 71
Query: 67 ----LKSMQKDLP--LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ + D P + R+ + D++ LV LKY DR D+A +A+ M
Sbjct: 72 GGARISAQALDDPPAFDRARAAVTFNDVARDLVHKLKYADRLDVAAPLARLM 123
>gi|126463616|ref|YP_001044730.1| competence protein F [Rhodobacter sphaeroides ATCC 17029]
gi|126105280|gb|ABN77958.1| competence protein F [Rhodobacter sphaeroides ATCC 17029]
Length = 240
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73
++P C + + F LCG CW FI A + +DP ++ D
Sbjct: 10 LFPPQCLLCETQVTTEFGLCGACWRDTPFI-AGLVCDRCGAPLPGEDPGHPVRCDDCLSS 68
Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P R+ LY D L LK+ DR DLA +A W+ R I
Sbjct: 69 ARPWDHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115
>gi|77464774|ref|YP_354278.1| competence protein F [Rhodobacter sphaeroides 2.4.1]
gi|77389192|gb|ABA80377.1| Competence protein F [Rhodobacter sphaeroides 2.4.1]
Length = 240
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73
++P C + + F LCG CW FI L +DP ++ D
Sbjct: 10 LFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDL-CGAPLPGEDPGHPVRCDDCLSS 68
Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P R+ LY D L LK+ DR DLA +A W+ R I
Sbjct: 69 ARPWDHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115
>gi|218659666|ref|ZP_03515596.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli IE4771]
Length = 182
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P ++RS + LV LKY DRTDLA MMA WM R
Sbjct: 12 PFDRVRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRA 52
>gi|84500737|ref|ZP_00998986.1| competence protein F, putative [Oceanicola batsensis HTCC2597]
gi|84391690|gb|EAQ04022.1| competence protein F, putative [Oceanicola batsensis HTCC2597]
Length = 244
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNN---KDNIDK 64
+ S++ +YP C ++ LCG CW FI A+ L D++
Sbjct: 3 LASVLQTALRLVYPPTCLTCDALVEADHGLCGTCWGATPFIGASVCGLCGAPLPGDHVAA 62
Query: 65 DPL--KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
L + + P R+ +Y D + LV LK+ DR D+A + WM
Sbjct: 63 GDLCDDCLTTERPWDAGRAALVYRDNARRLVLGLKHGDRMDIARPASLWM 112
>gi|319406072|emb|CBI79702.1| competence protein ComF [Bartonella sp. AR 15-3]
Length = 225
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 36 CLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDM 88
+C CW + FIT T + + + ++Q P + +RS ++ +
Sbjct: 7 TVCSDCWKDLQFITKPYCPVMGTPFAYDIGEKFLSGE---AIQNPPPFSFLRSAVVHKGL 63
Query: 89 SCVLVRLLKYHDRTDLAIMMAQWM 112
+ L LKY DR +LA MA WM
Sbjct: 64 ARTLATQLKYGDRLELASFMANWM 87
>gi|158425919|ref|YP_001527211.1| competence protein F [Azorhizobium caulinodans ORS 571]
gi|158332808|dbj|BAF90293.1| competence protein F [Azorhizobium caulinodans ORS 571]
Length = 264
Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-------ATEHILKNNKDNIDKDPL 67
L P C I+ LC CW + I T ++ + +
Sbjct: 31 LLDLALPPTCIACKAIVGTPGTLCAACWRDLRLIERPYCERLGTPFPFEDGATRLS---V 87
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+++ + R+ TL+ +S LV LKY DR DLA+ MA+ M R
Sbjct: 88 EAVTDPPAFDRARAATLFGPVSQDLVHGLKYADRMDLALPMARLMARA 135
>gi|190571652|ref|YP_001976010.1| competence protein f [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019054|ref|ZP_03334861.1| competence protein f [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357924|emb|CAQ55385.1| competence protein f [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995163|gb|EEB55804.1| competence protein f [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 234
Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-------ILKNNKDNIDKDPLKSMQ 71
I+P++C RII+ + LC C KI+F+ T+H ++ +N D K +
Sbjct: 13 IFPNVCVSCERIIDKSYDLCSECNKKINFL--TKHYCNVCGVVIPDNIDTCG----KCIS 66
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P +RSV Y + S ++ K+ D + + A+WM++ + I
Sbjct: 67 NPSPFKVLRSVFAYDEHSKNMIINFKFFDNLNYVKVYAKWMYKANKDI 114
>gi|91974589|ref|YP_567248.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB5]
gi|91681045|gb|ABE37347.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB5]
Length = 272
Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNI-DKDP-LKSMQK--DLPLTQIRSVTLYCD-MSCV 91
LC CWS++ FI A + K + D P L SMQ D P + D ++
Sbjct: 57 LCAPCWSQLSFI-APPYCEKLGIPFVYDPGPGLLSMQAIADPPAYARARAAVRYDEVAKT 115
Query: 92 LVRLLKYHDRTDLAIMMAQWM 112
LV LK+HDR DLA M +WM
Sbjct: 116 LVHALKFHDRVDLAPTMGRWM 136
>gi|146337714|ref|YP_001202762.1| putative competence protein F (COMF) [Bradyrhizobium sp. ORS278]
gi|146190520|emb|CAL74519.1| putative competence protein F (COMF) [Bradyrhizobium sp. ORS278]
Length = 267
Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP-LKSMQKDLPLTQIRSVTL---YCDMSCVL 92
+C CW K+ FI D P L SM+ Y D++ L
Sbjct: 52 VCAACWGKLSFIERPYCPKLGIPFVYDPGPELLSMEAIAAPPAYARARAAVRYDDVASTL 111
Query: 93 VRLLKYHDRTDLAIMMAQWMFRVLEKI 119
V LKY DRTDLA +M +WM R ++
Sbjct: 112 VHALKYQDRTDLAPIMGRWMTRAGHEL 138
>gi|146278666|ref|YP_001168825.1| amidophosphoribosyltransferase-like protein [Rhodobacter
sphaeroides ATCC 17025]
gi|145556907|gb|ABP71520.1| amidophosphoribosyltransferase-like protein [Rhodobacter
sphaeroides ATCC 17025]
Length = 240
Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD----- 73
++P C + ++ F LCG CW F+ L +DP + D
Sbjct: 10 LFPPQCLLCETLVTTDFGLCGPCWRATPFVAGLVCDLCGCP-LPGEDPGHPVHCDECLTS 68
Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P Q R+ LY D + LV LK+ DR DL A W+ V +
Sbjct: 69 ARPWDQGRAAMLYRDNARKLVLALKHGDRLDLVRPAAGWILGVARPL 115
>gi|126734442|ref|ZP_01750189.1| Competence protein F [Roseobacter sp. CCS2]
gi|126717308|gb|EBA14172.1| Competence protein F [Roseobacter sp. CCS2]
Length = 240
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA-------TEHILKNNKDNIDKDP 66
+ IYP C LC CW FI T +++ + + D
Sbjct: 5 SVIRAIYPPQCVACDAQTEDDNGLCAVCWKDTQFIGGLVCNTCGTPLPGEDHGEVVQCDD 64
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ + P RSV +Y + LV LK+ DRTDLA A+WM + + +
Sbjct: 65 CMTIAR--PWDTGRSVLVYNGVGRRLVLGLKHGDRTDLAPTAARWMAQKMANL 115
>gi|298292753|ref|YP_003694692.1| phosphoribosyltransferase [Starkeya novella DSM 506]
gi|296929264|gb|ADH90073.1| phosphoribosyltransferase [Starkeya novella DSM 506]
Length = 273
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQ-KDL 74
P IC ++ CLC CW + FI L + D +D + S D
Sbjct: 38 PPICMTRRAAVDQPGCLCATCWRGMEFIERPYCDRLGTPLPYDADPLDGPAVSSAALADP 97
Query: 75 PLTQIRSVTL-YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + +++ LV LKY DR D+A MA+ M R I
Sbjct: 98 PAYARARAVAAFGEVARDLVHALKYADRLDVAPPMARMMARAGADI 143
>gi|118588528|ref|ZP_01545937.1| phosphoribosyltransferase [Stappia aggregata IAM 12614]
gi|118439234|gb|EAV45866.1| phosphoribosyltransferase [Stappia aggregata IAM 12614]
Length = 253
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 37 LCGHCWSKIHFITAT--EHILKNNKDNIDKDPLKSMQKDLP--LTQIRSVTLYCDMSCVL 92
LC CWS++ F+ E + ++ + P ++R+V Y + +
Sbjct: 36 LCAQCWSQVPFLEKPWCERLGIPFAYDVGEGAWSPQAITAPPVFNRLRAVAFYDGPARQM 95
Query: 93 VRLLKYHDRTDLAIMMAQWMFR 114
V LK+ R DLA MA+WM R
Sbjct: 96 VHALKFSGRRDLARPMARWMVR 117
>gi|86747153|ref|YP_483649.1| phosphoribosyltransferase [Rhodopseudomonas palustris HaA2]
gi|86570181|gb|ABD04738.1| Phosphoribosyltransferase [Rhodopseudomonas palustris HaA2]
Length = 254
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNI-DKDP-LKSMQK--DLPLTQIRSVTLYCD-MSCV 91
LC CWS++ FI A + K + D P + SMQ D P + D ++
Sbjct: 39 LCPQCWSQLSFI-APPYCEKLGIPFVYDPGPGILSMQAIADPPAYARARAAVRYDEVAKT 97
Query: 92 LVRLLKYHDRTDLAIMMAQWM 112
LV LK+HDR DLA M +WM
Sbjct: 98 LVHALKFHDRIDLAPTMGRWM 118
>gi|296444589|ref|ZP_06886553.1| phosphoribosyltransferase [Methylosinus trichosporium OB3b]
gi|296257857|gb|EFH04920.1| phosphoribosyltransferase [Methylosinus trichosporium OB3b]
Length = 262
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 5/117 (4%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHI-LKNNKDNIDK 64
++ L +YP +C + + LC CW + FI E + L ++D
Sbjct: 21 LRGFGARLLDLVYPPVCLVCREAVATHGALCPACWGGMGFIERPYCERLGLPFDRDLGAG 80
Query: 65 DPLKSMQKDLPLTQIRSVTLY--CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ D P D + L LKY+DR +LA + +WM R ++
Sbjct: 81 AISLAASADPPAFARARAVARYDSDKARSLAHRLKYYDRLELAEPLGRWMARAGAEL 137
>gi|197104234|ref|YP_002129611.1| predicted amidophosphoribosyltransferase [Phenylobacterium zucineum
HLK1]
gi|196477654|gb|ACG77182.1| predicted amidophosphoribosyltransferase [Phenylobacterium zucineum
HLK1]
Length = 259
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 40 HCWSKIHFITATEHILKNNKDNIDKDPLKS----MQKDLPLTQIRSVTLYCDMSCVLVRL 95
WS+IHF+ + D DP + + R+ LY + S +
Sbjct: 49 GAWSRIHFLDGP--VCDGCGVPFDYDPGARCPACQARPRAFDRARAACLYDETSREPILK 106
Query: 96 LKYHDRTDLAIMMAQWMFRVLEKI 119
LK+ DRTDLA + A+W+ R ++
Sbjct: 107 LKHADRTDLAPLFARWLSRAAREL 130
>gi|306820763|ref|ZP_07454389.1| phosphoribosyl transferase, competence protein [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304551212|gb|EFM39177.1| phosphoribosyl transferase, competence protein [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 222
Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 34 RFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLV 93
+F LC +C+ I F+ I DK+ ++ ++ D ++++ T+Y D+ ++
Sbjct: 23 KFSLCKNCYENIEFLYDKNTIF-------DKEVMELLKNDY-ISKVHITTIYNDIMKNMI 74
Query: 94 RLLKYHDRTDLAIMMAQWMFRVLEK 118
+KY ++T LA A M ++EK
Sbjct: 75 HGIKYSNKTYLAKFFASMMCELIEK 99
>gi|90422044|ref|YP_530414.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB18]
gi|90104058|gb|ABD86095.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB18]
Length = 269
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDP-LKSMQK--DLPLTQIRSVTLYCD-MSCVL 92
+C CWS++ FI D P + SMQ D P + D ++ L
Sbjct: 54 VCAACWSQLSFIAPPYCERLGIPFVYDPGPGILSMQAIADPPAYARARAAVRYDEVARTL 113
Query: 93 VRLLKYHDRTDLAIMMAQWM 112
V LK+HDR DLA M +WM
Sbjct: 114 VHALKFHDRVDLAPTMGRWM 133
>gi|182678125|ref|YP_001832271.1| phosphoribosyltransferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634008|gb|ACB94782.1| phosphoribosyltransferase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 264
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKDNIDKDPLKSMQ--KDL 74
I+P +C + I LC CW K+ FI E + ++ +D L S + +
Sbjct: 36 IFPPLCLCCRKAIASTGALCPECWDKVRFIERPFCERLGTPFSMDLGQDGLLSPEAVANP 95
Query: 75 PL-TQIRSVTLYCDMSCV--LVRLLKYHDRTDLAIMMAQWMFRV 115
P+ + R+V + D V LV LKY DR ++A + WM R
Sbjct: 96 PVYGRARAVAQF-DEGPVRHLVHRLKYGDRLEVARPLGLWMARA 138
>gi|91794147|ref|YP_563798.1| putative thiol-disulphide oxidoreductase DCC [Shewanella
denitrificans OS217]
gi|91716149|gb|ABE56075.1| putative thiol-disulphide oxidoreductase DCC [Shewanella
denitrificans OS217]
Length = 176
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 38 CGHCWSKIHFITATEHILKNNKDNID--------KDPLKSMQKD--LPLTQIRSVTLYCD 87
C C S ++FI A +H N + + D K++ K+ +P QI S+T
Sbjct: 40 CNLCHSAVNFIIARDHTAANPQAALGVFRFAPLQGDSAKALMKECAIPQAQIDSLTSTQS 99
Query: 88 MSCVLVRLLKYHDRTDLAIMMAQ 110
S VL+ +Y+ R+D A+ +A+
Sbjct: 100 GSFVLIDAGRYYFRSDAALEVAR 122
>gi|330994801|ref|ZP_08318723.1| Protein gntX [Gluconacetobacter sp. SXCC-1]
gi|329758062|gb|EGG74584.1| Protein gntX [Gluconacetobacter sp. SXCC-1]
Length = 236
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 37 LCGHCWSKIHFITA------TEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSC 90
LC C +IH ITA D + + P + R+ +Y D
Sbjct: 20 LCATCVGRIHLITAPFCHCCVMPFTSRAAGGPDLTCVACRENPPPWREARAAMVYDDTPR 79
Query: 91 VLVRLLKYHDRTDLAIMMAQWM 112
L+ LKY DRT+ A ++A++M
Sbjct: 80 TLILPLKYADRTENAALLARYM 101
>gi|262041687|ref|ZP_06014879.1| rhamnulokinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|259040949|gb|EEW42028.1| rhamnulokinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
Length = 345
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA 50
Q V EL CI+ S+ +Y+R++N L GH +S++H +
Sbjct: 215 QPVPESDAELARCIFDSLALLYARVLNELAALRGHPFSQLHIVGG 259
>gi|302338222|ref|YP_003803428.1| DNA polymerase III gamma/tau subunits [Spirochaeta smaragdinae DSM
11293]
gi|301635407|gb|ADK80834.1| DNA polymerase III gamma/tau subunits [Spirochaeta smaragdinae DSM
11293]
Length = 405
Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 52 EHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYC 86
E I+K+N +++K S+ K++P+ QIR++T +C
Sbjct: 159 EKIVKSNASHVEKICGSSVSKNIPIDQIRNITYWC 193
>gi|187608115|ref|NP_001119942.1| potassium voltage-gated channel subfamily D member 1 [Danio rerio]
gi|169145712|emb|CAQ15506.1| novel protein similar to vertebrate potassium voltage-gated
channel, Shal-related subfamily, member 1 (KCND1) [Danio
rerio]
gi|169158699|emb|CAQ14871.1| novel protein similar to vertebrate potassium voltage-gated
channel, Shal-related subfamily, member 1 (KCND1) [Danio
rerio]
Length = 632
Score = 33.9 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 54 ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDLAIMMAQWM 112
++ N + + PLK +KDLP + S+ +C D +CVL+ +Y R A ++M
Sbjct: 199 VIANVVETVPCRPLKGSKKDLPCGEKYSLAFFCMDTACVLIFTFEYLMRLFAAPSRCKFM 258
Query: 113 FRVLEKI 119
V+ I
Sbjct: 259 RSVMSVI 265
>gi|225849074|ref|YP_002729238.1| amino acid permease-associated region [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644303|gb|ACN99353.1| amino acid permease-associated region [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 460
Score = 33.5 bits (75), Expect = 9.0, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
KDP K++ K L L+ S LY +S VLV +L Y+ +A M++V EK
Sbjct: 244 KDPQKTLPKGLILSLSISTVLYITVSFVLVGILPYYSYEGKPDSLAYAMYQVNEK 298
Searching..................................................done
Results from round 2
>gi|256158382|ref|ZP_05456280.1| putative competence protein F [Brucella ceti M490/95/1]
gi|256253801|ref|ZP_05459337.1| putative competence protein F [Brucella ceti B1/94]
gi|260169308|ref|ZP_05756119.1| putative competence protein F [Brucella sp. F5/99]
gi|261220934|ref|ZP_05935215.1| phosphoribosyltransferase [Brucella ceti B1/94]
gi|261758821|ref|ZP_06002530.1| competence protein F [Brucella sp. F5/99]
gi|265996894|ref|ZP_06109451.1| phosphoribosyltransferase [Brucella ceti M490/95/1]
gi|260919518|gb|EEX86171.1| phosphoribosyltransferase [Brucella ceti B1/94]
gi|261738805|gb|EEY26801.1| competence protein F [Brucella sp. F5/99]
gi|262551362|gb|EEZ07352.1| phosphoribosyltransferase [Brucella ceti M490/95/1]
Length = 262
Score = 166 bits (421), Expect = 8e-40, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|306842968|ref|ZP_07475602.1| competence protein F [Brucella sp. BO2]
gi|306286896|gb|EFM58421.1| competence protein F [Brucella sp. BO2]
Length = 262
Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|306844850|ref|ZP_07477433.1| competence protein F [Brucella sp. BO1]
gi|306274782|gb|EFM56563.1| competence protein F [Brucella sp. BO1]
Length = 262
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|163843904|ref|YP_001628308.1| protein gntX [Brucella suis ATCC 23445]
gi|254707589|ref|ZP_05169417.1| putative competence protein F [Brucella pinnipedialis M163/99/10]
gi|254708873|ref|ZP_05170684.1| putative competence protein F [Brucella pinnipedialis B2/94]
gi|254713704|ref|ZP_05175515.1| putative competence protein F [Brucella ceti M644/93/1]
gi|254715946|ref|ZP_05177757.1| putative competence protein F [Brucella ceti M13/05/1]
gi|256030399|ref|ZP_05444013.1| putative competence protein F [Brucella pinnipedialis M292/94/1]
gi|256059857|ref|ZP_05450044.1| putative competence protein F [Brucella neotomae 5K33]
gi|256370278|ref|YP_003107789.1| competence protein F, putative [Brucella microti CCM 4915]
gi|261217709|ref|ZP_05931990.1| phosphoribosyltransferase [Brucella ceti M13/05/1]
gi|261315076|ref|ZP_05954273.1| phosphoribosyltransferase [Brucella pinnipedialis M163/99/10]
gi|261316366|ref|ZP_05955563.1| phosphoribosyltransferase [Brucella pinnipedialis B2/94]
gi|261321444|ref|ZP_05960641.1| phosphoribosyltransferase [Brucella ceti M644/93/1]
gi|261323827|ref|ZP_05963024.1| phosphoribosyltransferase [Brucella neotomae 5K33]
gi|265987438|ref|ZP_06099995.1| phosphoribosyltransferase [Brucella pinnipedialis M292/94/1]
gi|163674627|gb|ABY38738.1| Protein gntX [Brucella suis ATCC 23445]
gi|256000441|gb|ACU48840.1| competence protein F, putative [Brucella microti CCM 4915]
gi|260922798|gb|EEX89366.1| phosphoribosyltransferase [Brucella ceti M13/05/1]
gi|261294134|gb|EEX97630.1| phosphoribosyltransferase [Brucella ceti M644/93/1]
gi|261295589|gb|EEX99085.1| phosphoribosyltransferase [Brucella pinnipedialis B2/94]
gi|261299807|gb|EEY03304.1| phosphoribosyltransferase [Brucella neotomae 5K33]
gi|261304102|gb|EEY07599.1| phosphoribosyltransferase [Brucella pinnipedialis M163/99/10]
gi|264659635|gb|EEZ29896.1| phosphoribosyltransferase [Brucella pinnipedialis M292/94/1]
Length = 262
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|319407556|emb|CBI81206.1| competence protein ComF [Bartonella sp. 1-1C]
Length = 247
Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+ +I L +YP C ++I++ +C CW + FIT + D
Sbjct: 1 MNKLIKRLIKILYPPTCHGCAKIVSAYGTICSDCWQDLQFITKPYCPVMGTPFAYDMGEG 60
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++Q P + +RS ++ ++ VL LKY DR +LA MA WM +I
Sbjct: 61 FLSGEAIQNPPPFSSLRSAVVHKGLARVLTTRLKYGDRLELAPFMANWMIFAGHEI 116
>gi|161619796|ref|YP_001593683.1| protein gntX [Brucella canis ATCC 23365]
gi|260567631|ref|ZP_05838101.1| competence protein F [Brucella suis bv. 4 str. 40]
gi|161336607|gb|ABX62912.1| Protein gntX [Brucella canis ATCC 23365]
gi|260157149|gb|EEW92229.1| competence protein F [Brucella suis bv. 4 str. 40]
Length = 262
Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|254700524|ref|ZP_05162352.1| putative competence protein F [Brucella suis bv. 5 str. 513]
gi|261751028|ref|ZP_05994737.1| phosphoribosyltransferase [Brucella suis bv. 5 str. 513]
gi|261740781|gb|EEY28707.1| phosphoribosyltransferase [Brucella suis bv. 5 str. 513]
Length = 262
Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|319404563|emb|CBI78169.1| competence protein ComF [Bartonella rochalimae ATCC BAA-1498]
Length = 247
Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+ +I L +YP C ++I++ +C CW + FIT + D
Sbjct: 1 MNKLIKRLIKILYPPTCHGCAKIVSAYGTICSDCWKDLQFITKPYCPVMGTPFAYDMGEG 60
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++Q P + +RS ++ ++ VL LKY DR +LA MA WM +I
Sbjct: 61 FLSGEAIQNPPPFSSLRSAVVHKGLARVLTTRLKYGDRLELAPFMANWMIFAGHEI 116
>gi|23502731|ref|NP_698858.1| competence protein F [Brucella suis 1330]
gi|254704895|ref|ZP_05166723.1| putative competence protein F [Brucella suis bv. 3 str. 686]
gi|261755589|ref|ZP_05999298.1| phosphoribosyltransferase [Brucella suis bv. 3 str. 686]
gi|23348747|gb|AAN30773.1| competence protein F, putative [Brucella suis 1330]
gi|261745342|gb|EEY33268.1| phosphoribosyltransferase [Brucella suis bv. 3 str. 686]
Length = 262
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|225628082|ref|ZP_03786117.1| protein gntX [Brucella ceti str. Cudo]
gi|225616907|gb|EEH13954.1| protein gntX [Brucella ceti str. Cudo]
Length = 290
Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 46 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 105
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 106 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 165
Query: 119 I 119
+
Sbjct: 166 L 166
>gi|148560259|ref|YP_001259705.1| putative competence protein F [Brucella ovis ATCC 25840]
gi|148371516|gb|ABQ61495.1| putative competence protein F [Brucella ovis ATCC 25840]
Length = 262
Score = 164 bits (416), Expect = 3e-39, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|62290737|ref|YP_222530.1| competence protein F [Brucella abortus bv. 1 str. 9-941]
gi|82700649|ref|YP_415223.1| competence protein F [Brucella melitensis biovar Abortus 2308]
gi|189024949|ref|YP_001935717.1| competence protein F [Brucella abortus S19]
gi|254690026|ref|ZP_05153280.1| putative competence protein F [Brucella abortus bv. 6 str. 870]
gi|254694515|ref|ZP_05156343.1| putative competence protein F [Brucella abortus bv. 3 str. Tulya]
gi|254696140|ref|ZP_05157968.1| putative competence protein F [Brucella abortus bv. 2 str. 86/8/59]
gi|254731058|ref|ZP_05189636.1| putative competence protein F [Brucella abortus bv. 4 str. 292]
gi|256258280|ref|ZP_05463816.1| putative competence protein F [Brucella abortus bv. 9 str. C68]
gi|260546000|ref|ZP_05821740.1| competence protein F [Brucella abortus NCTC 8038]
gi|260755561|ref|ZP_05867909.1| phosphoribosyltransferase [Brucella abortus bv. 6 str. 870]
gi|260758784|ref|ZP_05871132.1| phosphoribosyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760508|ref|ZP_05872851.1| phosphoribosyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884585|ref|ZP_05896199.1| phosphoribosyltransferase [Brucella abortus bv. 9 str. C68]
gi|261214832|ref|ZP_05929113.1| phosphoribosyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|297247124|ref|ZP_06930842.1| competence protein ComFC [Brucella abortus bv. 5 str. B3196]
gi|62196869|gb|AAX75169.1| competence protein F, hypothetical [Brucella abortus bv. 1 str.
9-941]
gi|82616750|emb|CAJ11836.1| competence protein F [Brucella melitensis biovar Abortus 2308]
gi|189020521|gb|ACD73243.1| competence protein F [Brucella abortus S19]
gi|260096107|gb|EEW79983.1| competence protein F [Brucella abortus NCTC 8038]
gi|260669102|gb|EEX56042.1| phosphoribosyltransferase [Brucella abortus bv. 4 str. 292]
gi|260670940|gb|EEX57761.1| phosphoribosyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675669|gb|EEX62490.1| phosphoribosyltransferase [Brucella abortus bv. 6 str. 870]
gi|260874113|gb|EEX81182.1| phosphoribosyltransferase [Brucella abortus bv. 9 str. C68]
gi|260916439|gb|EEX83300.1| phosphoribosyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|297174293|gb|EFH33640.1| competence protein ComFC [Brucella abortus bv. 5 str. B3196]
Length = 262
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|17986467|ref|NP_539101.1| competence protein F [Brucella melitensis bv. 1 str. 16M]
gi|225853317|ref|YP_002733550.1| competence protein F [Brucella melitensis ATCC 23457]
gi|256045489|ref|ZP_05448372.1| putative competence protein F [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263196|ref|ZP_05465728.1| competence protein F [Brucella melitensis bv. 2 str. 63/9]
gi|260562798|ref|ZP_05833284.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265991911|ref|ZP_06104468.1| phosphoribosyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|17982065|gb|AAL51365.1| competence protein f [Brucella melitensis bv. 1 str. 16M]
gi|225641682|gb|ACO01596.1| competence protein F [Brucella melitensis ATCC 23457]
gi|260152814|gb|EEW87906.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263002977|gb|EEZ15270.1| phosphoribosyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093118|gb|EEZ17253.1| competence protein F [Brucella melitensis bv. 2 str. 63/9]
gi|326409880|gb|ADZ66945.1| competence protein F [Brucella melitensis M28]
Length = 262
Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|326539594|gb|ADZ87809.1| competence protein F [Brucella melitensis M5-90]
Length = 251
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 7 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 66
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 67 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 126
Query: 119 I 119
+
Sbjct: 127 L 127
>gi|254717947|ref|ZP_05179758.1| protein gntX [Brucella sp. 83/13]
gi|265982890|ref|ZP_06095625.1| phosphoribosyltransferase [Brucella sp. 83/13]
gi|306838253|ref|ZP_07471103.1| competence protein F [Brucella sp. NF 2653]
gi|264661482|gb|EEZ31743.1| phosphoribosyltransferase [Brucella sp. 83/13]
gi|306406656|gb|EFM62885.1| competence protein F [Brucella sp. NF 2653]
Length = 262
Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI + +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERSYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM +
Sbjct: 78 DFGDHFLSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQHAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|256112214|ref|ZP_05453135.1| competence protein F [Brucella melitensis bv. 3 str. Ether]
gi|265993642|ref|ZP_06106199.1| phosphoribosyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|262764623|gb|EEZ10544.1| phosphoribosyltransferase [Brucella melitensis bv. 3 str. Ether]
Length = 262
Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 18 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 77
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 78 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 137
Query: 119 I 119
+
Sbjct: 138 L 138
>gi|237816244|ref|ZP_04595237.1| competence protein F [Brucella abortus str. 2308 A]
gi|237788311|gb|EEP62526.1| competence protein F [Brucella abortus str. 2308 A]
Length = 290
Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + ++ + ++P+ C ++ LC CWS + FI +
Sbjct: 46 ATYAAARPVLRHVADTLFPATCIGCRIHVSQPGTLCPQCWSGLRFIERPYCPVLGTPFGH 105
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 106 DFGDHFLSAEAIADPPSFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 165
Query: 119 I 119
+
Sbjct: 166 L 166
>gi|319899208|ref|YP_004159301.1| competence protein ComF [Bartonella clarridgeiae 73]
gi|319403172|emb|CBI76731.1| competence protein ComF [Bartonella clarridgeiae 73]
Length = 247
Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+ +I L +YP IC ++I++ +C CW + FIT + D
Sbjct: 1 MNKLIKRLITILYPPICHGCAKIVSAYGTICSDCWKDLQFITKPYCPVMGTPFAYDMGEG 60
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++Q P + +RS ++ ++ LV LKY DR +LA MA M +I
Sbjct: 61 FLSGEAIQNSPPFSSLRSAVVHKGLARTLVTRLKYGDRLELASFMANSMIFAGHEI 116
>gi|254780310|ref|YP_003064723.1| hypothetical protein CLIBASIA_00975 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039987|gb|ACT56783.1| hypothetical protein CLIBASIA_00975 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 119
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD
Sbjct: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI
Sbjct: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
>gi|239832955|ref|ZP_04681284.1| competence protein F [Ochrobactrum intermedium LMG 3301]
gi|239825222|gb|EEQ96790.1| competence protein F [Ochrobactrum intermedium LMG 3301]
Length = 288
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
+ Q V + ++P C ++ LC CW ++ FI + +
Sbjct: 44 GLRQLVGRAVRSSADTLFPPTCIGCRMHVSEPGTLCPKCWPELRFIERPYCPVLGIPFSH 103
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D +++ P ++RS L+ + + LK+HDRTDLA MA+WM R +
Sbjct: 104 DFGENFMSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGRE 163
Query: 119 I 119
+
Sbjct: 164 L 164
>gi|49475199|ref|YP_033240.1| competence protein comF [Bartonella henselae str. Houston-1]
gi|49238004|emb|CAF27209.1| Competence protein comF [Bartonella henselae str. Houston-1]
Length = 262
Score = 157 bits (397), Expect = 5e-37, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
+ L +YP ICP + ++ +C CW + FIT + D
Sbjct: 14 NILSKFTERLLTILYPPICPGCKQRVSAYGTICSECWKDLQFITKPYCPVMGVPFVYDMG 73
Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++Q LP +++RSV ++ ++ LV LKY D +LA MA WM +I
Sbjct: 74 DGFLSGEALQNSLPFSRVRSVIVHKGVAQSLVTRLKYGDHVELASFMANWMVSAGREI 131
>gi|153008363|ref|YP_001369578.1| competence protein F [Ochrobactrum anthropi ATCC 49188]
gi|151560251|gb|ABS13749.1| competence protein F, putative [Ochrobactrum anthropi ATCC 49188]
Length = 262
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
++P C ++ LC CW ++ FI + + D
Sbjct: 23 AGRAFRSSADMLFPPTCIGCRAHVSEPGTLCPKCWPELRFIERPYCPVLGIPFSHDFGDN 82
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++ P ++RS L+ + + LK+HDRTDLA MA+WM R ++
Sbjct: 83 FTSAEAIADPPPFRRLRSAVLHRGAAQRMAVSLKFHDRTDLAPWMARWMQRAGREL 138
>gi|319781332|ref|YP_004140808.1| phosphoribosyltransferase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167220|gb|ADV10758.1| phosphoribosyltransferase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 266
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
I +S++ ++P +C R ++ LCG CW K+ + +
Sbjct: 12 GITNLARSVVGWPARMLFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTH 71
Query: 63 DKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+++ P + R+ Y ++ +V+ LKY DRTDLA MA+WM R
Sbjct: 72 HMGEGFLSAEAIADPPPFERARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMMRAGAD 131
Query: 119 I 119
+
Sbjct: 132 L 132
>gi|319408180|emb|CBI81833.1| competence protein ComF [Bartonella schoenbuchensis R1]
Length = 247
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+ I L +YP CP +I++ +C CW FIT + D
Sbjct: 1 MGKFIESLIKILYPPTCPGCKKIVSAYSTVCSDCWKDFQFITKPYCPVMGIPFAYDMGEG 60
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++Q P +++RSV ++ ++ +L LKY DR +LA M+ WM ++
Sbjct: 61 FLSGEAIQASPPFSRVRSVVVHKGLARLLTIQLKYSDRLELARFMSNWMVLAGREL 116
>gi|260467149|ref|ZP_05813327.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259029073|gb|EEW30371.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 266
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
+S + ++P +C R ++ LCG CW K+ + +
Sbjct: 15 SLARSALGWPARILFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTHQMG 74
Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++ P + R+ Y ++ +V+ LKY DRTDLA MA+WM R +
Sbjct: 75 EGFLSAEAIADPPPFDRARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMVRAGADL 132
>gi|163867840|ref|YP_001609044.1| competence protein ComF [Bartonella tribocorum CIP 105476]
gi|161017491|emb|CAK01049.1| competence protein ComF [Bartonella tribocorum CIP 105476]
Length = 261
Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----P 66
I +YP ICP + ++ +C CW + FIT + D
Sbjct: 18 FIERFKTMLYPPICPGCKQNVSTYGTICSECWKDLQFITKPYCPVMGTPFVCDMGDGFLS 77
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++++ P +++RSV ++ ++ LV LKY D +LA MA WM ++
Sbjct: 78 GEALRSSYPFSRVRSVIVHKGLARTLVTRLKYGDHIELASFMANWMVSAGREV 130
>gi|49473949|ref|YP_031991.1| competence protein comF [Bartonella quintana str. Toulouse]
gi|49239452|emb|CAF25803.1| Competence protein comF [Bartonella quintana str. Toulouse]
Length = 261
Score = 153 bits (387), Expect = 8e-36, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+ I L +YP ICP + ++ +C CW + FIT + D
Sbjct: 15 LNKCIECLLTILYPPICPGCKQKVSAYGAICSQCWKDLQFITKPYCPVMGIPFGCDMGDG 74
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++Q P +++RS ++ ++ LV LKY D +L MA WM +I
Sbjct: 75 FLSGEALQNLPPFSRVRSAIVHKGVAQALVTRLKYGDHIELVSFMANWMVFAGREI 130
>gi|240850049|ref|YP_002971442.1| competence protein ComF [Bartonella grahamii as4aup]
gi|240267172|gb|ACS50760.1| competence protein ComF [Bartonella grahamii as4aup]
Length = 261
Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+ I L +YP ICP + ++ +C CW + FIT + D
Sbjct: 15 LSKFIERLKTVLYPPICPGCKQNVSTYGTICSECWKDLQFITKPYCPVMGTPFVCDMGDG 74
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++++ P +++RS ++ ++ LV LKY D +LA MA WM ++
Sbjct: 75 FLSGEALRNSHPFSRVRSAIVHKGLARALVTRLKYGDHIELASFMANWMMFAGREV 130
>gi|121601823|ref|YP_988686.1| comF family protein [Bartonella bacilliformis KC583]
gi|120614000|gb|ABM44601.1| comF family protein [Bartonella bacilliformis KC583]
Length = 251
Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+ I L +YP CP I++ +C CW + FIT + D
Sbjct: 5 LGKFIKRLMAVVYPPTCPGCKVIVSAHGTICADCWKDLQFITKPYCPIMGIPFACDMGDG 64
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+++Q P +++RS + ++ L LKY DR +LA MA WM +
Sbjct: 65 FLSGEALQTSYPFSRVRSAIAHKGLARTLTIRLKYGDRVELAQFMANWMVFAGRE 119
>gi|126738463|ref|ZP_01754168.1| competence protein F, putative [Roseobacter sp. SK209-2-6]
gi|126720262|gb|EBA16968.1| competence protein F, putative [Roseobacter sp. SK209-2-6]
Length = 242
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNI 62
+++ IYP C ++ F LCG CW + HFI+ T L D
Sbjct: 2 LRAQFQTAVSLIYPPRCLGCDELVEQDFGLCGTCWGQTHFISGTVCEGCGIPLPGEGDGY 61
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + M P +Q R+ LY D + LV LK+ DRTDLA A W+ R +
Sbjct: 62 HLECDECMSTPRPWSQGRAAMLYKDKARSLVMALKHGDRTDLAAPAAHWIERAAGPL 118
>gi|190893598|ref|YP_001980140.1| competence protein F (phosphoribosyltransferase) [Rhizobium etli
CIAT 652]
gi|190698877|gb|ACE92962.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli CIAT 652]
Length = 258
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
Q ++ L +YP C + LC CW+ I FI + + D
Sbjct: 14 RTQLLRPFSA-LADFLYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHD 72
Query: 64 KDPL----KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+++ P ++RS + LV LKY DRTDLA MMA WM R +
Sbjct: 73 LGAGIVSAEAIANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 131
>gi|327193402|gb|EGE60302.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli CNPAF512]
Length = 258
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
Q ++ L +YP C + LC CW+ I FI + + D
Sbjct: 14 RTQLLRPFSA-LADFLYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHD 72
Query: 64 KDPL----KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+++ K P ++RS + LV LKY DRTDLA MMA WM R +
Sbjct: 73 LGAGILSAEAIAKPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 131
>gi|114704317|ref|ZP_01437225.1| hypothetical protein FP2506_05271 [Fulvimarina pelagi HTCC2506]
gi|114539102|gb|EAU42222.1| hypothetical protein FP2506_05271 [Fulvimarina pelagi HTCC2506]
Length = 249
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
Q +++ + ++P IC I LC CWS++ FI + + D
Sbjct: 6 QRTLTLLRLIGDLLFPPICTSCGIGIGKPAGLCSSCWSELRFIERPFCDILCLPFSYDPG 65
Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
K++ P ++RSV LY D + LV LKY DR DL +MA WM R I
Sbjct: 66 EGVVSAKAIAHPPPFEKLRSVVLYDDRARRLVSALKYRDRLDLVPLMAAWMVRAGRDI 123
>gi|86359347|ref|YP_471239.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli CFN 42]
gi|86283449|gb|ABC92512.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli CFN 42]
Length = 258
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSM 70
L +YP C + LC CWS I FI + + D +++
Sbjct: 24 LADFLYPPACSVCGISTGGHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAI 83
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
P ++RS + LV LKY DRTDLA MMA WM R +
Sbjct: 84 ANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 131
>gi|209551108|ref|YP_002283025.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209536864|gb|ACI56799.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 258
Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
Q ++ L +YP C + +C CWS I FI + + D
Sbjct: 14 RAQLLRPFSA-LADFLYPPACSVCGISTGGHRGVCAKCWSGIRFIERPYCEVLGIPFSHD 72
Query: 64 KDPL----KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+++ P ++RS + LV LKY DRTDLA MMA WM R +
Sbjct: 73 LGAGILSAEAIANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAAWMLRASDG 131
>gi|260431723|ref|ZP_05785694.1| competence protein F [Silicibacter lacuscaerulensis ITI-1157]
gi|260415551|gb|EEX08810.1| competence protein F [Silicibacter lacuscaerulensis ITI-1157]
Length = 254
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDK 64
I +YP C + F LCG CW + FI L D
Sbjct: 15 RRIQTAIEVVYPPRCIGCGELTESDFGLCGPCWRETPFIGGLVCASCGVPLPGEDDGHRI 74
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ M++ P ++ R LY + LV K+ DRT+LA A+WM R + +
Sbjct: 75 ECDDCMRQPPPWSEGRGALLYKGKARALVLAFKHGDRTELARPAARWMARAGQSL 129
>gi|241206509|ref|YP_002977605.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240860399|gb|ACS58066.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 258
Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSM 70
L YP C + LC CWS I FI + D +++
Sbjct: 24 LADFFYPPACSVCGISTGGHRGLCAKCWSGIRFIERPYCEVLGIPFLHDLGAGILSAEAI 83
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
P ++RS + LV LKY DRTDLA MMA WM R +
Sbjct: 84 ANPPPFDRLRSAATHDRAVRDLVHGLKYRDRTDLAPMMAAWMLRASDG 131
>gi|13472985|ref|NP_104552.1| hypothetical protein mll3453 [Mesorhizobium loti MAFF303099]
gi|14023733|dbj|BAB50338.1| mll3453 [Mesorhizobium loti MAFF303099]
Length = 240
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKD 73
++P +C R ++ LCG CW K+ + + +++
Sbjct: 1 MLFPPVCAGCRRHVSQPGVLCGACWPKLRLLERPWCPVMGTPFTHHMGEGFLSAEAIADP 60
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + R+ Y ++ +V+ LKY DRTDLA MA+WM R +
Sbjct: 61 PPFERARAAVAYSGVARQMVQGLKYQDRTDLAPWMARWMVRAGADL 106
>gi|159185776|ref|NP_357098.2| competence protein F [Agrobacterium tumefaciens str. C58]
gi|159140910|gb|AAK89883.2| competence protein F [Agrobacterium tumefaciens str. C58]
Length = 263
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+ +++ F +YP C +R+ LC CW + FI + D
Sbjct: 18 VPSAARAVARSFFRLVYPPTCAGCNRMTGGEGALCPDCWRDVAFIDRPFCEVLGIPFARD 77
Query: 64 KD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+++ P ++RSV + + LV LKY DRTDLA ++A WM R +
Sbjct: 78 HGEGVVSGRAIADPPPFDRLRSVASHEGTARKLVHRLKYQDRTDLARLIALWMLRASDG 136
>gi|163737955|ref|ZP_02145371.1| competence protein F, putative [Phaeobacter gallaeciensis BS107]
gi|161388571|gb|EDQ12924.1| competence protein F, putative [Phaeobacter gallaeciensis BS107]
Length = 242
Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNI 62
+K+ I IYP C ++ F LCG CW FI+ T L D
Sbjct: 2 LKARIQTAVSLIYPPRCLACGDWVDSDFGLCGPCWRDTPFISGTCCDGCGVALMGEGDGF 61
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ M P Q R+ Y + L+ LK+ DRT++A A+W+ R +
Sbjct: 62 RLECDDCMAHPRPWQQGRAALSYEGTARRLILALKHGDRTEIARPAARWLTRAAATL 118
>gi|218462813|ref|ZP_03502904.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli Kim 5]
Length = 169
Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
Q ++ L +YP C + LC CWS I FI + + D
Sbjct: 14 RTQFLRPFSA-LVDFLYPPTCSVCGVSAGGHRGLCAKCWSGIRFIERPYCEVLGIPFSHD 72
Query: 64 KDPL----KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+++ P ++RS + LV LKY DRTDLA MMA WM R +
Sbjct: 73 LGAGILSAEAIANPPPFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 131
>gi|110635335|ref|YP_675543.1| phosphoribosyltransferase [Mesorhizobium sp. BNC1]
gi|110286319|gb|ABG64378.1| phosphoribosyltransferase [Chelativorans sp. BNC1]
Length = 270
Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
M A Q I + P +C ++ LC CW ++ F+ +
Sbjct: 14 MGAFRQAATMIREWPARLLSPPVCIGCRNLVTAPGTLCPECWPELRFLEQPWCPVMGTPF 73
Query: 61 NIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
D +++ P + RS Y ++ +V LK+ DRTDLA MA+WM R
Sbjct: 74 PHDMGEGFLSGEAIANPPPFARARSAVAYRGVAGRMVLSLKFSDRTDLAPWMARWMLRAA 133
Query: 117 EKI 119
++
Sbjct: 134 VEL 136
>gi|86136799|ref|ZP_01055377.1| competence protein F, putative [Roseobacter sp. MED193]
gi|85826123|gb|EAQ46320.1| competence protein F, putative [Roseobacter sp. MED193]
Length = 242
Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNI 62
+++ +YP C + F LCG CW + HFI+ T L ++D
Sbjct: 2 LRAQFQTAVSLVYPPKCLGCDEFVEQDFGLCGGCWGEAHFISGTVCEGCGVPLPGDEDGY 61
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
D + M P +Q R+ LY D + LV LK+ DRTDLA A W+ R +
Sbjct: 62 RLDCDECMSMSRPWSQGRAAMLYKDKARNLVMALKHGDRTDLAAPAAGWIERAAAPL 118
>gi|254464782|ref|ZP_05078193.1| competence protein F [Rhodobacterales bacterium Y4I]
gi|206685690|gb|EDZ46172.1| competence protein F [Rhodobacterales bacterium Y4I]
Length = 242
Score = 143 bits (362), Expect = 5e-33, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
I IYP C ++ F LCG CWS + FI+ T L D +
Sbjct: 6 IQTAVSLIYPPQCMGCGGLVGSDFGLCGTCWSGMSFISGTVCEGCGVPLPGEADGFRLEC 65
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ P +Q RS +Y LV LK+ DRT++A A W+ R + +
Sbjct: 66 DSCLRHPRPWSQGRSALIYEGQGRKLVLALKHGDRTEIAQTAAVWLERAAQPM 118
>gi|304394136|ref|ZP_07376059.1| competence protein F [Ahrensia sp. R2A130]
gi|303293576|gb|EFL87953.1| competence protein F [Ahrensia sp. R2A130]
Length = 273
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQK 72
I+P++C R ++ + LC CW ++ FI + + D +++
Sbjct: 35 DAIWPAVCLACERPVDKQGSLCPTCWGEMRFIERPYCAVMGSPFTYDLGEGALSAEAIAD 94
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + RSV LY D++ +V LK+ DRT+LA MAQWM R + +
Sbjct: 95 PPPFDRCRSVVLYDDVARRMVSSLKFSDRTELAPWMAQWMVRASDGM 141
>gi|90420200|ref|ZP_01228108.1| competence protein F [Aurantimonas manganoxydans SI85-9A1]
gi|90335534|gb|EAS49284.1| competence protein F [Aurantimonas manganoxydans SI85-9A1]
Length = 249
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---- 65
+I + ++P +CP + +C CW K+ FI + D
Sbjct: 10 AITGSIGRLLFPPVCPGCQAAVTGSGTVCCACWPKLRFIERPYCEVLGLPFAYDLGKGFL 69
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++ + P ++R+ LY D++ LV LKY DRTDL +MA WM R ++
Sbjct: 70 SAEAIAEPPPFARLRAAVLYEDLAARLVSSLKYADRTDLVPLMAGWMTRAGAEL 123
>gi|116254026|ref|YP_769864.1| hypothetical protein RL4290 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258674|emb|CAK09778.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 246
Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSM 70
L YP C + + LC CWS I FI + + D +++
Sbjct: 12 LADFFYPPACSVCGISTGVHRGLCAKCWSGIRFIERPYCEVLGIPFSHDLGAGILSAEAI 71
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
++RS + LV LKY DRTDLA MMA WM R +
Sbjct: 72 ANPPAFDRLRSAATHDHAVRDLVHGLKYRDRTDLAPMMAAWMLRASDG 119
>gi|222149922|ref|YP_002550879.1| competence protein F [Agrobacterium vitis S4]
gi|221736904|gb|ACM37867.1| competence protein F [Agrobacterium vitis S4]
Length = 236
Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSM 70
L +YP C + LC CW + FI + D +++
Sbjct: 2 LRDLVYPPGCATCGLPVAKAGSLCSDCWCSVRFIERPYCEILGLPFGFDPGQGMVCAEAI 61
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
++R+ ++ + LV LKY DRTDLA MMA WM R
Sbjct: 62 ANPPVFDRLRAAVVHDGAARDLVHRLKYGDRTDLAPMMAHWMIRAG 107
>gi|15966372|ref|NP_386725.1| hypothetical protein SMc02444 [Sinorhizobium meliloti 1021]
gi|307313041|ref|ZP_07592668.1| phosphoribosyltransferase [Sinorhizobium meliloti BL225C]
gi|307321047|ref|ZP_07600453.1| phosphoribosyltransferase [Sinorhizobium meliloti AK83]
gi|15075643|emb|CAC47198.1| Putative competence protein F [Sinorhizobium meliloti 1021]
gi|306893322|gb|EFN24102.1| phosphoribosyltransferase [Sinorhizobium meliloti AK83]
gi|306899360|gb|EFN29994.1| phosphoribosyltransferase [Sinorhizobium meliloti BL225C]
Length = 248
Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
++ I + I+P +C R+ +C CW+ + FI + D
Sbjct: 7 LRRISAQAVDLIFPPVCSGCGRLTGYAHAVCASCWAGMPFIERPYCEVLGLPFAYDPGES 66
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+++ ++RSV ++ + LV LKY DRTDLA MMA+WM R +
Sbjct: 67 AVSPEAIANPPVFDRLRSVAIHEGIVRDLVHGLKYRDRTDLAPMMAEWMIRASDG 121
>gi|227823196|ref|YP_002827168.1| putative competence protein F [Sinorhizobium fredii NGR234]
gi|227342197|gb|ACP26415.1| putative competence protein F [Sinorhizobium fredii NGR234]
Length = 281
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSM 70
+ ++P +C R+ +C CW+ + I + + D P +++
Sbjct: 47 AVNLVFPPVCCGCGRLTGDAHAVCPSCWAGLRLIERPYCEILGSPFAFDPGPGAVSPQAI 106
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
++RS +L+ ++ LV LKY DRTDLA MMA+WM R +
Sbjct: 107 ANPPDFDRLRSASLHEGIARDLVHGLKYRDRTDLAPMMAEWMIRASDG 154
>gi|259418155|ref|ZP_05742074.1| competence protein F [Silicibacter sp. TrichCH4B]
gi|259347061|gb|EEW58875.1| competence protein F [Silicibacter sp. TrichCH4B]
Length = 243
Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDN 61
T+++ I +YP+ C ++ F LC CW FI+ L D
Sbjct: 2 TLRARIQTAVSLVYPARCLNCGGLVESDFGLCSACWRDTTFISGLVCDCCGVPLPGEADG 61
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + Q R+ LY LV LK+ DRTDLA + WM R +
Sbjct: 62 QSVHCDECLSSPRDWEQGRAAILYGGQGRRLVLALKHGDRTDLARPASGWMARAARDL 119
>gi|56694999|ref|YP_165345.1| competence protein F, putative [Ruegeria pomeroyi DSS-3]
gi|56676736|gb|AAV93402.1| competence protein F, putative [Ruegeria pomeroyi DSS-3]
Length = 242
Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
I +YP C ++ F LCG CW FI T L +D +
Sbjct: 5 IQTAIETVYPPRCLGCGDLVTSDFGLCGKCWRDTPFIDGTVCDSCGAPLPGARDGHRIEC 64
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
M P + R+ LY + +V LK+ DR +LA WM R +
Sbjct: 65 DDCMAHPRPWSDGRAALLYTGRARRMVLALKHGDRPELARPGGLWMARAAAPL 117
>gi|150397708|ref|YP_001328175.1| phosphoribosyltransferase [Sinorhizobium medicae WSM419]
gi|150029223|gb|ABR61340.1| phosphoribosyltransferase [Sinorhizobium medicae WSM419]
Length = 258
Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+ ++ + + ++P +C R+ +C CW+KI I +
Sbjct: 10 IRDRAGPLRRLAALAINLVFPPVCCGCGRLTGDARAVCPSCWAKIPLIERPYCEVLGMPF 69
Query: 61 NIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
D +++ ++RS ++ + LV LKY DRTDLA MMA+WM R
Sbjct: 70 TFDPGEGAVSPEAIANPPVFDRLRSAAIHEGIVRDLVHGLKYRDRTDLAPMMAEWMIR 127
>gi|126724616|ref|ZP_01740459.1| Competence protein F [Rhodobacterales bacterium HTCC2150]
gi|126705780|gb|EBA04870.1| Competence protein F [Rhodobacterales bacterium HTCC2150]
Length = 240
Score = 136 bits (344), Expect = 6e-31, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA-------TEHILKNNKDNIDK 64
+ IYP+ C I++ F CG CW + FIT T ++ N +
Sbjct: 1 MQTALRIIYPAQCLTCGDIVDSEFGFCGACWRETPFITGLICDLCGTSLPGDASEQNQEL 60
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ M+ P + RS +Y D + V LK+ DR D A A W+ ++ +
Sbjct: 61 HCDECMRIARPWEKGRSAMIYKDNARRFVLGLKHGDRLDFARPAANWIAAKMQGL 115
>gi|254486071|ref|ZP_05099276.1| competence protein F [Roseobacter sp. GAI101]
gi|214042940|gb|EEB83578.1| competence protein F [Roseobacter sp. GAI101]
Length = 242
Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDK 64
S + IYP +C ++ + LCG CW + FI T L N
Sbjct: 3 SQLQTAVGLIYPPVCLGCNQPVEKTAGLCGPCWRETAFIGGTVCDRCGVPLPGNDVGEMA 62
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
M P Q RS LY + +V LK+ DR ++A A WM R + K
Sbjct: 63 HCDACMTDPPPWVQGRSALLYRGIGRKIVLGLKHGDRQEIARPAALWMARAVAK 116
>gi|255262559|ref|ZP_05341901.1| competence protein F [Thalassiobium sp. R2A62]
gi|255104894|gb|EET47568.1| competence protein F [Thalassiobium sp. R2A62]
Length = 239
Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK--- 68
+ +YP+ C ++ LCG CWS FIT D DP +
Sbjct: 1 MQSALRILYPTQCVSCDALVEGDTGLCGKCWSDTPFITGAVCGACGAPLIGDVDPEETAY 60
Query: 69 ---SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P R+ TLY + LV LK+ DRTDL ++QWM R +
Sbjct: 61 CEACHASPRPWLHGRAATLYSGNARRLVLALKHGDRTDLVPALSQWMARAAAPL 114
>gi|99082742|ref|YP_614896.1| competence protein F, putative [Ruegeria sp. TM1040]
gi|99039022|gb|ABF65634.1| competence protein F putative [Ruegeria sp. TM1040]
Length = 243
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDN 61
T+++ I +YP+ C ++ F LCG CW FI+ L D
Sbjct: 2 TLRARIQTAVSLVYPARCLNCGGLVESDFGLCGACWRDTTFISGLVCEGCGAPLPGEDDG 61
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ + R+ +Y LV LK+ DRTDL + WM R +
Sbjct: 62 QMVHCDACLRAPGEWDRGRAALVYTGQGRRLVLALKHGDRTDLVRPASAWMARAARVL 119
>gi|260576133|ref|ZP_05844126.1| competence protein F, putative [Rhodobacter sp. SW2]
gi|259021613|gb|EEW24916.1| competence protein F, putative [Rhodobacter sp. SW2]
Length = 240
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ H +YP C ++ F LC CW + FIT L
Sbjct: 3 LQAALHLVYPPQCLSCDALVTTDFGLCSKCWRETPFITGLVCDKCGTPLPGEDPGNAVHC 62
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P Q R+ LY LV LK+ DR DLA A WM + +
Sbjct: 63 DDCLTIARPWVQGRAALLYKGNGRRLVLALKHGDRLDLAKPAAGWMRQAAAPL 115
>gi|110677794|ref|YP_680801.1| competence protein F, putative [Roseobacter denitrificans OCh 114]
gi|109453910|gb|ABG30115.1| competence protein F, putative [Roseobacter denitrificans OCh 114]
Length = 243
Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+YP C + F LCG CW FI + L + N
Sbjct: 6 FQTAVSLVYPPRCLGCGGQVESDFGLCGGCWRDTPFIGGSICDSCGAPLPGDNHNECLKC 65
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
M ++ R+ LY D + LV LK+ DR ++A A WM R +E +
Sbjct: 66 DDCMITPRSWSKGRAALLYKDNARRLVLALKHGDRQEIAEPAALWMSRAIEDL 118
>gi|126734442|ref|ZP_01750189.1| Competence protein F [Roseobacter sp. CCS2]
gi|126717308|gb|EBA14172.1| Competence protein F [Roseobacter sp. CCS2]
Length = 240
Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ + IYP C LC CW FI L
Sbjct: 3 LQSVIRAIYPPQCVACDAQTEDDNGLCAVCWKDTQFIGGLVCNTCGTPLPGEDHGEVVQC 62
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
M P RSV +Y + LV LK+ DRTDLA A+WM + + +
Sbjct: 63 DDCMTIARPWDTGRSVLVYNGVGRRLVLGLKHGDRTDLAPTAARWMAQKMANL 115
>gi|84684631|ref|ZP_01012532.1| competence protein F, putative [Maritimibacter alkaliphilus
HTCC2654]
gi|84667610|gb|EAQ14079.1| competence protein F, putative [Rhodobacterales bacterium HTCC2654]
Length = 238
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHI-----LKNNKDNIDKDP 66
+ L IYP+ C I+ LCG CW + F+T L D
Sbjct: 1 MQSLLRAIYPAQCASCGEIVEGDGGLCGPCWRETRFVTGHVCDKCGVGLPGESDGHLDLC 60
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
M P +Q R+ Y LV K+ DR D+A A+W+ R + +
Sbjct: 61 DDCMTIARPWSQGRTALDYTGNGRRLVLAFKHADRPDIAEPAARWVARAAQPL 113
>gi|126730067|ref|ZP_01745879.1| Competence protein F [Sagittula stellata E-37]
gi|126709447|gb|EBA08501.1| Competence protein F [Sagittula stellata E-37]
Length = 237
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN----NKDNIDKDPL 67
+ L +YP C ++ F LCG CW + FIT + + +
Sbjct: 1 MQTLVQLVYPPRCLSCGGLVETDFGLCGACWRETRFITGLACDVCGAPLPGESGTVEHCD 60
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P R+ +Y D+ LV LK+ DR D+A A+WM RV +
Sbjct: 61 DCLTLARPWVGGRAALVYADVGRRLVLALKHGDRQDIAAPAAEWMARVSRDM 112
>gi|148258762|ref|YP_001243347.1| putative competence protein F (COMF) [Bradyrhizobium sp. BTAi1]
gi|146410935|gb|ABQ39441.1| putative competence protein F (COMF) [Bradyrhizobium sp. BTAi1]
Length = 267
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP---- 66
I P++C ++ +C CW K+ FI D P
Sbjct: 27 IAKLALDIALPTLCISCREPVDGE-GVCAACWGKLSFIERPYCPKLGIPFVYDPGPELLS 85
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++++ + R+ Y +++ LV LKY DRTDLA +M +WM R ++
Sbjct: 86 MEAIAAPPAYAKARAAVRYDEVARTLVHQLKYQDRTDLAPIMGRWMARAGREL 138
>gi|319406072|emb|CBI79702.1| competence protein ComF [Bartonella sp. AR 15-3]
Length = 225
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 30 IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPLTQIRSVTLY 85
+ + +C CW + FIT + D +++Q P + +RS ++
Sbjct: 1 MTSAYGTVCSDCWKDLQFITKPYCPVMGTPFAYDIGEKFLSGEAIQNPPPFSFLRSAVVH 60
Query: 86 CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ L LKY DR +LA MA WM +I
Sbjct: 61 KGLARTLATQLKYGDRLELASFMANWMMLAGREI 94
>gi|240136967|ref|YP_002961436.1| putative phosphoribosyltransferase [Methylobacterium extorquens
AM1]
gi|240006933|gb|ACS38159.1| putative phosphoribosyltransferase [Methylobacterium extorquens
AM1]
Length = 255
Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+PA+ ++ I L IYP C LC CWS + I
Sbjct: 6 LPALSGGIRRIASTLIGLIYPPTCVSCGAATGQPHALCATCWSGLRLIERPYCERLGTPF 65
Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+D + ++ + + R+V +Y + LV LKY+DR DLA MA+ M
Sbjct: 66 ALDLGVGRLLSPGAIAEPPAFGRARAVAVYDGTARDLVHRLKYNDRLDLARTMARMMASA 125
Query: 116 LEKI 119
++
Sbjct: 126 GREL 129
>gi|299132843|ref|ZP_07026038.1| phosphoribosyltransferase [Afipia sp. 1NLS2]
gi|298592980|gb|EFI53180.1| phosphoribosyltransferase [Afipia sp. 1NLS2]
Length = 266
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP-- 66
+ + P++C ++ LC CW+K+ FI D P
Sbjct: 24 RRVARLALDIALPTLCISCREPVSGE-GLCPACWAKLSFIAPPYCARLGIPFVYDPGPGL 82
Query: 67 --LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++++ + R+ Y D++ LV LKY DRTDLA M +WM R ++
Sbjct: 83 LSMEAIAAPPAYHRARAAVRYDDVAGTLVHALKYQDRTDLAPAMGRWMARAGAEL 137
>gi|27375320|ref|NP_766849.1| competence protein F [Bradyrhizobium japonicum USDA 110]
gi|27348456|dbj|BAC45474.1| competence protein F [Bradyrhizobium japonicum USDA 110]
Length = 265
Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL----KSMQK 72
P++C ++ +C CW+++ FI D P +++
Sbjct: 35 DIALPTLCVSCREPVDGE-GVCAACWARLSFIERPYCPRLGIPFVYDPGPDMLSMEAIAS 93
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ R+ Y D++ LV LKY DRTDLA M +WM R ++
Sbjct: 94 PPAYQRARAAVRYDDVARTLVHALKYQDRTDLAPAMGRWMARAGGEL 140
>gi|163849759|ref|YP_001637802.1| competence protein F [Methylobacterium extorquens PA1]
gi|163661364|gb|ABY28731.1| competence protein F [Methylobacterium extorquens PA1]
Length = 255
Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 5/124 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+PA+ ++ L IYP C LC CWS + I
Sbjct: 6 LPALSGGIRRFASTLIGLIYPPTCVSCGAATGQPHALCAACWSGLRLIERPYCERLGTPF 65
Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+D + ++ + + R+V +Y + LV LKY+DR DLA MA+ M
Sbjct: 66 ALDLGVGRLLSPGAIAEPPAFCRARAVAVYEGTARDLVHRLKYNDRLDLARTMARMMASA 125
Query: 116 LEKI 119
++
Sbjct: 126 GREL 129
>gi|39933674|ref|NP_945950.1| phosphoribosyltransferase [Rhodopseudomonas palustris CGA009]
gi|192289031|ref|YP_001989636.1| phosphoribosyltransferase [Rhodopseudomonas palustris TIE-1]
gi|39647520|emb|CAE26041.1| possible competence protein F (COMF) [Rhodopseudomonas palustris
CGA009]
gi|192282780|gb|ACE99160.1| phosphoribosyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 271
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP--- 66
P++C + +C CWS++ FI D P
Sbjct: 30 RATQAALDLALPTLCVACREPVAGE-GVCAQCWSQLSFIAPPYCEKLGIPFVYDPGPGML 88
Query: 67 -LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++++ ++ R+ Y +++ VLV LK+HDRTDLA M +WM R + +
Sbjct: 89 SMQAIADPPAYSRARAAVRYDEVAKVLVHGLKFHDRTDLAPTMGRWMARAGQPL 142
>gi|92116101|ref|YP_575830.1| phosphoribosyltransferase [Nitrobacter hamburgensis X14]
gi|91798995|gb|ABE61370.1| phosphoribosyltransferase [Nitrobacter hamburgensis X14]
Length = 270
Score = 130 bits (326), Expect = 8e-29, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+ A V P++C + +C CW+K+ FI
Sbjct: 20 LLACYGVVSHAARTALDVALPTLCVACREPVAG-VGVCADCWTKLSFIERPYCPRLGTPF 78
Query: 61 NIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
D ++++ + R+ Y D++ VLV LKY DRTDLA M +WM R
Sbjct: 79 VYDPGTNMLSMEAIANPPAYQRARAAVRYDDVAKVLVHALKYQDRTDLAPAMGRWMARAG 138
Query: 117 EKI 119
++
Sbjct: 139 TEL 141
>gi|85713804|ref|ZP_01044794.1| phosphoribosyltransferase [Nitrobacter sp. Nb-311A]
gi|85699708|gb|EAQ37575.1| phosphoribosyltransferase [Nitrobacter sp. Nb-311A]
Length = 269
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LK 68
P++C + +C CW+++ FI D ++
Sbjct: 31 RTALDIALPTLCVACREPVAGP-GVCADCWTQLSFIERPYCPRLGTPFVYDPGSEMLSME 89
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ + R+ Y D++ VLV LKY DRTDLA M +WM R ++
Sbjct: 90 AIANPPAYQRARAAVRYDDVAKVLVHALKYQDRTDLAPAMGRWMARAGSEL 140
>gi|218528400|ref|YP_002419216.1| competence protein F [Methylobacterium chloromethanicum CM4]
gi|218520703|gb|ACK81288.1| competence protein F [Methylobacterium chloromethanicum CM4]
Length = 255
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 5/122 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+PA+ ++ I L IYP C LC CWS + I
Sbjct: 6 LPALSGGIRRIASTLIGLIYPPTCVSCGAATGQPHALCAACWSGLRLIERPYCERLGTPF 65
Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+D + ++ + + R+V LY + LV LKY+DR DLA MA+ M
Sbjct: 66 ALDLGVGRLLSPGAIAEPPAFDRARAVALYEGTARDLVHRLKYNDRLDLARTMARMMASA 125
Query: 116 LE 117
Sbjct: 126 GR 127
>gi|75674583|ref|YP_317004.1| phosphoribosyltransferase [Nitrobacter winogradskyi Nb-255]
gi|74419453|gb|ABA03652.1| phosphoribosyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 271
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
+T+ P++C + +C CW+K+ FI D
Sbjct: 26 ETMSYAARTALDIALPTLCVACREPVAG-VGVCADCWTKLSFIERPYCPRLGTPFVYDPG 84
Query: 66 P----LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++++ + R+ Y D++ VLV LKY DRTDLA +M +WM R +
Sbjct: 85 SEMLSMEAIANPPAYQRARAAVRYDDVAKVLVHALKYQDRTDLAPVMGRWMARAGSGL 142
>gi|84514889|ref|ZP_01002252.1| competence protein F, putative [Loktanella vestfoldensis SKA53]
gi|84511048|gb|EAQ07502.1| competence protein F, putative [Loktanella vestfoldensis SKA53]
Length = 241
Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ + IYP+ C LCG CW + FI T L + D
Sbjct: 4 MQSVIRAIYPAQCVACETQTQAENGLCGTCWRETQFIDGTICDTCGAPLPGDSDGHRLQC 63
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
M P + R+ +Y + LV LK+ DRTDL WM R+ +
Sbjct: 64 DDCMAIARPWDRGRAALVYNGIGRKLVLGLKHGDRTDLVEPAGLWMARLARAL 116
>gi|83942062|ref|ZP_00954524.1| Competence protein F [Sulfitobacter sp. EE-36]
gi|83847882|gb|EAP85757.1| Competence protein F [Sulfitobacter sp. EE-36]
Length = 242
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 40/116 (34%), Gaps = 5/116 (4%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNI 62
++ + IYP C + LCG CW FI L +
Sbjct: 1 MRDQLQTAVALIYPPSCLACGAWVTAHGGLCGPCWRDTGFIEGVVCETCGIPLLGDLSET 60
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D + P R+ LY D LV LK+ DR D+A WM RV+
Sbjct: 61 DVRCDACLAAPPPWEHGRAALLYRDTGRRLVLALKHGDRQDIAKPAGHWMARVIAP 116
>gi|323139478|ref|ZP_08074526.1| phosphoribosyltransferase [Methylocystis sp. ATCC 49242]
gi|322395280|gb|EFX97833.1| phosphoribosyltransferase [Methylocystis sp. ATCC 49242]
Length = 254
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 6/125 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+ + + L +YP C + + + LC CWS I FI
Sbjct: 5 LGGLPDLARRAGAALLDLVYPPSCLVCRKAVAQNGALCAACWSDIAFIERPFCERLGTPF 64
Query: 61 NIDKD-----PLKSMQKDLPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
D D ++ + R+V Y D + L LKY+DR +LA M +WM R
Sbjct: 65 ERDLDQPGLISPEAAANPPVFHRARAVARYDSDKARSLAHRLKYYDRLELAGPMGRWMAR 124
Query: 115 VLEKI 119
I
Sbjct: 125 AGADI 129
>gi|221640691|ref|YP_002526953.1| Competence protein F [Rhodobacter sphaeroides KD131]
gi|221161472|gb|ACM02452.1| Competence protein F [Rhodobacter sphaeroides KD131]
Length = 240
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 39/113 (34%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ ++P C + + F LCG CW FI L
Sbjct: 3 LQAALRLLFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDLCGAPLPGEDPGHPVRC 62
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P + R+ LY D L LK+ DR DLA +A W+ R I
Sbjct: 63 DDCLSSARPWDRGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115
>gi|188579651|ref|YP_001923096.1| competence protein F [Methylobacterium populi BJ001]
gi|179343149|gb|ACB78561.1| competence protein F [Methylobacterium populi BJ001]
Length = 255
Score = 127 bits (320), Expect = 4e-28, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 5/124 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+PA+ V+ + +YP C LC CW + I
Sbjct: 6 LPAVRDGVRRLASAAIGLVYPPTCVACGGATGQPHALCAACWRGLRLIERPYCERLGTPF 65
Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+D ++ + + R+V +Y + LV LKY DR DLA M + M
Sbjct: 66 ALDLGIGSLLSPGAIAEPPVFGRARAVAIYDGTARDLVHRLKYGDRLDLARTMGRMMASA 125
Query: 116 LEKI 119
++
Sbjct: 126 GREV 129
>gi|220921700|ref|YP_002497001.1| phosphoribosyltransferase [Methylobacterium nodulans ORS 2060]
gi|219946306|gb|ACL56698.1| phosphoribosyltransferase [Methylobacterium nodulans ORS 2060]
Length = 264
Score = 126 bits (318), Expect = 7e-28, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
MP+ + V S + L IYP C LC CW + FI
Sbjct: 1 MPSFHRPVLSALEALVGLIYPPSCIACGAATGTPHALCPACWRGMRFIEPPYCERLGTPF 60
Query: 61 NIDKD-----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+D +M + R+ Y D + LV LKY DR DLA + M R
Sbjct: 61 AVDLGVPGLLSPAAMADPPVFARARAAVRYDDAARRLVHRLKYEDRLDLAAALGGMMARA 120
Query: 116 LEKI 119
+
Sbjct: 121 GSGL 124
>gi|126463616|ref|YP_001044730.1| competence protein F [Rhodobacter sphaeroides ATCC 17029]
gi|126105280|gb|ABN77958.1| competence protein F [Rhodobacter sphaeroides ATCC 17029]
Length = 240
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 38/113 (33%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ ++P C + + F LCG CW FI L
Sbjct: 3 LQAALRLLFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDRCGAPLPGEDPGHPVRC 62
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P R+ LY D L LK+ DR DLA +A W+ R I
Sbjct: 63 DDCLSSARPWDHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115
>gi|146278666|ref|YP_001168825.1| amidophosphoribosyltransferase-like protein [Rhodobacter
sphaeroides ATCC 17025]
gi|145556907|gb|ABP71520.1| amidophosphoribosyltransferase-like protein [Rhodobacter
sphaeroides ATCC 17025]
Length = 240
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDP 66
+ ++P C + ++ F LCG CW F+ L
Sbjct: 3 LQAALRLLFPPQCLLCETLVTTDFGLCGPCWRATPFVAGLVCDLCGCPLPGEDPGHPVHC 62
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + P Q R+ LY D + LV LK+ DR DL A W+ V +
Sbjct: 63 DECLTSARPWDQGRAAMLYRDNARKLVLALKHGDRLDLVRPAAGWILGVARPL 115
>gi|316932065|ref|YP_004107047.1| phosphoribosyltransferase [Rhodopseudomonas palustris DX-1]
gi|315599779|gb|ADU42314.1| phosphoribosyltransferase [Rhodopseudomonas palustris DX-1]
Length = 271
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP--- 66
+ P++C + LC CWS++ FI D P
Sbjct: 30 RAAQAVLDLALPTLCVACREPVAGD-GLCARCWSQLSFIAPPYCEKLGIPFVYDPGPGML 88
Query: 67 -LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++++ ++ R+ Y +++ LV LK+HDRTDLA M +WM R +
Sbjct: 89 SMQAIADPPAYSRARAAVRYDEIAKALVHGLKFHDRTDLAPTMGRWMARAGAPL 142
>gi|77464774|ref|YP_354278.1| competence protein F [Rhodobacter sphaeroides 2.4.1]
gi|77389192|gb|ABA80377.1| Competence protein F [Rhodobacter sphaeroides 2.4.1]
Length = 240
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 38/113 (33%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ ++P C + + F LCG CW FI L
Sbjct: 3 LQAALRLLFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDLCGAPLPGEDPGHPVRC 62
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P R+ LY D L LK+ DR DLA +A W+ R I
Sbjct: 63 DDCLSSARPWDHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWILRAARPI 115
>gi|254558820|ref|YP_003065915.1| phosphoribosyltransferase [Methylobacterium extorquens DM4]
gi|254266098|emb|CAX21850.1| putative phosphoribosyltransferase [Methylobacterium extorquens
DM4]
Length = 255
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 5/122 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+PA+ ++ I L IYP C LC CWS + I
Sbjct: 6 LPALSGGIRRIASTLIGLIYPPTCVSCGAATGRPHALCAACWSGLRLIERPYCERLGTPF 65
Query: 61 NIDKDPLK-----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+D + ++ + + R+V +Y + LV LKY+DR DLA MA+ M
Sbjct: 66 ALDLGVGRLLSPGAITEPPAFGRARAVAVYEGTARDLVHRLKYNDRLDLARTMARMMASA 125
Query: 116 LE 117
Sbjct: 126 GR 127
>gi|332559669|ref|ZP_08413991.1| competence protein F [Rhodobacter sphaeroides WS8N]
gi|332277381|gb|EGJ22696.1| competence protein F [Rhodobacter sphaeroides WS8N]
Length = 240
Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 39/113 (34%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ ++P C + + F LCG CW FI L
Sbjct: 3 LQAALRLLFPPQCLLCETQVTTEFGLCGACWRDTPFIAGLVCDLCGAPLPGEDPGHPVRC 62
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P R+ LY D L LK+ DR DLA +A W+FR I
Sbjct: 63 DDCLSSARPWAHGRAALLYRDNGRKLALALKHGDRLDLARPLAGWIFRAARPI 115
>gi|85706922|ref|ZP_01038012.1| competence protein F, putative [Roseovarius sp. 217]
gi|85668533|gb|EAQ23404.1| competence protein F, putative [Roseovarius sp. 217]
Length = 232
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDPLKSMQK 72
IYP C + ++ F LCG CW FI+ L + + ++
Sbjct: 1 MIYPPRCTLCGAVVESDFGLCGPCWRDTPFISGLVCDTCGVPLPGEVHAGAEHCDECLRI 60
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P ++ R+ Y + LV +LK+ DR D+ A+WM R + +
Sbjct: 61 ARPWSEGRAAMRYHENGRKLVLMLKHGDRHDVVRPAAKWMARAAQPL 107
>gi|149204345|ref|ZP_01881312.1| competence protein F, putative [Roseovarius sp. TM1035]
gi|149142230|gb|EDM30277.1| competence protein F, putative [Roseovarius sp. TM1035]
Length = 232
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDPLKSMQK 72
+YP+ C + +++ F LCG CW FI+ L ++
Sbjct: 1 MVYPARCTLCGAVVDSDFGLCGPCWRDTPFISGLVCETCGVPLPGEGHAEAAHCDDCLRM 60
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P +Q R+ Y + L+ +LK+ DR D+ A+WM R + +
Sbjct: 61 ARPWSQGRAAIRYHENGRKLILMLKHGDRHDVVRPAAKWMARAAQPL 107
>gi|209883247|ref|YP_002287104.1| phosphoribosyltransferase [Oligotropha carboxidovorans OM5]
gi|209871443|gb|ACI91239.1| phosphoribosyltransferase [Oligotropha carboxidovorans OM5]
Length = 278
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LK 68
P+ C + LC CWSK+ FI D P ++
Sbjct: 40 RLALDVALPTQCLACREPVAGE-GLCPACWSKLSFIAPPYCARLGIPFVYDPGPGVLSME 98
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ + R+ Y +++ LV LKY DRTDLA M +WM R ++
Sbjct: 99 AIAAPPAYHRARAAVRYDEVAKTLVHALKYEDRTDLAPTMGRWMTRAGTEL 149
>gi|84500737|ref|ZP_00998986.1| competence protein F, putative [Oceanicola batsensis HTCC2597]
gi|84391690|gb|EAQ04022.1| competence protein F, putative [Oceanicola batsensis HTCC2597]
Length = 244
Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 5/118 (4%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDN 61
+ S++ +YP C ++ LCG CW FI A+ L +
Sbjct: 2 RLASVLQTALRLVYPPTCLTCDALVEADHGLCGTCWGATPFIGASVCGLCGAPLPGDHVA 61
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + P R+ +Y D + LV LK+ DR D+A + WM +
Sbjct: 62 AGDLCDDCLTTERPWDAGRAALVYRDNARRLVLGLKHGDRMDIARPASLWMAGAAGDM 119
>gi|254436580|ref|ZP_05050074.1| hypothetical protein OA307_1450 [Octadecabacter antarcticus 307]
gi|198252026|gb|EDY76340.1| hypothetical protein OA307_1450 [Octadecabacter antarcticus 307]
Length = 239
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 6/114 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN------NKDNIDKD 65
+ L +YP C + + F LCG CW++ FI +
Sbjct: 1 MQSLIQILYPPQCVMCEARTEVDFALCGRCWAETPFIDGLCCDECGSPLPGQGEPEFGIL 60
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
M P ++ R+ +Y D + LV LK+ DRTDLA W+ R +
Sbjct: 61 CDDCMVIARPWSKGRAAMIYKDKARRLVLSLKHGDRTDLARAAGPWLARAAGPL 114
>gi|159046040|ref|YP_001534834.1| competence protein F [Dinoroseobacter shibae DFL 12]
gi|157913800|gb|ABV95233.1| competence protein F [Dinoroseobacter shibae DFL 12]
Length = 258
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----P 66
+ +YP C + F LCG C + FI +
Sbjct: 6 LQTALRTVYPPSCITCRAPVASDFGLCGECLRQTPFIAGGICNTCGVPVAGLSETETDIC 65
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P ++ R+V Y DM LV LK+ DRTDLA W+ R +
Sbjct: 66 EDCLNIPRPWSRGRAVMTYQDMGRTLVLQLKHSDRTDLARPAGAWLARAARPL 118
>gi|254453222|ref|ZP_05066659.1| competence protein F [Octadecabacter antarcticus 238]
gi|198267628|gb|EDY91898.1| competence protein F [Octadecabacter antarcticus 238]
Length = 239
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------ 65
+ L YPS C + + F LCG CW++ FI + +
Sbjct: 1 MQSLIKIFYPSQCVMCEARTEVDFALCGPCWAETPFIDGLCCDGCGSPLPGQGEPEAGIL 60
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
M P ++ R+ +Y + + LV LK+ DRTDL W+ R + +
Sbjct: 61 CDDCMVVARPWSKGRAAMIYKEKARRLVLSLKHGDRTDLTRAAGPWLARAAKPL 114
>gi|89052786|ref|YP_508237.1| competence protein F, putative [Jannaschia sp. CCS1]
gi|88862335|gb|ABD53212.1| competence protein F putative [Jannaschia sp. CCS1]
Length = 242
Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 7/115 (6%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN-------NKDNIDK 64
+ + H ++P C S + F +CG CW FI L +
Sbjct: 3 LQTMLHAVFPPECLNCSARVEDAFAICGSCWGDTPFILGAACDLCGTGLPGQTAAEGEAL 62
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + R+V Y + LV LK+ DRTD+A WM R +
Sbjct: 63 ICGECQRVPRAWDHARAVFSYEGVGRKLVLALKHGDRTDIARAAGPWMARAAADL 117
>gi|163745080|ref|ZP_02152440.1| competence protein F, putative [Oceanibulbus indolifex HEL-45]
gi|161381898|gb|EDQ06307.1| competence protein F, putative [Oceanibulbus indolifex HEL-45]
Length = 220
Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 30 IINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTL 84
+++ F LCG CW FI T L D + P TQ R+ +
Sbjct: 1 MVDADFGLCGTCWRDTGFIGGTVCDACGVPLPGGGDLASPHCDACLVTPRPWTQGRAALI 60
Query: 85 YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Y DM LV LK+ DR ++A A+W+ + I
Sbjct: 61 YRDMGRKLVLALKHGDRQEIARPAARWLVHAAQDI 95
>gi|158425919|ref|YP_001527211.1| competence protein F [Azorhizobium caulinodans ORS 571]
gi|158332808|dbj|BAF90293.1| competence protein F [Azorhizobium caulinodans ORS 571]
Length = 264
Score = 116 bits (292), Expect = 7e-25, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLK 68
L P C I+ LC CW + I + ++
Sbjct: 29 RVLLDLALPPTCIACKAIVGTPGTLCAACWRDLRLIERPYCERLGTPFPFEDGATRLSVE 88
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ + R+ TL+ +S LV LKY DR DLA+ MA+ M R +
Sbjct: 89 AVTDPPAFDRARAATLFGPVSQDLVHGLKYADRMDLALPMARLMARAGADL 139
>gi|315122266|ref|YP_004062755.1| competence protein F, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495668|gb|ADR52267.1| competence protein F, putative [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 214
Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats.
Identities = 55/90 (61%), Positives = 73/90 (81%)
Query: 30 IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89
+I+ RFCLC CWSKI+FI++ L+N + I++ PL+ +++DL L IRSV +YCD+S
Sbjct: 1 MIDRRFCLCAFCWSKINFISSATQNLENIDNIINEKPLELLRQDLRLIPIRSVVVYCDIS 60
Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
CVLVRLLKYHDRTDLAIMMAQWMFRV +++
Sbjct: 61 CVLVRLLKYHDRTDLAIMMAQWMFRVGKEL 90
>gi|294675754|ref|YP_003576369.1| competence protein F [Rhodobacter capsulatus SB 1003]
gi|294474574|gb|ADE83962.1| competence protein F [Rhodobacter capsulatus SB 1003]
Length = 245
Score = 116 bits (291), Expect = 9e-25, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 4/120 (3%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN----NK 59
+ +++ + H ++P C + LC CW ++ F+ T +
Sbjct: 1 MPDALRAALRVALHTVFPPRCICCGAAVGSDDGLCPACWREMSFLAGTVCDCCGTPLPGE 60
Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
D + + P + R+ LY LV LK+ DR DL +A + R ++ I
Sbjct: 61 DAGPVLCDDCLTRPRPWGRGRAAFLYDGTGRKLVLQLKHADRLDLVPPLAAMLARAVQPI 120
>gi|217979097|ref|YP_002363244.1| phosphoribosyltransferase [Methylocella silvestris BL2]
gi|217504473|gb|ACK51882.1| phosphoribosyltransferase [Methylocella silvestris BL2]
Length = 268
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 6/118 (5%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
++ ++P C + LC CWSK+ FI +D
Sbjct: 29 LRLAGRAAADLVFPPSCLSCRQATAAHGSLCAACWSKVRFIERPFCERLGVPFAVDLGDE 88
Query: 66 ---PLKSMQKDLPLTQIRSVTLY-CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ + R+V + L+ LKY DR +LA + WM R I
Sbjct: 89 GLLSPDAVANPPVYERARAVAQFEDGPVRHLIHRLKYGDRMELAKPLGAWMARAGADI 146
>gi|115522182|ref|YP_779093.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisA53]
gi|115516129|gb|ABJ04113.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisA53]
Length = 273
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSM 70
P++C + LC CWS++ FI D P ++++
Sbjct: 37 ALDLALPTLCAACREPVAGD-GLCASCWSQLSFIEPPFCERLGIPFVYDPGPGILSMQAI 95
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ R+ Y +++ LV LK+HDR DLA +M +WM
Sbjct: 96 ADPPAYQRARAAVRYDEVARTLVHALKFHDRVDLAPVMGRWM 137
>gi|170749082|ref|YP_001755342.1| competence protein F [Methylobacterium radiotolerans JCM 2831]
gi|170655604|gb|ACB24659.1| competence protein F [Methylobacterium radiotolerans JCM 2831]
Length = 253
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 5/124 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+ A+ ++ + + +YP C C CWS + I
Sbjct: 4 LQAVATALRGLPRGVVSLVYPPTCAGCGSATADPGAFCPSCWSSLRLIEEPVCQRYGTPF 63
Query: 61 NIDKD-----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+D +++ + + R+V LY ++ +V LKY DR DLA +MA+ M
Sbjct: 64 ALDLGVGPLVSPRAIAEPPVFGRARAVALYDAVARRIVHRLKYEDRLDLAGVMARMMAAS 123
Query: 116 LEKI 119
+
Sbjct: 124 GRTL 127
>gi|118588528|ref|ZP_01545937.1| phosphoribosyltransferase [Stappia aggregata IAM 12614]
gi|118439234|gb|EAV45866.1| phosphoribosyltransferase [Stappia aggregata IAM 12614]
Length = 253
Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLK 68
+ P C ++ + LC CWS++ F+ D +
Sbjct: 12 RFALDFVLPQRCFSCDARVSEQTGLCAQCWSQVPFLEKPWCERLGIPFAYDVGEGAWSPQ 71
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ ++R+V Y + +V LK+ R DLA MA+WM R ++
Sbjct: 72 AITAPPVFNRLRAVAFYDGPARQMVHALKFSGRRDLARPMARWMVRSGSEL 122
>gi|163792772|ref|ZP_02186749.1| Phosphoribosyltransferase [alpha proteobacterium BAL199]
gi|159182477|gb|EDP66986.1| Phosphoribosyltransferase [alpha proteobacterium BAL199]
Length = 248
Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 4/123 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+ + ++ + + + P C ++ LC CWS++ FI + N
Sbjct: 4 LDSATSVLRGVTTAVLDALLPPRCAACGEPVDRPRTLCLACWSRLSFIARPLCAICGNPF 63
Query: 61 NIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
+ P + RS Y + S LV K+ DR L ++A WM
Sbjct: 64 ETAPPGEPVCGGCLANPPPWRRARSALAYDESSRPLVLGFKHGDRLHLTSLLAAWMRLAG 123
Query: 117 EKI 119
++
Sbjct: 124 AEL 126
>gi|144900147|emb|CAM77011.1| competence protein F [Magnetospirillum gryphiswaldense MSR-1]
Length = 244
Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 5/112 (4%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----PL 67
+L + P +C I+ LC CWS + F+ A + + D
Sbjct: 9 RKLLDAVLPPLCLCCGAIVAEPGALCAQCWSGLRFVAAPHCPVCGQPFDTDPGGADMVCG 68
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + + P + R+V Y D S L+ K+ DR + A +W+ R ++
Sbjct: 69 RCLAEPPPWDRARAVFCYDDASKPLILRFKHADRLEGAPAFGRWLARAGAEL 120
>gi|89067454|ref|ZP_01154967.1| Competence protein F [Oceanicola granulosus HTCC2516]
gi|89047023|gb|EAR53077.1| Competence protein F [Oceanicola granulosus HTCC2516]
Length = 237
Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ L IYP+ C + + LC CW++ F+ L + +
Sbjct: 1 MQSLLRAIYPAQCLLCEELTVEEQGLCPACWARTPFLFGLVCDLCGTALPGVDEGVPVHC 60
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ P + R+ Y + + LV LK DRT+LA A+W+ R +
Sbjct: 61 DDCLRTARPWDRGRAALRYDEAARELVLRLKRADRTELARPAARWLGRAAAPL 113
>gi|146337714|ref|YP_001202762.1| putative competence protein F (COMF) [Bradyrhizobium sp. ORS278]
gi|146190520|emb|CAL74519.1| putative competence protein F (COMF) [Bradyrhizobium sp. ORS278]
Length = 267
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
Query: 1 MPAIIQTVKSIIIEL----FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK 56
+ + +S L P++C ++ +C CW K+ FI
Sbjct: 13 LRVMASAARSACGHLAKLTLDIALPTLCIACREPVDGE-GVCAACWGKLSFIERPYCPKL 71
Query: 57 NNKDNIDKDP----LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
D P ++++ + R+ Y D++ LV LKY DRTDLA +M +WM
Sbjct: 72 GIPFVYDPGPELLSMEAIAAPPAYARARAAVRYDDVASTLVHALKYQDRTDLAPIMGRWM 131
Query: 113 FRVLEKI 119
R ++
Sbjct: 132 TRAGHEL 138
>gi|182678125|ref|YP_001832271.1| phosphoribosyltransferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634008|gb|ACB94782.1| phosphoribosyltransferase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 264
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL-----KS 69
I+P +C + I LC CW K+ FI ++D ++
Sbjct: 32 AADFIFPPLCLCCRKAIASTGALCPECWDKVRFIERPFCERLGTPFSMDLGQDGLLSPEA 91
Query: 70 MQKDLPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + R+V + LV LKY DR ++A + WM R +
Sbjct: 92 VANPPVYGRARAVAQFDEGPVRHLVHRLKYGDRLEVARPLGLWMARAGADL 142
>gi|307942657|ref|ZP_07658005.1| phosphoribosyltransferase [Roseibium sp. TrichSKD4]
gi|307774296|gb|EFO33509.1| phosphoribosyltransferase [Roseibium sp. TrichSKD4]
Length = 209
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSM 70
L + P C I LC CW KI FI + + P +++
Sbjct: 25 LLDSLLPPRCATCPEEIARGLGLCSSCWQKIRFIEVPVCHRFGTPFSHEIGPNALSPRAI 84
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ R+ LY + +V LK+ R +L+ +M +WM R ++
Sbjct: 85 ASPPLFERARAACLYDGPARDMVHALKFSRRRELSEVMGRWMVRAGREL 133
>gi|154247019|ref|YP_001417977.1| phosphoribosyltransferase [Xanthobacter autotrophicus Py2]
gi|154161104|gb|ABS68320.1| phosphoribosyltransferase [Xanthobacter autotrophicus Py2]
Length = 255
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 4/117 (3%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65
+++ L P C I + LCG CW K+ FI+ D
Sbjct: 14 ALRAFGSGLLGLALPPTCIACGGITGMAGGLCGPCWGKLAFISRPFCERTGAPFTHDPGG 73
Query: 66 ---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++ + R+ + D++ LV LKY DR D+A +A+ M + +
Sbjct: 74 ARISAQALDDPPAFDRARAAVTFNDVARDLVHKLKYADRLDVAAPLARLMAQAGADV 130
>gi|296444589|ref|ZP_06886553.1| phosphoribosyltransferase [Methylosinus trichosporium OB3b]
gi|296257857|gb|EFH04920.1| phosphoribosyltransferase [Methylosinus trichosporium OB3b]
Length = 262
Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 5/120 (4%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
+ ++ L +YP +C + + LC CW + FI + D
Sbjct: 18 ARLLRGFGARLLDLVYPPVCLVCREAVATHGALCPACWGGMGFIERPYCERLGLPFDRDL 77
Query: 65 D----PLKSMQKDLPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
L + + R+V Y D + L LKY+DR +LA + +WM R ++
Sbjct: 78 GAGAISLAASADPPAFARARAVARYDSDKARSLAHRLKYYDRLELAEPLGRWMARAGAEL 137
>gi|119385312|ref|YP_916368.1| competence protein F [Paracoccus denitrificans PD1222]
gi|119375079|gb|ABL70672.1| competence protein F [Paracoccus denitrificans PD1222]
Length = 245
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 38/120 (31%), Gaps = 12/120 (10%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------ 65
+ +YP C + LC CW + FIT T D
Sbjct: 1 MKGALRLVYPPQCLCCGAPVVEESGLCPACWREAEFITGTCCARCGAPLPDDGYGDGGDE 60
Query: 66 ------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P Q R+ +Y L +LK+ DR DLA + W+ R +
Sbjct: 61 AAGLLVCDDCIAMPRPWQQARAALVYRGAGRRLALMLKHGDRLDLAPALGGWVARAALPL 120
>gi|310817136|ref|YP_003965100.1| Competence protein F [Ketogulonicigenium vulgare Y25]
gi|308755871|gb|ADO43800.1| Competence protein F [Ketogulonicigenium vulgare Y25]
Length = 244
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK--NNKDNIDKD 65
V ++ + H IYP C + + LCG CW+ FI L D
Sbjct: 7 VGRLMDRIAHVIYPPGCMGCAAPVVGENALCGPCWAAAGFIAGASCTLCAVPLPGAGDAV 66
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW-MFRVLEKI 119
+ P + R++ +Y ++ L+ LK+ DRTDLA ++ W M R + +
Sbjct: 67 CDACLYHAPPWDRGRALMVYEGLARQLILQLKHADRTDLAPALSSWLMRRAGDWL 121
>gi|209965933|ref|YP_002298848.1| competence protein F [Rhodospirillum centenum SW]
gi|209959399|gb|ACJ00036.1| competence protein F [Rhodospirillum centenum SW]
Length = 263
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 4/119 (3%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
++ ++ + + P C + LC CWS++ FI +
Sbjct: 17 VRVLRDWRGRALNLLLPPRCLACGTDVEAPGTLCPACWSRVTFIGPPLCACCGRPFDYAA 76
Query: 65 D----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + RS +Y + S LV K+ DRTD+A W+ R ++
Sbjct: 77 PDRSLCGACIAAPPRFDRCRSALVYDEGSRGLVLAFKHADRTDVAEGFGAWLARAGAEL 135
>gi|46203599|ref|ZP_00209035.1| COG1040: Predicted amidophosphoribosyltransferases
[Magnetospirillum magnetotacticum MS-1]
Length = 132
Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 5/106 (4%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
+ Q ++S+ IYP C LC CWS I +
Sbjct: 21 GLAQGLRSVASVAIGLIYPPTCVSCGAATGEPHALCAQCWSGFRLIERPYCKRLGTPFAL 80
Query: 63 DKD-----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
D ++ + + R+V +Y + LV LKY+DR D
Sbjct: 81 DLGIGPLLSPAAIAEPPVFGRARAVAVYDGTARDLVHRLKYNDRLD 126
>gi|90422044|ref|YP_530414.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB18]
gi|90104058|gb|ABD86095.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB18]
Length = 269
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
Q + P++C ++ +C CWS++ FI D
Sbjct: 24 QALGHGARLALDIALPTLCVACREPVSGH-GVCAACWSQLSFIAPPYCERLGIPFVYDPG 82
Query: 66 P----LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P ++++ + R+ Y +++ LV LK+HDR DLA M +WM + +
Sbjct: 83 PGILSMQAIADPPAYARARAAVRYDEVARTLVHALKFHDRVDLAPTMGRWMAQAGAPL 140
>gi|114762234|ref|ZP_01441702.1| Competence protein F [Pelagibaca bermudensis HTCC2601]
gi|114545258|gb|EAU48261.1| Competence protein F [Roseovarius sp. HTCC2601]
Length = 241
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK----DNID 63
++ + L +YP C I ++ F LC CW F++ +
Sbjct: 1 MRGTMQTLLRMLYPPRCLICGGLVESDFGLCAACWRDTPFLSGLACATCGVPLPGVSDRA 60
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
+ + P + + Y D LV +LK+ DR D+
Sbjct: 61 EHCDACLAAPPPWREGTAALAYRDNGRTLVLMLKHGDRHDI 101
>gi|328542087|ref|YP_004302196.1| phosphoribosyl transferase domain protein [polymorphum gilvum
SL003B-26A1]
gi|326411836|gb|ADZ68899.1| Phosphoribosyl transferase domain protein [Polymorphum gilvum
SL003B-26A1]
Length = 257
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 4/123 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+ + + P C R I LC CW+ + ++ A
Sbjct: 7 LNGFTRLAAQACGAALDLLLPPRCLACERTIAEPGGLCAVCWADMPWLEAPRCARLGTPF 66
Query: 61 NIDKDPLK----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
+ D ++ + + R+ LY + LV LK+ R + A M +WM
Sbjct: 67 SHDLGAGALSPRAIAEPPLFDRARAAALYKGPARDLVLTLKFGGRRETAGAMGRWMAFAG 126
Query: 117 EKI 119
++
Sbjct: 127 HEL 129
>gi|46201247|ref|ZP_00208026.1| COG1040: Predicted amidophosphoribosyltransferases
[Magnetospirillum magnetotacticum MS-1]
Length = 344
Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 4/112 (3%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65
I + + P +C + LC CWS + F+ D
Sbjct: 105 VRIARLVIDALLPPLCLSCQAEVAEPGSLCPACWSGMVFLGEPSCACCGLPFEFDPGDGV 164
Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
+ + + R+V Y D S LV K+ DR + A+WM R
Sbjct: 165 ICGECARVKPRYARARAVFRYDDSSKALVLRFKHGDRLEGVGAFARWMARAG 216
>gi|83953111|ref|ZP_00961833.1| Competence protein F [Sulfitobacter sp. NAS-14.1]
gi|83842079|gb|EAP81247.1| Competence protein F [Sulfitobacter sp. NAS-14.1]
Length = 219
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 33 LRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCD 87
LCG CW FI L + D + P R+ LY D
Sbjct: 3 AHGGLCGPCWRDTGFIEGVVCETCGIPLLGDLSETDVRCDACLAAPPPWDHGRAALLYRD 62
Query: 88 MSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
LV LK+ DR D+A WM RV+
Sbjct: 63 TGRRLVLALKHGDRQDIAKPAGHWMARVIAP 93
>gi|91974589|ref|YP_567248.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB5]
gi|91681045|gb|ABE37347.1| phosphoribosyltransferase [Rhodopseudomonas palustris BisB5]
Length = 272
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 5/109 (4%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSM 70
P++C + LC CWS++ FI D P ++++
Sbjct: 36 ALDVALPTLCVACREPVAGD-GLCAPCWSQLSFIAPPYCEKLGIPFVYDPGPGLLSMQAI 94
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ R+ Y +++ LV LK+HDR DLA M +WM + +
Sbjct: 95 ADPPAYARARAAVRYDEVAKTLVHALKFHDRVDLAPTMGRWMAHAGQPL 143
>gi|288956999|ref|YP_003447340.1| hypothetical protein AZL_001580 [Azospirillum sp. B510]
gi|288909307|dbj|BAI70796.1| hypothetical protein AZL_001580 [Azospirillum sp. B510]
Length = 255
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPL 76
P C ++ + LC CW + FI + + P
Sbjct: 31 PPRCLGCGEAVDRQGGLCAACWVTLTFIAPPLCARCGLPFEYEAQEGALCGACLAAPPPF 90
Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ R+V Y D S LV K+ DR A W+ R +++
Sbjct: 91 ARARAVLAYDDGSRPLVLGFKHGDRIHAAGSYGLWLARAGKEL 133
>gi|170742923|ref|YP_001771578.1| phosphoribosyltransferase [Methylobacterium sp. 4-46]
gi|168197197|gb|ACA19144.1| phosphoribosyltransferase [Methylobacterium sp. 4-46]
Length = 279
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----PLKS 69
L +YP C L LC CW + FI +D +
Sbjct: 30 LLGLVYPPTCIACGAATGLPHALCPACWRGVRFIERPYCERLGTPFAVDLGVLGLLSPAA 89
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
M + R+ Y + LV LKY DR DL
Sbjct: 90 MADPPVFGRARAALRYDATAKRLVHRLKYEDRLDL 124
>gi|154252188|ref|YP_001413012.1| phosphoribosyltransferase [Parvibaculum lavamentivorans DS-1]
gi|154156138|gb|ABS63355.1| phosphoribosyltransferase [Parvibaculum lavamentivorans DS-1]
Length = 258
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 4/119 (3%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
+ K+ + + P +C ++ LCG CW+ + FI + +
Sbjct: 11 AEAAKAGFSRVADIVLPPLCLGCGCGLDSHAALCGTCWAGVDFIDRPYCEVTGVPFPYEA 70
Query: 65 D----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ + R+V Y + S L+ KY DR + A A W+ R +
Sbjct: 71 GLGAVSAAAIANPPSYARARAVMRYNEGSTRLIHRFKYSDRMEAAPAFALWLVRAGAAL 129
>gi|298292753|ref|YP_003694692.1| phosphoribosyltransferase [Starkeya novella DSM 506]
gi|296929264|gb|ADH90073.1| phosphoribosyltransferase [Starkeya novella DSM 506]
Length = 273
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ + + P IC ++ CLC CW + FI D DP
Sbjct: 24 AARGLGRRVIDFALPPICMTRRAAVDQPGCLCATCWRGMEFIERPYCDRLGTPLPYDADP 83
Query: 67 LK-------SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
L ++ + R+V + +++ LV LKY DR D+A MA+ M R I
Sbjct: 84 LDGPAVSSAALADPPAYARARAVAAFGEVARDLVHALKYADRLDVAPPMARMMARAGADI 143
>gi|86747153|ref|YP_483649.1| phosphoribosyltransferase [Rhodopseudomonas palustris HaA2]
gi|86570181|gb|ABD04738.1| Phosphoribosyltransferase [Rhodopseudomonas palustris HaA2]
Length = 254
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP----LKSM 70
P++C + LC CWS++ FI D P ++++
Sbjct: 18 ALDVALPTLCVACREPVAGE-GLCPQCWSQLSFIAPPYCEKLGIPFVYDPGPGILSMQAI 76
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ R+ Y +++ LV LK+HDR DLA M +WM +
Sbjct: 77 ADPPAYARARAAVRYDEVAKTLVHALKFHDRIDLAPTMGRWMAHAGAPL 125
>gi|296116147|ref|ZP_06834765.1| competence protein F [Gluconacetobacter hansenii ATCC 23769]
gi|295977253|gb|EFG84013.1| competence protein F [Gluconacetobacter hansenii ATCC 23769]
Length = 282
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 6/118 (5%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD------N 61
+ + ++ + P C + +C C++ ++ I+A
Sbjct: 31 LHKVAGQVLDLLLPPHCLSCGEEVEQAGHVCAACFTHLNLISAPACRKCGTPFTSEAAAG 90
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
D + P R+ +Y D S LV LKY DRT+ A +A++M +
Sbjct: 91 DDLTCQNCLDAPPPWDSGRAALVYDDWSRRLVLGLKYGDRTENAAFLARYMHLSARDL 148
>gi|83592076|ref|YP_425828.1| phosphoribosyltransferase [Rhodospirillum rubrum ATCC 11170]
gi|83574990|gb|ABC21541.1| Phosphoribosyltransferase [Rhodospirillum rubrum ATCC 11170]
Length = 246
Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 6/117 (5%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65
+ + LF + P C + LC C+S + IT + +
Sbjct: 6 REMGRGLFDLLLPPRCLGCGTQVADPDALCPACFSGLAHITEPFCACCGLPFELGGEGEG 65
Query: 66 ---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ ++ R+V Y D S L+ K+ DR D A+WM R +
Sbjct: 66 ERLCGACLGTPPLFSRARAVWRYDDASARLILGFKHADRLDSVPGFARWMARAGRAL 122
>gi|294012632|ref|YP_003546092.1| putative amidophosphoribosyltransferase [Sphingobium japonicum
UT26S]
gi|292675962|dbj|BAI97480.1| putative amidophosphoribosyltransferase [Sphingobium japonicum
UT26S]
Length = 251
Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 4/111 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID---- 63
+K+ + L P CP I++ C CWS + F+ D
Sbjct: 13 LKAALRPLADYALPPRCPGCGEIVDADHAFCLACWSGMRFLGEPCCARCGLPFEYDRGDG 72
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ + P R+V Y D++ + LKY R L+ ++A+ M R
Sbjct: 73 AECGACLADPPPYDSARAVLAYGDVARAVALRLKYGRRIGLSRLIAKQMAR 123
>gi|307294581|ref|ZP_07574423.1| phosphoribosyltransferase [Sphingobium chlorophenolicum L-1]
gi|306879055|gb|EFN10273.1| phosphoribosyltransferase [Sphingobium chlorophenolicum L-1]
Length = 246
Score = 96.1 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 4/118 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
M A+ +K+ + L P CP I++ C CWS + F+ A
Sbjct: 1 MMALSPLLKTALRPLVDYALPPRCPGCGEIVDADDAFCLRCWSGMRFLGAPCCARCGAPF 60
Query: 61 NID----KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ D + + P ++V Y D++ + LKY R LA ++A+ M R
Sbjct: 61 DYDRGAGAECGACLADPPPFDSAQAVLAYGDVARAVALRLKYGRRIGLARLIAKQMAR 118
>gi|94496926|ref|ZP_01303500.1| amidophosphoribosyltransferase [Sphingomonas sp. SKA58]
gi|94423602|gb|EAT08629.1| amidophosphoribosyltransferase [Sphingomonas sp. SKA58]
Length = 256
Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 42/122 (34%), Gaps = 4/122 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
M A+ +KS + P CP I+ C CW + F+
Sbjct: 1 MMALAPLLKSALRPALDYALPPRCPGCGGIVGEDHAFCLDCWGGMEFLGDPCCARCGISF 60
Query: 61 ----NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
D + + R+V Y D++ + LKY RT LA ++A+ M R
Sbjct: 61 PHDMGQDAECGACLADPPAWDSARAVLAYGDVARTVALRLKYGRRTGLARLIARQMLRHA 120
Query: 117 EK 118
Sbjct: 121 GP 122
>gi|254472326|ref|ZP_05085726.1| phosphoribosyltransferase [Pseudovibrio sp. JE062]
gi|211958609|gb|EEA93809.1| phosphoribosyltransferase [Pseudovibrio sp. JE062]
Length = 281
Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP- 66
+K + + ++P CP+ S ++ LC CW K+ I+A + + P
Sbjct: 35 LKRSLSFVLDALFPHCCPVCSELVQGEGGLCLSCWQKLDLISAPYCERLGVPLHYELGPN 94
Query: 67 ---LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ + R+ LY + LV+ K++ L+ +A M ++
Sbjct: 95 AWSAAALVNPPDYERARAAALYNGPAQELVKRFKFYGEIRLSKFLAGCMLNPGAEL 150
>gi|218659666|ref|ZP_03515596.1| competence protein F (phosphoribosyltransferase protein) [Rhizobium
etli IE4771]
Length = 182
Score = 91.9 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+++ P ++RS + LV LKY DRTDLA MMA WM R +
Sbjct: 3 SAEAIANPPPFDRVRSAATHDHAVRDLVHGLKYRDRTDLAPMMAGWMLRASDG 55
>gi|258542216|ref|YP_003187649.1| competence protein F [Acetobacter pasteurianus IFO 3283-01]
gi|256633294|dbj|BAH99269.1| competence protein F [Acetobacter pasteurianus IFO 3283-01]
gi|256636353|dbj|BAI02322.1| competence protein F [Acetobacter pasteurianus IFO 3283-03]
gi|256639406|dbj|BAI05368.1| competence protein F [Acetobacter pasteurianus IFO 3283-07]
gi|256642462|dbj|BAI08417.1| competence protein F [Acetobacter pasteurianus IFO 3283-22]
gi|256645517|dbj|BAI11465.1| competence protein F [Acetobacter pasteurianus IFO 3283-26]
gi|256648570|dbj|BAI14511.1| competence protein F [Acetobacter pasteurianus IFO 3283-32]
gi|256651623|dbj|BAI17557.1| competence protein F [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654614|dbj|BAI20541.1| competence protein F [Acetobacter pasteurianus IFO 3283-12]
Length = 255
Score = 91.9 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 6/117 (5%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD------NI 62
+ + L +YP C + + C C+ ++ I+
Sbjct: 6 RKLGTALMDILYPPSCVLCGADVAQHGLTCAACFGRLQPISRPFCDACATPQPSQESLGR 65
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Q Q R+ +Y + L+ LKY DRT+ A +AQ M ++ + I
Sbjct: 66 TGLCAACEQHHPAWQQARAAFVYTTAARDLILQLKYADRTENARFLAQRMAQIGQDI 122
>gi|260752407|ref|YP_003225300.1| phosphoribosyltransferase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258551770|gb|ACV74716.1| phosphoribosyltransferase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 281
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK- 59
+ ++ S + + P CP +I C CW +HF+ I
Sbjct: 7 IKKCLEAAYSGLKTVIDYALPPRCPNCGAVILADHSFCVECWQSLHFLVEPACIQCGFPL 66
Query: 60 ---DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ + +Q ++ + Y ++S L+ KY +T LA MA+ M R
Sbjct: 67 PRDQQYEPLCGRCLQHPPSFDRMNAAVAYDEISRQLILRCKYGKQTMLARDMAKLMLR 124
>gi|56552061|ref|YP_162900.1| amidophosphoribosyltransferase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|56543635|gb|AAV89789.1| amidophosphoribosyltransferase [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 281
Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK- 59
+ ++ S + + P CP +I C CW +HF+ I
Sbjct: 7 IKKCLEAAYSGLKTVIDYALPPRCPNCGAVILADHSFCVECWQSLHFLVEPACIQCGFPL 66
Query: 60 ---DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ + +Q ++ + Y ++S L+ KY +T LA MA+ M R
Sbjct: 67 PRDQQYEPLCGRCLQHPPSFDRMNAAVAYDEISRQLILRCKYGKQTMLARDMAKLMMR 124
>gi|329113385|ref|ZP_08242166.1| Competence protein F [Acetobacter pomorum DM001]
gi|326697210|gb|EGE48870.1| Competence protein F [Acetobacter pomorum DM001]
Length = 255
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 6/117 (5%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD------NI 62
+ + L +YP C + + + C C+ ++ I+
Sbjct: 6 RKLGAVLLDILYPPSCILCGADVAQQGAACVSCFDRLQSISRPFCDACAAPQPSQESLGH 65
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Q R+ +Y + L+ LKY DRT+ A +AQ M ++ + I
Sbjct: 66 TGLCAACEQHHPAWQHARAAFVYTAAARDLILQLKYADRTENARFLAQRMMQIGQDI 122
>gi|241762015|ref|ZP_04760099.1| amidophosphoribosyltransferase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241373481|gb|EER63068.1| amidophosphoribosyltransferase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 281
Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK- 59
+ ++ S + + P CP +I C CW +HF+ I
Sbjct: 7 IKKCLEAAYSGLKTVIDYALPPRCPNCGAVILADHSFCVECWQSLHFLVEPACIQCGFPL 66
Query: 60 ---DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ + +Q ++ + Y ++S L+ KY +T LA MA+ M R
Sbjct: 67 PRDQQYEPLCGRCLQHPPSFDRMNAAVAYDEISKQLILRCKYGKQTMLARDMAKLMMR 124
>gi|300024693|ref|YP_003757304.1| phosphoribosyltransferase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526514|gb|ADJ24983.1| phosphoribosyltransferase [Hyphomicrobium denitrificans ATCC 51888]
Length = 272
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 38/120 (31%), Gaps = 4/120 (3%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+ + + P +C I LC CW +++F+ D
Sbjct: 27 LFRAFGRAGRSALDVLLPPLCLACRTHITAHDALCPACWRRVNFVRPPLCDRLGLPLPYD 86
Query: 64 KD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ ++R+V + + L+ K+HD + +W+ ++
Sbjct: 87 TGGRMVSAAAVADPPDFDRVRAVASFDGVMRELIHAFKFHDTHHARHLFGRWLTEAGREL 146
>gi|197104234|ref|YP_002129611.1| predicted amidophosphoribosyltransferase [Phenylobacterium zucineum
HLK1]
gi|196477654|gb|ACG77182.1| predicted amidophosphoribosyltransferase [Phenylobacterium zucineum
HLK1]
Length = 259
Score = 89.2 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 3/114 (2%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
V+++ ++P L L WS+IHF+ + D
Sbjct: 18 VQALWRGALDLVFPPQALD-GGPRPLAGGLSHGAWSRIHFLDGPVCDGCGVPFDYDPGAR 76
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + R+ LY + S + LK+ DRTDLA + A+W+ R ++
Sbjct: 77 CPACQARPRAFDRARAACLYDETSREPILKLKHADRTDLAPLFARWLSRAAREL 130
>gi|330994801|ref|ZP_08318723.1| Protein gntX [Gluconacetobacter sp. SXCC-1]
gi|329758062|gb|EGG74584.1| Protein gntX [Gluconacetobacter sp. SXCC-1]
Length = 236
Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 6/108 (5%)
Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK------DNIDKDPLKSMQ 71
++P C + LC C +IH ITA D + +
Sbjct: 1 MLFPPRCAGCGDDVAQTAHLCATCVGRIHLITAPFCHCCVMPFTSRAAGGPDLTCVACRE 60
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + R+ +Y D L+ LKY DRT+ A ++A++M +
Sbjct: 61 NPPPWREARAAMVYDDTPRTLILPLKYADRTENAALLARYMAGAALGL 108
>gi|163759885|ref|ZP_02166969.1| phosphoribosyltransferase [Hoeflea phototrophica DFL-43]
gi|162282843|gb|EDQ33130.1| phosphoribosyltransferase [Hoeflea phototrophica DFL-43]
Length = 187
Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+++ P + R+ LY ++ L + LKY DR DLA MMA+WM R +I
Sbjct: 3 SPEAIANPPPYAKARAAVLYDGVARKLAQGLKYSDRADLAKMMAKWMVRAGREI 56
>gi|254512068|ref|ZP_05124135.1| competence protein F [Rhodobacteraceae bacterium KLH11]
gi|221535779|gb|EEE38767.1| competence protein F [Rhodobacteraceae bacterium KLH11]
Length = 192
Score = 85.7 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 54 ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ D + ++ P R+ LY + LV LK+ DR +LA A+WM
Sbjct: 2 PVPGAPDGYRIECDDCLKAPRPWQDGRAALLYQGRAKALVLALKHGDRAELARPAARWMV 61
Query: 114 RVLEKI 119
+ +
Sbjct: 62 QAGRDL 67
>gi|190571652|ref|YP_001976010.1| competence protein f [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019054|ref|ZP_03334861.1| competence protein f [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357924|emb|CAQ55385.1| competence protein f [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995163|gb|EEB55804.1| competence protein f [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 234
Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN--NKDNIDKDPLK 68
++ + I+P++C RII+ + LC C KI+F+T + DNID K
Sbjct: 5 LLKKATDLIFPNVCVSCERIIDKSYDLCSECNKKINFLTKHYCNVCGVVIPDNIDT-CGK 63
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P +RSV Y + S ++ K+ D + + A+WM++ + I
Sbjct: 64 CISNPSPFKVLRSVFAYDEHSKNMIINFKFFDNLNYVKVYAKWMYKANKDI 114
>gi|162147687|ref|YP_001602148.1| phosphoribosyltransferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786264|emb|CAP55846.1| putative phosphoribosyltransferase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 276
Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK-----------DNIDKDPLKSMQK 72
CP+ + + LC C+ + FI+ + +
Sbjct: 34 CPLCHQPVERAGLLCPDCFRHMRFISEPCCDACGEPFAGAGFAGSVLGGAGRICASCADR 93
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P R+ +Y + S L+ LKY DRT+LA ++ + M R+ + +
Sbjct: 94 RPPWRAGRAALVYDEWSRALILRLKYADRTELAPLLGRHMARIGQGM 140
>gi|87200124|ref|YP_497381.1| phosphoribosyltransferase [Novosphingobium aromaticivorans DSM
12444]
gi|87135805|gb|ABD26547.1| phosphoribosyltransferase [Novosphingobium aromaticivorans DSM
12444]
Length = 269
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH------ILKNNKDNID 63
S + + ++P CP+ + LC CW K+ + + ++ + +
Sbjct: 9 SALDPVLDFVFPPRCPLCGAPVAAHGGLCMACWDKLETPSGVACRSCQRPMGGSDDAHAE 68
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
M + I + TLY D S LV K+ R LA MMA+
Sbjct: 69 LVCAPCMADPPRHSGIAAATLYNDASRALVLAFKHGRRIGLAPMMAR 115
>gi|218513089|ref|ZP_03509929.1| competence protein F (phosphoribosyltransferase protein)
[Rhizobium etli 8C-3]
Length = 96
Score = 84.2 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
Q ++ L +YP C + LC CW+ I FI + + D
Sbjct: 14 RTQLLRPFSA-LADFLYPPACSVCGVSTGGHRGLCAKCWAGIRFIERPYCEVLGIPFSHD 72
Query: 64 KDPL----KSMQKDLPLTQIRSVT 83
+++ P ++RS
Sbjct: 73 LGAGIVSAEAIANPPPFDRLRSAA 96
>gi|209542312|ref|YP_002274541.1| putative phosphoribosyltransferase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209529989|gb|ACI49926.1| putative phosphoribosyltransferase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 260
Score = 84.2 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK-----------DNIDKDPLKSMQK 72
CP+ + + LC C+ + FI+ + +
Sbjct: 18 CPLCHQPVERAGLLCPDCFRHMRFISEPCCDACGEPFAGAGFAGSVLGGAGRICASCADR 77
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P R+ +Y + S L+ LKY DRT+LA ++ + M R+ + +
Sbjct: 78 RPPWRAGRAALVYDEWSRALILRLKYADRTELAPLLGRHMARIGQGM 124
>gi|85374003|ref|YP_458065.1| amidophosphoribosyltransferase [Erythrobacter litoralis HTCC2594]
gi|84787086|gb|ABC63268.1| amidophosphoribosyltransferase [Erythrobacter litoralis HTCC2594]
Length = 263
Score = 83.8 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ +YP CP I + LC CW + + ++N+
Sbjct: 11 LAPAVDLVYPPRCPCCGDGIERQEGLCLDCWQGLVLLGEPSCATCRRPIRNSGAEEGAVC 70
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ + I + TLY D S LV K+ R LA MMA+ + R
Sbjct: 71 AACLADPPRHSGIYAATLYNDTSRRLVLAFKHGRRIALARMMAKLIQR 118
>gi|114570814|ref|YP_757494.1| phosphoribosyltransferase [Maricaulis maris MCS10]
gi|114341276|gb|ABI66556.1| phosphoribosyltransferase [Maricaulis maris MCS10]
Length = 255
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 34/114 (29%), Gaps = 8/114 (7%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT-------EHILKNNKDNIDKD 65
L +P +CP+ ++ L WS++ F+ A
Sbjct: 14 RRLADLAWPPVCPLAGDTVDRAGHLTPQAWSRLTFLDAPWCDTCGWPFPYPAGSGGASLA 73
Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ + R+ Y LV K+ R ++ +WM R +
Sbjct: 74 VCANCIANPPRFDRARAPLAYDARVSPLVVGFKHGSRREMIGQFGRWMVRAGKD 127
>gi|149184493|ref|ZP_01862811.1| amidophosphoribosyltransferase [Erythrobacter sp. SD-21]
gi|148831813|gb|EDL50246.1| amidophosphoribosyltransferase [Erythrobacter sp. SD-21]
Length = 262
Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 5/113 (4%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
+ V+ I +YP CP I + LC CWS +
Sbjct: 17 RAVREGIAPFVDLVYPPRCPACGEAIGEQGGLCAECWSGLAIPGDPSCAACQRPFGEVGP 76
Query: 66 -----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
++ I + TLY ++S LV LK+ R LA ++A+ M
Sbjct: 77 KEGSFCAPCLENAPIHDGIAAGTLYTEVSRKLVLALKHGRRIALAKLLARLMT 129
>gi|326403688|ref|YP_004283770.1| putative phosphoribosyltransferase [Acidiphilium multivorum AIU301]
gi|325050550|dbj|BAJ80888.1| putative phosphoribosyltransferase [Acidiphilium multivorum AIU301]
Length = 241
Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 1/100 (1%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQI 79
P C S + LC C+ + FIT
Sbjct: 15 PPQCLACSEEVPADGLLCVSCFVETSFITDPVCGQCGLPLAEPAPLCTSCDWAPPTFRSA 74
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
R+ Y + L+ KY DR +LAI +A+ + R +++
Sbjct: 75 RAALQYNAAAKRLILPFKYADRPELAIGLARLLLRPGKEL 114
>gi|114327260|ref|YP_744417.1| amidophosphoribosyltransferase family protein [Granulibacter
bethesdensis CGDNIH1]
gi|114315434|gb|ABI61494.1| amidophosphoribosyltransferase family protein [Granulibacter
bethesdensis CGDNIH1]
Length = 282
Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 12/131 (9%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINL------RFCLCGHCWSKIHFITATEHI 54
+ A+ ++S + L + + P CP+ ++ LC C++ ++FI
Sbjct: 15 LTAMPILIRSAGLHLLNWLIPPTCPVCHAETSMTGPDGLSGLLCASCFATLNFIVPPVCQ 74
Query: 55 LKNNKDNIDKD------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM 108
+ + K R+ LY D S ++ K+ DR A ++
Sbjct: 75 CCGRPMDAAEGIAPDGVCEVCRIKPPRFRHARAALLYDDGSRRIILPFKHADRMAHASLL 134
Query: 109 AQWMFRVLEKI 119
A+WM +
Sbjct: 135 ARWMADSGGDL 145
>gi|312115454|ref|YP_004013050.1| phosphoribosyltransferase [Rhodomicrobium vannielii ATCC 17100]
gi|311220583|gb|ADP71951.1| phosphoribosyltransferase [Rhodomicrobium vannielii ATCC 17100]
Length = 261
Score = 81.1 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 5/121 (4%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNN 58
+ + + I P++C + + LC CW + ITA L
Sbjct: 5 VARFAAESLRYSTDLILPAVCVSCATPVTRHNLLCAKCWGDLVPITAPYCDRLGIPLPGY 64
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
D+ ++ + R+ +Y + L+ K+ DR + + +
Sbjct: 65 DDSGPHLSAQAFTDPPVFDRARAACVYGGVIRKLIVRFKFEDRHEPLPLFLRLTREAGRD 124
Query: 119 I 119
+
Sbjct: 125 L 125
>gi|254475054|ref|ZP_05088440.1| competence protein F [Ruegeria sp. R11]
gi|214029297|gb|EEB70132.1| competence protein F [Ruegeria sp. R11]
Length = 189
Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ D + P Q R+ LY + L+ LK+ DRTD+ A W+ +
Sbjct: 1 MMGEDDGFAMACDDCLAHPRPWVQGRAALLYEGTARRLILGLKHGDRTDIVAPAADWLAK 60
Query: 115 VLEKI 119
+
Sbjct: 61 ATAVL 65
>gi|295688314|ref|YP_003592007.1| phosphoribosyltransferase [Caulobacter segnis ATCC 21756]
gi|295430217|gb|ADG09389.1| phosphoribosyltransferase [Caulobacter segnis ATCC 21756]
Length = 256
Score = 78.8 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 8/124 (6%)
Query: 2 PAIIQTVKSIIIEL----FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN 57
A + EL + P I L L +SK+ F+
Sbjct: 6 KAAPSRARPFFAELGRGVLDLLLPPASL--DGEIALTGGLSASAFSKVTFLDDPVCDGCG 63
Query: 58 NKDNIDKD--PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + K + R+ +Y + S L+ LK+ DRTDL+ + A+W+ R
Sbjct: 64 LAQAYEAETRCPACQAKPRAFQRARAACVYDEHSRELILKLKHADRTDLSGLFARWLSRA 123
Query: 116 LEKI 119
+
Sbjct: 124 SADL 127
>gi|225677126|ref|ZP_03788126.1| putative competence protein F [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590830|gb|EEH12057.1| putative competence protein F [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 241
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKS 69
++ + + I+PS+C II+ LC C KI+F+T + + + K
Sbjct: 5 LLKKATNLIFPSVCVSCECIIDENLNLCSECNKKINFLTKHYCNVCGVVISDNIYTCGKC 64
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ P +RSV Y S ++ K+ D + + A+W+ + +
Sbjct: 65 IINPPPFKVLRSVFAYDQHSRNMIINFKFFDNLNYVKIYAKWIHQANQD 113
>gi|58697413|ref|ZP_00372723.1| competence protein F, interruption-N [Wolbachia endosymbiont of
Drosophila simulans]
gi|225630605|ref|YP_002727396.1| putative competence protein F [Wolbachia sp. wRi]
gi|58536171|gb|EAL59759.1| competence protein F, interruption-N [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592586|gb|ACN95605.1| putative competence protein F [Wolbachia sp. wRi]
Length = 243
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKS 69
++ + + I+PS+C II+ LC C KI+F+T + + + K
Sbjct: 5 LLKKATNLIFPSVCVSCECIIDENLNLCSECNKKINFLTKHYCNVCGVVISDNIYTCGKC 64
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ P +RSV Y S ++ K+ D + + A+W+ + +
Sbjct: 65 IINPPPFKVLRSVFAYDQHSRNMIINFKFFDNLNYVKIYAKWIHQANQD 113
>gi|149912918|ref|ZP_01901452.1| competence protein F, putative [Roseobacter sp. AzwK-3b]
gi|149813324|gb|EDM73150.1| competence protein F, putative [Roseobacter sp. AzwK-3b]
Length = 190
Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ ++ + ++ P + R+ LY D LV LK+ DR D+ A+WM R
Sbjct: 1 MPGENNDTPEYCDDCLRYAKPWSMGRAAVLYRDNGRKLVLGLKHADRHDIVRPAARWMAR 60
Query: 115 VLEKI 119
+ +
Sbjct: 61 AAQPM 65
>gi|83950741|ref|ZP_00959474.1| competence protein F, putative [Roseovarius nubinhibens ISM]
gi|83838640|gb|EAP77936.1| competence protein F, putative [Roseovarius nubinhibens ISM]
Length = 195
Score = 78.0 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 24/69 (34%)
Query: 51 TEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + P + R+ LY M LV LK+ DR D+ +
Sbjct: 2 PGEQEPGGPGAEPAQCDACLVRVRPWARGRAAMLYESMGRRLVLGLKHGDRHDVLRPAGR 61
Query: 111 WMFRVLEKI 119
W+ R +I
Sbjct: 62 WLARAGREI 70
>gi|85708603|ref|ZP_01039669.1| amidophosphoribosyltransferase [Erythrobacter sp. NAP1]
gi|85690137|gb|EAQ30140.1| amidophosphoribosyltransferase [Erythrobacter sp. NAP1]
Length = 287
Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 5/112 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-----ILKNNKDNIDKDP 66
+ + +YP CP+ + + LC CW I + + + +
Sbjct: 24 LSPVVDLVYPPRCPLCGTALASQGGLCSECWGDIEVLGEPACSGCQRPMGSAAASASDHC 83
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ + I + +LY D S L+ K+ + +A ++A + +
Sbjct: 84 FACVSEPPLHDGIIAASLYNDASRKLILAFKHGGKIAIAPLLAGLIAARMAP 135
>gi|114797458|ref|YP_761845.1| ComF family protein [Hyphomonas neptunium ATCC 15444]
gi|114737632|gb|ABI75757.1| ComF family protein [Hyphomonas neptunium ATCC 15444]
Length = 252
Score = 77.7 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
M A K + ++P I L ++KI FIT
Sbjct: 1 MKAGRLAAKGLFRRTRDFLWPPRSLISGDRGEGAGPLRPDEFTKIRFITDPVCNRCGVPQ 60
Query: 61 NIDKDPLK----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
+ D P M + + R+ +Y D+S V LK R D ++ WM +
Sbjct: 61 DFDAGPDAECPACMARPPRWGRARAAFVYDDVSRRPVLDLKRAGRRDGLETLSGWMVQAG 120
Query: 117 EKI 119
+
Sbjct: 121 GAL 123
>gi|254418197|ref|ZP_05031921.1| Phosphoribosyl transferase domain protein [Brevundimonas sp. BAL3]
gi|196184374|gb|EDX79350.1| Phosphoribosyl transferase domain protein [Brevundimonas sp. BAL3]
Length = 264
Score = 76.1 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 7/120 (5%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
+ ++ + L + P + L WS+I F+ A D
Sbjct: 17 RQLRDMGRGLADLVLPPLAHDSREATAA-AGLTPDAWSRIKFLDAPVCDGCGAAFEFDGG 75
Query: 66 ------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + + R+ +Y D S L+ K+ D+ A + A+W+ R +
Sbjct: 76 AFAETRCAACIAQPYVFARARAACVYDDHSRSLILRYKHGDQQQFASLFARWIGRAATDL 135
>gi|16125083|ref|NP_419647.1| competence protein F [Caulobacter crescentus CB15]
gi|13422081|gb|AAK22815.1| competence protein F [Caulobacter crescentus CB15]
Length = 265
Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 6/116 (5%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK----DNID 63
++ + L + P ++ L ++K+ FI D
Sbjct: 23 LRGLGRGLLDLVLPPASLDGGPALS--GGLSPAAFAKVTFIDDPVCDGCGLAMAYVDAAA 80
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ K + R+ +Y + S LV +LK+ DR DLA + A+W+ R ++
Sbjct: 81 ERCPACQAKPKTFARARAACVYDEHSRDLVLMLKHADRVDLAGLFARWLSRAAGEL 136
>gi|148553483|ref|YP_001261065.1| phosphoribosyltransferase [Sphingomonas wittichii RW1]
gi|148498673|gb|ABQ66927.1| phosphoribosyltransferase [Sphingomonas wittichii RW1]
Length = 248
Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 4/118 (3%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
M ++ ++ I P CP I C CWS + F+ +
Sbjct: 1 MRLLVGGLRGIAGAGLRFALPPRCPGCGVITPDMHQFCLDCWSALDFLGDPQCARCGAPF 60
Query: 61 NIDKDPLK----SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+D P +R+ Y ++ L LKY R +A +A + R
Sbjct: 61 EVDPGPGALCGGCHADPPAFDSMRAAVAYGPIARALALKLKYGRRPGIAHTVAAQLRR 118
>gi|326389598|ref|ZP_08211164.1| phosphoribosyltransferase [Thermoanaerobacter ethanolicus JW 200]
gi|325994313|gb|EGD52739.1| phosphoribosyltransferase [Thermoanaerobacter ethanolicus JW 200]
Length = 229
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
++P C I I LC C S + FI + + + L ++
Sbjct: 3 FLDLLFPPKTTCIICKTAI-KTGYLCDKCKSTLKFIEGNRCNICGKPIDYEGTCLDCLEH 61
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Q S Y + L+ KY +LA A +M ++K+
Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGRFKYFKERELAPFFADYMADAVKKM 108
>gi|256750931|ref|ZP_05491815.1| phosphoribosyltransferase [Thermoanaerobacter ethanolicus CCSD1]
gi|256750266|gb|EEU63286.1| phosphoribosyltransferase [Thermoanaerobacter ethanolicus CCSD1]
Length = 229
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
++P C I I LC C S + FI + + + L ++
Sbjct: 3 FLDLLFPPKTTCIICKTAI-KTGYLCDKCKSTLKFIEGNRCNICGKPIDYEGTCLDCLEH 61
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Q S Y + L+ KY +LA A +M ++K+
Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGRFKYFKERELAPFFADYMADAVKKM 108
>gi|91205443|ref|YP_537798.1| competence protein F [Rickettsia bellii RML369-C]
gi|91068987|gb|ABE04709.1| Competence protein F [Rickettsia bellii RML369-C]
Length = 146
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----D 63
+ + L I P C S I++ CG CW K+ FI + + ++ +
Sbjct: 2 LVKVYNYLIDYILPQRCLSCSEILSSSGEFCGDCWQKLEFIAKPYCNICGQRFSVKILDN 61
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ K RS+ + + S +V KY D+T A A+
Sbjct: 62 AVCGRCYSKKPNYNLARSIFKFNEYSKKVVHQFKYQDKTIFAKTFAK 108
>gi|118581139|ref|YP_902389.1| competence protein F [Pelobacter propionicus DSM 2379]
gi|118503849|gb|ABL00332.1| competence protein F, putative [Pelobacter propionicus DSM 2379]
Length = 245
Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 5/106 (4%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNKD---NID 63
KS L + + P C + I L C C ++ T + D
Sbjct: 7 KSFFTALLNFLLPPHCHVCGEFIPRAGRLHICSSCRERMPAPTQPICPICGIPFQGAGHD 66
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
++ R+ L+ L+ KY+ RT L +
Sbjct: 67 HPCQSCLKHPPHFHAARAALLHEGPVRDLIHAFKYNARTHLRRPLG 112
>gi|307265486|ref|ZP_07547041.1| phosphoribosyltransferase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919440|gb|EFN49659.1| phosphoribosyltransferase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 229
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 3/107 (2%)
Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
++P C I I LC C S + FI + + + ++
Sbjct: 3 FLDLLFPPKTTCIICKTAI-KTGYLCDKCKSTLKFIEGNRCSICGKPTDYEGTCPDCLEH 61
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Q S Y + L+ KY +LA A +M ++K+
Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGRFKYFKERELAPFFADYMADAVKKM 108
>gi|167038183|ref|YP_001665761.1| phosphoribosyltransferase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039108|ref|YP_001662093.1| phosphoribosyltransferase [Thermoanaerobacter sp. X514]
gi|300913302|ref|ZP_07130619.1| phosphoribosyltransferase [Thermoanaerobacter sp. X561]
gi|307723684|ref|YP_003903435.1| phosphoribosyltransferase [Thermoanaerobacter sp. X513]
gi|320116592|ref|YP_004186751.1| phosphoribosyltransferase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166853348|gb|ABY91757.1| phosphoribosyltransferase [Thermoanaerobacter sp. X514]
gi|166857017|gb|ABY95425.1| phosphoribosyltransferase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|300889987|gb|EFK85132.1| phosphoribosyltransferase [Thermoanaerobacter sp. X561]
gi|307580745|gb|ADN54144.1| phosphoribosyltransferase [Thermoanaerobacter sp. X513]
gi|319929683|gb|ADV80368.1| phosphoribosyltransferase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 229
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 3/107 (2%)
Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
++P C I +I LC C S + FI + + + ++
Sbjct: 3 FLDLLFPPKTTCIICKTVI-KTGYLCDKCKSTLKFIEGNRCSICGKPIDYEGTCPDCLEH 61
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Q S Y + L+ KY +LA A +M ++K+
Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGRFKYFKERELAPFFADYMADAVKKM 108
>gi|328953683|ref|YP_004371017.1| phosphoribosyltransferase [Desulfobacca acetoxidans DSM 11109]
gi|328454007|gb|AEB09836.1| phosphoribosyltransferase [Desulfobacca acetoxidans DSM 11109]
Length = 239
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 6/94 (6%)
Query: 12 IIELFHCIYPSICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL-- 67
+ L P C ++ + +C CW ++ IT P
Sbjct: 6 LRALLDFFLPRFCLFCHAPLSLEVEHLICPDCWKELPLITTPYCSCCGAPFKGAVGPEHL 65
Query: 68 --KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
K P + R+ Y + LKY
Sbjct: 66 CQTCTIKPPPFDRARAAARYEGSIRDAIHRLKYQ 99
>gi|329847920|ref|ZP_08262948.1| phosphoribosyl transferase domain protein [Asticcacaulis
biprosthecum C19]
gi|328842983|gb|EGF92552.1| phosphoribosyl transferase domain protein [Asticcacaulis
biprosthecum C19]
Length = 272
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 13/126 (10%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRF----CLCGHCWSKIHFITATEHILKNNK 59
++ L ++P ++ + WS+I F+ +
Sbjct: 24 TWAHLRGTAGRLMDVVFPPHGLG---EVDEDGAGAVGMEAGRWSRIRFLDRDGCDMCARP 80
Query: 60 D------NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
++ P T+ R+ LY + S ++ K+ DR D M+ +W+
Sbjct: 81 FDGGLHLGVEGRCTACESDPFPFTRGRAACLYSEASKGVILGFKHGDRLDARPMLTRWLE 140
Query: 114 RVLEKI 119
R +
Sbjct: 141 RAATDV 146
>gi|163732997|ref|ZP_02140441.1| competence protein F, putative [Roseobacter litoralis Och 149]
gi|161393532|gb|EDQ17857.1| competence protein F, putative [Roseobacter litoralis Och 149]
Length = 175
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
M T+ R+ LY D + +V LK+ DR ++A A WM R +E +
Sbjct: 1 MITPRSWTKGRAALLYKDNARRMVLALKHGDRQEIAEPAALWMSRAIEDL 50
>gi|157827199|ref|YP_001496263.1| competence protein F [Rickettsia bellii OSU 85-389]
gi|157802503|gb|ABV79226.1| Competence protein F [Rickettsia bellii OSU 85-389]
Length = 193
Score = 73.4 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSM 70
+ I P C S I++ CG CW K+ FI + + ++ + +
Sbjct: 1 MIDYILPQRCLSCSEILSSSGEFCGDCWQKLEFIAKPYCNICGQRFSVKILDNAVCGRCY 60
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
K RS+ + + S +V KY D+T A A+
Sbjct: 61 SKKPNYNLARSIFKFNEYSKKVVHQFKYQDKTIFAKTFAK 100
>gi|329888704|ref|ZP_08267302.1| phosphoribosyl transferase domain protein [Brevundimonas diminuta
ATCC 11568]
gi|328847260|gb|EGF96822.1| phosphoribosyl transferase domain protein [Brevundimonas diminuta
ATCC 11568]
Length = 268
Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 7/122 (5%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+ + L + P + SR L WS++ F+ A D
Sbjct: 19 LASGARDTGRGLLDILLPPVAHD-SREAAASAGLSPDAWSRVAFLEAPVCDGCGAAFEYD 77
Query: 64 KD------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ + R+ +Y + S ++ K+ D+ A + A+W+ R
Sbjct: 78 GGDFAAERCAACVASPYAFGRARAACVYDEASRGIILKFKHGDQQQFAPLFARWISRSAA 137
Query: 118 KI 119
+
Sbjct: 138 PL 139
>gi|189184533|ref|YP_001938318.1| hypothetical protein OTT_1626 [Orientia tsutsugamushi str. Ikeda]
gi|189181304|dbj|BAG41084.1| hypothetical protein OTT_1626 [Orientia tsutsugamushi str. Ikeda]
Length = 248
Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 19 IYPSICPIYSRIINL--RFCLCGHCWSKIHFITATEHILKN----NKDNIDKDPLKSMQK 72
+P C ++I LC CW+KI+FIT D LK
Sbjct: 23 FFPRQCLTCQQLIQSALPAGLCSTCWNKINFITLPFCQKCGRALPYDYGADVICLKCCHT 82
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
R++ ++ + S L+ KY+D+ +A+M+AQ
Sbjct: 83 APNYELARALLIFNEDSKFLIHAFKYYDKPLIAMMLAQ 120
>gi|254504618|ref|ZP_05116769.1| Phosphoribosyl transferase domain protein [Labrenzia alexandrii
DFL-11]
gi|222440689|gb|EEE47368.1| Phosphoribosyl transferase domain protein [Labrenzia alexandrii
DFL-11]
Length = 200
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 50 ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
T ++ + +++ ++R+V Y + LV LK+ R +LA M
Sbjct: 2 GTPFTHDVGENALSP---RAIADPPEFDRLRAVAFYSGPAKDLVLALKFARRRELAEAMG 58
Query: 110 QWMFRVLEK 118
WM R +
Sbjct: 59 IWMARSGNE 67
>gi|148284486|ref|YP_001248576.1| competence protein F [Orientia tsutsugamushi str. Boryong]
gi|146739925|emb|CAM79923.1| competence protein F [Orientia tsutsugamushi str. Boryong]
Length = 249
Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 19 IYPSICPIYSRIINL--RFCLCGHCWSKIHFITATEHILKN----NKDNIDKDPLKSMQK 72
+P C ++I LC CW+KI+FIT D LK
Sbjct: 24 FFPRQCLTCQQLIQSALPAGLCSTCWNKINFITLPFCQKCGRALPYDYGADVICLKCCHA 83
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
R++ ++ + S L+ KY+D+ +A+M+AQ
Sbjct: 84 VPNYELARALLIFNEDSKFLIHAFKYYDKPLIAMMLAQ 121
>gi|294085486|ref|YP_003552246.1| putative competence protein F [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665061|gb|ADE40162.1| putative competence protein F (COMF) [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 238
Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---PLKSM 70
+L + + P +CP LC CW ++ I+ +
Sbjct: 12 QLANILLPHLCPHCRTFCEG-AGLCAACWQRLEQISTPFCSCCGRPLPYALPDTRCARCW 70
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
PL IR+ Y D++ LV K+ D L ++A+ + R +++
Sbjct: 71 VAPPPLASIRAACRYDDIASTLVIRYKHADALHLTPLLARLVRRFFDEL 119
>gi|67459283|ref|YP_246907.1| competence protein F [Rickettsia felis URRWXCal2]
gi|67004816|gb|AAY61742.1| Competence protein F [Rickettsia felis URRWXCal2]
Length = 118
Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----D 63
+ + + + I P C S I+ C CW K+ FI + + +I +
Sbjct: 2 LVKVYNSVINYILPQRCLSCSEILGGSGEFCSDCWKKLEFIARPYCSICGQRFSIKILDN 61
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
RS+ + + S +V K D+T A
Sbjct: 62 CICGNCYSNKPNYDLARSLFKFNEHSKKIVHQFKCQDKTIFA 103
>gi|297544021|ref|YP_003676323.1| phosphoribosyltransferase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841796|gb|ADH60312.1| phosphoribosyltransferase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 229
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
++P C I I LC C + + FI + + + L ++
Sbjct: 3 FLDLLFPPKTTCIICKAAI-KTGYLCDKCKTALKFIEDDRCNICGKPIDYEGTCLDCLEH 61
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Q S Y + L+ KY + +LA A +M ++K+
Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGQFKYFKKRELAPFFADYMADAVKKM 108
>gi|289577708|ref|YP_003476335.1| phosphoribosyltransferase [Thermoanaerobacter italicus Ab9]
gi|289527421|gb|ADD01773.1| phosphoribosyltransferase [Thermoanaerobacter italicus Ab9]
Length = 229
Score = 70.7 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Query: 15 LFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
++P C I I LC C + + FI + + + L ++
Sbjct: 3 FLDLLFPPKTTCIICKAAI-KTGYLCDKCKTALKFIEDDRCNICGKPIDYEGTCLDCLEH 61
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Q S Y + L+ KY + +LA A +M ++K+
Sbjct: 62 GHEFKQNISPFEYDGVVKDLIGQFKYFKKRELAPFFADYMADAVKKM 108
>gi|304317615|ref|YP_003852760.1| phosphoribosyltransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779117|gb|ADL69676.1| phosphoribosyltransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 229
Score = 70.3 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 15 LFHCIYPSI--CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
++P C + ++I +C C SK+ FI+ I+ + + M+
Sbjct: 3 FLDLLFPPKTNCILCGKMI-REGKICDDCESKLPFISGNTCIVCGKPIDTGEKCPDCMEY 61
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ ++ S Y + L+ KY+ +L+ A++M
Sbjct: 62 EHIFSRSISAFEYDETMKSLIARFKYYKERNLSEFFAEYM 101
>gi|302381420|ref|YP_003817243.1| phosphoribosyltransferase [Brevundimonas subvibrioides ATCC 15264]
gi|302192048|gb|ADK99619.1| phosphoribosyltransferase [Brevundimonas subvibrioides ATCC 15264]
Length = 249
Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 7/113 (6%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------P 66
L + P + L W+++ F+ D
Sbjct: 9 RGLADLVLPPMAHDSREAT-QAAGLTADAWNRVAFLEDPVCDGCGAAFEYDGGDFASERC 67
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ T+ R+ +Y D S L+ K+ D+ A + A+W+ R +
Sbjct: 68 AACLASPYRFTRCRAACVYDDASRGLILKYKHGDQQQFAGLFARWLGRAAAPL 120
>gi|53804513|ref|YP_113594.1| competence protein F [Methylococcus capsulatus str. Bath]
gi|53758274|gb|AAU92565.1| competence protein F [Methylococcus capsulatus str. Bath]
Length = 233
Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 3/94 (3%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQKDLPL 76
IYP C + R LCG C ++ T T + + + ++ P
Sbjct: 15 IYPPTCLLCGDDGQRRLDLCGACERQLP-RTGTACLRCGEALPEGAPSPCGRCLRHPPPF 73
Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
R+ Y + L+ LK+ R A + +
Sbjct: 74 DSCRAAFRYEEPIRHLIHGLKFGHRHACARTLGE 107
>gi|309390162|gb|ADO78042.1| phosphoribosyltransferase [Halanaerobium praevalens DSM 2228]
Length = 248
Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 8/109 (7%)
Query: 10 SIIIELFHCIYP--SICPIYSRIINLR--FCLCGHCWSKIHFITATEHILK----NNKDN 61
++ L +YP +C R + +C C +K FIT +
Sbjct: 2 KVLDILKDLVYPEKPVCLACGRRYDHSEIKAICDRCLAKFSFITEACPLCGREVIPAALI 61
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ ++ P RSV Y + ++ KY R DLA ++
Sbjct: 62 EGHPCPECEKEKPPYNFARSVFSYAGYAREVLLEYKYGHRPDLAKPFSR 110
>gi|4768852|gb|AAD29646.1|AF124757_6 competence protein F [Zymomonas mobilis subsp. mobilis ZM4]
Length = 258
Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 35 FCLCGHCWSKIHFITATEHILKNNK----DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSC 90
C CW +HF+ I + + +Q ++ + Y ++S
Sbjct: 18 HSFCVECWQSLHFLVEPACIQCGFPLPRDQQYEPLCGRCLQHPPSFDRMNAAVAYDEISR 77
Query: 91 VLVRLLKYHDRTDLAIMMAQWMFR 114
L+ KY +T LA MA+ M R
Sbjct: 78 QLILRCKYGKQTMLARDMAKLMMR 101
>gi|189425986|ref|YP_001953163.1| competence protein F [Geobacter lovleyi SZ]
gi|189422245|gb|ACD96643.1| competence protein F, putative [Geobacter lovleyi SZ]
Length = 243
Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNKD---NI 62
++++ L + P C I + + L C C + + +
Sbjct: 5 LRTLATALQDLLLPPRCHICHKPVPDAGRLHICPDCRVGLPLAGSPVCSICGIPFQSAGD 64
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
D + + P T R+ Y L+ KY
Sbjct: 65 DHPCSRCIAAPPPYTAARAALRYEGACRDLIHHFKY 100
>gi|85859102|ref|YP_461304.1| amidophosphoribosyltransferase family protein [Syntrophus
aciditrophicus SB]
gi|85722193|gb|ABC77136.1| amidophosphoribosyltransferase family protein [Syntrophus
aciditrophicus SB]
Length = 239
Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 6/98 (6%)
Query: 8 VKSIIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
+ S+ + +P C ++ C C +I F++ + +
Sbjct: 1 MNSLFKGIADLFFPPRCLSCHELLISGESGGFCPKCLQRISFLSPPICASCGAPLSPEAG 60
Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
L+ P + RSV Y + + LKY
Sbjct: 61 KDALCLRCAATRPPFERCRSVGRYETVLLEAIHDLKYR 98
>gi|197120667|ref|YP_002132618.1| phosphoribosyltransferase [Anaeromyxobacter sp. K]
gi|196170516|gb|ACG71489.1| phosphoribosyltransferase [Anaeromyxobacter sp. K]
Length = 228
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 3/106 (2%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+++ + L +YP C + C C + + +
Sbjct: 2 LRAAVRALLDLVYPPRCAACGEPVTEE-PFCDVCAGALEPV--PPGCDRCGAPGPGPACG 58
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ +R+ L+ V LKY R DLA + W+
Sbjct: 59 ACLAAPPAFDAVRAGGLFGGPLADAVHALKYGGRPDLARPLGAWLA 104
>gi|68171519|ref|ZP_00544900.1| competence protein F [Ehrlichia chaffeensis str. Sapulpa]
gi|88658293|ref|YP_506971.1| putative competence protein F [Ehrlichia chaffeensis str. Arkansas]
gi|67999066|gb|EAM85736.1| competence protein F [Ehrlichia chaffeensis str. Sapulpa]
gi|88599750|gb|ABD45219.1| putative competence protein F [Ehrlichia chaffeensis str. Arkansas]
Length = 230
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-ILKNNKDNIDKDPLKS 69
++ ++F+ I+P C +I+ LC C S I+F+ + N K
Sbjct: 1 MLGKIFNIIFPKTCANCECVISSNHDLCSTCKSNINFLCDNYCIACGCSLPNKVSICGKC 60
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ T++ SV Y S ++ LK+ D T +WM
Sbjct: 61 VPNPPKFTKLESVFSYNKHSKNMILNLKFSDNTLHVKTYGKWM 103
>gi|86156665|ref|YP_463450.1| phosphoribosyltransferase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773176|gb|ABC80013.1| phosphoribosyltransferase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 228
Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 3/106 (2%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+++ + L +YP C + C C + + +
Sbjct: 2 LRAAVRALLDLVYPPRCAACGEPVAEE-PFCEVCAGALEPV--PPGCARCGAPGAGPACG 58
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ +R+ L+ V LKY R DLA + W+
Sbjct: 59 ACLAAPPAFDAVRAGGLFGGPLADAVHALKYGGRPDLARPLGAWLA 104
>gi|220915379|ref|YP_002490683.1| phosphoribosyltransferase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953233|gb|ACL63617.1| phosphoribosyltransferase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 228
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 3/106 (2%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+++ + L +YP C + C C + + +
Sbjct: 2 LRAAVRALLDLVYPPRCAACGEPVAEE-PFCEVCAGALEPV--PPGCDRCGAPGPGPACG 58
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ +R+ L+ V LKY R DLA + W+
Sbjct: 59 ACLAAPPAFDVVRAGGLFGGPLADAVHALKYGGRPDLARPLGAWLA 104
>gi|197120132|ref|YP_002140559.1| amidophosphoribosyltransferase [Geobacter bemidjiensis Bem]
gi|197089492|gb|ACH40763.1| amidophosphoribosyltransferase, putative [Geobacter bemidjiensis
Bem]
Length = 239
Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 7/97 (7%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNKDNIDKD--- 65
L +P +C + I L C C K+ F+T + DK
Sbjct: 2 FFRPLLDLFFPPLCHVCRAFIPEAGELFICADCLDKVTFLTTPLCTICGAPFATDKGSNH 61
Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101
+ P RS + L+ KY R
Sbjct: 62 TCGACLLH-PPFHTCRSALILEGAVQQLIHRFKYGGR 97
>gi|78224524|ref|YP_386271.1| phosphoribosyltransferase [Geobacter metallireducens GS-15]
gi|78195779|gb|ABB33546.1| Phosphoribosyltransferase [Geobacter metallireducens GS-15]
Length = 242
Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 6/105 (5%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNK----DNIDK 64
++ ++P +C + + L C C + IT+ + ID
Sbjct: 3 LLRAFLDVLFPPLCHLCKAPVPGAGPLHLCDACLGAMTPITSPLCPVCGVPHRTEGGIDH 62
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
M P +R L+ L+ KY + L +A
Sbjct: 63 LCGSCMLTPPPFDGVRGALLFDGPLQELIHRHKYGHKVHLRRPLA 107
>gi|253702441|ref|YP_003023630.1| phosphoribosyltransferase [Geobacter sp. M21]
gi|251777291|gb|ACT19872.1| phosphoribosyltransferase [Geobacter sp. M21]
Length = 239
Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 29/97 (29%), Gaps = 7/97 (7%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNKDNIDKD--- 65
+ L +P +C + I L C C K+ F+T + DK
Sbjct: 2 LFRPLLDLFFPPLCHVCRAFIPEAGELFICADCLDKVTFLTTPLCPVCGAPFATDKGSDH 61
Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101
+ P RS L ++ KY R
Sbjct: 62 TCGACLLH-PPFHTCRSALLLEGGVQQMIHRFKYGGR 97
>gi|39995235|ref|NP_951186.1| competence protein F [Geobacter sulfurreducens PCA]
gi|39981997|gb|AAR33459.1| competence protein F, putative [Geobacter sulfurreducens PCA]
gi|298504239|gb|ADI82962.1| amidophosphoribosyltransferase, putative [Geobacter sulfurreducens
KN400]
Length = 238
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 6/105 (5%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL--CGHCWSKIHFITATEHILKNNK----DNIDK 64
I+ L ++P +C + I L C C ++ I + + ID
Sbjct: 2 IVRALLDILFPPLCHLCRAPIPGAEKLHLCPACLARAKPIGSPLCTVCGVPFATEGGIDH 61
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ P R+ L+ LV KY + L +A
Sbjct: 62 RCGDCIVSPPPYEGARAAYLFEGPVQELVHRFKYGHKAHLRRPLA 106
>gi|148260495|ref|YP_001234622.1| phosphoribosyltransferase [Acidiphilium cryptum JF-5]
gi|146402176|gb|ABQ30703.1| phosphoribosyltransferase [Acidiphilium cryptum JF-5]
Length = 217
Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Query: 33 LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQIRSVTLYCDMSCV 91
LC C+ + FIT R+ Y +
Sbjct: 3 ADGLLCVSCFVETSFITDPVCGQCGLPLAEPAPLCTSCDWAPPTFRSARAALQYNAAAKR 62
Query: 92 LVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
L+ KY DR +LAI +A+ + R +++
Sbjct: 63 LILPFKYADRPELAIGLARLLLRPGKEL 90
>gi|323706361|ref|ZP_08117926.1| phosphoribosyltransferase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534323|gb|EGB24109.1| phosphoribosyltransferase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 229
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Query: 15 LFHCIYPSI--CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
++P C + ++I +C C +K+ FI + M+
Sbjct: 3 FLDLLFPPKTNCLLCGKVI-KEGKICFECENKLPFIIGNRCSVCGKPIRDGDRCPDCMEI 61
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ T+ S Y + L+ KY+ LA A++M+R +++
Sbjct: 62 NHVFTRSISPFEYDETIKSLIARFKYYKERSLAEFFAEYMYRCIQE 107
>gi|221233810|ref|YP_002516246.1| amidophosphoribosyltransferase family protein [Caulobacter
crescentus NA1000]
gi|220962982|gb|ACL94338.1| amidophosphoribosyltransferase family protein [Caulobacter
crescentus NA1000]
Length = 208
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 45 IHFITATEHILKNNK----DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHD 100
+ FI D + K + R+ +Y + S LV +LK+ D
Sbjct: 1 MTFIDDPVCDGCGLAMAYVDAAAERCPACQAKPKTFARARAACVYDEHSRDLVLMLKHAD 60
Query: 101 RTDLAIMMAQWMFRVLEKI 119
R DLA + A+W+ R ++
Sbjct: 61 RVDLAGLFARWLSRAAGEL 79
>gi|326387515|ref|ZP_08209122.1| phosphoribosyltransferase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208004|gb|EGD58814.1| phosphoribosyltransferase [Novosphingobium nitrogenifigens DSM
19370]
Length = 281
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 19/121 (15%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKD---- 65
+ + ++P CP+ + LC CW + + D I +
Sbjct: 7 LAPIIDLVFPPRCPLCGAALAQHGGLCVECWGGLAIPGEPACSQCQRPLPDRIAQQGADA 66
Query: 66 -------------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
M + I + TLY + S L+ K+ R L ++ + M
Sbjct: 67 ALATADAARGAWVCAPCMARPPRHEGIAAATLYNEASRRLIMAFKHGRRIGLGPLLVRLM 126
Query: 113 F 113
Sbjct: 127 V 127
>gi|58038532|ref|YP_190496.1| competence protein F [Gluconobacter oxydans 621H]
gi|58000946|gb|AAW59840.1| Competence protein F [Gluconobacter oxydans 621H]
Length = 228
Score = 64.6 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 27/93 (29%), Gaps = 6/93 (6%)
Query: 33 LRFCLCGHCWSKIHFITATEHILKNNK------DNIDKDPLKSMQKDLPLTQIRSVTLYC 86
CG C+ H I + R+ +Y
Sbjct: 2 TEGAFCGTCFQAAHRIVSPSCHRCGVPLENEGLGGPQNCCAACQAHPPVWRSARAAFVYD 61
Query: 87 DMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
S L+ LKY D T+ A +M + M E +
Sbjct: 62 TWSRRLILPLKYSDHTENAAVMGRQMASAAEDM 94
>gi|220933320|ref|YP_002512219.1| competence protein F [Thioalkalivibrio sp. HL-EbGR7]
gi|219994630|gb|ACL71232.1| competence protein F [Thioalkalivibrio sp. HL-EbGR7]
Length = 237
Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 2/111 (1%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIH-FITATEHILKNNKDNIDKD 65
+ ++ L +YP +C + LC C + F +
Sbjct: 8 SAGGLLGALLRWLYPPVCLLCRAPGAGDLDLCPGCRGDLPWFGHGCPACARPLPPGAGPL 67
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ-WMFRV 115
+++ P ++ Y L+ LKY R A ++ + W
Sbjct: 68 CGACLKRPPPFDATHALFHYAAPVDRLITGLKYRGRLSHARLLGELWASHA 118
>gi|222053719|ref|YP_002536081.1| amidophosphoribosyltransferase-like protein [Geobacter sp. FRC-32]
gi|221563008|gb|ACM18980.1| amidophosphoribosyltransferase-like protein [Geobacter sp. FRC-32]
Length = 239
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 6/110 (5%)
Query: 11 IIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNK----DNIDK 64
+ L I+P +C + I LC C ++H + + + D ID
Sbjct: 1 MFRSLLDIIFPPLCHLCRVYIPNAGDVHLCTSCLEQLHPVASPLCPICGVPFATEDGIDH 60
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ R+ ++ L+ KY +T L+ +A R
Sbjct: 61 RCGACSVRRPAYVAARAAFVFDGPIQELIHRFKYAHKTHLSRPLALMTAR 110
>gi|312142839|ref|YP_003994285.1| phosphoribosyltransferase [Halanaerobium sp. 'sapolanicus']
gi|311903490|gb|ADQ13931.1| phosphoribosyltransferase [Halanaerobium sp. 'sapolanicus']
Length = 246
Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 37/112 (33%), Gaps = 9/112 (8%)
Query: 11 IIIELFHCIYP--SICPIYSRIINLRF--CLCGHCWSKIHFITATEHILK----NNKDNI 62
++ L YP +C R + +C C S+ FI +
Sbjct: 1 MLEFLKDLFYPEKKVCLACERRYDHSEIEGMCDRCLSRFSFINHFCSVCGREVIPATLIG 60
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
D + +K P RSV Y ++ KY R DLA A M R
Sbjct: 61 DHPCPECQEKRPPYNFARSVFTYAGYPREVLLEFKYGHRPDLAKPFAH-MLR 111
>gi|312127293|ref|YP_003992167.1| phosphoribosyltransferase [Caldicellulosiruptor hydrothermalis 108]
gi|311777312|gb|ADQ06798.1| phosphoribosyltransferase [Caldicellulosiruptor hydrothermalis 108]
Length = 231
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 9/111 (8%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69
+ +L +P C R+ C C I FI+ D +
Sbjct: 1 MEKLIEFFFPPRCAFCGRLGKSP---CDDCKKNIRFISGNTCQKCGIPIGDTTLQFCSSC 57
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLK----YHDRTDLAIMMAQWMFRVL 116
++++ ++ V Y + V L K Y + + +MA+ +
Sbjct: 58 LRENFAFERVFPVFYYEGVVRRGVHLFKYRGFYQNAITFSRLMAKKILEAG 108
>gi|56417308|ref|YP_154382.1| hypothetical protein AM1346 [Anaplasma marginale str. St. Maries]
gi|222475671|ref|YP_002564088.1| Competence protein F (comF) [Anaplasma marginale str. Florida]
gi|56388540|gb|AAV87127.1| hypothetical protein AM1346 [Anaplasma marginale str. St. Maries]
gi|222419809|gb|ACM49832.1| Competence protein F (comF) [Anaplasma marginale str. Florida]
Length = 249
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 1/113 (0%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFI-TATEHILKNNK 59
+ + +++++ ++ ++P IC II +C C I F+ +
Sbjct: 9 LTGFLLLLRAVVSKICDALFPDICANCRTIIPRGKVVCDACTRAIRFLWEDFCVVCGAVA 68
Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ ++ I SV +Y + S +V LK+ D A+WM
Sbjct: 69 QRHTNTCAGCAARPTHISAINSVFVYDECSKNMVLRLKFGDDLFHVRAYARWM 121
>gi|304322117|ref|YP_003855760.1| competence protein F [Parvularcula bermudensis HTCC2503]
gi|303301019|gb|ADM10618.1| competence protein F [Parvularcula bermudensis HTCC2503]
Length = 284
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 12/123 (9%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
+++ + ++PS CP+ +++ L W+ + +TA + D
Sbjct: 27 RALAARVGEVVFPSTCPVTGTLVSSPGTLSPAGWASLDHLTAPWCRQCGFPFTLVGDGPL 86
Query: 69 SMQ-------KDL-----PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
+ L R+ Y ++S L+ +KY DR+D + + + RV
Sbjct: 87 CLPCTGEGGLAPRLVGKDRLDAFRAPLAYDEVSADLILAIKYADRSDSLRVAGRLLARVA 146
Query: 117 EKI 119
+ +
Sbjct: 147 QAL 149
>gi|42520743|ref|NP_966658.1| competence protein F, interruption-N [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410483|gb|AAS14592.1| competence protein F, interruption-N [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 103
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKS 69
++ + + I+PS+C II+ LC C KI+F+T + + + K
Sbjct: 5 LLKKATNLIFPSVCVSCECIIDENLNLCSECNKKINFLTKHYCNVCGVVISDNIYTCGKC 64
Query: 70 MQKDLPLTQIRSVTLYCDMSCVL 92
+ P +RSV Y S +
Sbjct: 65 IINPPPFKVLRSVFAYDQHSRNM 87
>gi|255004790|ref|ZP_05279591.1| Competence protein F (comF) [Anaplasma marginale str. Virginia]
Length = 237
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFI-TATEHILKNNKDNIDKDP 66
+++++ ++ ++P IC II +C C I F+ +
Sbjct: 4 LRAVVSKICDALFPDICANCRTIIPRGKVVCDACTRAIRFLWEDFCVVCGAVAQRHTNTC 63
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ ++ I SV +Y + S +V LK+ D A+WM
Sbjct: 64 AGCAARPTHISAINSVFVYDECSKNMVLRLKFGDDLFHVRAYARWM 109
>gi|182415338|ref|YP_001820404.1| competence protein F, putative [Opitutus terrae PB90-1]
gi|177842552|gb|ACB76804.1| competence protein F, putative [Opitutus terrae PB90-1]
Length = 244
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 7/95 (7%)
Query: 12 IIELFHCIYPSICPIYSRIINLR---FCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65
+ L ++P +C ++ LC C +++ ++ + +
Sbjct: 8 LRGLSDVVFPPLCVHCRGLVPSEAEFRHLCPACSAQLDYVRPPHCSTCGHPFYGVVEGER 67
Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ R+ L + LV LKYH
Sbjct: 68 MCPHCEGLAPAFREGRTAVLLKGPARGLVHELKYH 102
>gi|302871564|ref|YP_003840200.1| phosphoribosyltransferase [Caldicellulosiruptor obsidiansis OB47]
gi|302574423|gb|ADL42214.1| phosphoribosyltransferase [Caldicellulosiruptor obsidiansis OB47]
Length = 231
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 5/90 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69
+ +L +P C ++ C C I FI+ D
Sbjct: 1 MEKLIEFFFPPRCAFCGKLGKSP---CEDCKKNIRFISGNACQKCGIPIGDTALPFCPSC 57
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++++ ++ V Y + V L KY
Sbjct: 58 LRENFAFERVFPVFYYEGVVRKGVHLFKYR 87
>gi|254995474|ref|ZP_05277664.1| Competence protein F (comF) [Anaplasma marginale str. Mississippi]
gi|255003665|ref|ZP_05278629.1| Competence protein F (comF) [Anaplasma marginale str. Puerto Rico]
gi|269959168|ref|YP_003328957.1| putative amidophosphoribosyltransferase [Anaplasma centrale str.
Israel]
gi|269848999|gb|ACZ49643.1| putative amidophosphoribosyltransferase [Anaplasma centrale str.
Israel]
Length = 235
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFI-TATEHILKNNKDNIDKDP 66
+++++ ++ ++P IC II +C C I F+ +
Sbjct: 2 LRAVVSKICDALFPDICANCRTIIPRGKVVCDACTRAIRFLWEDFCVVCGAVAQRHTNTC 61
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ ++ I SV +Y + S +V LK+ D A+WM
Sbjct: 62 AGCAARPTHISAINSVFVYDECSKNMVLRLKFGDDLFHVRAYARWM 107
>gi|223939439|ref|ZP_03631317.1| competence protein F, putative [bacterium Ellin514]
gi|223891931|gb|EEF58414.1| competence protein F, putative [bacterium Ellin514]
Length = 247
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 6/125 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYS--RIINLRFCLCGHCWSKIHFITATEHILKNN 58
M + ++++K + +YP +C I R + CW K+ FI
Sbjct: 1 MISTLKSLKPWLDAGLSFVYPEVCQICGAERASASEGFVGPLCWEKVRFIQPPFCARCGL 60
Query: 59 KDNIDK----DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
D + + +L RS M +V KY +A + R
Sbjct: 61 PYEGDITTTFECHNCKEMELHFRTARSAVTAEGMVLDIVHRYKYQRHMWFEAFLADLLIR 120
Query: 115 VLEKI 119
KI
Sbjct: 121 QAAKI 125
>gi|218779784|ref|YP_002431102.1| phosphoribosyltransferase [Desulfatibacillum alkenivorans AK-01]
gi|218761168|gb|ACL03634.1| phosphoribosyltransferase [Desulfatibacillum alkenivorans AK-01]
Length = 252
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 10/122 (8%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINL------RFCLCGHCWSKIHFITATEHILKN 57
+ +VK + +YP C I LC C + +
Sbjct: 2 LTASVKVLKNAFLDALYPPKCAACGEFIPEAPPSPLPKFLCPDCLMDYTPAASPLCLKCG 61
Query: 58 ----NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + D ++K + R+ +Y + LKY+ +T LA M +
Sbjct: 62 MPFVSPEGPDHLCGGCLEKKSRFNKARAAGVYDGPLRTAIHRLKYNQKTALAAPMGGMLE 121
Query: 114 RV 115
+
Sbjct: 122 QA 123
>gi|332186893|ref|ZP_08388635.1| hypothetical protein SUS17_1939 [Sphingomonas sp. S17]
gi|332013226|gb|EGI55289.1| hypothetical protein SUS17_1939 [Sphingomonas sp. S17]
Length = 216
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 2/85 (2%)
Query: 32 NLRFCLCGHCWSKIHFITATEHIL--KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMS 89
C CW + F+ A+ + + I + Y ++
Sbjct: 2 ENDHRFCAACWGGLRFLDASGCPGCGMPGEGGTALRCGPCLADPPAHAGIYAAVAYGPIA 61
Query: 90 CVLVRLLKYHDRTDLAIMMAQWMFR 114
L LK+ R +A MA M R
Sbjct: 62 RELPIRLKHGGRIGVADTMAGPMAR 86
>gi|312622112|ref|YP_004023725.1| phosphoribosyltransferase [Caldicellulosiruptor kronotskyensis
2002]
gi|312202579|gb|ADQ45906.1| phosphoribosyltransferase [Caldicellulosiruptor kronotskyensis
2002]
Length = 231
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 5/90 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69
+ +L +P C R+ C C I FI+ D+
Sbjct: 1 MEKLIEFFFPPRCAFCGRLGKSP---CDDCKKNIRFISGNTCQKCGIPIGDSDLPVCSSC 57
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++++ ++ V Y + V L KY
Sbjct: 58 LRENFAFEKVFPVFYYEGVVRRGVHLFKYR 87
>gi|222529664|ref|YP_002573546.1| phosphoribosyltransferase [Caldicellulosiruptor bescii DSM 6725]
gi|222456511|gb|ACM60773.1| phosphoribosyltransferase [Caldicellulosiruptor bescii DSM 6725]
Length = 231
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 5/90 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69
+ +L +P C ++ LC C I FI+ D+
Sbjct: 1 MEKLIEFFFPPRCAFCGKLGKS---LCDDCKKNIRFISGNTCQKCGIPIGDSDLPFCPSC 57
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++++ ++ V Y + V L KY
Sbjct: 58 LRENFAFEKVFPVFYYEGVVRRGVHLFKYR 87
>gi|56475996|ref|YP_157585.1| hypothetical protein ebA1065 [Aromatoleum aromaticum EbN1]
gi|56312039|emb|CAI06684.1| conserved hypothetical protein,predicted phosphoribosyltransferase
family [Aromatoleum aromaticum EbN1]
Length = 236
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 2/110 (1%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
M ++ ++ + + P C + + + LC C + + +
Sbjct: 1 MSNVLDALRFRARRIADLLMPQECFVCGSM-SGAAALCSACRNDLP-RQPASCPVCAVPT 58
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + R+ Y +V+ LKY R LA A+
Sbjct: 59 VEGATCGRCLHNPPAFDASRAAFAYAFPVDRIVQGLKYRHRLALANFFAE 108
>gi|225164226|ref|ZP_03726500.1| competence protein F, putative [Opitutaceae bacterium TAV2]
gi|224801165|gb|EEG19487.1| competence protein F, putative [Opitutaceae bacterium TAV2]
Length = 257
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 29/105 (27%), Gaps = 13/105 (12%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC---------LCGHCWSKIHFITATEHILKNN 58
++ ++ L ++P C ++ +C C I + +
Sbjct: 4 LRRLVRGLVDVVFPPRCVHCHGLVEHSSAPDASQPLRHVCLKCAPFIRRVQPPHCTTCGH 63
Query: 59 KDNIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + R+ L+ + LV LKY
Sbjct: 64 PFFGEVEGEHICEHCEGLHPEFNAGRTAVLFRGPARSLVHELKYQ 108
>gi|302391038|ref|YP_003826858.1| phosphoribosyltransferase [Acetohalobium arabaticum DSM 5501]
gi|302203115|gb|ADL11793.1| phosphoribosyltransferase [Acetohalobium arabaticum DSM 5501]
Length = 238
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 4/100 (4%)
Query: 15 LFHCIYP--SICPIYSR--IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ +YP + C +++ + LC C +I +IT + +
Sbjct: 1 MLDLVYPEPAKCLYCDEDNLVSDQIQLCRDCLERIDYITDNYCSKCGKLLDEGPECSTCQ 60
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ Q R+ LY + KY LA + +
Sbjct: 61 EHKYYFDQARAAALYSGGLVDYIHQFKYQGEQILAKPLGR 100
>gi|226324394|ref|ZP_03799912.1| hypothetical protein COPCOM_02175 [Coprococcus comes ATCC 27758]
gi|225206842|gb|EEG89196.1| hypothetical protein COPCOM_02175 [Coprococcus comes ATCC 27758]
Length = 246
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 9/103 (8%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINL-------RFCLCGHCWSKIHFITATEHILKNNK- 59
+K + + IYPS CP I++ +C C K+ +I +
Sbjct: 4 LKKVKETILELIYPSKCPFCGEIVSAGKKHSMEHNGICKACREKLPYIGEVRCMCCGKPL 63
Query: 60 -DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101
D ++ ++ RS+ ++ D V +KY +R
Sbjct: 64 TDPAEEYCYDCTRQKHLFVDGRSLWVHKDAVENAVYAMKYQNR 106
>gi|116751311|ref|YP_847998.1| phosphoribosyltransferase [Syntrophobacter fumaroxidans MPOB]
gi|116700375|gb|ABK19563.1| phosphoribosyltransferase [Syntrophobacter fumaroxidans MPOB]
Length = 259
Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 21 PSICPIYSR--IINLRFCLCGHCWSKIHFITATEHI-----LKNNKDNIDKDPLKSMQKD 73
P C + + C C +++ +IT + + D +
Sbjct: 19 PRRCAGCRNTWLRSQEGFWCERCRAELPWITHPLCPRCGRPYPGSPASPDHRCGDCLLGA 78
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAI 106
P RS TLY + + LK+ + + A
Sbjct: 79 YPFDSARSATLYTGVVRDRIHQLKFGCQVEWAP 111
>gi|218960908|ref|YP_001740683.1| putative gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Candidatus Cloacamonas acidaminovorans]
gi|167729565|emb|CAO80477.1| putative gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Candidatus Cloacamonas acidaminovorans]
Length = 240
Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Query: 15 LFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
+ + P C + RI + +C C +K++ I + +++ + + +
Sbjct: 16 ILELLIPPACLVCGNRIDDRYQVICPDCEAKLYLIGEGTCPVCGSENK-ELPCEVCAEGN 74
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKY 98
SV Y L+ +LKY
Sbjct: 75 FAFDSAISVFRYSGPVRDLIHILKY 99
>gi|253579910|ref|ZP_04857178.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848909|gb|EES76871.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 234
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 1/112 (0%)
Query: 8 VKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+K + + YP CP+ +I+ + R +C C ++ I +
Sbjct: 1 MKRFLNMVADIFYPRCCPVCQKILADQRRMICPECEKELRPIGHPRCYKCGKPIETGEYC 60
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ Q R + +Y + V KY+ + A+ M+R +K
Sbjct: 61 RDCQKHRHMYEQGRGIFVYDGIMRRSVTRYKYYGCREYGDFYARAMYRYAQK 112
>gi|291561987|emb|CBL40798.1| Predicted amidophosphoribosyltransferases [butyrate-producing
bacterium SS3/4]
Length = 236
Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 14 ELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSM 70
E+ +YP CP+ I +C C K+ F+ + K +D + M
Sbjct: 5 EILDVLYPRRCPVCGDITGGSGRMICPDCLRKLSFVKSPVCKKCGKEIEDESMEFCPDCM 64
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ ++ Y + + + +KY
Sbjct: 65 RHPRAFEYGIALLNYDEAARHSMAQIKY 92
>gi|312135429|ref|YP_004002767.1| phosphoribosyltransferase [Caldicellulosiruptor owensensis OL]
gi|311775480|gb|ADQ04967.1| phosphoribosyltransferase [Caldicellulosiruptor owensensis OL]
Length = 231
Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 5/90 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69
+ +L +P C R+ C C I FI+ D
Sbjct: 1 MEKLIEFFFPPRCAFCGRLGKSP---CDDCKKNIRFISGNTCQKCGIPIGDTALPFYPSC 57
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++++ ++ V Y + V L KY
Sbjct: 58 LRENFAFERVFPVFYYEGVIRRGVHLFKYR 87
>gi|312793874|ref|YP_004026797.1| phosphoribosyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181014|gb|ADQ41184.1| phosphoribosyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 231
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 9/111 (8%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69
+ ++ +P C R+ C +C I FI+ D
Sbjct: 1 MEKIIEFFFPPRCAFCGRLGKSP---CDNCKKNIKFISGNTCQKCGIPIGDTTLLFCPSC 57
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLK----YHDRTDLAIMMAQWMFRVL 116
++++ ++ V Y + V L K Y + + +MA+ +
Sbjct: 58 LRENFAFERVFPVFYYEGVVRRGVHLFKYRGFYQNAITFSRLMAKKIIEAG 108
>gi|220932484|ref|YP_002509392.1| amidophosphoribosyltransferase [Halothermothrix orenii H 168]
gi|219993794|gb|ACL70397.1| amidophosphoribosyltransferase [Halothermothrix orenii H 168]
Length = 243
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 11 IIIELFHCIYPSI--CPIYSR---IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
II IYP C + R I + LC C S IHFIT + ++
Sbjct: 3 IIEFFLDIIYPPENHCLVCGRKLTIFSELTGLCQECLSNIHFITESCSRCGREVEDKRNI 62
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM 108
+ I S Y ++ ++ K+ R +L +
Sbjct: 63 CSYCKTFEPAYDFIHSGASYDGITRQMLLEFKFKQRKELKKPL 105
>gi|312877563|ref|ZP_07737522.1| phosphoribosyltransferase [Caldicellulosiruptor lactoaceticus 6A]
gi|311795638|gb|EFR12008.1| phosphoribosyltransferase [Caldicellulosiruptor lactoaceticus 6A]
Length = 231
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 5/90 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69
+ ++ +P C R+ C +C I FI+ D
Sbjct: 1 MEKIIEFFFPPRCAFCGRLGKSP---CDNCKKNIKFISGNTCQKCGIPIGDTTLLFCPSC 57
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++++ ++ V Y + V L KY
Sbjct: 58 LRENFAFERVFPVFYYEGVVRRGVHLFKYR 87
>gi|281356590|ref|ZP_06243081.1| phosphoribosyltransferase [Victivallis vadensis ATCC BAA-548]
gi|281316717|gb|EFB00740.1| phosphoribosyltransferase [Victivallis vadensis ATCC BAA-548]
Length = 238
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 11/106 (10%)
Query: 19 IYPSICPIYSRIINLRFC----LCGHCWSKIHFITATEHILKNNK-DNIDKDPLKSMQKD 73
++P CP+ +C C + D + K + ++
Sbjct: 14 LFP--CPLCR---TGDGGGRNRICPECRKEFRVFEEPFCPGCGGTLDGLMAVCGKCLAEE 68
Query: 74 -LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
P R++ Y + ++ K+ R +LA + + L+
Sbjct: 69 KRPWVGARTLFEYRGAARRMLHEFKFGGRPELARPLGELAAEALQG 114
>gi|301059590|ref|ZP_07200502.1| ComF family protein [delta proteobacterium NaphS2]
gi|300446355|gb|EFK10208.1| ComF family protein [delta proteobacterium NaphS2]
Length = 246
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 12/114 (10%)
Query: 12 IIELFHCIYPSICPIYSRII--------NLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+ +L H IYP C + + + ++ +C C + I A + N D
Sbjct: 4 LNQLAHIIYPPRCILCNDFLWRAPFDAGDVSSSVCQSCLRGFNAIEAPFCTICGKPFNSD 63
Query: 64 K----DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
++ + Y V LKY +T +A M ++
Sbjct: 64 AIENHPCEDCLRTPPYFQAAYAPYRYEGPILEAVLKLKYGGKTFVADAMGPYLA 117
>gi|73666726|ref|YP_302742.1| competence protein F [Ehrlichia canis str. Jake]
gi|72393867|gb|AAZ68144.1| competence protein F [Ehrlichia canis str. Jake]
Length = 230
Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 3/104 (2%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN--NKDNIDKDPLK 68
++ ++ + I+P C + LC C + I F+ I D + K
Sbjct: 1 MLGKIINIIFPRTCANCECTVPHYLDLCSICKNGIDFLHDNYCIGCGCRLPDGLSI-CGK 59
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
T++ SV Y S ++ LK+ D T +WM
Sbjct: 60 CTVAPPKFTKLESVFSYNQYSKNMILNLKFFDNTLHIKTYGKWM 103
>gi|163742650|ref|ZP_02150036.1| competence protein F, putative [Phaeobacter gallaeciensis 2.10]
gi|161384235|gb|EDQ08618.1| competence protein F, putative [Phaeobacter gallaeciensis 2.10]
Length = 174
Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
M P Q R+ Y + L+ LK+ DRT++
Sbjct: 1 MAHPRPWQQGRAALSYEGTARRLILALKHGDRTEI 35
>gi|302384834|ref|YP_003820656.1| phosphoribosyltransferase [Clostridium saccharolyticum WM1]
gi|302195462|gb|ADL03033.1| phosphoribosyltransferase [Clostridium saccharolyticum WM1]
Length = 236
Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Query: 15 LFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKD---PLKSM 70
++P CP+ I+ + L C C +K+ F+ K K+ I L +
Sbjct: 6 FIDFLFPRRCPVCDGIVMPKGGLICPPCVAKLSFV-RDPVCKKCGKEIISPHMEYCLDCI 64
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ R++ Y D + + +KY
Sbjct: 65 RHKRTFEYGRALMNYDDKAGNSIARIKY 92
>gi|323703018|ref|ZP_08114674.1| phosphoribosyltransferase [Desulfotomaculum nigrificans DSM 574]
gi|323532031|gb|EGB21914.1| phosphoribosyltransferase [Desulfotomaculum nigrificans DSM 574]
Length = 253
Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 12/118 (10%)
Query: 8 VKSIIIELFHCIYP--SICPIYSRIINLRFCLCGHC------WSKIHFITATEHILKNNK 59
+ ++ LF+ I+P C + +CGHC W+
Sbjct: 1 MHPLLEALFNLIFPTRPGCQLCGGP--GAEAVCGHCQEWLARWAGQP--KCLVCGRPLTG 56
Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ + ++ P R+ Y V LKY + LA ++A+ M + ++
Sbjct: 57 RDRGPKCRECYRQRPPFVLARAAGPYEGPLKQAVHRLKYFGQKSLAPVLAELMLQAIQ 114
>gi|266620741|ref|ZP_06113676.1| putative competence protein [Clostridium hathewayi DSM 13479]
gi|288867642|gb|EFC99940.1| putative competence protein [Clostridium hathewayi DSM 13479]
Length = 244
Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Query: 15 LFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQ 71
L ++P CP+ I+ R L C C K+ F+ K + L +
Sbjct: 14 LTDLLFPRRCPVCGDIVLPRGELICPACVKKLSFVKQPVCKKCGKEISSAEREYCLDCTK 73
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
R++ Y D + + +KY +R +
Sbjct: 74 HKRSFDYGRALLNYNDTAKKSMADIKYRNRRE 105
>gi|114332104|ref|YP_748326.1| hypothetical protein Neut_2139 [Nitrosomonas eutropha C91]
gi|114309118|gb|ABI60361.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
Length = 236
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + ++ +C C + ++ + ++K +R+
Sbjct: 24 CVLCQ--VSDHRDICAACLHDLPRLSQVHCPSCLLPVPSSQICGACLRKPPAWNHVRAAV 81
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMA 109
Y L++ LKY LA ++A
Sbjct: 82 RYTYPVDALIQALKYRSELSLAPILA 107
>gi|46445939|ref|YP_007304.1| putative competence-related protein comF [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399580|emb|CAF23029.1| putative competence-related protein comF [Candidatus Protochlamydia
amoebophila UWE25]
Length = 241
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Query: 13 IELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFI---TATEHILKNNKDNIDKDPLK 68
H ++P+ C + + C C S + I + +
Sbjct: 9 KSWIHFVFPATCLYCKESLQPSQAVFCYACASLLELINPQERCPICFDLKNNTFVHKCER 68
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ S Y + LV+ LKY ++ LA MA
Sbjct: 69 CKAFPSLFLRQASAFDYFGPAQTLVKQLKYGNQPHLAKGMA 109
>gi|229586890|ref|YP_002845391.1| Competence protein F [Rickettsia africae ESF-5]
gi|228021940|gb|ACP53648.1| Competence protein F [Rickettsia africae ESF-5]
Length = 115
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 27/88 (30%), Gaps = 5/88 (5%)
Query: 27 YSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSMQKDLPLTQIRSV 82
C CW K+ FI + + +I + RS+
Sbjct: 5 CGN-TRGSGEFCSDCWKKLEFIARPYCSICGQRFSIKILDNCICGNCYSNKPNYEFARSL 63
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ S +V KY D+T A A+
Sbjct: 64 FKCNEHSKKIVHQFKYQDKTIFAKTFAK 91
>gi|58616813|ref|YP_196012.1| putative competence protein F (DNA transformation protein comF)
[Ehrlichia ruminantium str. Gardel]
gi|58416425|emb|CAI27538.1| Similar to competence protein F (DNA transformation protein comF)
[Ehrlichia ruminantium str. Gardel]
Length = 230
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKS 69
+ ++ I+P C II LC C + I F+ I K + K
Sbjct: 1 MFSKIISHIFPKTCAGCECIIPECCDLCSTCSNNIDFLYGNYCISCGFKLSEGISICGKC 60
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ T++ S+ Y S ++ K+ D T A+WM
Sbjct: 61 IANKPMFTKLESIFSYDKYSKNIILNFKFFDNTLHIKTYAKWM 103
>gi|167644905|ref|YP_001682568.1| phosphoribosyltransferase [Caulobacter sp. K31]
gi|167347335|gb|ABZ70070.1| phosphoribosyltransferase [Caulobacter sp. K31]
Length = 215
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 39 GHCWSKIHFITATEHILKNNKDNIDKD---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95
WS+I F+ D + + + R+ LY + S L+
Sbjct: 3 AAAWSRITFVDGPVCDGCGAPFAYDAGEIRCVLCQTRPRAFARARAACLYDEHSRDLILK 62
Query: 96 LKYHDRTDLAIMMAQWMFRVLEKI 119
LK+ DRTDL+ + A+W+ R +
Sbjct: 63 LKHADRTDLSGLFARWLSRSAADL 86
>gi|331090560|ref|ZP_08339412.1| hypothetical protein HMPREF9477_00055 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330403124|gb|EGG82686.1| hypothetical protein HMPREF9477_00055 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 231
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 4/93 (4%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLK 68
+I + +YP +C +I +C C K+ I +++
Sbjct: 1 MIKRILEWLYPPVCVFCGKICEQ--GICAECRKKVGIIGEPRCKKCGKPIRLEEAELCYD 58
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101
+++L Q RS+ L+ + KY +R
Sbjct: 59 CEREELDYEQGRSLWLHKMPVSSSIYAFKYKNR 91
>gi|149197780|ref|ZP_01874829.1| predicted amidophosphoribosyltransferase [Lentisphaera araneosa
HTCC2155]
gi|149139001|gb|EDM27405.1| predicted amidophosphoribosyltransferase [Lentisphaera araneosa
HTCC2155]
Length = 227
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFI--TATEHILKNNKDNIDKDPLKSMQK 72
+ + IYP +C LC C K+ +I T D + ++
Sbjct: 1 MLNYIYPDVCVCCEAPTPPESPLCETCTKKLSYIDHENTCSSCHGLNDTATRLCSNCLKT 60
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
+ S + ++ L+ KY L
Sbjct: 61 PPKWSHSTSAFAFEGLARELILRFKYSRHLYL 92
>gi|332798810|ref|YP_004460309.1| phosphoribosyltransferase [Tepidanaerobacter sp. Re1]
gi|332696545|gb|AEE91002.1| phosphoribosyltransferase [Tepidanaerobacter sp. Re1]
Length = 238
Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 15 LFHCIYP--SICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKSM 70
++P C + ++ N +C +C SKI +T +
Sbjct: 11 FLDILFPQKPYCLLCGNKLANTESIICENCKSKIEPLTGSLCGKCGKPLKTGLLFCNDCQ 70
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ Q RS Y L+ KY+ R +LA ++ Q MF +L+++
Sbjct: 71 NEHHAFVQARSYGRYEGTLKQLIYEFKYNGRQELAEILGQMMFSLLKEL 119
>gi|34581516|ref|ZP_00142996.1| hypothetical competence protein F [Rickettsia sibirica 246]
gi|28262901|gb|EAA26405.1| hypothetical competence protein F [Rickettsia sibirica 246]
Length = 111
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Query: 27 YSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSMQKDLPLTQIRSV 82
C CW K+ FI + + +I + RS+
Sbjct: 5 CGN-TRGSGEFCSDCWKKLEFIARPYCSICGQRFSIKILDNCICGNCYSNKPNYEFARSL 63
Query: 83 TLYCDMSCVLVRLLKYHDRTDLA 105
+ S +V KY D+T A
Sbjct: 64 FKCNEHSKKIVHQFKYQDKTIFA 86
>gi|57238824|ref|YP_179960.1| putative competence protein F (DNA transformation protein comF)
[Ehrlichia ruminantium str. Welgevonden]
gi|58578754|ref|YP_196966.1| putative competence protein F (DNA transformation protein comF)
[Ehrlichia ruminantium str. Welgevonden]
gi|57160903|emb|CAH57808.1| putative competence protein F [Ehrlichia ruminantium str.
Welgevonden]
gi|58417380|emb|CAI26584.1| Similar to competence protein F (DNA transformation protein comF)
[Ehrlichia ruminantium str. Welgevonden]
Length = 230
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKS 69
+ ++ + I+P C II LC C + I F+ I K + K
Sbjct: 1 MFSKIINHIFPKTCAGCECIIPECCDLCSICSNNIDFLHGNYCISCGFKLSEGISICGKC 60
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ T++ S+ Y S ++ K+ D T A+WM
Sbjct: 61 IANKPMFTKLESIFSYDKYSKNIILNFKFFDNTLHIKTYAKWM 103
>gi|51244132|ref|YP_064016.1| competence protein F [Desulfotalea psychrophila LSv54]
gi|50875169|emb|CAG35009.1| related to competence protein F [Desulfotalea psychrophila LSv54]
Length = 238
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 10/98 (10%)
Query: 15 LFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----PL 67
L ++P C I +R LC C KI T L +
Sbjct: 4 LLDLLFPRSCVYCEERIPYGIRETLCPACLQKIK-PTRPPLCLCCGGPLVGPVETEHLCG 62
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
+ + RS+ +Y D+ L+ LK+ D+A
Sbjct: 63 TCLLHMPAYNRARSLFIYEDVVRGLIHGLKFG--QDMA 98
>gi|315651636|ref|ZP_07904647.1| competence protein F [Eubacterium saburreum DSM 3986]
gi|315486090|gb|EFU76461.1| competence protein F [Eubacterium saburreum DSM 3986]
Length = 247
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKD-- 65
K+I ++ ++P CP+ I+ + L C C + F+ + I + D
Sbjct: 12 KAIGDKIIDAVFPRRCPVCGEIVREKGHLICKSCIGGLPFVKSPYCIRCGKEIISSDDAY 71
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
+ + R++ Y D ++ +KY ++ +
Sbjct: 72 CDDC-KCEREFVSGRALCNYTDNMAHIILKIKYGNKRE 108
>gi|187735075|ref|YP_001877187.1| competence protein F, [Akkermansia muciniphila ATCC BAA-835]
gi|187425127|gb|ACD04406.1| competence protein F, putative [Akkermansia muciniphila ATCC
BAA-835]
Length = 249
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 6/116 (5%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNK----DNI 62
++S++ E +YP +C + R L C +C C + +
Sbjct: 2 LRSVVREWLSWVYPFVCELCGRG-GLDGCHVCPDCRGSFVPVEPPFCAVCGEPAEGSFIP 60
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ + R+V + L+ KY LA AQ M +
Sbjct: 61 SGLCRRCAVALPSFEEARAVYVNTGSLRDLLLAFKYGGAVHLAGSFAQMMAEAVRG 116
>gi|225376976|ref|ZP_03754197.1| hypothetical protein ROSEINA2194_02618 [Roseburia inulinivorans DSM
16841]
gi|225211297|gb|EEG93651.1| hypothetical protein ROSEINA2194_02618 [Roseburia inulinivorans DSM
16841]
Length = 247
Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQK 72
L + ++P CP+ +I + C C K+ I K +D + M+K
Sbjct: 18 LSNIVFPPRCPVCDEVIYVGKDTCEDCRKKVICIGEPSCKKCGKPLEDQRREYCTDCMRK 77
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ--------WMFR 114
+Q ++V +Y + KY ++ + A A+ W+ R
Sbjct: 78 KHYFSQGKAVFVYQGEIRQSMYRFKYSNKREYADFYAKEAVRIYGDWIRR 127
>gi|20806995|ref|NP_622166.1| amidophosphoribosyltransferase [Thermoanaerobacter tengcongensis
MB4]
gi|254478842|ref|ZP_05092207.1| Phosphoribosyl transferase domain protein [Carboxydibrachium
pacificum DSM 12653]
gi|20515478|gb|AAM23770.1| predicted amidophosphoribosyltransferases [Thermoanaerobacter
tengcongensis MB4]
gi|214035204|gb|EEB75913.1| Phosphoribosyl transferase domain protein [Carboxydibrachium
pacificum DSM 12653]
Length = 228
Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 34/108 (31%), Gaps = 3/108 (2%)
Query: 14 ELFHCIYPS--ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
++P C + + I LC C + + I + + ++
Sbjct: 2 TFLDLLFPPKTSCIVCNASI-KSGYLCDRCKASLEIINGKRCRICGKPLKEGEICSDCLK 60
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Q S Y + L+ KY + LA A +M ++ +
Sbjct: 61 TPHYFKQNVSPFEYEGVVKELIGKFKYFNERHLASFFADYMADAVKNM 108
>gi|320352701|ref|YP_004194040.1| phosphoribosyltransferase [Desulfobulbus propionicus DSM 2032]
gi|320121203|gb|ADW16749.1| phosphoribosyltransferase [Desulfobulbus propionicus DSM 2032]
Length = 239
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 4/93 (4%)
Query: 10 SIIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
S L ++P C R + + LCG C + I++ D
Sbjct: 3 SYFKALQDLLFPPACLGCERRLDSSQPPLLCGDCLGALAEISSPVCPGCGLPFANGADHL 62
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ R++ +Y L+ LK+
Sbjct: 63 CGDCLTGCYAFDLARALFVYQPPVSALILGLKF 95
>gi|270308613|ref|YP_003330671.1| ComF [Dehalococcoides sp. VS]
gi|270154505|gb|ACZ62343.1| ComF [Dehalococcoides sp. VS]
Length = 233
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+S+ L ++P C + + L C C + +IT L + D
Sbjct: 6 QSLKDTLLDLVFPQQCLVCGK----EGKLFCAKCGGSLSYITPPVCTLCGHHTGDDGVCP 61
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ M + L +RSV + + LKYH+ +A ++ ++
Sbjct: 62 QCMSGKIHLDGLRSVFNFEGGIAQAIYALKYHNLRSVAPLLGTFLA 107
>gi|254973792|ref|ZP_05270264.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile QCD-66c26]
gi|255091181|ref|ZP_05320659.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile CIP 107932]
gi|255099293|ref|ZP_05328270.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile QCD-63q42]
gi|255305079|ref|ZP_05349251.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile ATCC 43255]
gi|255312836|ref|ZP_05354419.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile QCD-76w55]
gi|255515595|ref|ZP_05383271.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile QCD-97b34]
gi|255648689|ref|ZP_05395591.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile QCD-37x79]
gi|260681911|ref|YP_003213196.1| putative phosphoribosyl transferase [Clostridium difficile CD196]
gi|260685509|ref|YP_003216642.1| putative phosphoribosyl transferase [Clostridium difficile R20291]
gi|306518810|ref|ZP_07405157.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile QCD-32g58]
gi|260208074|emb|CBA60305.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile CD196]
gi|260211525|emb|CBE01691.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile R20291]
Length = 260
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 5 IQTVKSIIIELFHCIYPS--ICPIYSRIINLRFC--LCGHCWSKIHFIT------ATEHI 54
I+ K++I + IYP C I + I +C C+ +++FI I
Sbjct: 9 IKNFKNMINKCLDFIYPENISCIICDKSIKKTNTYSICKSCFKEMNFIQDGCMKCGKPII 68
Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ + ++ KD + S Y D++ +V LKY+ +T +A +AQ M
Sbjct: 69 RHSIEKEFIEECSYCFNKDFYFDKSISCIEYNDVTKKMVLGLKYNQKTFMAKYIAQIM 126
>gi|323698874|ref|ZP_08110786.1| phosphoribosyltransferase [Desulfovibrio sp. ND132]
gi|323458806|gb|EGB14671.1| phosphoribosyltransferase [Desulfovibrio desulfuricans ND132]
Length = 246
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 5/86 (5%)
Query: 23 ICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPLT 77
CP+ S + + LC C ++ T ++D + P
Sbjct: 18 RCPVCASVMADGSRTLCPACAGELPLRTGGLCPACGGMSGREEDPPTLCPECRLDPPPWD 77
Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTD 103
++ Y + L+ K+ DR D
Sbjct: 78 RLYFHGRYTGLLRELILGYKFRDRFD 103
>gi|239623234|ref|ZP_04666265.1| amidophosphoribosyltransferase [Clostridiales bacterium 1_7_47_FAA]
gi|239522200|gb|EEQ62066.1| amidophosphoribosyltransferase [Clostridiales bacterium 1_7_47FAA]
Length = 241
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNID--KDPL 67
I L ++P CP+ +RI+ R L C C K+ ++ + D +
Sbjct: 7 ITSHLLDLLFPRRCPVCARIVMPRGNLICPECMKKLSWVHRPTCKKCGKEVLSDTIEYCY 66
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ S+ Y D++ + +KY+++ + ++ MFR
Sbjct: 67 DCTKHRRSFDYGLSLVNYDDIASKSMAQIKYNNKREYLDFYSEAMFR 113
>gi|108804459|ref|YP_644396.1| phosphoribosyltransferase [Rubrobacter xylanophilus DSM 9941]
gi|108765702|gb|ABG04584.1| phosphoribosyltransferase [Rubrobacter xylanophilus DSM 9941]
Length = 227
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 31/111 (27%), Gaps = 4/111 (3%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHI-LKNNKDNIDKDPLK 68
+ L +P C + LCG C + +
Sbjct: 4 PYLAALLDLFFPQRCAGCRSRASD--VLCGGCAENLPLLEPPLCARCGMPAPFEVPACSG 61
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA-IMMAQWMFRVLEK 118
DL R+ Y + V LKY +A + A + RVL +
Sbjct: 62 CRGVDLWFEGFRAPLRYEGVGREAVHALKYGGHARVAERLAAPLLARVLPE 112
>gi|288940276|ref|YP_003442516.1| phosphoribosyltransferase [Allochromatium vinosum DSM 180]
gi|288895648|gb|ADC61484.1| phosphoribosyltransferase [Allochromatium vinosum DSM 180]
Length = 238
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 31/112 (27%), Gaps = 9/112 (8%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT------EHILKNNKDNIDKDP 66
L ++P C + LC C + + ++ I
Sbjct: 10 RSLLDSLFPPTCLLCGAPGEQGRDLCAGCALDLPYNLRACARCARPFLVPLPDGAI---C 66
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
++ P + Y L+ K+ R + A ++ Q + +
Sbjct: 67 GDCERRPPPFDACLTAFRYEGAVPFLITGAKFRGRLNAARLLGQCLAEQARE 118
>gi|73749136|ref|YP_308375.1| putative comF family protein [Dehalococcoides sp. CBDB1]
gi|147669898|ref|YP_001214716.1| amidophosphoribosyltransferase-like protein [Dehalococcoides sp.
BAV1]
gi|289433110|ref|YP_003462983.1| phosphoribosyltransferase [Dehalococcoides sp. GT]
gi|73660852|emb|CAI83459.1| putative comF family protein [Dehalococcoides sp. CBDB1]
gi|146270846|gb|ABQ17838.1| amidophosphoribosyltransferase-like protein [Dehalococcoides sp.
BAV1]
gi|288946830|gb|ADC74527.1| phosphoribosyltransferase [Dehalococcoides sp. GT]
Length = 233
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+S L ++P C + + L C C + + +I+ L + + D
Sbjct: 6 QSFKDTLLDLVFPQQCLVCGK----EGKLFCAKCRAGLSYISPPVCSLCGHHISNDGVCP 61
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + L +RSV + + LKYH+ +A ++ +M
Sbjct: 62 MCLSGKIHLDGLRSVFNFEGGIAQAIYSLKYHNLRSVAPLLGTFMA 107
>gi|30250228|ref|NP_842298.1| hypothetical protein NE2301 [Nitrosomonas europaea ATCC 19718]
gi|30181023|emb|CAD86213.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
Length = 258
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 2/87 (2%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C + + + ++ + IR+
Sbjct: 24 CVLCQAPNHQD--ICNACLQDLPGLPPVHCPSCLLPMTSPEICGTCLRNPPAWSHIRAAL 81
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
Y + LV+ LKY LA ++A
Sbjct: 82 RYTFPADALVQALKYRSDLPLAPILAG 108
>gi|291540633|emb|CBL13744.1| Predicted amidophosphoribosyltransferases [Roseburia intestinalis
XB6B4]
Length = 248
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65
+ ++ ++ +YP C + I +C C K+H + K K +D+
Sbjct: 13 RKMLFQMLEILYPRRCAVCDEIEVTGKGICPLCKDKVH-VAGEPACKKCGKPLVDERKEF 71
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+K TQ ++V +Y + KY ++ + A A
Sbjct: 72 CTDCGKKHHVYTQGKAVFVYEGGIRNSMYRFKYGNKREYAEFYAN 116
>gi|240144754|ref|ZP_04743355.1| ComF family protein [Roseburia intestinalis L1-82]
gi|257203275|gb|EEV01560.1| ComF family protein [Roseburia intestinalis L1-82]
gi|291534616|emb|CBL07728.1| Predicted amidophosphoribosyltransferases [Roseburia intestinalis
M50/1]
Length = 248
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--- 65
+ ++ ++ +YP C + I +C C K+H + K K +D+
Sbjct: 13 RKMLFQMLEILYPRRCAVCDEIEVTGKGICPLCKDKVH-VAGEPACKKCGKPLVDERKEF 71
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+K TQ ++V +Y + KY ++ + A A
Sbjct: 72 CTDCGKKHHVYTQGKAVFVYEGGIRNSMYRFKYGNKREYAEFYAN 116
>gi|162455570|ref|YP_001617937.1| hypothetical protein sce7288 [Sorangium cellulosum 'So ce 56']
gi|161166152|emb|CAN97457.1| unnamed protein product [Sorangium cellulosum 'So ce 56']
Length = 246
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 30/116 (25%), Gaps = 12/116 (10%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A+ V+S++ + P C I C C T
Sbjct: 6 ALAAAVRSLVAAAARTLSPPACAGCDTPIADASVFCADC-------ARTSVPYAEGAPRG 58
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ L + + +R KY DR DLA + + M
Sbjct: 59 GAGTRAAAGAPLV-----AFAPFGGAVAEGIRRFKYGDRPDLARPLGRLMLCAARD 109
>gi|255654224|ref|ZP_05399633.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile QCD-23m63]
gi|296452508|ref|ZP_06894205.1| ComF family protein [Clostridium difficile NAP08]
gi|296881080|ref|ZP_06905023.1| ComF family protein [Clostridium difficile NAP07]
gi|296258613|gb|EFH05511.1| ComF family protein [Clostridium difficile NAP08]
gi|296427946|gb|EFH13850.1| ComF family protein [Clostridium difficile NAP07]
Length = 260
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 9 KSIIIELFHCIYPS--ICPIYSRIINLRFC--LCGHCWSKIHFIT------ATEHILKNN 58
K++I + IYP C I + I +C C+ +++FI I +
Sbjct: 13 KNMINKCLDFIYPENISCIICDKSIKKTNTYSICKSCFKEMNFIQDGCMKCGKPIIHHSI 72
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ ++ KD + S Y D++ +V LKY+ +T +A +AQ M
Sbjct: 73 EKEFIEECSYCFNKDFYFDKSISCIEYNDVTKKIVLGLKYNQKTFMAKYIAQIM 126
>gi|254281962|ref|ZP_04956930.1| ComF family protein [gamma proteobacterium NOR51-B]
gi|219678165|gb|EED34514.1| ComF family protein [gamma proteobacterium NOR51-B]
Length = 247
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 29/98 (29%), Gaps = 5/98 (5%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+P+ + ++ +I + P IC + + + +C C + I
Sbjct: 9 LPSTAKKLRQLIGQAL----PPICILCDQRHDEFTLVCQQCANGIQ-TNDNPCPGCAEPG 63
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ + + L+ LV K+
Sbjct: 64 VGAVHCGRCQTSPRSFDRATAPLLFEGPVRELVHRWKF 101
>gi|154484179|ref|ZP_02026627.1| hypothetical protein EUBVEN_01890 [Eubacterium ventriosum ATCC
27560]
gi|149734656|gb|EDM50573.1| hypothetical protein EUBVEN_01890 [Eubacterium ventriosum ATCC
27560]
Length = 235
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLK 68
++ + +YP++CP+ +++ +C C ++H I
Sbjct: 1 MLGRVIEWMYPTVCPVCQKVLGKGKIICDTCKDELHIINEPRCAKCGKPLTDSGKTYCND 60
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + RSV Y +++ KY + D A+
Sbjct: 61 CKKMKHYYDRARSVFEYTGEMKLVLYRFKYGNSRDYGKFFAK 102
>gi|189485653|ref|YP_001956594.1| competence protein F [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287612|dbj|BAG14133.1| competence protein F [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 238
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 5/115 (4%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
+K + + + +P C + ++ + +C C I +
Sbjct: 1 MKIFFLRIANFFHPVTCSVCGDDLSFLSQTKICDKCKESFPVIKNLLCQKCGMPLYDGGE 60
Query: 66 -PLKSMQKD--LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ ++RSV LY D L+ KY R+ LA +M+ ++
Sbjct: 61 YCCICKKHPKEYAFDKMRSVYLYKDSLRSLILKFKYSGRSFLARDFGLYMYEAMK 115
>gi|158521918|ref|YP_001529788.1| phosphoribosyltransferase [Desulfococcus oleovorans Hxd3]
gi|158510744|gb|ABW67711.1| phosphoribosyltransferase [Desulfococcus oleovorans Hxd3]
Length = 279
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 31/131 (23%), Gaps = 31/131 (23%)
Query: 10 SIIIELFHCIYPSICPIYSRII---------------------NLRFC------LCGHCW 42
+ + +YP C + F LC C
Sbjct: 8 AAFRSIVDAVYPPACCACGGPVCRETSGAVLSETPPPGFIDDTENPFSHVMGPVLCDVCV 67
Query: 43 SKIHFITATEHILKN----NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
IT + ++D D + R+V Y V KY
Sbjct: 68 KAFTPITPPFCPVCGNMFVSRDAEDHVCGACADFPRRFGRARAVGAYEASLMAAVHKFKY 127
Query: 99 HDRTDLAIMMA 109
RT LA +
Sbjct: 128 AGRTGLAGPLG 138
>gi|225420377|ref|ZP_03762680.1| hypothetical protein CLOSTASPAR_06722 [Clostridium asparagiforme
DSM 15981]
gi|225040996|gb|EEG51242.1| hypothetical protein CLOSTASPAR_06722 [Clostridium asparagiforme
DSM 15981]
Length = 240
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNID--K 64
+KS+ ++P CP+ RI+ R L C C +++ ++ + ++D +
Sbjct: 3 LKSLTDCAIDALFPRRCPVCGRIVVPRGRLICPGCINRLSWVKQPVCKSCGKELSVDTVE 62
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
++ R++ Y + + + +KY++R + A M R
Sbjct: 63 YCFDCARRPHSFVYGRALINYNEAASRSMAQIKYNNRREYLDYYAGEMVR 112
>gi|294055502|ref|YP_003549160.1| phosphoribosyltransferase [Coraliomargarita akajimensis DSM
45221]
gi|293614835|gb|ADE54990.1| phosphoribosyltransferase [Coraliomargarita akajimensis DSM
45221]
Length = 240
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 27/96 (28%), Gaps = 6/96 (6%)
Query: 10 SIIIELFHCIYPSICPIYSRIINL-RFC-LCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
I+ ++P C + F LCG C +I + +
Sbjct: 4 PILKASLDLLFPRSCVNCGDCVEGSDFEFLCGDCSREIFWAHPPACSVCGYPFFGMLAGA 63
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + +++ L L+ LKY
Sbjct: 64 RVCPHCAELTPQFDEGKTLFLAKGAGRTLLHELKYR 99
>gi|320161470|ref|YP_004174694.1| putative phosphoribosyltransferase [Anaerolinea thermophila UNI-1]
gi|319995323|dbj|BAJ64094.1| putative phosphoribosyltransferase [Anaerolinea thermophila UNI-1]
Length = 244
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 29/97 (29%), Gaps = 3/97 (3%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
++P C + C C KI + + ++
Sbjct: 13 TAVDWLFPPYCLDCGTLGERW---CETCQQKISLLAPPLCERCGRPVELAGLCVECQHAP 69
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + IRS Y + + LK+ LA ++A
Sbjct: 70 ISMDAIRSCYAYEGIIREAIHRLKFEKDLGLAEILAN 106
>gi|83859693|ref|ZP_00953213.1| phosphoribosyltransferase [Oceanicaulis alexandrii HTCC2633]
gi|83852052|gb|EAP89906.1| phosphoribosyltransferase [Oceanicaulis alexandrii HTCC2633]
Length = 185
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ Q + P R+ +Y + S LV +LK+ RTD + +WM R
Sbjct: 6 AGQDNPPCRISRAAFVYDEKSRRLVLMLKHAGRTDGVSVFGRWMMRAGAD 55
>gi|94264829|ref|ZP_01288605.1| competence protein F-like protein [delta proteobacterium MLMS-1]
gi|93454710|gb|EAT04971.1| competence protein F-like protein [delta proteobacterium MLMS-1]
Length = 251
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 14/108 (12%)
Query: 10 SIIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+ + +P C + + C C + I F A
Sbjct: 8 AWVRSCLDLFFPPHCLACRVALPSSQPPLFCAACRAAITFARAPLCSCCGRPLGSLPGLA 67
Query: 66 --------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
+QK ++ R+ LY +M ++ KYH DLA
Sbjct: 68 PAVGDSHCCGACLQKPPFFSKARAAVLYDEMIGRALQGYKYHG--DLA 113
>gi|82702257|ref|YP_411823.1| phosphoribosyltransferase [Nitrosospira multiformis ATCC 25196]
gi|82410322|gb|ABB74431.1| Phosphoribosyltransferase [Nitrosospira multiformis ATCC 25196]
Length = 239
Score = 54.2 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 2/95 (2%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
+ ++ C + LC C + I+ + + +
Sbjct: 16 IVQLLFGRNCFLCGSAATED--LCTPCRDSLPHISGPHCPVCALPMEEARVCGACLAHPP 73
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ Y L+ LKY LA ++A
Sbjct: 74 AFDLTLAAVNYAFPIDALLHSLKYRTNLALAPVLA 108
>gi|332982900|ref|YP_004464341.1| phosphoribosyltransferase [Mahella australiensis 50-1 BON]
gi|332700578|gb|AEE97519.1| phosphoribosyltransferase [Mahella australiensis 50-1 BON]
Length = 243
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 6/113 (5%)
Query: 9 KSIIIELFHCIYPS--ICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
+++I ++ IYP C ++ + + +C HCW + F + + DK
Sbjct: 4 RTLIEDVCDIIYPPANTCIFCNQQGELIVPYSMCEHCWDTLPFTKPPLCDICGKPIDSDK 63
Query: 65 D--PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + +V Y + KY ++LA + M V
Sbjct: 64 LRICHDCAEYSRSFVKAGAVLEYMPSVHETIYRYKYKGHSELAKPLGLLMAHV 116
>gi|300088792|ref|YP_003759314.1| phosphoribosyltransferase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528525|gb|ADJ26993.1| phosphoribosyltransferase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 230
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 6/100 (6%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
L + +P C R F C C + F +
Sbjct: 11 RLLNFFFPRYCLGCGRE-GAYF--CQSCRRDLPFQLPPFCPRCGKGLDHHPSCDD---IA 64
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
LT + SV + + V KY++ DLA + ++
Sbjct: 65 PELTALHSVFRFEGVIKKAVHQFKYNNLRDLAGPLGGYLA 104
>gi|146296670|ref|YP_001180441.1| phosphoribosyltransferase [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145410246|gb|ABP67250.1| phosphoribosyltransferase [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 232
Score = 54.2 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 5/90 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69
+ L +P C ++ + C C I FI D +
Sbjct: 1 MERLIQFFFPRRCSFCGKVGDDP---CDECKKFIRFIQGKTCEKCGIPIGDFVYSLCPSC 57
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++ ++ V Y + V L KY
Sbjct: 58 QRESFTFEKVLPVFYYEGIVRKGVHLFKYR 87
>gi|258517072|ref|YP_003193294.1| amidophosphoribosyltransferase [Desulfotomaculum acetoxidans DSM
771]
gi|257780777|gb|ACV64671.1| amidophosphoribosyltransferase [Desulfotomaculum acetoxidans DSM
771]
Length = 247
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 26/121 (21%)
Query: 8 VKSIIIELFHCI--YPSICPIYSRIINLRFCLCGHCWSKIHFITATEH------------ 53
++ +I L + +P +C + LC C + I +
Sbjct: 2 LRKLIEGLTDLLLPHPPVCVLCGVRRKQVASLCPLC---RNMIESYRCEPVCKLCGRYLL 58
Query: 54 ILKNNKDNIDKDPLKSMQK-DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+D + P RS Y + VR LKY++ A+WM
Sbjct: 59 PYPGAEDIFSDRCPECSSGGSWPFAAARSAGAYEGLLKEAVRQLKYYN--------ARWM 110
Query: 113 F 113
Sbjct: 111 V 111
>gi|329928719|ref|ZP_08282568.1| comF family protein [Paenibacillus sp. HGF5]
gi|328937500|gb|EGG33918.1| comF family protein [Paenibacillus sp. HGF5]
Length = 286
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 6/117 (5%)
Query: 4 IIQTVKSIIIELFHCIYP--SICPIYSRIINLRF---CLCGHCWSKIHFITATEHILKNN 58
I + ++ + + P IC +I + +C C+ +I +I +
Sbjct: 2 ISNVLSQLLGHMHRLLKPMDEICLTCGKIGSCNQELPGICHACYRQIPWIFKPRCLRCGR 61
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
D + D RS Y + KY A ++ + M R
Sbjct: 62 GIGC-PDCTRLGVNDRSFVSNRSAVTYDAQMREWLAQYKYRGNERYAPLLVEMMLRA 117
>gi|148266135|ref|YP_001232841.1| amidophosphoribosyltransferase-like protein [Geobacter
uraniireducens Rf4]
gi|146399635|gb|ABQ28268.1| amidophosphoribosyltransferase-like protein [Geobacter
uraniireducens Rf4]
Length = 238
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 6/105 (5%)
Query: 11 IIIELFHCIYPSICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKD----NIDK 64
L ++P +C I I LC C K+ + + ++ ID
Sbjct: 2 FFRALIDILFPPLCHICKTFIPDAGDIHLCAGCREKLIPLNSPLCLVCGVPFATENGIDH 61
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ R+ ++ LV KY + L +
Sbjct: 62 LCGPCLSHPPAYAAARAALVFSGPVQDLVHRFKYGHKVHLCRPLG 106
>gi|15892767|ref|NP_360481.1| putative competence protein F [Rickettsia conorii str. Malish 7]
gi|15619946|gb|AAL03382.1| competence protein F-like protein [Rickettsia conorii str. Malish
7]
Length = 115
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 5/88 (5%)
Query: 27 YSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSMQKDLPLTQIRSV 82
C CW K+ FI + + +I + RS+
Sbjct: 5 CGN-TRGSGEFCSGCWKKLEFIARPYCSICRQRFSIKILDNCICGNCYSNKPNYEFARSL 63
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ S +V KY D+T A + A+
Sbjct: 64 FKCNEHSKKIVHQFKYQDKTIFAKIFAK 91
>gi|153003135|ref|YP_001377460.1| phosphoribosyltransferase [Anaeromyxobacter sp. Fw109-5]
gi|152026708|gb|ABS24476.1| phosphoribosyltransferase [Anaeromyxobacter sp. Fw109-5]
Length = 245
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 26/98 (26%), Gaps = 3/98 (3%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQ 78
+YP C + C C + + + D
Sbjct: 28 VYPPRCAACREGVASE-PFCPTCAEAVDPL--PAGCARCGMPGPDPLCGACRADPPAFDA 84
Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
IR+ L+ + KY R LA + W+ R
Sbjct: 85 IRAGGLFGGPLADAIHAFKYGGRPALARPLGAWLARTA 122
>gi|297569953|ref|YP_003691297.1| phosphoribosyltransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296925868|gb|ADH86678.1| phosphoribosyltransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 255
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 28/98 (28%), Gaps = 6/98 (6%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDNIDKD 65
+++ ++PS C + C C + ++ +
Sbjct: 9 AQAVFAACQDILFPSSCLGCRAPLPASRLPLFCPPCRQQFQWLNSPLCPACGRPWPAGAG 68
Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+QK + R+ +Y D ++ KY
Sbjct: 69 EDHLCGPCLQKPPLFQRARAAVVYRDPVAAAIQACKYQ 106
>gi|57233732|ref|YP_182161.1| comF family protein, putative [Dehalococcoides ethenogenes 195]
gi|57224180|gb|AAW39237.1| comF family protein, putative [Dehalococcoides ethenogenes 195]
Length = 233
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+S+ L ++P C + + L C C + +IT L + D
Sbjct: 6 QSLKDTLLDLVFPQQCLVCGK----EGKLFCARCSGSLSYITPPVCSLCGHHTGDDGVCP 61
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + L +RSV + + LKYH+ +A ++ ++
Sbjct: 62 MCLSGKVHLDGLRSVFNFEGGIAQAIYALKYHNLRSVAPLLGDFLA 107
>gi|160941942|ref|ZP_02089267.1| hypothetical protein CLOBOL_06836 [Clostridium bolteae ATCC
BAA-613]
gi|158435149|gb|EDP12916.1| hypothetical protein CLOBOL_06836 [Clostridium bolteae ATCC
BAA-613]
Length = 257
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 17 HCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQKD 73
++P CP+ I+ + L C C +K+ ++ + + + +
Sbjct: 29 DILFPRRCPVCGGIVLPKGDLICPGCMTKLSWVRRPVCKKCGKEVLDETIEYCYDCTRHK 88
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
S+ Y D + + +KY++R + ++ M R + K
Sbjct: 89 RSFDYGLSLINYDDTASRSMARIKYNNRREYLDFYSEAMVRKMGK 133
>gi|71906257|ref|YP_283844.1| phosphoribosyltransferase [Dechloromonas aromatica RCB]
gi|71845878|gb|AAZ45374.1| Phosphoribosyltransferase [Dechloromonas aromatica RCB]
Length = 247
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 41/114 (35%), Gaps = 3/114 (2%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+K + +L + + P C + + LC C + + + L ++ +
Sbjct: 19 LKGLARKLGNALLPGSCLLCGAN-SRDELLCPECNADLPGLPPQLCPLCADQTTHGERCG 77
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR--VLEKI 119
++ + ++ Y ++ LKY + +A ++ + R ++
Sbjct: 78 ACLKDAPCFDRTIALFHYDFPLDRIIHALKYGHQLAVAPWCSRRLGRRIAANEL 131
>gi|282891900|ref|ZP_06300379.1| hypothetical protein pah_c200o055 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498160|gb|EFB40500.1| hypothetical protein pah_c200o055 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 252
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 6/112 (5%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKD- 65
+K + + IYP IC + L C C ++ I TE + D
Sbjct: 1 MKKWVGNGLNLIYPPICLECEDSLQNSSSLFCDDCHEQLSLIDPTERCHYCFESKHDFRS 60
Query: 66 ----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + + Y + LV+ LKY ++ LA ++
Sbjct: 61 GVSLCKRCSLHAPLFRGVGAAFDYEGPAATLVKHLKYLNKPYLAEGAGAFLA 112
>gi|225026860|ref|ZP_03716052.1| hypothetical protein EUBHAL_01114 [Eubacterium hallii DSM 3353]
gi|224955867|gb|EEG37076.1| hypothetical protein EUBHAL_01114 [Eubacterium hallii DSM 3353]
Length = 277
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 2/104 (1%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNID 63
Q + II +L ++P CP+ +++ + C ++ I + K +
Sbjct: 32 QAILWIIRQLLPFLFPRHCPLCDKLLPYGSFIHEECHRELPLIHSPVCMRCGKPVSSHTQ 91
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107
+ + S+ LY + ++ KY +R LA
Sbjct: 92 EYCYDCRAFPKSFQRGLSLFLYNKKTRPIMSAFKYQNRRGLADF 135
>gi|228473984|ref|ZP_04058725.1| phosphoribosyltransferases family protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228274498|gb|EEK13339.1| phosphoribosyltransferases family protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 233
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 13/107 (12%)
Query: 10 SIIIELFHCIYPSICPIYSRIINL--RFCLCGHC---WSKIHFITATEHILKNNKDNIDK 64
SI ++ ++P C ++II F LC +C + HF T + K K
Sbjct: 4 SIFKDIMAVLFPKYCLGCTQIIGDNLPF-LCVNCRHELRQTHFDTLPDSENPMIKKFWGK 62
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111
++ L + +S L+ LKYH+R + + + QW
Sbjct: 63 VSVEKAAALLYYEKG-------TVSQRLIHALKYHNREQVGLWLGQW 102
>gi|158321545|ref|YP_001514052.1| competence protein F, putative [Alkaliphilus oremlandii OhILAs]
gi|158141744|gb|ABW20056.1| competence protein F, putative [Alkaliphilus oremlandii OhILAs]
Length = 228
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 36/111 (32%), Gaps = 16/111 (14%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI--- 62
+ + + L IYP + LC KI FI+ I +
Sbjct: 5 KALGEYMEALLELIYPPVTME---------DLCTE---KIPFISDHSCIQCGRGLRMMED 52
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ M K+ + SV Y L+ KY RT + +M WM
Sbjct: 53 GPKCQECMGKEYHFHRAISVVKYEGEMKDLIYAFKYAHRTYVGRVMG-WMM 102
>gi|255534812|ref|YP_003095183.1| competence protein [Flavobacteriaceae bacterium 3519-10]
gi|255341008|gb|ACU07121.1| competence protein [Flavobacteriaceae bacterium 3519-10]
Length = 228
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
L I+P+ C +RII+ +CG C+ +IHF T H + + ++
Sbjct: 15 LTDLIFPNRCLECNRIISADELVCGLCFDQIHF---THHHFD-ENNLLKEECAVLFPVQY 70
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111
++ +S +V LKY R ++A W
Sbjct: 71 AFALMK--FEEDSLSRKIVHQLKYGQREKAGKIIAGW 105
>gi|292490891|ref|YP_003526330.1| competence protein F [Nitrosococcus halophilus Nc4]
gi|291579486|gb|ADE13943.1| competence protein F [Nitrosococcus halophilus Nc4]
Length = 237
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 1/106 (0%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+ + + +YP +C + LC C + + + + + +I
Sbjct: 2 TVNRASIWLETFWQRLYPPLCALCGAPGATGLDLCSRCRADLPPL-GSACLCCARPLSIP 60
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
Q+ P + S Y L+ LK+H + LA ++
Sbjct: 61 GICGACQQQAPPQDRTLSAFRYAPPLDHLILQLKFHGKLHLAQLLG 106
>gi|260429468|ref|ZP_05783445.1| competence protein F [Citreicella sp. SE45]
gi|260420091|gb|EEX13344.1| competence protein F [Citreicella sp. SE45]
Length = 162
Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
LY D LV +LK+ DR D+A A WM R +
Sbjct: 1 MLYRDNGRKLVLMLKHGDRHDIAGAAAVWMARKARAL 37
>gi|196230002|ref|ZP_03128865.1| competence protein F, putative [Chthoniobacter flavus Ellin428]
gi|196225599|gb|EDY20106.1| competence protein F, putative [Chthoniobacter flavus Ellin428]
Length = 243
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 29/110 (26%), Gaps = 4/110 (3%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLK 68
+YP C LC C ++ I A + + D +
Sbjct: 12 QAFLDALYPPHCANCLADTPSGIHLCTKCAAQAPKIKAPFCSQCSQPFDGAIDDVFVCFQ 71
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ L + + + KY L +A W+ LE
Sbjct: 72 CEGRKLHFDCAIAPYRSRGVVREFIHRFKYERHFYLRQPLANWLAEALED 121
>gi|213616166|ref|ZP_03371992.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 84
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R LC C + + +QK P ++ SV
Sbjct: 10 ICSVCARAVRQRVSLCPQC--------------GLPAGHPSLPCGRCLQKPPPWQRLVSV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ Y +LV LK+ R+++A +A+
Sbjct: 56 SDYTPPLSLLVHQLKFTRRSEIAAALAR 83
>gi|225873655|ref|YP_002755114.1| ComF family protein [Acidobacterium capsulatum ATCC 51196]
gi|225792065|gb|ACO32155.1| ComF family protein [Acidobacterium capsulatum ATCC 51196]
Length = 310
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 11/114 (9%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNN----- 58
T + L + PS C + + R +C CW+ + L
Sbjct: 4 STAHDTVSNLSTVLLPSPCRLCGEPLQEMTRVPVCSSCWNHLPAQAGILCHLCGELLPHH 63
Query: 59 --KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD-LAIMMA 109
+N + + P Q + +Y L+ LLKY DR + +A +A
Sbjct: 64 FSAENSEPHCPACAEAAPPFVQAVAHGVYEGGLRELLHLLKY-DRMEPIAPRLA 116
>gi|284046049|ref|YP_003396389.1| competence protein F [Conexibacter woesei DSM 14684]
gi|283950270|gb|ADB53014.1| competence protein F [Conexibacter woesei DSM 14684]
Length = 239
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 7/110 (6%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNK 59
+P ++ + EL + P C + LC C +++ ++
Sbjct: 8 LPDLLLRAR---DELLAAVVPPACASCGHVLARAHQLLCDRCRAELPWLGPARCGCCGLP 64
Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+D + + Y + LV LK+ +A +MA
Sbjct: 65 RPCGPP---CPARDAAFSAAWAPLAYDGTARRLVAALKFGGALPVAQLMA 111
>gi|115372528|ref|ZP_01459836.1| phosphoribosyltransferase [Stigmatella aurantiaca DW4/3-1]
gi|115370490|gb|EAU69417.1| phosphoribosyltransferase [Stigmatella aurantiaca DW4/3-1]
Length = 251
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI-DK 64
Q + +YP C ++++ + C C + + +
Sbjct: 15 QAATRTLRGWAELLYPPSCLACAQVLPTQSPFCETCDTALERLPPACCRTCAEPGAFPAS 74
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
+ P +++ + ++ + KY D +
Sbjct: 75 TCPRCHLHPPPFSRVWAPFIHEGPVSRAIHRYKYEDHPE 113
>gi|167763742|ref|ZP_02435869.1| hypothetical protein BACSTE_02122 [Bacteroides stercoris ATCC
43183]
gi|167697858|gb|EDS14437.1| hypothetical protein BACSTE_02122 [Bacteroides stercoris ATCC
43183]
Length = 239
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 11/111 (9%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
T+K+ ++ H +P C + + +C C + T++ L +
Sbjct: 8 NTLKAWLLSFLHLFFPRQCVVCGTPLQEGEEAICLKCNMDLP---RTDYHLCADNPVERM 64
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
K PL + S Y S ++ LKY R DL M ++M
Sbjct: 65 FWGKI-----PLERATSYFFYHKGSDFRRILHQLKYGGRKDLGETMGRFMA 110
>gi|91776533|ref|YP_546289.1| hypothetical protein Mfla_2181 [Methylobacillus flagellatus KT]
gi|91710520|gb|ABE50448.1| conserved hypothetical protein [Methylobacillus flagellatus KT]
Length = 227
Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 27/95 (28%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
L ++P C + S LC C + + T + +Q
Sbjct: 4 LIERLFPQSCLLCSSWRAGSLGLCHDCLHDMPWHTDHACPQCALPSGNSMLCGQCLQAPP 63
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
RS+ Y ++ KY LA M
Sbjct: 64 AFDATRSLFQYRFPLSATLQQYKYGQLLPLARTMG 98
>gi|310826754|ref|YP_003959111.1| amidophosphoribosyltransferase [Eubacterium limosum KIST612]
gi|308738488|gb|ADO36148.1| amidophosphoribosyltransferase [Eubacterium limosum KIST612]
Length = 263
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Query: 15 LFHCIYPS--ICPIYSR-IINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKS 69
L ++ +CP+ + + LC C + +T K +
Sbjct: 31 LRETLFLPNGVCPVCGKVLFRTESYLCERCAQSLPRVTMPSCKYCGKPLPEKGLDFCGDC 90
Query: 70 MQKDLPLTQIRSVTL-YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
P+ +V L Y LV LK+ L + + M + +
Sbjct: 91 GPLKDPVLAGGAVWLHYSGSGQRLVHSLKFGHLPQLGSWIGRQMAEAVRE 140
>gi|317121040|ref|YP_004101043.1| phosphoribosyltransferase [Thermaerobacter marianensis DSM 12885]
gi|315591020|gb|ADU50316.1| phosphoribosyltransferase [Thermaerobacter marianensis DSM 12885]
Length = 315
Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 7/93 (7%)
Query: 20 YPSICPIYSRIINL----RFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK--- 72
+P C R + LC C +++ + + + + + Q
Sbjct: 51 WPPYCLGCGRYLPGWPPAAPALCEECAARLGHGPGSRCPVCDRPAWLARPGDACSQCRNL 110
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
P +RSV +Y + L+ +KY D LA
Sbjct: 111 GPPWVAVRSVGVYGGLLRRLILRMKYGDEPYLA 143
>gi|310819107|ref|YP_003951465.1| phosphoribosyltransferase [Stigmatella aurantiaca DW4/3-1]
gi|309392179|gb|ADO69638.1| Phosphoribosyltransferase [Stigmatella aurantiaca DW4/3-1]
Length = 289
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI-DK 64
Q + +YP C ++++ + C C + + +
Sbjct: 53 QAATRTLRGWAELLYPPSCLACAQVLPTQSPFCETCDTALERLPPACCRTCAEPGAFPAS 112
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
+ P +++ + ++ + KY D +
Sbjct: 113 TCPRCHLHPPPFSRVWAPFIHEGPVSRAIHRYKYEDHPE 151
>gi|288926892|ref|ZP_06420792.1| competence protein ComF [Prevotella buccae D17]
gi|288336331|gb|EFC74712.1| competence protein ComF [Prevotella buccae D17]
Length = 235
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 39/113 (34%), Gaps = 20/113 (17%)
Query: 10 SIIIELFHCIYPSICPIYS-RIINLRFCLCGHC---WSKIHFITATEHILKNNKDNIDKD 65
++ L+ ++P C I R+ LC C + FI + + K
Sbjct: 7 PMLRRLYDMLFPRACAICGQRLALGEQALCAVCNINLPRTRFIE------DPEDNAMAKT 60
Query: 66 PLKSMQKDLPLTQIRSVTLYCDM----SCVLVRLLKYHDRTDLAIMMAQWMFR 114
M + R+ LY + S L+ LKY + MM + M +
Sbjct: 61 ISSQMAVE------RATALYRHLSHSSSGALIYNLKYGGHPEYGDMMGELMAK 107
>gi|150388558|ref|YP_001318607.1| phosphoribosyltransferase [Alkaliphilus metalliredigens QYMF]
gi|149948420|gb|ABR46948.1| phosphoribosyltransferase [Alkaliphilus metalliredigens QYMF]
Length = 242
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 11/112 (9%)
Query: 8 VKSIIIELFHCIYP--SICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+K+ L +YP C ++ ++ LC C+ +I F EH +
Sbjct: 1 MKAYWGALMDLMYPLDVSCIACKENLSNQTKYYLCDTCYGEIDFF--PEHCCHQCGKILS 58
Query: 64 KD-----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
K + +V Y L+ KY L+ +M Q
Sbjct: 59 MTEAVGLCQACESKPPSFERAIAVFQYQGHIKRLIFRFKYEHEPYLSRIMGQ 110
>gi|300113674|ref|YP_003760249.1| competence protein F [Nitrosococcus watsonii C-113]
gi|299539611|gb|ADJ27928.1| competence protein F [Nitrosococcus watsonii C-113]
Length = 237
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 1/107 (0%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+ + + L+ +YP C + LC C + + I
Sbjct: 2 TVNRAATWLEILWRGLYPPRCALCGAPGTPEHDLCAPCRRDLPAL-GAACSRCARPLPIA 60
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
Q+ P S Y L+ LK+H + LA ++ Q
Sbjct: 61 GICGACQQQAPPQHYTFSPFRYAPPLDYLLLQLKFHGKLHLAPLLGQ 107
>gi|255327018|ref|ZP_05368094.1| phosphoribosyltransferase [Rothia mucilaginosa ATCC 25296]
gi|255296235|gb|EET75576.1| phosphoribosyltransferase [Rothia mucilaginosa ATCC 25296]
Length = 301
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 12/121 (9%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNN 58
+ + +KS L + P CP + + LC C ++ L
Sbjct: 19 LTGLAGALKSAGGSLGEVLMPRTCPCCAVPVTYGAGSPLCEACLPQLR------SALAKA 72
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ PL ++R+ + Y + LK RTDL ++ + + R + +
Sbjct: 73 ERVYALQPLDGAAAP----EVRAASRYEGSMPRALLALKNAGRTDLLPLLGEGLARSVYE 128
Query: 119 I 119
+
Sbjct: 129 L 129
>gi|119899106|ref|YP_934319.1| putative competence protein F [Azoarcus sp. BH72]
gi|119671519|emb|CAL95432.1| putative competence protein F [Azoarcus sp. BH72]
Length = 230
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 30/107 (28%), Gaps = 1/107 (0%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
++ + + P C + +C C +++ A +
Sbjct: 3 RLLDFVVDALIPQDCFLCGAPAAG-RAICTACEAELPGAPAQACPCCAVPVASGGRCGEC 61
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
+Q ++ + +V LKY R LA A R
Sbjct: 62 LQHPPAFDSTVALFAFAFPVDRMVHALKYRHRLGLADYFAAVALRRG 108
>gi|126697705|ref|YP_001086602.1| putative phosphoribosyl transferase (putative competence protein)
[Clostridium difficile 630]
gi|115249142|emb|CAJ66953.1| putative phosphoribosyl transferase [Clostridium difficile]
Length = 260
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 10/118 (8%)
Query: 5 IQTVKSIIIELFHCIYPS--ICPIYSRIINLRFC--LCGHCWSKIHFIT------ATEHI 54
I+ K++I + IYP C I + I + C+ +++FI I
Sbjct: 9 IKNFKNMINKCLDFIYPENISCIICDKSIKKTNTYSIFKSCFKEMNFIQDGCMKCGKPII 68
Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ + ++ KD + S Y D++ +V LKY+ +T +A +AQ M
Sbjct: 69 RHSIEKEFIEECSYCFNKDFYFDKSISCIEYNDVTKKMVLGLKYNQKTFMAKYIAQIM 126
>gi|16762777|ref|NP_458394.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144264|ref|NP_807606.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56415425|ref|YP_152500.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197364355|ref|YP_002143992.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|213161412|ref|ZP_03347122.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213420970|ref|ZP_03354036.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
gi|213426879|ref|ZP_03359629.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213647817|ref|ZP_03377870.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|289824842|ref|ZP_06544285.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|51701439|sp|Q8Z222|GNTX_SALTI RecName: Full=Protein GntX
gi|25321978|pir||AD0997 probable competence protein STY4286 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505083|emb|CAD08104.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139901|gb|AAO71466.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56129682|gb|AAV79188.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095832|emb|CAR61405.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 227
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R LC C + + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAGHPSLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89
>gi|168235105|ref|ZP_02660163.1| protein GntX [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194736680|ref|YP_002116453.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194712182|gb|ACF91403.1| protein GntX [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291553|gb|EDY30905.1| protein GntX [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 227
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R LC C + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSLCPQC--------GLPAAYP------SLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89
>gi|302877488|ref|YP_003846052.1| phosphoribosyltransferase [Gallionella capsiferriformans ES-2]
gi|302580277|gb|ADL54288.1| phosphoribosyltransferase [Gallionella capsiferriformans ES-2]
Length = 237
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 4/110 (3%)
Query: 3 AIIQTVKSIIIELFHCIYPSI-CPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKD 60
+I+ T+K F I P+ C + + L C C ++ + A +
Sbjct: 2 SILNTLKLNSRLKFDQILPAQPCVLCGTM--SHAGLWCTACDYEMPYFDAPHCPVCARNT 59
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ +V Y L++ LKYH + LA M+A+
Sbjct: 60 PDGSLCGHCLTHPPAFHHTLAVFSYQFPIDQLIQSLKYHSQLPLAPMLAK 109
>gi|74316335|ref|YP_314075.1| hypothetical protein Tbd_0317 [Thiobacillus denitrificans ATCC
25259]
gi|74055830|gb|AAZ96270.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 230
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 29/106 (27%), Gaps = 1/106 (0%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
I + P C + LC C + + A + ++
Sbjct: 3 IRSFLDHLAPRTCLLCGD-TAGARTLCPGCRDSLPWHRAPQCPRCATPTPGGAVCGACLK 61
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ + Y ++ LKYH +A ++ + +
Sbjct: 62 HSPAFDRTIAALAYAFPLDRMIPRLKYHGALAVAPLLGECLTEACR 107
>gi|210608824|ref|ZP_03288020.1| hypothetical protein CLONEX_00199 [Clostridium nexile DSM 1787]
gi|210152890|gb|EEA83896.1| hypothetical protein CLONEX_00199 [Clostridium nexile DSM 1787]
Length = 234
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 4/104 (3%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSM 70
++ IYP C ++ + LC C K+ +IT K + +
Sbjct: 5 KKILGIIYPKTCCFCGKVSDKE--LCKDCAEKVVYITEPRCKKCGKPVRYAEQEYCYDCQ 62
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ Q RS+ ++ + + KY +R A+ M R
Sbjct: 63 KNVHAYDQGRSIWIHKMPVSMSIYQFKYKNRRIYGEFYAKEMIR 106
>gi|152977977|ref|YP_001343606.1| competence protein F [Actinobacillus succinogenes 130Z]
gi|150839700|gb|ABR73671.1| competence protein F [Actinobacillus succinogenes 130Z]
Length = 225
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 12/104 (11%)
Query: 23 ICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNI--DKDPLKSMQKDLPLTQI 79
C + R+ R LC C I + + + ++ + ++
Sbjct: 7 RCVLCGGRLALARHGLCSRC---NRLIERFPYCGSCGAPLAVNARHCGRCLRHEPGWDRL 63
Query: 80 RSVTLYCDMSCVLVRLLKYH-----DRTDLAIMMAQWMFRVLEK 118
+ Y + VL+ K+ DRT LA +M + R +
Sbjct: 64 VVIGRYAEPLSVLIHRFKFQHQFWLDRT-LARLMLLAIIRAKRE 106
>gi|323486258|ref|ZP_08091586.1| amidophosphoribosyltransferase [Clostridium symbiosum WAL-14163]
gi|323400476|gb|EGA92846.1| amidophosphoribosyltransferase [Clostridium symbiosum WAL-14163]
Length = 242
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 6/106 (5%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEH--ILKN 57
M + S+ ++P CP+ I+ L C C ++ F+ + K
Sbjct: 1 MKMEYKRAASL---FLDALFPRRCPVCGDIVMPPGKLICPGCQGRLSFVKSPVCKKCGKE 57
Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
+ + ++ Y + + + +KY +R +
Sbjct: 58 ILSEYQEYCFDCTRHRRSFEYGIALLNYNEAAGASMAAVKYKNRRE 103
>gi|326625251|gb|EGE31596.1| protein GntX [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 215
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R LC C + +QK P ++ SV
Sbjct: 10 ICSVCARAVRQRVSLCPQC--------GLPAAHP------SLPCGRCLQKPPPWQRLVSV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 56 SDYTPPLSLLVHQLKFTRRSEI 77
>gi|323693950|ref|ZP_08108136.1| amidophosphoribosyltransferase [Clostridium symbiosum WAL-14673]
gi|323501996|gb|EGB17872.1| amidophosphoribosyltransferase [Clostridium symbiosum WAL-14673]
Length = 242
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 6/106 (5%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEH--ILKN 57
M + S+ ++P CP+ I+ L C C ++ F+ + K
Sbjct: 1 MKMEYKRAASL---FLDALFPRRCPVCGDIVMPPGKLICPGCQGRLSFVKSPVCKKCGKE 57
Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
+ + ++ Y + + + +KY +R +
Sbjct: 58 ILSEYQEYCFDCTRHRRSFEYGIALLNYNEAAGASMAAVKYKNRRE 103
>gi|325662408|ref|ZP_08151017.1| hypothetical protein HMPREF0490_01756 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471410|gb|EGC74633.1| hypothetical protein HMPREF0490_01756 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 258
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 36/116 (31%), Gaps = 4/116 (3%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
+ K I + +YP+ C + + +C C ++ + ++
Sbjct: 22 RRAKLIWHRILELLYPTTCVFCGTVASE--GICESCRKEVKILQEPLCKKCGKPVRYEEQ 79
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ Q RS+ L+ + KY +R A A+ M +
Sbjct: 80 EYCYDCQKIIHFYEQGRSLWLHKMPVSQSIYQFKYRNRRVFAQYYAEQMAEQFADL 135
>gi|325981843|ref|YP_004294245.1| phosphoribosyltransferase [Nitrosomonas sp. AL212]
gi|325531362|gb|ADZ26083.1| phosphoribosyltransferase [Nitrosomonas sp. AL212]
Length = 228
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + N F C C + + + + + T+ +
Sbjct: 6 CVLCGASTNQDF--CESCMLDLPQLPENHCPICLWPVPTSEICGACLNTPPAFTRTIAAL 63
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
Y L+ KY LA +A
Sbjct: 64 RYTFPIDALIHAFKYRANLFLASTLAN 90
>gi|150026456|ref|YP_001297282.1| amidophosphoribosyltransferase [Flavobacterium psychrophilum
JIP02/86]
gi|149772997|emb|CAL44481.1| Putative amidophosphoribosyltransferase [Flavobacterium
psychrophilum JIP02/86]
Length = 227
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 11/107 (10%)
Query: 11 IIIELFHCIYPSICPIYSRIINL-RFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
++ L +P+IC S I+ +C C K+ F T D K
Sbjct: 1 MLKNLIKLFFPAICSGCSEILLQNEHTICILCRHKMPFTTDLLVD--------DNQSFKK 52
Query: 70 MQKDLPLTQIRSVTLY--CDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+P+ S+ Y + L+ LKY + ++ +++ +W
Sbjct: 53 FYGRIPIEHASSMLYYHKKGIVQQLIHNLKYKNHQEVGLILGEWYAH 99
>gi|160871688|ref|ZP_02061820.1| protein GntX [Rickettsiella grylli]
gi|159120487|gb|EDP45825.1| protein GntX [Rickettsiella grylli]
Length = 243
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQK 72
+ H ++ C I S + + LC C + ++ + N + ++
Sbjct: 14 ILHNLFSHHCIICSEKTHRKIDLCKACEKDLPWLKRVCYSCANPLPYLTTQSICGACLKN 73
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
LP ++ Y D+ + LK+ R D A ++
Sbjct: 74 PLPFYKLCIFFSYTDIIKRFIIGLKFQQRLDYAKILG 110
>gi|238916194|ref|YP_002929711.1| competence protein ComFC [Eubacterium eligens ATCC 27750]
gi|238871554|gb|ACR71264.1| competence protein ComFC [Eubacterium eligens ATCC 27750]
Length = 243
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFC----LCGHCWSKIHFITATEH--ILKNNKDNI 62
K +++E + + P CP+ + +C C K+ +++ K +++
Sbjct: 4 KKVLMEAVNAVLPPACPMCGKPAPFAGGSRVDICPDCMRKVSYVSEPVCLKCGKPVENDE 63
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
+ +K+ Q +V Y + KYH++ + A
Sbjct: 64 VEYCSDCSRKEHVYDQACAVYEYSKCIKDSIYRFKYHNKREYA 106
>gi|16766798|ref|NP_462413.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167549283|ref|ZP_02343042.1| protein GntX [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|167990715|ref|ZP_02571814.1| protein GntX [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168241652|ref|ZP_02666584.1| protein GntX [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194449324|ref|YP_002047535.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|200388063|ref|ZP_03214675.1| protein GntX [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|51701442|sp|Q8ZLI8|GNTX_SALTY RecName: Full=Protein GntX
gi|16422069|gb|AAL22372.1| putative amidophosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|194407628|gb|ACF67847.1| protein GntX [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|199605161|gb|EDZ03706.1| protein GntX [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205325670|gb|EDZ13509.1| protein GntX [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205330741|gb|EDZ17505.1| protein GntX [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205339021|gb|EDZ25785.1| protein GntX [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261248665|emb|CBG26503.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995732|gb|ACY90617.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160053|emb|CBW19572.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914534|dbj|BAJ38508.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226561|gb|EFX51611.1| protein GntX [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323131870|gb|ADX19300.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332990362|gb|AEF09345.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 227
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R LC C + + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAAHPSLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89
>gi|255282071|ref|ZP_05346626.1| competence protein F [Bryantella formatexigens DSM 14469]
gi|255267390|gb|EET60595.1| competence protein F [Bryantella formatexigens DSM 14469]
Length = 301
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
Q + + + P CP+ ++ +C C ++ +I D +
Sbjct: 13 QAARDAGMAALDLVLPRRCPLCGKLSE---GICEKCREELPYIRGAVCFRCGRPLADDTE 69
Query: 66 --PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
L TQ R++ LY + +KY ++ +
Sbjct: 70 EYCPSCSSGRLAYTQGRALYLYRSPLKESLYAVKYQNKRE 109
>gi|168465219|ref|ZP_02699111.1| protein GntX [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195632168|gb|EDX50652.1| protein GntX [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
Length = 227
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R +C C + + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSVCPQC--------------GLPAGHPSLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 68 SNYTPPLSLLVHQLKFTRRSEI 89
>gi|253998274|ref|YP_003050337.1| hypothetical protein Msip34_0562 [Methylovorus sp. SIP3-4]
gi|253984953|gb|ACT49810.1| conserved hypothetical protein [Methylovorus sp. SIP3-4]
Length = 227
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/83 (12%), Positives = 22/83 (26%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + LC C + + A + + ++
Sbjct: 13 CLLCTAADGGDLGLCASCQQDLPWHKAPCCPQCALPSSQGLLCGHCLTSPPAFDHTHALL 72
Query: 84 LYCDMSCVLVRLLKYHDRTDLAI 106
Y +++ KY D +A
Sbjct: 73 RYDFPLDAMLQGYKYRDMLHMAR 95
>gi|168260763|ref|ZP_02682736.1| protein GntX [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168818675|ref|ZP_02830675.1| protein GntX [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|197251427|ref|YP_002148434.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|204928749|ref|ZP_03219948.1| protein GntX [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|238910485|ref|ZP_04654322.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|197215130|gb|ACH52527.1| protein GntX [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|204322182|gb|EDZ07380.1| protein GntX [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205344315|gb|EDZ31079.1| protein GntX [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205350305|gb|EDZ36936.1| protein GntX [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|320087926|emb|CBY97688.1| Protein gntX [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|322614116|gb|EFY11052.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618008|gb|EFY14901.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625378|gb|EFY22204.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629843|gb|EFY26616.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632268|gb|EFY29019.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636381|gb|EFY33088.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643237|gb|EFY39806.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644761|gb|EFY41297.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322651214|gb|EFY47598.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654918|gb|EFY51233.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659175|gb|EFY55427.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663124|gb|EFY59328.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668610|gb|EFY64763.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674586|gb|EFY70679.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678208|gb|EFY74269.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682535|gb|EFY78556.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684248|gb|EFY80254.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192197|gb|EFZ77429.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196377|gb|EFZ81529.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201822|gb|EFZ86885.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206364|gb|EFZ91325.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211957|gb|EFZ96784.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216863|gb|EGA01586.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222262|gb|EGA06645.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224277|gb|EGA08566.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228205|gb|EGA12336.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233528|gb|EGA17621.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237010|gb|EGA21077.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243775|gb|EGA27791.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323245983|gb|EGA29970.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250759|gb|EGA34637.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323255770|gb|EGA39520.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261372|gb|EGA44958.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267655|gb|EGA51137.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268535|gb|EGA52002.1| DNA utilization protein GntX [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 227
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R LC C + + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAAHPSLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89
>gi|95931035|ref|ZP_01313763.1| phosphoribosyltransferase [Desulfuromonas acetoxidans DSM 684]
gi|95132931|gb|EAT14602.1| phosphoribosyltransferase [Desulfuromonas acetoxidans DSM 684]
Length = 247
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 40/113 (35%), Gaps = 11/113 (9%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSR--IINLRFCLCGHCWSKIHFITAT--EHILKNNKD 60
I + ++ + + ++P+ C + N F LC C + +
Sbjct: 7 IHPLVKLLKAVDNSLFPAACHACQKRLNTNEPF-LCHDC--QTSCLQQPTAHCPRCGQPH 63
Query: 61 ----NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ + + P +++ +Y L++ K+H +T LA +A
Sbjct: 64 PATTTQNHLCNRCLTSPPPFNWLKAAGIYQGQLAELLQQFKFHHKTSLASPLA 116
>gi|198244770|ref|YP_002217470.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|197939286|gb|ACH76619.1| protein GntX [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
Length = 227
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R LC C + + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAAHPSLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 68 SDYTPPLSLLVHQLKFTRRSEI 89
>gi|322421671|ref|YP_004200894.1| phosphoribosyltransferase [Geobacter sp. M18]
gi|320128058|gb|ADW15618.1| phosphoribosyltransferase [Geobacter sp. M18]
Length = 245
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 26/98 (26%), Gaps = 13/98 (13%)
Query: 24 CPIYSRIINLRFC--------LCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQ 71
C + + +C C +I F+ + + D +
Sbjct: 15 CHACRASLPVTGANDGSPRPLICAECLGRISFLVSPLCTVCGAPFATDSGSDHICGACLS 74
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
P RS + L+ KY + LA +
Sbjct: 75 HT-PFHTCRSAAILGGPVQDLIHRFKYGGKIHLAEPLG 111
>gi|218131422|ref|ZP_03460226.1| hypothetical protein BACEGG_03040 [Bacteroides eggerthii DSM 20697]
gi|317476433|ref|ZP_07935682.1| comF family protein [Bacteroides eggerthii 1_2_48FAA]
gi|217986354|gb|EEC52691.1| hypothetical protein BACEGG_03040 [Bacteroides eggerthii DSM 20697]
gi|316907459|gb|EFV29164.1| comF family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 234
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 35/111 (31%), Gaps = 11/111 (9%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
T K+ + H +P C + + +C C +D
Sbjct: 3 NTFKTWFLSFLHLFFPRQCAVCGEPLQEGEDAICLKC--------NMSLPRTGYHLRVDN 54
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+ PL S Y S ++ LLKY R DL +M ++M
Sbjct: 55 PVERMFWGKFPLEHATSYFFYQKGSDFRRILHLLKYGGRKDLGEIMGRFMA 105
>gi|197265899|ref|ZP_03165973.1| protein GntX [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197244154|gb|EDY26774.1| protein GntX [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
Length = 227
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R LC C + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSLCPQC--------GLPAAHP------SLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 68 SNYTPPLSLLVHQLKFTRRSEI 89
>gi|300776281|ref|ZP_07086139.1| possible competence protein [Chryseobacterium gleum ATCC 35910]
gi|300501791|gb|EFK32931.1| possible competence protein [Chryseobacterium gleum ATCC 35910]
Length = 217
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 8/98 (8%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK-DPLKSMQKD 73
+ ++P+ C +RII +C C+S+IHF K+ P+++
Sbjct: 2 ILDLLFPNRCLHCNRIIVSEILVCDLCFSQIHFTHYNYFENNPIKEKCSLFFPVENAFGL 61
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111
+ + +S ++ LKY R ++A W
Sbjct: 62 IRFEE-------EGLSRKIIHELKYRSREKTGKILANW 92
>gi|297537770|ref|YP_003673539.1| phosphoribosyltransferase [Methylotenera sp. 301]
gi|297257117|gb|ADI28962.1| phosphoribosyltransferase [Methylotenera sp. 301]
Length = 223
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 1/90 (1%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
LF ++ C + + R LC C+ + + A + N +
Sbjct: 2 LFDRLFKQRCLLCAANDGGRLGLCDACYKDLPWHNAPQCPQCGLSSN-GLVCGSCLNSPP 60
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
S+ Y +++ KY +L
Sbjct: 61 DFDATHSLLTYDFPLDAMMQRYKYGSMLNL 90
>gi|168232649|ref|ZP_02657707.1| protein GntX [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194469779|ref|ZP_03075763.1| protein GntX [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456143|gb|EDX44982.1| protein GntX [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205333040|gb|EDZ19804.1| protein GntX [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 227
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R LC C + + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSLCPQC--------------GLPAAHPSLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 68 SNYTPPLSLLVHQLKFTRRSEI 89
>gi|160878406|ref|YP_001557374.1| amidophosphoribosyltransferase [Clostridium phytofermentans ISDg]
gi|160427072|gb|ABX40635.1| amidophosphoribosyltransferase [Clostridium phytofermentans ISDg]
Length = 245
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 40/108 (37%), Gaps = 3/108 (2%)
Query: 9 KSIIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+ + E+ +YP CPI + I + +C C ++ + + ++
Sbjct: 3 RMVWREILDAVYPKRCPICNEILVPKDRKICSICSEELPVLMEPRCKKCSKPVLAEEQEY 62
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
++K T+ + LY + + KYH + + A +M
Sbjct: 63 CFDCVKKQHHYTRGFACFLYNEKLKKSLSEFKYHAKKEYAEFYVDYMV 110
>gi|78355831|ref|YP_387280.1| ComF family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218236|gb|ABB37585.1| ComF family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 251
Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 28/95 (29%), Gaps = 12/95 (12%)
Query: 24 CPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C R ++ C C H L++ + + P +R
Sbjct: 36 CNSCRRQLVQRTGGFCPRC--------GLPHALESMPLTL---CSSCISTPPPWLSLRFY 84
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
LY + ++ K+ L +M + + L
Sbjct: 85 GLYDGLLRRIIIRYKHTPDLTLHPLMGHMLCQALR 119
>gi|134096080|ref|YP_001101155.1| amidophosphoribosyltransferase [Herminiimonas arsenicoxydans]
gi|133739983|emb|CAL63034.1| Putative amidophosphoribosyltransferase [Herminiimonas
arsenicoxydans]
Length = 247
Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 12/112 (10%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK------NNKDNI 62
+ I L + PS C + + R LC C + F T + +
Sbjct: 10 RHFIRHLPTAL-PSSCALCG--FSSRQALCVDC--EQRFFHQTPPRCLQCASPLPHTGAL 64
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ + Y LV LK+ +R LA + A M R
Sbjct: 65 AQRCGACLGDPPAFDATIVAGDYAAPVDHLVLALKFGNRLALAPLFAS-MLR 115
>gi|254293167|ref|YP_003059190.1| phosphoribosyltransferase [Hirschia baltica ATCC 49814]
gi|254041698|gb|ACT58493.1| phosphoribosyltransferase [Hirschia baltica ATCC 49814]
Length = 232
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 11/102 (10%)
Query: 28 SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---------PLKSMQKDLPLTQ 78
I + W I F+ D + + +
Sbjct: 3 GDQIAGPGLIEVEYWLDIKFLNMPVCCRCGAPFEAMHDVGDAYELVECAACIARKPAFDR 62
Query: 79 IRSVTLYCDMSCVLVRLLKYH-DRTDLAIMMAQWMFRVLEKI 119
R+V +Y D++ ++ K DR L +M+QW V +
Sbjct: 63 ARAVFIYDDLTSRIILRFKNGADRNGL-KLMSQWCVDVAGDL 103
>gi|326336345|ref|ZP_08202516.1| amidophosphoribosyl-transferase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691519|gb|EGD33487.1| amidophosphoribosyl-transferase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 241
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 13/106 (12%)
Query: 10 SIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
SI ++ ++P C S+I+ LC C ++ H + D +
Sbjct: 13 SIYKDILSILFPKYCLGCSQIMGSQEDFLCSTCRHELR--ETLFHTQE------DNPMKE 64
Query: 69 SMQKDLPLTQIRSVTLYCDMS---CVLVRLLKYHDRTDLAIMMAQW 111
+P+ + + LY + L+ LKY + ++ + +W
Sbjct: 65 KFWGRIPVNKA-AALLYYEKGSITQRLIHALKYQGKENIGKWLGEW 109
>gi|301329724|ref|ZP_07222467.1| ComF family protein [Escherichia coli MS 78-1]
gi|312972323|ref|ZP_07786497.1| protein gntX [Escherichia coli 1827-70]
gi|300844196|gb|EFK71956.1| ComF family protein [Escherichia coli MS 78-1]
gi|310334700|gb|EFQ00905.1| protein gntX [Escherichia coli 1827-70]
gi|323164977|gb|EFZ50768.1| protein gntX [Shigella sonnei 53G]
gi|323970011|gb|EGB65286.1| comF family protein [Escherichia coli TA007]
Length = 215
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 56 ADYAPPLSLLIHQLKFSRRSEI 77
>gi|161505924|ref|YP_001573035.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867271|gb|ABX23894.1| hypothetical protein SARI_04105 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 243
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + + + LC C + +QK P ++ SV
Sbjct: 38 ICSVCAHAVRQSISLCPQC--------GLPAAHP------SLPCGRCLQKPPPWQRLVSV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R+++
Sbjct: 84 SDYKPPLSLLVHQLKFTRRSEI 105
>gi|331679477|ref|ZP_08380147.1| protein GntX [Escherichia coli H591]
gi|73857392|gb|AAZ90099.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|331072649|gb|EGI43974.1| protein GntX [Escherichia coli H591]
Length = 243
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 38 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 84 ADYAPPLSLLIHQLKFSRRSEI 105
>gi|331086209|ref|ZP_08335291.1| hypothetical protein HMPREF0987_01594 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406368|gb|EGG85882.1| hypothetical protein HMPREF0987_01594 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 258
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 4/109 (3%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65
K I + +YP+ C + + +C C ++ + ++
Sbjct: 23 RAKLIWHRILELLYPTTCVFCGTVASE--GICESCRKEVKILQEPLCKKCGKPVRYEEQE 80
Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Q RS+ L+ + KY +R A A+ M
Sbjct: 81 YCYDCQKIIHFYEQGRSLWLHKMPVSQSIYQFKYRNRRVFAQYYAEQMA 129
>gi|225573023|ref|ZP_03781778.1| hypothetical protein RUMHYD_01214 [Blautia hydrogenotrophica DSM
10507]
gi|225039620|gb|EEG49866.1| hypothetical protein RUMHYD_01214 [Blautia hydrogenotrophica DSM
10507]
Length = 239
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 7/112 (6%)
Query: 10 SIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--P 66
I + +YP CPI +I+ + +C C ++ I + +
Sbjct: 4 RIKESFLNALYPRCCPICHQILKEQNWLICPKCEGELKPIGEPRCKKCGKRIFYMEKEYC 63
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHD--RTDLAIMMAQWMFRVL 116
+++ + R + Y + LLKY D R + AQ M R
Sbjct: 64 QDCSRREHVFDEGRGIFDYDERMR--ASLLKYKDGGRREYGDFYAQAMIRYG 113
>gi|70732979|ref|YP_262752.1| competence protein ComF [Pseudomonas fluorescens Pf-5]
gi|68347278|gb|AAY94884.1| competence protein ComF [Pseudomonas fluorescens Pf-5]
Length = 246
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 31/88 (35%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + + LC C ++ ++ A + + +Q+ ++ +
Sbjct: 20 ACLLCDEPSDSALALCAPCLDELPWLGAQCSVCALPLPGPGLTCGQCLQEPPAFQRVIAP 79
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
Y L+ K+H++ +MA+
Sbjct: 80 WRYDFPVDSLISRFKHHEKWPFGRLMAE 107
>gi|194435591|ref|ZP_03067694.1| protein GntX [Escherichia coli 101-1]
gi|194425134|gb|EDX41118.1| protein GntX [Escherichia coli 101-1]
Length = 248
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 43 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 88
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 89 ADYAPPLSLLIHQLKFSRRSEI 110
>gi|89889786|ref|ZP_01201297.1| putative amidophosphoribosyl-transferase [Flavobacteria bacterium
BBFL7]
gi|89518059|gb|EAS20715.1| putative amidophosphoribosyl-transferase [Flavobacteria bacterium
BBFL7]
Length = 228
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 11/108 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+K I + F+ +YP +C + +C C T L N D+
Sbjct: 1 MKRWIYDFFNLLYPELCVGCETVLTTGESLICTSC--------RTHLPLTNFHKTSDEKM 52
Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ + + + S+ Y ++ LKY + +++ + W+
Sbjct: 53 RELFYARVDVQHVTSLFYYEKIGAVQQMIHQLKYRKKEEISSFIGSWL 100
>gi|262195009|ref|YP_003266218.1| competence protein F [Haliangium ochraceum DSM 14365]
gi|262078356|gb|ACY14325.1| competence protein F, putative [Haliangium ochraceum DSM 14365]
Length = 239
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 5/104 (4%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFC----LCGHCWSKI-HFITATEHILKNNKDNIDKD 65
++ +F ++ C + + LC C + +A + + ++
Sbjct: 1 MLAAVFDLLFAPGCAACDQPLTGAGARALPLCAVCAISLYPLDSACPRCAEPLEGPVNLL 60
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ + P + Y +R LKY R D+A +A
Sbjct: 61 CRRCRTRPPPFASAHAPYRYGGELARALRRLKYQRRADIARALA 104
>gi|302390143|ref|YP_003825964.1| phosphoribosyltransferase [Thermosediminibacter oceani DSM 16646]
gi|302200771|gb|ADL08341.1| phosphoribosyltransferase [Thermosediminibacter oceani DSM 16646]
Length = 240
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 4/100 (4%)
Query: 4 IIQTVKSIIIELFHCIYP--SICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+ +K I L ++P C + R+ LCG C ++ I+ +
Sbjct: 2 LYVGIKKITGFLLDALFPESPFCAVCGSRLPQGERLLCGSCRDRMEPISQPFCLKCGRPL 61
Query: 61 NIDKD-PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ K+ R+ +Y + ++ L KY
Sbjct: 62 YCENAVCADCSDKNRYFVGARAWGVYRGVLKQVIHLYKYR 101
>gi|238925132|ref|YP_002938649.1| putative amidophosphoribosyltransferase [Eubacterium rectale ATCC
33656]
gi|238876808|gb|ACR76515.1| predicted amidophosphoribosyltransferase [Eubacterium rectale ATCC
33656]
Length = 259
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 48/137 (35%), Gaps = 20/137 (14%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKN---- 57
++ +K I + + ++P CP+ II + + C K+ + + +
Sbjct: 8 GLVNKIKDIGRGVINLVFPPRCPVCDGIIGPVERYIHSRCCEKLFPVEQPQCMRCGKPVL 67
Query: 58 -------NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + + M++D Q +++ Y + KY +R + A AQ
Sbjct: 68 SERREYCDDCARALEHHRQMREDDSYRQGKALFAYKGSIKQTMYRFKYSNRREYAAYFAQ 127
Query: 111 --------WMFRVLEKI 119
W+ R +
Sbjct: 128 TAVERYSDWILRCGIDV 144
>gi|110807248|ref|YP_690768.1| gluconate periplasmic binding protein [Shigella flexneri 5 str.
8401]
gi|332281959|ref|ZP_08394372.1| conserved hypothetical protein [Shigella sp. D9]
gi|30043564|gb|AAP19284.1| hypothetical protein S4330 [Shigella flexneri 2a str. 2457T]
gi|56383886|gb|AAN44897.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110616796|gb|ABF05463.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|281602767|gb|ADA75751.1| gluconate periplasmic binding protein [Shigella flexneri 2002017]
gi|332104311|gb|EGJ07657.1| conserved hypothetical protein [Shigella sp. D9]
Length = 243
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 38 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105
>gi|323179061|gb|EFZ64635.1| protein gntX [Escherichia coli 1180]
gi|325498955|gb|EGC96814.1| gluconate periplasmic binding protein [Escherichia fergusonii
ECD227]
gi|332086008|gb|EGI91172.1| protein gntX [Shigella dysenteriae 155-74]
gi|332751297|gb|EGJ81700.1| protein gntX [Shigella flexneri 2747-71]
gi|332763600|gb|EGJ93839.1| comF family protein [Shigella flexneri 2930-71]
gi|332996635|gb|EGK16260.1| protein gntX [Shigella flexneri K-272]
gi|333012517|gb|EGK31898.1| protein gntX [Shigella flexneri K-304]
gi|333013044|gb|EGK32420.1| protein gntX [Shigella flexneri K-227]
Length = 215
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77
>gi|315607124|ref|ZP_07882128.1| competence protein [Prevotella buccae ATCC 33574]
gi|315251178|gb|EFU31163.1| competence protein [Prevotella buccae ATCC 33574]
Length = 228
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 14/109 (12%)
Query: 11 IIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
++ L+ ++P C I R+ LC C + T + + K
Sbjct: 1 MLRRLYDMLFPRACAICGQRLALGEQALCAVCNINLP---RTRFTEDPEDNAMAKTISSQ 57
Query: 70 MQKDLPLTQIRSVTLYCDM----SCVLVRLLKYHDRTDLAIMMAQWMFR 114
M + R+ LY + S L+ LKY + MM + M +
Sbjct: 58 MAVE------RATALYRHLSHSSSGALIYNLKYGGHPEYGDMMGELMAK 100
>gi|229829628|ref|ZP_04455697.1| hypothetical protein GCWU000342_01725 [Shuttleworthia satelles DSM
14600]
gi|229791617|gb|EEP27731.1| hypothetical protein GCWU000342_01725 [Shuttleworthia satelles DSM
14600]
Length = 258
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 6/108 (5%)
Query: 17 HCIYPSICPIYSRII---NLRFCLCGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQ 71
IYP CP R++ CG C +I + + + +
Sbjct: 5 SIIYPPTCPGCDRVLRPEERERGFCGSCLEQIVLAEEPCCKICGKALGDERQERCADCRK 64
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAI-MMAQWMFRVLEK 118
++ TQ +S+ +Y + KY R A+ + R
Sbjct: 65 EEHLFTQGKSLFIYRGPMKEAMYRFKYSRRLSYRRIFAAEALRRYGAD 112
>gi|194445852|ref|YP_002042762.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194404515|gb|ACF64737.1| protein GntX [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 227
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R +C C + + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSVCPQC--------------GLPARHPSLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R ++
Sbjct: 68 SNYTPPLSLLVHQLKFTRRNEI 89
>gi|157162890|ref|YP_001460208.1| gluconate periplasmic binding protein [Escherichia coli HS]
gi|161986432|ref|YP_312335.2| gluconate periplasmic binding protein [Shigella sonnei Ss046]
gi|191167292|ref|ZP_03029109.1| protein GntX [Escherichia coli B7A]
gi|191167880|ref|ZP_03029684.1| protein GntX [Escherichia coli B7A]
gi|209920871|ref|YP_002294955.1| gluconate periplasmic binding protein [Escherichia coli SE11]
gi|218555962|ref|YP_002388875.1| gluconate periplasmic binding protein [Escherichia coli IAI1]
gi|254163341|ref|YP_003046449.1| gluconate periplasmic binding protein [Escherichia coli B str.
REL606]
gi|297516951|ref|ZP_06935337.1| gluconate periplasmic binding protein [Escherichia coli OP50]
gi|300926896|ref|ZP_07142662.1| ComF family protein [Escherichia coli MS 182-1]
gi|300931054|ref|ZP_07146410.1| ComF family protein [Escherichia coli MS 187-1]
gi|309794684|ref|ZP_07689106.1| ComF family protein [Escherichia coli MS 145-7]
gi|331670235|ref|ZP_08371074.1| protein GntX [Escherichia coli TA271]
gi|157068570|gb|ABV07825.1| protein GntX [Escherichia coli HS]
gi|190902053|gb|EDV61798.1| protein GntX [Escherichia coli B7A]
gi|190902644|gb|EDV62376.1| protein GntX [Escherichia coli B7A]
gi|209914130|dbj|BAG79204.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218362730|emb|CAR00356.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli IAI1]
gi|242378936|emb|CAQ33734.1| protein involved in utilization of DNA as a carbon source
[Escherichia coli BL21(DE3)]
gi|253975242|gb|ACT40913.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli B str. REL606]
gi|253979398|gb|ACT45068.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli BL21(DE3)]
gi|300417100|gb|EFK00411.1| ComF family protein [Escherichia coli MS 182-1]
gi|300461109|gb|EFK24602.1| ComF family protein [Escherichia coli MS 187-1]
gi|308121734|gb|EFO58996.1| ComF family protein [Escherichia coli MS 145-7]
gi|323939367|gb|EGB35578.1| comF family protein [Escherichia coli E482]
gi|323959587|gb|EGB55239.1| comF family protein [Escherichia coli H489]
gi|324018650|gb|EGB87869.1| ComF family protein [Escherichia coli MS 117-3]
gi|324116390|gb|EGC10309.1| comF family protein [Escherichia coli E1167]
gi|331062297|gb|EGI34217.1| protein GntX [Escherichia coli TA271]
Length = 227
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 68 ADYAPPLSLLIHQLKFSRRSEI 89
>gi|62182012|ref|YP_218429.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161616553|ref|YP_001590518.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205354866|ref|YP_002228667.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207858750|ref|YP_002245401.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|62129645|gb|AAX67348.1| putative amidophosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161365917|gb|ABX69685.1| hypothetical protein SPAB_04369 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205274647|emb|CAR39701.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206710553|emb|CAR34911.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|322716500|gb|EFZ08071.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|326630012|gb|EGE36355.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 227
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R +C C + + +QK P ++ SV
Sbjct: 22 ICSVCARAVRQRVSVCPQC--------------GLPARHPSLPCGRCLQKPPPWQRLVSV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R ++
Sbjct: 68 SNYTPPLSLLVHQLKFTRRNEI 89
>gi|301645853|ref|ZP_07245767.1| ComF family protein [Escherichia coli MS 146-1]
gi|301075842|gb|EFK90648.1| ComF family protein [Escherichia coli MS 146-1]
Length = 215
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77
>gi|283798900|ref|ZP_06348053.1| putative competence protein [Clostridium sp. M62/1]
gi|291073364|gb|EFE10728.1| putative competence protein [Clostridium sp. M62/1]
Length = 256
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
Query: 20 YPSICPIYSRIINLRFCL-CGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQKDLPL 76
+P CP+ ++ + L C C K+ F+T K + + ++
Sbjct: 32 FPRRCPVCGDVVLPKGRLICPGCVKKLSFVTPPVCMKCGKEIDSGLLEYCPDCARRPKSF 91
Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTD 103
++ Y + + +KY ++ +
Sbjct: 92 EYGMALLNYNKTAAASMAAVKYRNKRE 118
>gi|254038580|ref|ZP_04872636.1| GntX [Escherichia sp. 1_1_43]
gi|331644113|ref|ZP_08345242.1| protein GntX [Escherichia coli H736]
gi|606348|gb|AAA58211.1| ORF_o243 [Escherichia coli str. K-12 substr. MG1655]
gi|226839086|gb|EEH71109.1| GntX [Escherichia sp. 1_1_43]
gi|331036407|gb|EGI08633.1| protein GntX [Escherichia coli H736]
Length = 243
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 38 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105
>gi|170018351|ref|YP_001723305.1| gluconate periplasmic binding protein [Escherichia coli ATCC 8739]
gi|169753279|gb|ACA75978.1| comF family protein [Escherichia coli ATCC 8739]
Length = 227
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 68 ADYAPPLSLLIHQLKFSRRSEI 89
>gi|164687113|ref|ZP_02211141.1| hypothetical protein CLOBAR_00739 [Clostridium bartlettii DSM
16795]
gi|164603998|gb|EDQ97463.1| hypothetical protein CLOBAR_00739 [Clostridium bartlettii DSM
16795]
Length = 272
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 10/108 (9%)
Query: 15 LFHCIYPS--ICPIYSRII--NLRFCLCGHCWSKIHFIT------ATEHILKNNKDNIDK 64
L IYP C I I + +C C+ ++HF+ + N + K
Sbjct: 27 LLDFIYPKNISCIICDNPIKLTNSYSICKDCFKELHFLKDACLKCGKPLVNHNLEYENIK 86
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
D ++ + S Y S ++ KY ++T +AQ M
Sbjct: 87 DCPSCKRRTFYFDRAISCIEYNKTSKKMILDFKYRNKTYFCKYVAQIM 134
>gi|134300912|ref|YP_001114408.1| phosphoribosyltransferase [Desulfotomaculum reducens MI-1]
gi|134053612|gb|ABO51583.1| phosphoribosyltransferase [Desulfotomaculum reducens MI-1]
Length = 237
Score = 47.6 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 4/85 (4%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQIRS 81
C + R + +C C + + + + P Q R+
Sbjct: 19 CQLCGR--TGDWDICPTCSHWLVQWEGKPKCQICGRSLAYPGVLCQECQHRQPPFVQARA 76
Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAI 106
V Y + LLKY R L
Sbjct: 77 VGPYEGGLRDAIHLLKYKGRKTLVP 101
>gi|307132918|ref|YP_003884934.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system [Dickeya
dadantii 3937]
gi|306530447|gb|ADN00378.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system [Dickeya
dadantii 3937]
Length = 234
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 6/99 (6%)
Query: 22 SICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
+ C + + + + +C HC + + + +Q+ P +
Sbjct: 6 AQCWLCQQPLYHSDHGICSHCRRHLPQPVTCCPRCGLPSASDALPCGRCLQQPPPWQSLL 65
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ-----WMFR 114
V+ Y L++ LK+ R +LA +A+ W+ R
Sbjct: 66 FVSDYRPPLSTLLKRLKFQGRAELAPALARLILLQWLAR 104
>gi|332085564|gb|EGI90730.1| protein gntX [Shigella boydii 5216-82]
Length = 227
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|298370454|ref|ZP_06981770.1| ComF/gntX family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281914|gb|EFI23403.1| ComF/gntX family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 240
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 24/95 (25%), Gaps = 3/95 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIH--FITAT-EHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + LC C + F L + +K ++
Sbjct: 17 RCVLCHDSAPASDGLCAGCAGDLASAFTDPAASCPLCFGFSAGAAVCGRCQKKPPRFERL 76
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ Y ++ K+ + +A M R
Sbjct: 77 WASVYYEPPVSSMIHQFKHLADLSMLPPLAGLMMR 111
>gi|293453719|ref|ZP_06664138.1| gluconate periplasmic binding protein [Escherichia coli B088]
gi|291321845|gb|EFE61276.1| gluconate periplasmic binding protein [Escherichia coli B088]
Length = 227
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|34540020|ref|NP_904499.1| competence protein F-like protein [Porphyromonas gingivalis W83]
gi|34396331|gb|AAQ65398.1| competence protein F-related protein [Porphyromonas gingivalis W83]
Length = 246
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 43/113 (38%), Gaps = 13/113 (11%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKI-HFITATEHILKNNKD 60
+ ++ +I ++ +P CP+ ++ +C C ++ +I ++ L
Sbjct: 7 GTGRHIRLLIRKVLDLFFPRYCPVCDSLLAETEIGVCPRCMVRMPRYIEGMQYGLDRLNG 66
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
++ D L S+ + ++ LKY +++ M+ + M
Sbjct: 67 DVYIDALYSLFI---FKE-------DGGVRPMIHALKYGGYSEIGEMLGR-MA 108
>gi|161485822|ref|NP_709190.3| gluconate periplasmic binding protein [Shigella flexneri 2a str.
301]
gi|161486382|ref|NP_839473.2| gluconate periplasmic binding protein [Shigella flexneri 2a str.
2457T]
gi|193068814|ref|ZP_03049774.1| protein GntX [Escherichia coli E110019]
gi|194431130|ref|ZP_03063423.1| protein GntX [Shigella dysenteriae 1012]
gi|218550671|ref|YP_002384462.1| gluconate periplasmic binding protein [Escherichia fergusonii ATCC
35469]
gi|218697096|ref|YP_002404763.1| gluconate periplasmic binding protein [Escherichia coli 55989]
gi|256020758|ref|ZP_05434623.1| gluconate periplasmic binding protein [Shigella sp. D9]
gi|260857520|ref|YP_003231411.1| gluconate periplasmic binding protein GntX [Escherichia coli
O26:H11 str. 11368]
gi|260870139|ref|YP_003236541.1| gluconate periplasmic binding protein GntX [Escherichia coli
O111:H- str. 11128]
gi|307311922|ref|ZP_07591560.1| comF family protein [Escherichia coli W]
gi|51701421|sp|Q83J92|GNTX_SHIFL RecName: Full=Protein GntX
gi|192957890|gb|EDV88333.1| protein GntX [Escherichia coli E110019]
gi|194420585|gb|EDX36661.1| protein GntX [Shigella dysenteriae 1012]
gi|218353828|emb|CAV00184.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli 55989]
gi|218358212|emb|CAQ90859.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia fergusonii ATCC 35469]
gi|257756169|dbj|BAI27671.1| gluconate periplasmic binding protein GntX [Escherichia coli
O26:H11 str. 11368]
gi|257766495|dbj|BAI37990.1| gluconate periplasmic binding protein GntX [Escherichia coli
O111:H- str. 11128]
gi|306908066|gb|EFN38566.1| comF family protein [Escherichia coli W]
gi|313647285|gb|EFS11737.1| protein gntX [Shigella flexneri 2a str. 2457T]
gi|315062691|gb|ADT77018.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli W]
gi|320199586|gb|EFW74176.1| gluconate periplasmic binding protein [Escherichia coli EC4100B]
gi|323154248|gb|EFZ40451.1| protein gntX [Escherichia coli EPECa14]
gi|323376721|gb|ADX48989.1| comF family protein [Escherichia coli KO11]
gi|324111726|gb|EGC05706.1| comF family protein [Escherichia fergusonii B253]
gi|332749485|gb|EGJ79902.1| protein gntX [Shigella flexneri K-671]
gi|332750332|gb|EGJ80743.1| protein gntX [Shigella flexneri 4343-70]
gi|332996396|gb|EGK16023.1| protein gntX [Shigella flexneri VA-6]
gi|332997062|gb|EGK16678.1| protein gntX [Shigella flexneri K-218]
Length = 227
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|224826043|ref|ZP_03699146.1| competence protein F [Lutiella nitroferrum 2002]
gi|224601680|gb|EEG07860.1| competence protein F [Lutiella nitroferrum 2002]
Length = 236
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 1/94 (1%)
Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPL 76
+ C + R LC C + + + A +
Sbjct: 13 RLFFNQPCLLCGTS-GTRHGLCPPCHACLPRLPAERCPHCAEPVAAGSLCGACQRHPPAF 71
Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + L+ KY R ++A + +
Sbjct: 72 DALHVSYRFDYPLDGLIHAFKYGKRLEMAGALGR 105
>gi|121997755|ref|YP_001002542.1| competence protein F [Halorhodospira halophila SL1]
gi|121589160|gb|ABM61740.1| competence protein F [Halorhodospira halophila SL1]
Length = 238
Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 2/100 (2%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
+ +V I + +YP C + + LC C + + + T +
Sbjct: 5 DAMHSVNKWIRNVPLALYPPRCRLCDAAGSDGLDLCRGCRADLPW--NTPCCPQCALPTD 62
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102
P Q+ Y L+ K+ R
Sbjct: 63 GTTPCPCRQRPPAFQHAVVPLRYEGAVESLITAFKFRGRL 102
>gi|88606693|ref|YP_505817.1| comF family protein [Anaplasma phagocytophilum HZ]
gi|88597756|gb|ABD43226.1| comF family protein [Anaplasma phagocytophilum HZ]
Length = 217
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Query: 25 PIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQIRSVT 83
LC C + I F+ I + ++ + L+ + SV
Sbjct: 1 MNCGIYTVRDAALCVSCINNIKFLQGYFCIKCGKNLEQNAGVCVRCTAFNSHLSALESVF 60
Query: 84 LYCDMSCVLVRLLK-YHDRTDLAIMMAQWMFRVLEKI 119
Y + S +V K Y D +++ A WMF +++
Sbjct: 61 EYDNTSKHMVLQFKFYGDISNI-KTYAGWMFEKGKEL 96
>gi|320181905|gb|EFW56811.1| gluconate periplasmic binding protein [Shigella boydii ATCC 9905]
Length = 227
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|257091917|ref|YP_003165558.1| phosphoribosyltransferase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044441|gb|ACV33629.1| phosphoribosyltransferase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 235
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 28/97 (28%), Gaps = 1/97 (1%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
++ + P C + + LC C + + + AT L + +
Sbjct: 10 LVRRSCKRLLPQDCLLCGAA-SGTTLLCPACATDLPRLPATRCPLCALPTPGGSVCGRCL 68
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107
+V Y LV+ KY R L
Sbjct: 69 TAPPHYDATLAVYRYAFPIDKLVQAFKYGHRLALGAW 105
>gi|89110597|ref|AP_004377.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli str. K-12 substr. W3110]
gi|90111589|ref|NP_417872.2| protein required for the utilization of DNA as a carbon source
[Escherichia coli str. K-12 substr. MG1655]
gi|170082929|ref|YP_001732249.1| gluconate periplasmic binding protein [Escherichia coli str. K-12
substr. DH10B]
gi|238902504|ref|YP_002928300.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli BW2952]
gi|253771758|ref|YP_003034589.1| gluconate periplasmic binding protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|256025859|ref|ZP_05439724.1| gluconate periplasmic binding protein [Escherichia sp. 4_1_40B]
gi|300815388|ref|ZP_07095613.1| ComF family protein [Escherichia coli MS 107-1]
gi|300946844|ref|ZP_07161085.1| ComF family protein [Escherichia coli MS 116-1]
gi|300956743|ref|ZP_07169012.1| ComF family protein [Escherichia coli MS 175-1]
gi|301023029|ref|ZP_07186839.1| ComF family protein [Escherichia coli MS 196-1]
gi|307140099|ref|ZP_07499455.1| gluconate periplasmic binding protein [Escherichia coli H736]
gi|6136739|sp|P46846|GNTX_ECOLI RecName: Full=Protein GntX
gi|85676628|dbj|BAE77878.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli str. K12 substr. W3110]
gi|87082263|gb|AAC76438.2| protein required for the utilization of DNA as a carbon source
[Escherichia coli str. K-12 substr. MG1655]
gi|169890764|gb|ACB04471.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli str. K-12 substr. DH10B]
gi|238861309|gb|ACR63307.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli BW2952]
gi|253322802|gb|ACT27404.1| comF family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|260447568|gb|ACX37990.1| comF family protein [Escherichia coli DH1]
gi|299880992|gb|EFI89203.1| ComF family protein [Escherichia coli MS 196-1]
gi|300316463|gb|EFJ66247.1| ComF family protein [Escherichia coli MS 175-1]
gi|300453499|gb|EFK17119.1| ComF family protein [Escherichia coli MS 116-1]
gi|300532280|gb|EFK53342.1| ComF family protein [Escherichia coli MS 107-1]
gi|309703823|emb|CBJ03164.1| putative competence protein [Escherichia coli ETEC H10407]
gi|315137989|dbj|BAJ45148.1| GntX [Escherichia coli DH1]
gi|315614681|gb|EFU95321.1| protein gntX [Escherichia coli 3431]
gi|323934597|gb|EGB30997.1| comF family protein [Escherichia coli E1520]
Length = 227
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|271502335|ref|YP_003335361.1| phosphoribosyltransferase [Dickeya dadantii Ech586]
gi|270345890|gb|ACZ78655.1| phosphoribosyltransferase [Dickeya dadantii Ech586]
Length = 239
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 5/92 (5%)
Query: 22 SICPIYSR-IINLRFCLCGHCWSKIH--FITATEHILKNNKDNIDKDPLKSMQKDLPLTQ 78
+ C + + + + +C HC + + L + + + +Q+ P
Sbjct: 6 AQCWLCQQPLYHSHHGICSHCCRHLPQPLVCCPRCGLPSASGIL--PCGRCLQQPPPWQS 63
Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ SV+ Y L++ K R++LA +A+
Sbjct: 64 LLSVSDYRPPLSHLIKRFKLQGRSELAPTLAR 95
>gi|77165567|ref|YP_344092.1| competence protein F [Nitrosococcus oceani ATCC 19707]
gi|254433456|ref|ZP_05046964.1| hypothetical protein NOC27_387 [Nitrosococcus oceani AFC27]
gi|76883881|gb|ABA58562.1| competence protein F [Nitrosococcus oceani ATCC 19707]
gi|207089789|gb|EDZ67060.1| hypothetical protein NOC27_387 [Nitrosococcus oceani AFC27]
Length = 246
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 1/99 (1%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
+ L+ +YP +C + + LC C + + Q
Sbjct: 10 LETLWRELYPPLCALCGAPGTRKHDLCAPCRRDLPAL-GAACYRCARPLPTAGICGACQQ 68
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
P S Y L+ LK+H + LA ++ Q
Sbjct: 69 HAPPQNCTFSPFRYAPPLDYLLLQLKFHGKLHLAPLLGQ 107
>gi|157372865|ref|YP_001480854.1| gluconate periplasmic binding protein [Serratia proteamaculans 568]
gi|157324629|gb|ABV43726.1| putative competence-related protein F [Serratia proteamaculans 568]
Length = 227
Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + + +C +C + T + + +Q+ P +
Sbjct: 7 RCWLCRQPLRLSHHGICSYCLRHLP--TKPLCCPRCGLPAGDAALPCGRCLQQPPPWQAL 64
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
V+ Y L++ K+ +LA ++A+
Sbjct: 65 VFVSDYQAPLRQLIKKFKFQHTPELAPLLAR 95
>gi|169832221|ref|YP_001718203.1| phosphoribosyltransferase [Candidatus Desulforudis audaxviator
MP104C]
gi|169639065|gb|ACA60571.1| phosphoribosyltransferase [Candidatus Desulforudis audaxviator
MP104C]
Length = 214
Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 6/84 (7%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKD------PLKSMQKDLPLTQIRSVTLYCDMSC 90
+C C +I ++ + + + + P R+ Y + C
Sbjct: 1 MCPACRGEIEGLSGQPYCDRCGRFFSPVPAPEPRLCRDCRRVARPFECCRAYAPYEGVLC 60
Query: 91 VLVRLLKYHDRTDLAIMMAQWMFR 114
V LKY R +LA + + + R
Sbjct: 61 EAVHRLKYGRRRELAGPLGELLAR 84
>gi|315923979|ref|ZP_07920207.1| competence protein F [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622819|gb|EFV02772.1| competence protein F [Pseudoramibacter alactolyticus ATCC 23263]
Length = 248
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 6/118 (5%)
Query: 6 QTVKSIIIELFHCIYPS--ICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKN--NKD 60
+TVK++ L ++ CPI R + + R LC C +H T D
Sbjct: 2 KTVKAMARWLSRLVFSDNDSCPICGRVLFDERRFLCSRCEEDLHRATGRVCKGCGRVLVD 61
Query: 61 NIDKDPLKSMQK-DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
++ + ++ + +Y + L+ K+ R LA+ + M +
Sbjct: 62 DVAVLCPECRREMSPVFDGGFTWLVYGQSASRLMYSFKFDGRRQLALWAGREMGKAAA 119
>gi|312968275|ref|ZP_07782485.1| protein gntX [Escherichia coli 2362-75]
gi|312287100|gb|EFR15010.1| protein gntX [Escherichia coli 2362-75]
Length = 215
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77
>gi|323188997|gb|EFZ74281.1| protein gntX [Escherichia coli RN587/1]
Length = 215
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77
>gi|323974783|gb|EGB69895.1| comF family protein [Escherichia coli TW10509]
Length = 215
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R ++
Sbjct: 56 ADYAPPLSPLIHQLKFSRRCEI 77
>gi|300985359|ref|ZP_07177415.1| ComF family protein [Escherichia coli MS 45-1]
gi|300408100|gb|EFJ91638.1| ComF family protein [Escherichia coli MS 45-1]
Length = 227
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +Q P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQNPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|283787952|ref|YP_003367817.1| competence protein [Citrobacter rodentium ICC168]
gi|282951406|emb|CBG91105.1| putative competence protein [Citrobacter rodentium ICC168]
Length = 227
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 14/88 (15%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + R R LC C + + +QK P ++ ++
Sbjct: 22 ICSVCQRAARRRVSLCPQC--------------GLPSTHATLSCGRCLQKPPPWQRLIAI 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
Y L+ LK+ R ++A +A+
Sbjct: 68 GDYAPPLSALIHQLKFSRRAEIAPALAR 95
>gi|58580077|ref|YP_199093.1| competence protein F [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84622075|ref|YP_449447.1| competence protein F [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58424671|gb|AAW73708.1| competence protein F [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84366015|dbj|BAE67173.1| competence protein F [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 243
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---PLKS 69
+F + PS+C + + LC C + + + + +
Sbjct: 20 QRVFRLLLPSLCLVCAEAGTADGDLCPSCRAALP-DHGHACLCCATQLFASDGVALCGQC 78
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRVLEKI 119
+Q+ PL ++ + Y L+R K+H DLA ++++ M R ++
Sbjct: 79 LQEPPPLQRVHACFTYRWPVDGLLRRFKFH--QDLAAGRLLSELMARRCVEL 128
>gi|12518043|gb|AAG58514.1|AE005563_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13363729|dbj|BAB37678.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209756448|gb|ACI76536.1| hypothetical protein ECs4254 [Escherichia coli]
gi|209756450|gb|ACI76537.1| hypothetical protein ECs4254 [Escherichia coli]
gi|209756452|gb|ACI76538.1| hypothetical protein ECs4254 [Escherichia coli]
gi|209756454|gb|ACI76539.1| hypothetical protein ECs4254 [Escherichia coli]
gi|209756456|gb|ACI76540.1| hypothetical protein ECs4254 [Escherichia coli]
Length = 243
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 84 ADYAPPLSLLIHQLKFSRRSEI 105
>gi|189401819|ref|ZP_02778173.2| protein GntX [Escherichia coli O157:H7 str. EC4401]
gi|189405505|ref|ZP_02822191.2| protein GntX [Escherichia coli O157:H7 str. EC508]
gi|189358967|gb|EDU77386.1| protein GntX [Escherichia coli O157:H7 str. EC4401]
gi|189380059|gb|EDU98475.1| protein GntX [Escherichia coli O157:H7 str. EC508]
gi|320191575|gb|EFW66225.1| gluconate periplasmic binding protein [Escherichia coli O157:H7
str. EC1212]
gi|326337623|gb|EGD61458.1| gluconate periplasmic binding protein [Escherichia coli O157:H7
str. 1044]
gi|326344626|gb|EGD68375.1| gluconate periplasmic binding protein [Escherichia coli O157:H7
str. 1125]
Length = 215
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 56 ADYAPPLSLLIHQLKFSRRSEI 77
>gi|187775692|ref|ZP_02992680.1| protein GntX [Escherichia coli O157:H7 str. EC4196]
gi|188024504|ref|ZP_02772131.2| protein GntX [Escherichia coli O157:H7 str. EC4113]
gi|189010096|ref|ZP_02804504.2| protein GntX [Escherichia coli O157:H7 str. EC4076]
gi|189402773|ref|ZP_02790768.2| protein GntX [Escherichia coli O157:H7 str. EC4486]
gi|189403746|ref|ZP_02784445.2| protein GntX [Escherichia coli O157:H7 str. EC4501]
gi|189404697|ref|ZP_02810225.2| protein GntX [Escherichia coli O157:H7 str. EC869]
gi|208809535|ref|ZP_03251872.1| protein GntX [Escherichia coli O157:H7 str. EC4206]
gi|208813850|ref|ZP_03255179.1| protein GntX [Escherichia coli O157:H7 str. EC4045]
gi|208821693|ref|ZP_03262013.1| protein GntX [Escherichia coli O157:H7 str. EC4042]
gi|209396165|ref|YP_002272849.1| protein GntX [Escherichia coli O157:H7 str. EC4115]
gi|217324234|ref|ZP_03440318.1| protein GntX [Escherichia coli O157:H7 str. TW14588]
gi|187771691|gb|EDU35535.1| protein GntX [Escherichia coli O157:H7 str. EC4196]
gi|188018351|gb|EDU56473.1| protein GntX [Escherichia coli O157:H7 str. EC4113]
gi|189002345|gb|EDU71331.1| protein GntX [Escherichia coli O157:H7 str. EC4076]
gi|189364761|gb|EDU83180.1| protein GntX [Escherichia coli O157:H7 str. EC4486]
gi|189369879|gb|EDU88295.1| protein GntX [Escherichia coli O157:H7 str. EC4501]
gi|189374500|gb|EDU92916.1| protein GntX [Escherichia coli O157:H7 str. EC869]
gi|208729336|gb|EDZ78937.1| protein GntX [Escherichia coli O157:H7 str. EC4206]
gi|208735127|gb|EDZ83814.1| protein GntX [Escherichia coli O157:H7 str. EC4045]
gi|208741816|gb|EDZ89498.1| protein GntX [Escherichia coli O157:H7 str. EC4042]
gi|209157565|gb|ACI34998.1| protein GntX [Escherichia coli O157:H7 str. EC4115]
gi|217320455|gb|EEC28879.1| protein GntX [Escherichia coli O157:H7 str. TW14588]
Length = 248
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 43 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 88
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 89 ADYAPPLSLLIHQLKFSRRSEI 110
>gi|224585305|ref|YP_002639104.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224469833|gb|ACN47663.1| putative competence protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 215
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R + R +C C + + +QK P + SV
Sbjct: 10 ICSVCARAVRQRVSVCPQC--------------GLPARHPSLPCGRCLQKPPPWQHLVSV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y +LV LK+ R ++
Sbjct: 56 SNYTPPLSLLVHQLKFTRRNEI 77
>gi|331649211|ref|ZP_08350297.1| protein GntX [Escherichia coli M605]
gi|331041709|gb|EGI13853.1| protein GntX [Escherichia coli M605]
Length = 243
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + +QK P ++ +V
Sbjct: 38 ICSVCSRAARTDKTLCPQC--------GLPATYS------HLPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105
>gi|282877098|ref|ZP_06285940.1| ComF family protein [Prevotella buccalis ATCC 35310]
gi|281300780|gb|EFA93107.1| ComF family protein [Prevotella buccalis ATCC 35310]
Length = 231
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 10/100 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ S I + I P C R + LC C + T + D D +
Sbjct: 1 MISFISRILDLISPRTCVECRRRLTEGEQVLCASCNLHLP---RTHY----EDDAYDNEM 53
Query: 67 LKSMQKDLPLTQIRSVTLY--CDMSCVLVRLLKYHDRTDL 104
+ +P+ + ++ Y + ++ LKY D ++
Sbjct: 54 AQLFWVRIPIERAAALFFYQARSEASRMIYALKYGDHPEI 93
>gi|331674901|ref|ZP_08375658.1| protein GntX [Escherichia coli TA280]
gi|331067810|gb|EGI39208.1| protein GntX [Escherichia coli TA280]
Length = 243
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105
>gi|293406991|ref|ZP_06650915.1| gluconate periplasmic binding protein [Escherichia coli FVEC1412]
gi|298382733|ref|ZP_06992328.1| gluconate periplasmic binding protein [Escherichia coli FVEC1302]
gi|291425802|gb|EFE98836.1| gluconate periplasmic binding protein [Escherichia coli FVEC1412]
gi|298276569|gb|EFI18087.1| gluconate periplasmic binding protein [Escherichia coli FVEC1302]
Length = 215
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77
>gi|160893717|ref|ZP_02074501.1| hypothetical protein CLOL250_01271 [Clostridium sp. L2-50]
gi|156864702|gb|EDO58133.1| hypothetical protein CLOL250_01271 [Clostridium sp. L2-50]
Length = 240
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 4/94 (4%)
Query: 13 IELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNK--DNIDKDPLKS 69
L ++P CPI ++ +C + ++T + + + +
Sbjct: 9 RTLMDLVFPRRCPICDAVMAYGEQGICNR-HKTLPYVTGPVCMKCGKELSEAEQEYCEDC 67
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
+ + V Y + V +KYH++ +
Sbjct: 68 RRHTRSFERAYPVFRYEEPVASSVLAIKYHNKRE 101
>gi|284822068|gb|ADB98038.1| gluconate periplasmic binding protein [Escherichia coli]
Length = 243
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105
>gi|26110443|gb|AAN82628.1|AE016768_46 Hypothetical protein yhgH [Escherichia coli CFT073]
Length = 248
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 43 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 88
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 89 ADYAPPLSPLIHQLKFSRRSEI 110
>gi|117625678|ref|YP_859001.1| gluconate periplasmic binding protein [Escherichia coli APEC O1]
gi|81247180|gb|ABB67888.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|115514802|gb|ABJ02877.1| conserved hypothetical protein [Escherichia coli APEC O1]
Length = 243
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 84 ADYAPPLSPLIHQLKFSRRSEI 105
>gi|227883547|ref|ZP_04001352.1| competence protein F [Escherichia coli 83972]
gi|227839426|gb|EEJ49892.1| competence protein F [Escherichia coli 83972]
gi|320185944|gb|EFW60693.1| gluconate periplasmic binding protein [Shigella flexneri CDC
796-83]
gi|332090224|gb|EGI95322.1| protein gntX [Shigella boydii 3594-74]
Length = 215
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77
>gi|237703143|ref|ZP_04533624.1| gluconate periplasmic binding protein [Escherichia sp. 3_2_53FAA]
gi|91074462|gb|ABE09343.1| hypothetical protein YhgH [Escherichia coli UTI89]
gi|226902407|gb|EEH88666.1| gluconate periplasmic binding protein [Escherichia sp. 3_2_53FAA]
Length = 248
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 43 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 88
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 89 ADYAPPLSPLIHQLKFSRRSEI 110
>gi|254796780|ref|YP_003081617.1| putative competence protein F [Neorickettsia risticii str.
Illinois]
gi|254590018|gb|ACT69380.1| putative competence protein F [Neorickettsia risticii str.
Illinois]
Length = 269
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYS---RIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
++ +K ++P C I S ++ + +C C +++H + H K
Sbjct: 30 TVRLIKCTFKSFLTFLFPDCCIICSSKEELVE--YGMCKPCRNEVHLLKDHLHCYCCGKK 87
Query: 61 N-IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ + ++V +Y ++ +K+HD T + +A+ + R
Sbjct: 88 MKTSNLCITCAASKPKFDEAKAVFVYNAYVSAFMQKIKFHDGTFITKSLAKMILR 142
>gi|323162798|gb|EFZ48635.1| protein gntX [Escherichia coli E128010]
gi|323944365|gb|EGB40440.1| comF family protein [Escherichia coli H120]
Length = 215
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 10 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77
>gi|58699163|ref|ZP_00373983.1| putative amidophosphoribosyltransferase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534319|gb|EAL58498.1| putative amidophosphoribosyltransferase [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 194
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
K + P +RSV Y S ++ K+ D + + A+W+ + +
Sbjct: 12 CGKCIINPPPFKVLRSVFAYDQHSRNMIINFKFFDNLNYVKIYAKWIHQANQD 64
>gi|323966226|gb|EGB61662.1| comF family protein [Escherichia coli M863]
gi|327251049|gb|EGE62742.1| protein gntX [Escherichia coli STEC_7v]
Length = 227
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R ++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRCEI 89
>gi|320639695|gb|EFX09289.1| DNA utilization protein GntX [Escherichia coli O157:H7 str. G5101]
Length = 227
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 68 ADYAPPLSLLIHQLKFSRRSEI 89
>gi|313905062|ref|ZP_07838432.1| competence protein ComFC [Eubacterium cellulosolvens 6]
gi|313470132|gb|EFR65464.1| competence protein ComFC [Eubacterium cellulosolvens 6]
Length = 238
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 3/102 (2%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKD--PLK 68
+ +YP CP+ R++ +C C K+ +I + + +
Sbjct: 4 FSRISELLYPRHCPVCDRLLAGNEPYICRKCAGKVKWIRGPVCMKCGRPLDAENKEYCDN 63
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
++ + + +Y + + KY R + A A+
Sbjct: 64 CRRRSHLYERNLAPFVYGNEIQTSIMRFKYGGRAEYAAFYAK 105
>gi|215488694|ref|YP_002331125.1| gluconate periplasmic binding protein [Escherichia coli O127:H6
str. E2348/69]
gi|215266766|emb|CAS11206.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli O127:H6 str. E2348/69]
Length = 227
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|110643646|ref|YP_671376.1| gluconate periplasmic binding protein [Escherichia coli 536]
gi|191171572|ref|ZP_03033120.1| protein GntX [Escherichia coli F11]
gi|300987299|ref|ZP_07178107.1| ComF family protein [Escherichia coli MS 200-1]
gi|110345238|gb|ABG71475.1| putative amidophosphoribosyltransferase [Escherichia coli 536]
gi|190908199|gb|EDV67790.1| protein GntX [Escherichia coli F11]
gi|300306167|gb|EFJ60687.1| ComF family protein [Escherichia coli MS 200-1]
gi|324014595|gb|EGB83814.1| ComF family protein [Escherichia coli MS 60-1]
Length = 227
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|161367506|ref|NP_289953.2| gluconate periplasmic binding protein [Escherichia coli O157:H7
EDL933]
gi|162139751|ref|NP_312282.2| gluconate periplasmic binding protein [Escherichia coli O157:H7
str. Sakai]
gi|195934902|ref|ZP_03080284.1| gluconate periplasmic binding protein [Escherichia coli O157:H7
str. EC4024]
gi|254795328|ref|YP_003080165.1| gluconate periplasmic binding protein [Escherichia coli O157:H7
str. TW14359]
gi|261224694|ref|ZP_05938975.1| gluconate periplasmic binding protein [Escherichia coli O157:H7
str. FRIK2000]
gi|261254411|ref|ZP_05946944.1| gluconate periplasmic binding protein [Escherichia coli O157:H7
str. FRIK966]
gi|291284749|ref|YP_003501567.1| gluconate periplasmic binding protein [Escherichia coli O55:H7 str.
CB9615]
gi|51701438|sp|Q8X715|GNTX_ECO57 RecName: Full=Protein GntX
gi|254594728|gb|ACT74089.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli O157:H7 str. TW14359]
gi|290764622|gb|ADD58583.1| gluconate periplasmic binding protein [Escherichia coli O55:H7 str.
CB9615]
gi|320645193|gb|EFX14209.1| DNA utilization protein GntX [Escherichia coli O157:H- str. 493-89]
gi|320650504|gb|EFX18970.1| DNA utilization protein GntX [Escherichia coli O157:H- str. H 2687]
gi|320655696|gb|EFX23619.1| DNA utilization protein GntX [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320661480|gb|EFX28895.1| DNA utilization protein GntX [Escherichia coli O55:H7 str. USDA
5905]
gi|320666503|gb|EFX33486.1| DNA utilization protein GntX [Escherichia coli O157:H7 str. LSU-61]
Length = 227
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 68 ADYAPPLSLLIHQLKFSRRSEI 89
>gi|15806406|ref|NP_295112.1| competence protein ComF [Deinococcus radiodurans R1]
gi|6459142|gb|AAF10957.1|AE001984_7 competence protein ComF, putative [Deinococcus radiodurans R1]
Length = 219
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 16/99 (16%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
+I+L + P CP + LC C +++ PL +
Sbjct: 14 MIDLLRVLLPRACPGCGAQLGRAAGLCDRCRAELR------------PRVERHSPLSAQA 61
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+T R Y + VR LKY D+A + +
Sbjct: 62 TPHLVTLGR----YQGVPRRAVRALKYGGARDVAGPLGR 96
>gi|114321584|ref|YP_743267.1| competence protein F [Alkalilimnicola ehrlichii MLHE-1]
gi|114227978|gb|ABI57777.1| competence protein F [Alkalilimnicola ehrlichii MLHE-1]
Length = 262
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 22/94 (23%), Gaps = 4/94 (4%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILK---NNKDNIDKD 65
I +YP C + LC C + + ++ D
Sbjct: 9 RAIGHGLDRLYPPRCVLCGEPGQPPALDLCAGCQADLPWVVNPCARCGQPLPEDSAADGL 68
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + Y LV K+H
Sbjct: 69 CADCLCWPPRFDKAVVPLDYRFPVDRLVTGFKFH 102
>gi|188994134|ref|YP_001928386.1| probable amidophosphoribosyl-transferase [Porphyromonas gingivalis
ATCC 33277]
gi|188593814|dbj|BAG32789.1| probable amidophosphoribosyl-transferase [Porphyromonas gingivalis
ATCC 33277]
Length = 246
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 42/113 (37%), Gaps = 13/113 (11%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKI-HFITATEHILKNNKD 60
+ ++ +I ++ +P CP+ ++ +C C ++ +I ++ L
Sbjct: 7 GTGRHIRLLIRKVLDLFFPRYCPVCDSLLAETEIGVCPRCMVRMPRYIEGMQYGLDRLNG 66
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
++ D L + + ++ LKY +++ M+ + M
Sbjct: 67 DVYIDALYGLFI---FKE-------DGGVRPMIHALKYGGYSEIGEMLGR-MA 108
>gi|88855604|ref|ZP_01130267.1| competence protein F [marine actinobacterium PHSC20C1]
gi|88814928|gb|EAR24787.1| competence protein F [marine actinobacterium PHSC20C1]
Length = 237
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 22/112 (19%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
++ + + + + P C R LC C + I
Sbjct: 3 AALREAVRDAWSLLMPVECAGCQRH---DLSLCKEC----------------AECLIAAP 43
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
++ + + Y ++ K RTD A ++Q + L
Sbjct: 44 ---TIHATPRGLRTYAAVRYEGRVRRVILAFKNQHRTDQARPLSQALLPALR 92
>gi|313158283|gb|EFR57685.1| comF family protein [Alistipes sp. HGB5]
Length = 240
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 11/111 (9%)
Query: 11 IIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
++ ++ +P CP+ + +C C T L D L
Sbjct: 7 LLSDVAALFFPPRCPVCGVPLAQGERTVCTLC--------RTTAPLTGFWLEADNPLLAK 58
Query: 70 MQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ LP+ + Y S L+R KY A M +W R L++
Sbjct: 59 CRDMLPVERASGFLYYIHGSGWRELIRGFKYRGAWRTARAMGEWYGRCLKE 109
>gi|300919300|ref|ZP_07135814.1| ComF family protein [Escherichia coli MS 115-1]
gi|300413615|gb|EFJ96925.1| ComF family protein [Escherichia coli MS 115-1]
Length = 227
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|293412831|ref|ZP_06655499.1| gluconate periplasmic binding protein [Escherichia coli B354]
gi|300907443|ref|ZP_07125090.1| ComF family protein [Escherichia coli MS 84-1]
gi|301302292|ref|ZP_07208424.1| ComF family protein [Escherichia coli MS 124-1]
gi|291468478|gb|EFF10971.1| gluconate periplasmic binding protein [Escherichia coli B354]
gi|300400858|gb|EFJ84396.1| ComF family protein [Escherichia coli MS 84-1]
gi|300842455|gb|EFK70215.1| ComF family protein [Escherichia coli MS 124-1]
gi|315256004|gb|EFU35972.1| ComF family protein [Escherichia coli MS 85-1]
Length = 227
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|218707004|ref|YP_002414523.1| gluconate periplasmic binding protein [Escherichia coli UMN026]
gi|300898898|ref|ZP_07117199.1| ComF family protein [Escherichia coli MS 198-1]
gi|331665019|ref|ZP_08365920.1| protein GntX [Escherichia coli TA143]
gi|218434101|emb|CAR15018.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli UMN026]
gi|284923405|emb|CBG36499.1| putative competence protein [Escherichia coli 042]
gi|300357460|gb|EFJ73330.1| ComF family protein [Escherichia coli MS 198-1]
gi|331057529|gb|EGI29515.1| protein GntX [Escherichia coli TA143]
Length = 227
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|330909446|gb|EGH37960.1| hypothetical protein ECAA86_03648 [Escherichia coli AA86]
Length = 227
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------GLPATYS------HLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|225023962|ref|ZP_03713154.1| hypothetical protein EIKCOROL_00829 [Eikenella corrodens ATCC
23834]
gi|224942987|gb|EEG24196.1| hypothetical protein EIKCOROL_00829 [Eikenella corrodens ATCC
23834]
Length = 302
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + + LCG C + + L +K P TQ+
Sbjct: 84 RCILCHEL-SGSQSLCGGCTADLHCLRLDARRRCPLCAGISASGLPCGHCQRKPPPQTQL 142
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y L+ K+ R DL +A+ M
Sbjct: 143 NAAFAYRPPLSNLLYAYKFLGRNDLYAALAELML 176
>gi|312797394|ref|YP_004030316.1| Amidophosphoribosyltransferase family protein [Burkholderia
rhizoxinica HKI 454]
gi|312169169|emb|CBW76172.1| Amidophosphoribosyltransferase family protein [Burkholderia
rhizoxinica HKI 454]
Length = 317
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 8/119 (6%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHFITATEHILKNNKD 60
+ ++S+ + P+ C + + LC C W++
Sbjct: 83 VAKLRSLCHSAWRHALPTQCALCGNL--SHDVLCDACDEIYWNEARL--RCPRCALPLPR 138
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
N+ +Q ++ Y LV LK+ R +L A+ + + +
Sbjct: 139 NVATHCSFCVQTRPAFDATVTLADYAPPLDQLVADLKFRSRIELGRDFARRLALASQDL 197
>gi|301019566|ref|ZP_07183728.1| ComF family protein [Escherichia coli MS 69-1]
gi|300399191|gb|EFJ82729.1| ComF family protein [Escherichia coli MS 69-1]
Length = 227
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRASRSDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|160891529|ref|ZP_02072532.1| hypothetical protein BACUNI_03981 [Bacteroides uniformis ATCC 8492]
gi|317478364|ref|ZP_07937528.1| comF family protein [Bacteroides sp. 4_1_36]
gi|156858936|gb|EDO52367.1| hypothetical protein BACUNI_03981 [Bacteroides uniformis ATCC 8492]
gi|316905523|gb|EFV27313.1| comF family protein [Bacteroides sp. 4_1_36]
Length = 234
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 19/115 (16%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
T K+ + H +P C + + +C C + + N
Sbjct: 3 NTFKAWFLSFVHLFFPRQCAVCGSSLQEGEEGICIRC------------NMNMPRTNYHL 50
Query: 65 DPLKSMQK----DLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
S+++ +PL + S Y S ++ LKY R DL +M ++M
Sbjct: 51 REDNSVERMFWGKIPLERGTSFFYYHKGSDFRHILHQLKYGGRKDLGEIMGRFMA 105
>gi|189465282|ref|ZP_03014067.1| hypothetical protein BACINT_01628 [Bacteroides intestinalis DSM
17393]
gi|189437556|gb|EDV06541.1| hypothetical protein BACINT_01628 [Bacteroides intestinalis DSM
17393]
Length = 234
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 11/111 (9%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
TVK + LFH +P C + ++ +C HC I KDN+
Sbjct: 3 NTVKIWLGPLFHLFFPRCCVVCGAPLVEGEEAICTHC-----NINMPRTNYHKVKDNL-- 55
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+ +PL + S Y S ++ KY R +L +M ++M
Sbjct: 56 -VERIFWGKIPLERATSYFFYRKGSDFRKILHQFKYGGRKELGAIMGRFMA 105
>gi|157158776|ref|YP_001464871.1| gluconate periplasmic binding protein [Escherichia coli E24377A]
gi|157080806|gb|ABV20514.1| protein GntX [Escherichia coli E24377A]
Length = 227
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|193061813|ref|ZP_03042910.1| protein GntX [Escherichia coli E22]
gi|194427043|ref|ZP_03059595.1| protein GntX [Escherichia coli B171]
gi|260846197|ref|YP_003223975.1| gluconate periplasmic binding protein GntX [Escherichia coli
O103:H2 str. 12009]
gi|192932603|gb|EDV85200.1| protein GntX [Escherichia coli E22]
gi|194415004|gb|EDX31274.1| protein GntX [Escherichia coli B171]
gi|257761344|dbj|BAI32841.1| gluconate periplasmic binding protein GntX [Escherichia coli
O103:H2 str. 12009]
Length = 227
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|331685055|ref|ZP_08385641.1| protein GntX [Escherichia coli H299]
gi|331077426|gb|EGI48638.1| protein GntX [Escherichia coli H299]
Length = 227
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|161486090|ref|NP_756054.2| gluconate periplasmic binding protein [Escherichia coli CFT073]
gi|161984841|ref|YP_409717.2| gluconate periplasmic binding protein [Shigella boydii Sb227]
gi|162138354|ref|YP_542874.2| gluconate periplasmic binding protein [Escherichia coli UTI89]
gi|218560471|ref|YP_002393384.1| gluconate periplasmic binding protein [Escherichia coli S88]
gi|218702158|ref|YP_002409787.1| gluconate periplasmic binding protein [Escherichia coli IAI39]
gi|293416815|ref|ZP_06659452.1| gluconate periplasmic binding protein [Escherichia coli B185]
gi|300937288|ref|ZP_07152131.1| ComF family protein [Escherichia coli MS 21-1]
gi|301050375|ref|ZP_07197264.1| ComF family protein [Escherichia coli MS 185-1]
gi|331659702|ref|ZP_08360640.1| protein GntX [Escherichia coli TA206]
gi|51701423|sp|Q8FCT3|GNTX_ECOL6 RecName: Full=Protein GntX
gi|218367240|emb|CAR05014.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli S88]
gi|218372144|emb|CAR20006.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli IAI39]
gi|291431391|gb|EFF04376.1| gluconate periplasmic binding protein [Escherichia coli B185]
gi|294492334|gb|ADE91090.1| protein GntX [Escherichia coli IHE3034]
gi|300298004|gb|EFJ54389.1| ComF family protein [Escherichia coli MS 185-1]
gi|300457647|gb|EFK21140.1| ComF family protein [Escherichia coli MS 21-1]
gi|307555499|gb|ADN48274.1| protein GntX [Escherichia coli ABU 83972]
gi|307628475|gb|ADN72779.1| gluconate periplasmic binding protein [Escherichia coli UM146]
gi|315286087|gb|EFU45525.1| ComF family protein [Escherichia coli MS 110-3]
gi|315291746|gb|EFU51102.1| ComF family protein [Escherichia coli MS 153-1]
gi|315295926|gb|EFU55235.1| ComF family protein [Escherichia coli MS 16-3]
gi|323950070|gb|EGB45953.1| comF family protein [Escherichia coli H252]
gi|323954650|gb|EGB50432.1| comF family protein [Escherichia coli H263]
gi|324009391|gb|EGB78610.1| ComF family protein [Escherichia coli MS 57-2]
gi|331052917|gb|EGI24950.1| protein GntX [Escherichia coli TA206]
gi|332345366|gb|AEE58700.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 227
Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|110639861|ref|YP_680071.1| amidophosphoribosyltransferase [Cytophaga hutchinsonii ATCC 33406]
gi|110282542|gb|ABG60728.1| amidophosphoribosyltransferase [Cytophaga hutchinsonii ATCC 33406]
Length = 236
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 15/124 (12%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNK 59
M I +++ + L ++P C + ++ +C C S L
Sbjct: 1 MKKIFKSIANSANCLADVLFPPHCLVCDSGLVLGETDVCSTCLS----------TLPTVN 50
Query: 60 DNIDKDPL---KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA-IMMAQWMFRV 115
D+ D L S++ + + + ++ +KY D D+A + W R+
Sbjct: 51 DDYSPDSLYLRLSIELRPSFVWAYLLFDSKNKTQKILHAIKYGDAPDIAVRLAMIWTDRI 110
Query: 116 LEKI 119
E +
Sbjct: 111 RESL 114
>gi|222035114|emb|CAP77859.1| Protein gntX [Escherichia coli LF82]
gi|312947961|gb|ADR28788.1| gluconate periplasmic binding protein [Escherichia coli O83:H1 str.
NRG 857C]
Length = 227
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|270295382|ref|ZP_06201583.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274629|gb|EFA20490.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 234
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 33/103 (32%), Gaps = 11/103 (10%)
Query: 14 ELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
H +P C + I+ +C C + N D +
Sbjct: 11 SFVHLFFPRQCAVCGAILQEGEEGICMKCNMDM--------PRTNYHLRKDNPVERMFWG 62
Query: 73 DLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+PL S Y S ++ LKY R DL +M Q+M
Sbjct: 63 KIPLEHATSCFFYHKGSDFRRILHQLKYGGRKDLGEVMGQFMA 105
>gi|298206933|ref|YP_003715112.1| putative amidophosphoribosyl-transferase [Croceibacter atlanticus
HTCC2559]
gi|83849567|gb|EAP87435.1| putative amidophosphoribosyl-transferase [Croceibacter atlanticus
HTCC2559]
Length = 226
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 15/108 (13%)
Query: 11 IIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIH----FITATEHILKNNKDNIDKD 65
+I + ++P+ C + + + LC C + F + + K + +
Sbjct: 1 MINDFIQLLFPNACVVCNATLPKDLNTLCVACSDDLPEAPMFYNSPTQVEKMFYGRLPLE 60
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
S+ + + L+ LKY ++ + +WM
Sbjct: 61 HGVSLLT---FEK-------KGTTQKLMHQLKYRGDEQISEYLGKWMA 98
>gi|224368951|ref|YP_002603115.1| ComF [Desulfobacterium autotrophicum HRM2]
gi|223691668|gb|ACN14951.1| ComF [Desulfobacterium autotrophicum HRM2]
Length = 291
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 28/141 (19%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRII-------------------NLRFCLCGHCWS 43
A+I+ + + ++P C + I L +C C
Sbjct: 18 ALIRCLTRLGRGALTALFPDKCLVCGAYIRCLHDLAPVSDNLEALFESTLARVVCSKCLE 77
Query: 44 K--IHFIT------ATEHILKNNKDNIDKDPLKSMQKDLPLT-QIRSVTLYCDMSCVLVR 94
+ + + + ++++ D +K+ Q + + R+ + + LV
Sbjct: 78 QGFTPVLPPLCTCCGKPFLSRAGENHLCFDCIKAAQTGRFMVGRARAFAAHDLLLRDLVH 137
Query: 95 LLKYHDRTDLAIMMAQWMFRV 115
L KY + LA + + MF
Sbjct: 138 LFKYGKKICLARPLGRLMFHA 158
>gi|312879804|ref|ZP_07739604.1| phosphoribosyltransferase [Aminomonas paucivorans DSM 12260]
gi|310783095|gb|EFQ23493.1| phosphoribosyltransferase [Aminomonas paucivorans DSM 12260]
Length = 219
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 11/103 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+ I L H ++P CP+ R+ + C C + A +L
Sbjct: 1 MHPWIAPLLHLLWPCSCPVCGRVGEVA---CPPCLESLVLPLAPHCLLCQGPF----PCP 53
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + L+ + LV LLKY L + M +
Sbjct: 54 RHPRAPGVFP----GVLHEGKARELVHLLKYEGWKALGVPMGR 92
>gi|329956624|ref|ZP_08297197.1| comF family protein [Bacteroides clarus YIT 12056]
gi|328523996|gb|EGF51072.1| comF family protein [Bacteroides clarus YIT 12056]
Length = 234
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 11/111 (9%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
T+K+ + H + C + + +C C + D
Sbjct: 3 NTLKTWFLSFLHLFFSRQCAVCGTPLQEGEEAICLKC--------NMNLPRTDYHLRTDN 54
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+ LPL + S Y S ++ LKY R DL M ++M
Sbjct: 55 PVERMFWGKLPLERATSYFFYHKGSDFRRILHQLKYGGRKDLGETMGRFMA 105
>gi|217969957|ref|YP_002355191.1| competence protein F [Thauera sp. MZ1T]
gi|217507284|gb|ACK54295.1| putative competence protein F [Thauera sp. MZ1T]
Length = 228
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 11/103 (10%), Positives = 26/103 (25%), Gaps = 1/103 (0%)
Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLP 75
+ P C + +C C ++ +T +
Sbjct: 1 MDVLAPQDCFVCGATSGGE-AVCAACADELPRRPSTACPQCGLPGLDGGRCGACRRSAPA 59
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
R+V + ++ LKY + + + + R
Sbjct: 60 FDATRAVFDFAFPVDAMIHALKYRHQLAVGRYLGDALARCGAD 102
>gi|307611175|emb|CBX00819.1| hypothetical protein LPW_25231 [Legionella pneumophila 130b]
Length = 234
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITA--TEHILKNNKDNIDKDPLKSMQKDLPLTQ 78
PSIC + ++ + +C +C + I + + D + ++K +
Sbjct: 15 PSICTLCNQFHKSQLAVCSNCMEFMKQIGSCCQYCAYPLSDDTY-LVCGQCVRKRPSFDR 73
Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + L+ KYH+ LA + Q +
Sbjct: 74 AYIAYRFEEPLRSLIHQFKYHNGLYLASFLKQLLLNA 110
>gi|229592992|ref|YP_002875111.1| hypothetical protein PFLU5616 [Pseudomonas fluorescens SBW25]
gi|229364858|emb|CAY52911.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 245
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 29/87 (33%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + C+C C +++ ++ + + ++ Q+ +
Sbjct: 21 CLVCDEATESAHCVCNACETELPWLMEHCDVCALPLPMEGLICGQCQKQPPAFKQVTAPW 80
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
Y L+ K+ R L M+A+
Sbjct: 81 TYSFPIDSLISRFKHQARWPLGQMLAR 107
>gi|206900712|ref|YP_002251126.1| hypothetical protein DICTH_1306 [Dictyoglomus thermophilum H-6-12]
gi|206739815|gb|ACI18873.1| conserved hypothetical protein [Dictyoglomus thermophilum H-6-12]
Length = 231
Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKD 73
LF ++P+ C + +C C+ K+ F + + ++
Sbjct: 9 LFEILFPTRCIFCGKY--SEGFVCKSCFEKLKF-PKNYCGMCGRPLTGSLEICYNCSKEK 65
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
V Y M ++ K+ ++ LA ++Q
Sbjct: 66 KVWDSYEFVAYYDGMWKEIIASFKFKNKPYLADFISQ 102
>gi|325282919|ref|YP_004255460.1| phosphoribosyltransferase [Deinococcus proteolyticus MRP]
gi|324314728|gb|ADY25843.1| phosphoribosyltransferase [Deinococcus proteolyticus MRP]
Length = 217
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 16/104 (15%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
+ P CP + LC HC + + PL Q
Sbjct: 10 LAHWLRLALPRACPGCGGQLGQAAGLCWHCRAGLR------------PRVERHSPLSPFQ 57
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ +T R Y VR LKY ++A ++ +
Sbjct: 58 EPHLVTLGR----YQGPVRRAVRALKYGQAREVAPVLGGLLASA 97
>gi|88608634|ref|YP_506302.1| putative competence protein F [Neorickettsia sennetsu str.
Miyayama]
gi|88600803|gb|ABD46271.1| putative competence protein F [Neorickettsia sennetsu str.
Miyayama]
Length = 270
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYS---RIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
++ +KS ++P C I S ++ C+C C +++H + H K
Sbjct: 31 TLRLIKSTFKSFLTFLFPDCCIICSSEEELVE--HCMCKPCRNEVHLLKDHLHCYCCGKK 88
Query: 61 N-IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102
+ + ++V +Y V ++ +K+HD T
Sbjct: 89 MKTSNLCITCAASKPKFNEAKAVFVYNAYVSVFMQKIKFHDGT 131
>gi|27372295|dbj|BAC53659.1| competence protein F [Serratia marcescens]
Length = 120
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + ++ +R LC C + + +Q+ P ++
Sbjct: 7 RCWLCRQPLSLMRHGLCSCCLRHLP--ARPPCCPRCGLPAGETRTPCGRCLQRPPPWQRL 64
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
V Y LV+ K+H +LA +A+ M
Sbjct: 65 VFVGDYVTPLSGLVKRFKFHRAPELAPALARLML 98
>gi|238921501|ref|YP_002935016.1| hypothetical protein NT01EI_3653 [Edwardsiella ictaluri 93-146]
gi|238871070|gb|ACR70781.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 226
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C I + +C C + +I + + + P ++ V
Sbjct: 7 RCAICLLPLRAPVGICSACRRALPAPPPCCPRCGLPSADIHHPCGRCLLRPPPWQRLTFV 66
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y LV+ LKY LA+ +A+ M
Sbjct: 67 SGYLPPLAPLVQRLKYRAEWPLAVPLARLML 97
>gi|91203265|emb|CAJ72904.1| similar to competence protein F [Candidatus Kuenenia
stuttgartiensis]
Length = 249
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 8/103 (7%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLR--FCLCGHCWSKIHFITATEHILKNNKDN 61
++ + + + L YP IC R IN +CG C I F+ I +
Sbjct: 1 MLNAINNYVQALLDVFYPRICLYCHRNINYHCEQYICGTCRKNIPFVNERHCIRCGSVLG 60
Query: 62 ID------KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
K + L + ++ Y L+ KY
Sbjct: 61 QYSVASEVKGCAFCRSEHLYHDSLTAIAYYDGAIKALIHKYKY 103
>gi|300725235|ref|YP_003714563.1| putative periplasmic gluconate-binding protein in GNT I transport
system [Xenorhabdus nematophila ATCC 19061]
gi|297631780|emb|CBJ92499.1| putative periplasmic gluconate-binding protein in GNT I transport
system [Xenorhabdus nematophila ATCC 19061]
Length = 227
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 30/78 (38%)
Query: 33 LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVL 92
+C C+ + + + + D + ++ P + ++T Y L
Sbjct: 18 AHHGICHVCYRYLKRLQSVCPRCALPSQSRDVPCGRCLKNPPPWQHLIAITDYAPPLSQL 77
Query: 93 VRLLKYHDRTDLAIMMAQ 110
+R KYH LA ++A+
Sbjct: 78 IRRYKYHSTPQLAPVLAR 95
>gi|289423614|ref|ZP_06425414.1| phosphoribosyltransferase [Peptostreptococcus anaerobius 653-L]
gi|289155982|gb|EFD04647.1| phosphoribosyltransferase [Peptostreptococcus anaerobius 653-L]
Length = 273
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 11/108 (10%)
Query: 9 KSIIIELFHCIYPS--ICPIYSRIINLR--FCLCGHCWSKIHFI-------TATEHILKN 57
K+ I + IYP C I+ + +C C+ ++ FI
Sbjct: 17 KNFIRLILDIIYPQNLSCVFCKMPISRSNKYSVCKSCYDQMVFIINACPKCGKPIINTSL 76
Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
DN D K + S Y D S LV LKY+ +T LA
Sbjct: 77 KNDNDILDCDYCRNKSTIYDRNISFLEYEDKSKHLVFDLKYNSKTFLA 124
>gi|187733952|ref|YP_001882092.1| gluconate periplasmic binding protein [Shigella boydii CDC 3083-94]
gi|187430944|gb|ACD10218.1| protein GntX [Shigella boydii CDC 3083-94]
Length = 227
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + +S+QK P ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRSLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|313200347|ref|YP_004039005.1| hypothetical protein MPQ_0587 [Methylovorus sp. MP688]
gi|312439663|gb|ADQ83769.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 213
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 20/80 (25%)
Query: 27 YSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYC 86
+ LC C + + A + + ++ Y
Sbjct: 2 CTAADGGDLGLCASCQQDLPWHKAPCCPQCALPSSQGLLCGHCLTSPPAFDHTHALLRYD 61
Query: 87 DMSCVLVRLLKYHDRTDLAI 106
+++ KY D +A
Sbjct: 62 FPLDAMLQGYKYRDMLHMAR 81
>gi|83589094|ref|YP_429103.1| phosphoribosyltransferase [Moorella thermoacetica ATCC 39073]
gi|83572008|gb|ABC18560.1| Phosphoribosyltransferase [Moorella thermoacetica ATCC 39073]
Length = 222
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Query: 34 RFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPLTQIRSVTLYCDMS 89
R C C +++ H + + + ++ P + R+V Y +
Sbjct: 3 RGLFCPQCHQELYSWQEKYHPCRYCGRLLAAGGGAVCRQCREELPPFRRARAVGAYRGIL 62
Query: 90 CVLVRLLKYHDRTDLAIMMAQ 110
L+ KY R LA + Q
Sbjct: 63 KELIWAFKYQGRRSLAAPLGQ 83
>gi|119489385|ref|ZP_01622165.1| hypothetical protein L8106_02477 [Lyngbya sp. PCC 8106]
gi|119454658|gb|EAW35804.1| hypothetical protein L8106_02477 [Lyngbya sp. PCC 8106]
Length = 228
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 19/106 (17%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+++ + + + CP+ R + + LC +C +I L K + PL
Sbjct: 2 LRNFFQAVLNLFFKPNCPLCDRPADTQ--LCPYCQKQI-----LRCQLPRGKQFSGEVPL 54
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
Q Y + +KY++ ++A + W+
Sbjct: 55 LV------WGQ------YKGALKQAIVAMKYNNHPEVAQPLGYWLA 88
>gi|302338535|ref|YP_003803741.1| phosphoribosyltransferase [Spirochaeta smaragdinae DSM 11293]
gi|301635720|gb|ADK81147.1| phosphoribosyltransferase [Spirochaeta smaragdinae DSM 11293]
Length = 250
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 19/121 (15%)
Query: 8 VKSIIIELFHCIYPSICPIYSR-----IINLRFC-------LCGHCWSKIH---FITATE 52
+ +++IE ++PS C + R I LC C ++
Sbjct: 1 MDTLLIEALQLLFPSQCLLCGRSYTPDIFPHHGGERWAPVPLCRTCLQELEQELLDQGQG 60
Query: 53 HILKNNKDNIDKD-PLKSMQKDLPLTQIRSVT---LYCDMSCVLVRLLKYHDRTDLAIMM 108
+ + +++ + + L RS T LY + L+R K+ +R DLA +
Sbjct: 61 CSICGSPLVSEQNICMSCRRHFPSLPSFRSNTPLFLYRGKAKELLRWYKFRNRRDLAPLF 120
Query: 109 A 109
A
Sbjct: 121 A 121
>gi|237711581|ref|ZP_04542062.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265753009|ref|ZP_06088578.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229454276|gb|EEO59997.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263236195|gb|EEZ21690.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 231
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 11/109 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ SI +L++ +P C + R +I+ LC C S++ T+ L+ + ++ +
Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSRLP---RTQFHLR-KDNIVECNF 56
Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ P+ + S Y L+ LKYH ++ +M + M
Sbjct: 57 WGKI----PVERATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101
>gi|320539834|ref|ZP_08039493.1| putative gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system [Serratia
symbiotica str. Tucson]
gi|320030020|gb|EFW12040.1| putative gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system [Serratia
symbiotica str. Tucson]
Length = 239
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 27/77 (35%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLL 96
LC +C + + + +Q+ P ++ + Y LV+
Sbjct: 34 LCSYCLRHLLAKPLCYPCCALPAGSPLLPCGRCLQQPPPWQRLVFASDYITPLSQLVKRF 93
Query: 97 KYHDRTDLAIMMAQWMF 113
K+ +LA +A+ M
Sbjct: 94 KFQHAPELAPTLARLML 110
>gi|212695382|ref|ZP_03303510.1| hypothetical protein BACDOR_04931 [Bacteroides dorei DSM 17855]
gi|212662017|gb|EEB22591.1| hypothetical protein BACDOR_04931 [Bacteroides dorei DSM 17855]
Length = 104
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 11/109 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ SI +L++ +P C + R +I+ LC C S++ T+ L+ + ++ +
Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSRLP---RTQFHLR-KDNIVECNF 56
Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ P+ + S Y L+ LKYH ++ +M + M
Sbjct: 57 WGKI----PVERATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101
>gi|261409648|ref|YP_003245889.1| amidophosphoribosyltransferase-like protein [Paenibacillus sp.
Y412MC10]
gi|261286111|gb|ACX68082.1| amidophosphoribosyltransferase-like protein [Paenibacillus sp.
Y412MC10]
Length = 274
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 28/96 (29%), Gaps = 4/96 (4%)
Query: 23 ICPIYSRIINLRF---CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
IC + + +C C+ +I +I + D + +
Sbjct: 11 ICLTCGKTGSCNQELPGICHACYRQIPWIFKPRCLRCGRGIGC-PDCTRLGVNNRSFVLN 69
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
RS Y + KY A ++ + + R
Sbjct: 70 RSAVTYDAQMREWLAQYKYRGNERYAPLLVEMLLRA 105
>gi|124268368|ref|YP_001022372.1| putative phosphoribosyl transferase [Methylibium petroleiphilum
PM1]
gi|124261143|gb|ABM96137.1| putative phosphoribosyl transferase [Methylibium petroleiphilum
PM1]
Length = 230
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 5/101 (4%)
Query: 20 YPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPL 76
+P+ C + +C C F + D ++ P
Sbjct: 5 WPNRCAVCHAGTRGAAARICDDC--LTRFAPNVPRCERCALQRPDGVTVCGSCLRNPPPW 62
Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
++ Y L+ LK+HD DLA +AQ + L+
Sbjct: 63 SRAVVACDYAYPWDGLLNALKFHDAIDLAAPLAQRLALALQ 103
>gi|281180445|dbj|BAI56775.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 227
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK LP ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPLPWQRLLTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|331654991|ref|ZP_08355990.1| protein GntX [Escherichia coli M718]
gi|331047006|gb|EGI19084.1| protein GntX [Escherichia coli M718]
Length = 243
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK P ++ +V
Sbjct: 38 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y +L+ LK+ R+++
Sbjct: 84 ADYAPPLSLLIYQLKFSRRSEI 105
>gi|187922548|ref|YP_001894190.1| phosphoribosyltransferase [Burkholderia phytofirmans PsJN]
gi|187713742|gb|ACD14966.1| phosphoribosyltransferase [Burkholderia phytofirmans PsJN]
Length = 261
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 11/113 (9%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHFITATEHILKNNKDNIDKD---- 65
+ H P++C + + LC C W++ + T + +
Sbjct: 27 RVVHAALPNLCALCGNL--SHTTLCAGCDAAYWNESR-MRCTVCAVPLSSSRWAAHSQYR 83
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ + P ++ Y +L LK+ R LA AQ + R+ +
Sbjct: 84 CADCIGEPPPFDATFALADYRAPLDMLAVGLKFRARLMLAREFAQRLARLAQD 136
>gi|227546169|ref|ZP_03976218.1| phosphoribosyltransferase [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239621789|ref|ZP_04664820.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|227213150|gb|EEI81022.1| phosphoribosyltransferase [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239514980|gb|EEQ54847.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 240
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 21/112 (18%)
Query: 2 PAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61
P++ + ++ ++ + ++P C LC CW
Sbjct: 4 PSVYKWWHAMWAQVCNLLFPRGCAGCDAP---DEVLCAACW------------------A 42
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + +I S ++Y + K HD T+L + M
Sbjct: 43 LFAQCRERDADSGGGARIWSASIYQGAVRRAILDWKDHDDTELDGPFGRIMV 94
>gi|218691689|ref|YP_002399901.1| gluconate periplasmic binding protein [Escherichia coli ED1a]
gi|306816249|ref|ZP_07450387.1| gluconate periplasmic binding protein [Escherichia coli NC101]
gi|218429253|emb|CAR10064.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Escherichia coli ED1a]
gi|305850645|gb|EFM51102.1| gluconate periplasmic binding protein [Escherichia coli NC101]
gi|320197372|gb|EFW71987.1| gluconate periplasmic binding protein [Escherichia coli WV_060327]
Length = 227
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK LP ++ +V
Sbjct: 22 ICSVCSRAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPLPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|254881267|ref|ZP_05253977.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254834060|gb|EET14369.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 231
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ SI +L++ +P C + R +I+ LC C S + T+ L+ + ++
Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSGLP---RTQFHLR-KDNIVECKF 56
Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ P+ S Y L+ LKYH ++ +M + M
Sbjct: 57 WGKI----PVEHATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101
>gi|291615045|ref|YP_003525202.1| phosphoribosyltransferase [Sideroxydans lithotrophicus ES-1]
gi|291585157|gb|ADE12815.1| phosphoribosyltransferase [Sideroxydans lithotrophicus ES-1]
Length = 238
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 1/86 (1%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + C C +++ + A + +Q+ +
Sbjct: 24 CLLCGAA-SHVGLCCAACDTELPRLNAEHCPICALPTPSGSVCGACLQQPPAFDHTVAAF 82
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMA 109
Y L+R LK+H+ L +A
Sbjct: 83 SYDFPVDKLIRALKFHEHLALVNHLA 108
>gi|254494988|ref|ZP_01053158.2| predicted amidophosphoribosyl-transferase [Polaribacter sp. MED152]
gi|213690570|gb|EAQ42586.2| predicted amidophosphoribosyl-transferase [Polaribacter sp. MED152]
Length = 228
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 10 SIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
I+ +L + YP +C + ++++ +C C + L N + + K
Sbjct: 2 KILKDLLYLFYPKLCAVCELKLVDNETTICTLCRHDL--------PLTNFTNFRENKVTK 53
Query: 69 SMQKDLPLTQIRSVTLY--CDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ + + ++ Y + L++ LKY + ++ + W+
Sbjct: 54 TFYGRTLIHKGYALLFYRKKGSTRKLIQQLKYRNNEEIGVFFGNWL 99
>gi|147679091|ref|YP_001213306.1| amidophosphoribosyltransferases [Pelotomaculum thermopropionicum
SI]
gi|146275188|dbj|BAF60937.1| predicted amidophosphoribosyltransferases [Pelotomaculum
thermopropionicum SI]
Length = 246
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 19/107 (17%)
Query: 10 SIIIELFHCIYPSI--CPIYSRIINLRFCLCGHCWSKIHFITATE----------HILKN 57
++ +L + I+P CP R CG+C + ++ K
Sbjct: 3 ALWNDLLNLIFPPAPECPFCGRP-GPPGKACGNC---LAYLEGFRREAHCSRCGRLPGKG 58
Query: 58 NKDNIDKD---PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101
+ ++ P +R+ Y + + KY R
Sbjct: 59 AALFGRGGTRLCGECRAREWPFALVRAAGPYEGIIKEAIHRFKYAGR 105
>gi|294777683|ref|ZP_06743134.1| ComF family protein [Bacteroides vulgatus PC510]
gi|319640269|ref|ZP_07994994.1| amidophosphoribosyl-transferase [Bacteroides sp. 3_1_40A]
gi|294448751|gb|EFG17300.1| ComF family protein [Bacteroides vulgatus PC510]
gi|317388044|gb|EFV68898.1| amidophosphoribosyl-transferase [Bacteroides sp. 3_1_40A]
Length = 231
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ SI +L++ +P C + R +I+ LC C S + T+ L+ + ++ +
Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSGLP---RTQFHLR-KDNIVECNF 56
Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ P+ S Y L+ LKYH ++ +M + M
Sbjct: 57 WGKI----PVEHATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101
>gi|317472164|ref|ZP_07931496.1| comF family protein [Anaerostipes sp. 3_2_56FAA]
gi|316900568|gb|EFV22550.1| comF family protein [Anaerostipes sp. 3_2_56FAA]
Length = 234
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 15 LFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQ 71
++P CPI ++ N + +C C+ K+ F+ ++ +
Sbjct: 5 FLSFLFPRRCPICHHLLKNQQSLICPKCYQKVVFVREPACFCCGKPLENEETELCSDCRK 64
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107
+ + +Y + + +KY ++ + A
Sbjct: 65 HPKTFKKGIPLCVYNNEVRDSLAAIKYQNQKEYADF 100
>gi|296107921|ref|YP_003619622.1| competence protein ComF [Legionella pneumophila 2300/99 Alcoy]
gi|295649823|gb|ADG25670.1| competence protein ComF [Legionella pneumophila 2300/99 Alcoy]
Length = 234
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 9/93 (9%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKDLP 75
PSIC + ++ + +C +C I F+ + D + ++K
Sbjct: 15 PSICTLCNQFHKSQLAVCSNC---IEFMKQLGSCCQYCAYPLSDDTY-LVCGQCVRKRPS 70
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM 108
+ + + L+ KYH+ LA +
Sbjct: 71 FDRAYIAYRFEEPLRNLIHQFKYHNGLYLASFL 103
>gi|322690809|ref|YP_004220379.1| hypothetical protein BLLJ_0619 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320455665|dbj|BAJ66287.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 240
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 21/112 (18%)
Query: 2 PAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61
P++ + ++ ++ + ++P C LC CW
Sbjct: 4 PSVYKWWHAMWAQVCNLLFPRGCAGCDAP---DEVLCAACW------------------A 42
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + +I S ++Y + K HD T+L + M
Sbjct: 43 LFAQCRERDADSGGGARIWSASIYQGAVRRAILDWKDHDDTELDGPFGRIMV 94
>gi|262382451|ref|ZP_06075588.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295329|gb|EEY83260.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 229
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 11/103 (10%)
Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHIL--KNNKDNIDKDPLKSMQ 71
L + +P++C I R ++ +C C + T + I KD ++
Sbjct: 8 LLNLFFPNLCKICKRPLVEGEEQICLKCLCDLPH-TGYHRQANNPVEQLFIGKDRIEYAT 66
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
L + L+ LKYHD +L ++ + + R
Sbjct: 67 AYLRYEKG-------GKVQSLIHSLKYHDNKELGYLLGRQIAR 102
>gi|212711653|ref|ZP_03319781.1| hypothetical protein PROVALCAL_02728 [Providencia alcalifaciens DSM
30120]
gi|212685755|gb|EEB45283.1| hypothetical protein PROVALCAL_02728 [Providencia alcalifaciens DSM
30120]
Length = 227
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 23 ICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81
+C + + + + +C C + + + ID + + + P ++ +
Sbjct: 7 VCWLCQQELKVPRQGICSFCTKNLPPMPRVCPQCALTSEYIDASCGRCLLQPPPWQKLIT 66
Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
V+ Y L+ K+H + LA+ + +
Sbjct: 67 VSPYRAPLRQLIHQYKFHRQPQLAVALTR 95
>gi|308273050|emb|CBX29654.1| hypothetical protein N47_J06350 [uncultured Desulfobacterium sp.]
Length = 276
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 31/125 (24%), Gaps = 34/125 (27%)
Query: 17 HCIYPSICPIYS-----------------------------RIINLRFCLCGHCWSKIHF 47
++PS C + + F LC C
Sbjct: 12 KAVFPSKCIVCGSFFHVFSENDPVHQKNYSDKKYEIENITFERVMSPF-LCSSCLVDYLP 70
Query: 48 ITATEHILKNNKD----NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
+ + D K ++ + RSV LY ++ KY +
Sbjct: 71 VESPFCSSCGIVFKSREGTDHICQKCIEHPKRFGKARSVFLYSKSVMEVIHSFKYKGKLQ 130
Query: 104 LAIMM 108
LA +
Sbjct: 131 LADPL 135
>gi|320458782|dbj|BAJ69403.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 240
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 21/112 (18%)
Query: 2 PAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61
P++ + + + + ++P C LC CW
Sbjct: 4 PSVYKWWHVMWAQACNLLFPRGCAGCDAP---DEVLCAACW------------------A 42
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + +I S ++Y + + K HD T+L + M
Sbjct: 43 LFAQCRERDADSGGGARIWSASIYQGAARRAILDWKDHDDTELDGPFGRIMV 94
>gi|166079864|gb|ABY81652.1| ComF [Serratia sp. SES-01]
Length = 135
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 5/91 (5%)
Query: 23 ICPIYSRIINLRF-CLCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + + L +C +C + + + +Q+ P +
Sbjct: 7 RCWLCRQSLRLHGQGICSYCLRHMP--AKPLCCPRCGLPAGDARLPCGRCLQQPPPWQAL 64
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
V Y L++ K+ +LA ++A+
Sbjct: 65 VFVNDYAAPLRQLIKKFKFQHTPELAPLLAR 95
>gi|206579882|ref|YP_002236214.1| protein GntX [Klebsiella pneumoniae 342]
gi|206568940|gb|ACI10716.1| protein GntX [Klebsiella pneumoniae 342]
Length = 224
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPL-KSMQKDLPLTQIRSVTLYCDMSCVLVR 94
+C C + + P + +QK P ++ +V Y LV+
Sbjct: 21 GICSRCSRAL-LACPPLCPRCGLPAALSHHPCGRCLQKPPPWHRLVAVNDYRPPLSGLVQ 79
Query: 95 LLKYHDRTDLAI 106
LK+H R +L
Sbjct: 80 QLKFHHRPELGP 91
>gi|323182874|gb|EFZ68275.1| protein gntX [Escherichia coli 1357]
Length = 215
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + SR LC C + + +QK ++ +V
Sbjct: 10 ICSVCSRATRTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPLWQRLVTV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 56 ADYAPPLSPLIHQLKFSRRSEI 77
>gi|170681819|ref|YP_001745661.1| gluconate periplasmic binding protein [Escherichia coli SMS-3-5]
gi|170519537|gb|ACB17715.1| protein GntX [Escherichia coli SMS-3-5]
Length = 227
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + S LC C + + +QK P ++ +V
Sbjct: 22 ICSVCSLAARTDKTLCPQC--------------GLPATHSHLPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y L+ LK+ R+++
Sbjct: 68 ADYAPPLSPLIHQLKFSRRSEI 89
>gi|256839097|ref|ZP_05544607.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256740016|gb|EEU53340.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 229
Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 11/103 (10%)
Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATE--HILKNNKDNIDKDPLKSMQ 71
L + +P++C I R ++ +C C + T + I KD ++
Sbjct: 8 LLNLFFPNLCKICKRPLVEGEEQICLKCLCDLPH-TGYHQQVNNPVEQLFIGKDRIEYAT 66
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
L + L+ LKYHD +L ++ + + R
Sbjct: 67 AYLRYEKG-------GKVQCLIHSLKYHDNKELGYLLGRQIAR 102
>gi|150010263|ref|YP_001305006.1| putative amidophosphoribosyl-transferase [Parabacteroides
distasonis ATCC 8503]
gi|255012468|ref|ZP_05284594.1| putative amidophosphoribosyl-transferase [Bacteroides sp. 2_1_7]
gi|298374642|ref|ZP_06984600.1| competence protein F-related protein [Bacteroides sp. 3_1_19]
gi|149938687|gb|ABR45384.1| putative amidophosphoribosyl-transferase [Parabacteroides
distasonis ATCC 8503]
gi|298269010|gb|EFI10665.1| competence protein F-related protein [Bacteroides sp. 3_1_19]
Length = 229
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 11/103 (10%)
Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
L + +P++C I R ++ +C C + + +
Sbjct: 8 LLNLFFPNLCKICKRPLVEGEEQICLKCLCDL--------PHTGYHQQANNPVEQLFIGK 59
Query: 74 LPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ + Y L+ LKYHD +L ++ + + R
Sbjct: 60 NRIEYATAYLRYEKGGKVQSLIHSLKYHDNKELGYLLGRQIAR 102
>gi|226942752|ref|YP_002797825.1| amidophosphoribosyltransferase [Azotobacter vinelandii DJ]
gi|226717679|gb|ACO76850.1| amidophosphoribosyltransferase [Azotobacter vinelandii DJ]
Length = 238
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + LC C +++ ++ A I D ++ ++ +
Sbjct: 14 CLLCDEPAETGLPLCASCEAELPWLGAHCAICALPLPAADLVCGACQKRPPAFDRVEAPW 73
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
Y L+ K+ R L ++ + + R
Sbjct: 74 RYAFPVDTLIARFKHQARWPLGRLLGELLAR 104
>gi|28197986|ref|NP_778300.1| competence protein F [Xylella fastidiosa Temecula1]
gi|182680612|ref|YP_001828772.1| competence protein F [Xylella fastidiosa M23]
gi|28056046|gb|AAO27949.1| competence protein F [Xylella fastidiosa Temecula1]
gi|182630722|gb|ACB91498.1| competence protein F [Xylella fastidiosa M23]
gi|307579071|gb|ADN63040.1| competence protein F [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 241
Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 31/107 (28%), Gaps = 3/107 (2%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPLKSM 70
L + PS C + + LC C + + + I +
Sbjct: 18 RLLRWLLPSYCLACNEPGHQGKTLCATCQLLLPRMENACLRCAAPLKELEGIHPTCGPCL 77
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
PL + LY L+ K+H + ++A M +
Sbjct: 78 YDPPPLETAHAAFLYHWPINKLISRFKFHQDLECGHLLADNMAMAAQ 124
>gi|282857327|ref|ZP_06266564.1| phosphoribosyltransferase [Pyramidobacter piscolens W5455]
gi|282584827|gb|EFB90158.1| phosphoribosyltransferase [Pyramidobacter piscolens W5455]
Length = 226
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
++ L H + P CP+ ++ + LC C K I+A E L + P +
Sbjct: 5 PVVELLGHLLMPESCPVCGKLASP---LCPECLGK---ISAPEPPLPHCLRCGGASPCE- 57
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ R++TL+ + L+ +KY A M + R
Sbjct: 58 -RHGRRYE-ARALTLHKGEARELLLTVKYGGSGVAAQKMGAALAR 100
>gi|167464398|ref|ZP_02329487.1| ComFC [Paenibacillus larvae subsp. larvae BRL-230010]
gi|322382404|ref|ZP_08056307.1| DNA transport apparatus-associated-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321153621|gb|EFX46000.1| DNA transport apparatus-associated-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 261
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 10/97 (10%)
Query: 9 KSIIIELFHCIYP--SICPIYSRII---NLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
K ++ + P S CP ++ + LC C++ I +I + +
Sbjct: 14 KKVLSAAQGLLSPRVSACPGCNQPAVLNTRQMGLCQICYTGIPWIREVICPICGRYE--- 70
Query: 64 KDPLKSMQKDLP-LTQIRSVTLYCDMSCVLVRLLKYH 99
+ ++++ + RS Y + L+ KY
Sbjct: 71 -ECGDCLRREETCFIRNRSAVRYDESMKELLARYKYR 106
>gi|269140628|ref|YP_003297329.1| putative competence-related protein F [Edwardsiella tarda EIB202]
gi|267986289|gb|ACY86118.1| putative competence-related protein F [Edwardsiella tarda EIB202]
gi|304560414|gb|ADM43078.1| conserved hypothetical protein [Edwardsiella tarda FL6-60]
Length = 226
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 30/91 (32%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C I + +C C + + + + + + ++ V
Sbjct: 7 RCAICRLPLRAPVGICSACRRALPIPPPCCPRCGLPSADTQRPCGRCLLRPPLWQRLTFV 66
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y LV+ LKY LA+ +A+ M
Sbjct: 67 SDYLPPLAPLVQRLKYRAEWPLAVPLARLML 97
>gi|306820763|ref|ZP_07454389.1| phosphoribosyl transferase, competence protein [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304551212|gb|EFM39177.1| phosphoribosyl transferase, competence protein [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 222
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 18 CIYPSI--CPIYSRIINLR--FCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
++P C + I+ F LC +C+ I F L + DK+ ++ ++ D
Sbjct: 3 ILFPENIYCISCNEPISDSNKFSLCKNCYENIEF-------LYDKNTIFDKEVMELLKND 55
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
++++ T+Y D+ ++ +KY ++T LA A M
Sbjct: 56 Y-ISKVHITTIYNDIMKNMIHGIKYSNKTYLAKFFASMM 93
>gi|113474722|ref|YP_720783.1| hypothetical protein Tery_0911 [Trichodesmium erythraeum IMS101]
gi|110165770|gb|ABG50310.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 255
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 18/105 (17%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
+ I + + + CP+ R + F C +C ++ + +
Sbjct: 7 RKIFKPFLNILLKANCPLCQRSADREF--CQYCEKQV-----WHCQFPGGGEIFSGEVPI 59
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Q Y D + +KY D ++A + W+
Sbjct: 60 FV-----WGQ------YKDSLKRAIAAMKYEDHPEIAKPLGYWLA 93
>gi|108759781|ref|YP_629494.1| ComF domain-containing protein [Myxococcus xanthus DK 1622]
gi|108463661|gb|ABF88846.1| ComF domain protein [Myxococcus xanthus DK 1622]
Length = 92
Score = 43.8 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKD-PLK 68
++ L +YP C ++++ C C + + + + +
Sbjct: 1 MLKALLDVLYPPSCLACTKVLPGPEGFFCETCDTAVERLPPACCRTCAEPGAFPGETCPR 60
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
P T+ + + + KY
Sbjct: 61 CRATPPPFTRAWAPFAHEGPLARAIHRFKY 90
>gi|295675361|ref|YP_003603885.1| phosphoribosyltransferase [Burkholderia sp. CCGE1002]
gi|295435204|gb|ADG14374.1| phosphoribosyltransferase [Burkholderia sp. CCGE1002]
Length = 261
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 9/122 (7%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILK 56
+ + + S + P++C + + LC C W++ + A
Sbjct: 17 VARGLYSAWPRALNVALPNLCALCGNM--SHKTLCDGCDAAYWNESRLRCSVCAVPLPAS 74
Query: 57 NNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
+ + P ++ Y L LK+ R LA AQ + R+
Sbjct: 75 RWVAQAGYRCADCVAEPPPFDASFALADYRAPLDTLAVGLKFRARLMLARDFAQRLARLA 134
Query: 117 EK 118
Sbjct: 135 RD 136
>gi|294675033|ref|YP_003575649.1| ComF family protein [Prevotella ruminicola 23]
gi|294473458|gb|ADE82847.1| ComF family protein [Prevotella ruminicola 23]
Length = 232
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 22/118 (18%)
Query: 10 SIIIELFHCIYPSICPIYSRIINL-RFCLCGHCWSKIHF-ITATEHILKNNKDNIDKDPL 67
SI L I P C I R ++ LC C HF + T L D +
Sbjct: 5 SIWRRLLDFISPRTCVICGRRLSATEEVLCMKC----HFHLPRTGFWLDP----YDNEMA 56
Query: 68 KSMQKDLPLTQIRSVT-----LYCDMSCVLVRLLKYHDRTD----LAIMMAQWMFRVL 116
KS +P+ R+ + D + ++ LKY D + L M+A+ M
Sbjct: 57 KSFWHLIPIE--RAAAYFYYEAHSDTA-NMIYQLKYKDHPEVGVILGRMLAKEMQGAG 111
>gi|54026581|ref|YP_120823.1| hypothetical protein nfa46080 [Nocardia farcinica IFM 10152]
gi|54018089|dbj|BAD59459.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 214
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 31/108 (28%), Gaps = 20/108 (18%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
+ L + P C R G W + PL+
Sbjct: 1 MRTLLDLVLPVACGGCGRP--------GTPW------------CDACATALAGPPLRLRP 40
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ P +V Y + V LK RTDLA + M L ++
Sbjct: 41 RTDPGVPCWAVARYAGPARRAVLALKERGRTDLAAPLGHAMAGALRRL 88
>gi|150003434|ref|YP_001298178.1| putative amidophosphoribosyl-transferase [Bacteroides vulgatus ATCC
8482]
gi|149931858|gb|ABR38556.1| putative amidophosphoribosyl-transferase [Bacteroides vulgatus ATCC
8482]
Length = 231
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ SI +L++ +P C + R +I+ LC C S + T+ L+ + ++ +
Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLRCLSGLP---RTQFHLR-KDNIVECNF 56
Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ P+ S Y L+ LKYH ++ +M + M
Sbjct: 57 WGKI----PVEHATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101
>gi|294638122|ref|ZP_06716378.1| competence protein F [Edwardsiella tarda ATCC 23685]
gi|291088689|gb|EFE21250.1| competence protein F [Edwardsiella tarda ATCC 23685]
Length = 226
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 28/91 (30%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C I + +C C + + + + +Q+ P ++
Sbjct: 7 RCAICRLPLRAPVGICTPCRRALPLPPPCCPRCGLPSADATRPCGRCLQRPPPWQRLIFT 66
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
Y L++ KY LA +A+ M
Sbjct: 67 GDYQPPLATLIQRFKYRGEWPLAFPLARLML 97
>gi|325923495|ref|ZP_08185148.1| putative amidophosphoribosyltransferase [Xanthomonas gardneri ATCC
19865]
gi|325546023|gb|EGD17224.1| putative amidophosphoribosyltransferase [Xanthomonas gardneri ATCC
19865]
Length = 241
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 4/110 (3%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---PLKS 69
+ + PS+C + + LC C + + + + +
Sbjct: 18 QRVLRLLLPSVCLVCAEAGTADCDLCPACRAALP-DHGHACLCCATQLYVSDGALRCGHC 76
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+Q PL ++ + Y L+R K+H ++++ M + +
Sbjct: 77 LQHPPPLQRVHACFTYRWPVDGLLRRFKFHQDLPAGRLLSELMAKRCADL 126
>gi|237725966|ref|ZP_04556447.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229435774|gb|EEO45851.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 231
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ SI +L++ +P C + R +I+ LC C S++ T+ L+ + ++ +
Sbjct: 1 MMSIWTDLWNLFFPHSCLLCGRQLISGERVLCLKCLSRLP---RTQFHLR-KDNIVECNF 56
Query: 67 LKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ P+ S Y L+ LKYH ++ +M + M
Sbjct: 57 WGKI----PVEHATSFLYYAKGGNVRQLLYELKYHGNQEVGEVMGRMMA 101
>gi|269836555|ref|YP_003318783.1| phosphoribosyltransferase [Sphaerobacter thermophilus DSM 20745]
gi|269785818|gb|ACZ37961.1| phosphoribosyltransferase [Sphaerobacter thermophilus DSM 20745]
Length = 235
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 30/99 (30%), Gaps = 4/99 (4%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
M + + V+ + L + P +C R LC C + + +T
Sbjct: 2 MSSPLAWVRRLTRALEATLLPPVCGGCGRRGEW---LCPSCTAALRPLTDARCRC-GRPG 57
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + L IR+ ++ + KY
Sbjct: 58 TRGRVCSVCAEWPDALGPIRAAFVFEGPLRSSIHRFKYR 96
>gi|262045249|ref|ZP_06018275.1| GNTI system gluconate periplasmic binding protein with
phosphoribosyltransferase domain [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259037459|gb|EEW38704.1| GNTI system gluconate periplasmic binding protein with
phosphoribosyltransferase domain [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 212
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 14/84 (16%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC SR + LC C + +QK P ++ +V
Sbjct: 10 ICSRCSRALLACPPLCPQC--------------GLPAAASRPPCGRCLQKPPPWHRLVAV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106
Y LV+ LK+H R +L
Sbjct: 56 NDYRPPLSGLVQQLKFHHRPELGP 79
>gi|213692632|ref|YP_002323218.1| phosphoribosyltransferase [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|213524093|gb|ACJ52840.1| phosphoribosyltransferase [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 228
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 21/101 (20%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
+ + ++P C LC CW + +
Sbjct: 3 AQACNLLFPRGCAGCDAP---DEVLCAACW------------------ALFAQCRERDAD 41
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+I S ++Y + + K HD T+L + M
Sbjct: 42 SGGGARIWSASIYQGAARRAILDWKDHDDTELDGPFGRIMV 82
>gi|300870576|ref|YP_003785447.1| putative phosphoribosyltransferace [Brachyspira pilosicoli 95/1000]
gi|300688275|gb|ADK30946.1| putative phosphoribosyltransferace [Brachyspira pilosicoli 95/1000]
Length = 243
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATE---HILKNNKDNI 62
+K +F+ ++P+ C I II +C C +K+ +I + +
Sbjct: 2 LKKFFAVVFNILFPNHCIICKNIIQSDKINYICLDCINKLSYIHRDDYIRCNRCGRIIDT 61
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101
+++ + +S+ Y D + L+ +K+ R
Sbjct: 62 KDSTCICSYENIYFDECKSMLYYDDKTSNLIHKMKFSHR 100
>gi|237810690|ref|YP_002895141.1| ComF family protein [Burkholderia pseudomallei MSHR346]
gi|237505062|gb|ACQ97380.1| ComF family protein [Burkholderia pseudomallei MSHR346]
Length = 255
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 34/123 (27%), Gaps = 7/123 (5%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55
+ A+ ++ P+ C + + +C C W++ L
Sbjct: 11 IRAMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + + P ++ Y L LK+ + L + + R+
Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128
Query: 116 LEK 118
Sbjct: 129 AAD 131
>gi|307243841|ref|ZP_07525970.1| ComF family protein [Peptostreptococcus stomatis DSM 17678]
gi|306492779|gb|EFM64803.1| ComF family protein [Peptostreptococcus stomatis DSM 17678]
Length = 256
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 11/115 (9%)
Query: 10 SIIIELFHCIYPSI--CPIYSRIINL--RFCLCGHCWSKIHFI-------TATEHILKNN 58
I + IYP C I+ R+ +C C KI FI
Sbjct: 4 KIWKYILDIIYPQNLNCIFCEMPISRSNRYSMCKKCLEKIIFIHNSCDYCGKPTINTSLE 63
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
D + K+ + S Y D+S ++V LKY +T +A ++A M
Sbjct: 64 VDRPVEKCPYCQGKNFLFDRNISFIEYGDLSKLMVFKLKYSGKTYMAKIIANIMA 118
>gi|253575859|ref|ZP_04853193.1| amidophosphoribosyltransferase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844653|gb|EES72667.1| amidophosphoribosyltransferase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 314
Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 7/88 (7%)
Query: 18 CIYPSI--CPIYSRIIN----LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
+ P C + I+ +C C+ I +I + + D ++ Q
Sbjct: 1 MLAPPAIPCLTCGKTISERVRGYPEICLSCYLSIPWIKSPRCRICGRPMGC-PDCTRTGQ 59
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
RS +Y + + KY
Sbjct: 60 APRSFVMNRSAVIYSPLMREWLAQYKYR 87
>gi|237728732|ref|ZP_04559213.1| gluconate periplasmic binding protein [Citrobacter sp. 30_2]
gi|226909354|gb|EEH95272.1| gluconate periplasmic binding protein [Citrobacter sp. 30_2]
Length = 227
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 14/81 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R LC C + + +QK P ++ +V
Sbjct: 22 ICSVCTRATRQHASLCPQC--------------GLPAAHTVIPCGRCLQKPPPWQRLVTV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTD 103
+ Y L+ LK+ R++
Sbjct: 68 SDYVPPLSGLIHQLKFSRRSE 88
>gi|238896880|ref|YP_002921625.1| putative periplasmic gluconate-binding protein in GNT I transport
system [Klebsiella pneumoniae NTUH-K2044]
gi|238549207|dbj|BAH65558.1| putative periplasmic gluconate-binding protein in GNT I transport
system [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 224
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 1/84 (1%)
Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + + R+ +C C + + +QK P ++ +V
Sbjct: 8 CWLCQMPLAVARWGICSRCSRALLACPPLCPQCGLPAAASRHPCGRCLQKPPPWHRLVAV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106
Y LV+ LK+H R +L
Sbjct: 68 NDYRPPLSGLVQQLKFHHRPELGP 91
>gi|282859873|ref|ZP_06268961.1| ComF family protein [Prevotella bivia JCVIHMP010]
gi|282587276|gb|EFB92493.1| ComF family protein [Prevotella bivia JCVIHMP010]
Length = 234
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 10/94 (10%)
Query: 14 ELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
+F I P C I + ++ +C C +H H+ D + +
Sbjct: 10 SIFDIIAPRACTICGKRLSLSEAVICATC--NLHLNRTNYHLSP-----YDNELARCFWG 62
Query: 73 DLPLTQIRSVTLYCDMSC--VLVRLLKYHDRTDL 104
+P+ + + Y + +V LKY +R D+
Sbjct: 63 KIPIERCAAYLFYQHHTQSSKMVYALKYGNRPDI 96
>gi|288574705|ref|ZP_06393062.1| phosphoribosyltransferase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570446|gb|EFC92003.1| phosphoribosyltransferase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 225
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 11/101 (10%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
H ++P CP+ ++ + LC C ++ ++
Sbjct: 7 FLHFLWPVSCPVCGKLAS---VLCRSCSDELVRDNPLRCLVCGEDIPCHLHGHSYPSV-- 61
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
S ++ M+ LV +KYH + + +M + +
Sbjct: 62 ------SGAVHSGMARELVLSMKYHGVSGMGRIMGRSLGSA 96
>gi|289163908|ref|YP_003454046.1| competence protein ComF [Legionella longbeachae NSW150]
gi|288857081|emb|CBJ10896.1| competence protein ComF [Legionella longbeachae NSW150]
Length = 234
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFIT-ATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81
IC + + N + +C HC + + H D ++ +
Sbjct: 17 ICILCKQYHNDKMAVCSHCIELMPLLGPGCHHCAYPLPDTQFLVCGHCIKNPPSFDRAFI 76
Query: 82 VTLYCDMSCVLVRLLKYH 99
+ + L+ KYH
Sbjct: 77 KYTFEEPLRTLLHQFKYH 94
>gi|254497861|ref|ZP_05110627.1| competence protein ComF [Legionella drancourtii LLAP12]
gi|254352939|gb|EET11708.1| competence protein ComF [Legionella drancourtii LLAP12]
Length = 253
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK--NNKDNIDKDPLKSMQKDLPLTQ 78
PSIC + ++ +C C + + + D + ++K +
Sbjct: 32 PSICTLCNQFHKGILAVCEPCIALLPQL-GPACQYCAYPLPDMAYLICGRCIKKPPHFDR 90
Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW-MFRVLEKI 119
+ + L+ KYH+ L ++ M ++
Sbjct: 91 TFIAYKFEEPLRTLLHRFKYHNGLYLTSFLSHLIMSSAQRQL 132
>gi|313206314|ref|YP_004045491.1| phosphoribosyltransferase [Riemerella anatipestifer DSM 15868]
gi|312445630|gb|ADQ81985.1| phosphoribosyltransferase [Riemerella anatipestifer DSM 15868]
gi|315023180|gb|EFT36191.1| competence protein [Riemerella anatipestifer RA-YM]
gi|325336241|gb|ADZ12515.1| phosphoribosyltransferase [Riemerella anatipestifer RA-GD]
Length = 217
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 10/100 (10%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
P+ C + II+ +C C S I+F T + D K +
Sbjct: 2 FLDFFLPNRCLKCNLIISSDEIVCWACKSHINF---TYNDFGGKGDFYQK-----VVLKF 53
Query: 75 PLTQIRSVTLY--CDMSCVLVRLLKYHDRTDLAIMMAQWM 112
P+ + S+ Y ++S ++ LKYH + ++A W+
Sbjct: 54 PVNKAFSLMKYEKKELSQDIIHALKYHSMERVGKVLAHWV 93
>gi|78486316|ref|YP_392241.1| hypothetical protein Tcr_1977 [Thiomicrospira crunogena XCL-2]
gi|78364602|gb|ABB42567.1| conserved hypothetical protein [Thiomicrospira crunogena XCL-2]
Length = 231
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 38/107 (35%), Gaps = 13/107 (12%)
Query: 14 ELFHCIYPSICPIYSRIINLRFC---LCGHCWSKIHFITATE--HILKNNKDNIDKDPLK 68
++P +C + + L K+ + + K + + +
Sbjct: 3 RFEKWLFPPVCA----LTEKKGASVDLAPELLEKM---VRPDRCCPVCAEKMSKTQICGR 55
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ-WMFR 114
+ + ++ Y ++ L++ LK+H + ++ ++ WM +
Sbjct: 56 CLANVPAFYRTQAAFYYESVAQDLIQSLKFHQQLHISRLLVDLWMEK 102
>gi|255065466|ref|ZP_05317321.1| ComF/gntX family protein [Neisseria sicca ATCC 29256]
gi|255050291|gb|EET45755.1| ComF/gntX family protein [Neisseria sicca ATCC 29256]
Length = 268
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 8/100 (8%)
Query: 23 ICPIYSRIINL-----RFCLCGHCWSKIH-FIT--ATEHILKNNKDNIDKDPLKSMQKDL 74
C + +++ C C + + F T A L +K
Sbjct: 22 RCVLCHALVSACETRPYGGFCDGCAADLEEFFTDAANSCPLCFRPIQGGAVCGGCQKKPP 81
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
++ + Y ++R LK+ ++ +A+ M R
Sbjct: 82 AFERMWASLYYEPPVSSMIRALKHLADLGMSRPLAELMRR 121
>gi|295085502|emb|CBK67025.1| Predicted amidophosphoribosyltransferases [Bacteroides
xylanisolvens XB1A]
Length = 235
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ ++P C + R + C+C C N D +
Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTEC--------NINLPRTNYHLRKDNPVERLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+PL + S Y S +++ LKY + ++ +M ++M
Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107
>gi|153805846|ref|ZP_01958514.1| hypothetical protein BACCAC_00083 [Bacteroides caccae ATCC 43185]
gi|149130523|gb|EDM21729.1| hypothetical protein BACCAC_00083 [Bacteroides caccae ATCC 43185]
Length = 237
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
++P C + R + C+C C + T++ L D
Sbjct: 13 FGAFLSLLFPRCCVVCGRALAKGEECICAVCNMDLP---RTDYHL-----RRDNPVELLF 64
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
PL + S Y S ++ LLKY + ++ +M ++M
Sbjct: 65 WGKFPLERATSFFYYRKGSDFRRILHLLKYGGQKEIGAIMGRYMA 109
>gi|291299363|ref|YP_003510641.1| phosphoribosyltransferase [Stackebrandtia nassauensis DSM 44728]
gi|290568583|gb|ADD41548.1| phosphoribosyltransferase [Stackebrandtia nassauensis DSM 44728]
Length = 244
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 17/115 (14%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
MP + L + P C ++ LC C + D
Sbjct: 1 MPIHATPALEALHRLRDLVAPRDCGGCGAVVVPGRSLCPGCLRLL--------------D 46
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
++ + P+T + Y + + K H R DLA+ +++ + R
Sbjct: 47 SLAPVAAEPGSGGPPVT---AAGEYTGVLRRCLLAFKEHRRRDLAVPLSRLLARA 98
>gi|251787886|ref|YP_003002607.1| gluconate periplasmic binding protein [Dickeya zeae Ech1591]
gi|247536507|gb|ACT05128.1| gluconate periplasmic binding protein [Dickeya zeae Ech1591]
Length = 239
Score = 42.6 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 5/85 (5%)
Query: 22 SICPIYSR-IINLRFCLCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLTQ 78
+ C + + + + +C HC + + + +Q+ P
Sbjct: 6 AQCWLCQQPLYHSHHGICSHCRRHLP--QPPVCCPRCGLPSASHVLPCGRCLQQPPPWQS 63
Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTD 103
+ V+ Y LVR +K+ RT+
Sbjct: 64 LLFVSDYQPPLNTLVRRIKFQRRTE 88
>gi|315649838|ref|ZP_07902921.1| amidophosphoribosyltransferase-like protein [Paenibacillus vortex
V453]
gi|315274812|gb|EFU38193.1| amidophosphoribosyltransferase-like protein [Paenibacillus vortex
V453]
Length = 290
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 6/112 (5%)
Query: 10 SIIIELFHCIYP--SICPIYSRIINLRF---CLCGHCWSKIHFITATEHILKN-NKDNID 63
++ + + P C + +L +C C +I +I + D
Sbjct: 8 KLLGHMHRLLKPMNETCLACGKSASLARELPGICYGCSRQIPWIVNPRCLQCGRGIGCPD 67
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ RS Y + KY A ++A+ + R
Sbjct: 68 CNRFGMSMSKRSFILNRSAVTYDAQMREWLAQYKYRGNERYAPLLAEMLLRA 119
>gi|254784709|ref|YP_003072137.1| competence protein ComF [Teredinibacter turnerae T7901]
gi|237683729|gb|ACR10993.1| competence protein ComF [Teredinibacter turnerae T7901]
Length = 234
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
PS C + + +C C +++ + + +Q +
Sbjct: 20 PSSCILCNNPALKP--ICAQCENELPRLGKRCQCCALPTTTDTALCGECLQTTPAFDRTY 77
Query: 81 SVTLYCDMSCVLVRLLKYH 99
S +Y L+ K+
Sbjct: 78 SAFIYQGYVPWLINRFKHQ 96
>gi|170766640|ref|ZP_02901093.1| protein GntX [Escherichia albertii TW07627]
gi|170124078|gb|EDS93009.1| protein GntX [Escherichia albertii TW07627]
Length = 227
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + S + LC C +I + ++K P ++ +V
Sbjct: 22 ICSVCSHAAHKHEMLCPQC--------------GLPTAHIALPCGRCLKKPPPWQRLITV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
+ Y L+ LK+ R+++
Sbjct: 68 SSYTPPLSPLIHQLKFSQRSEI 89
>gi|134279927|ref|ZP_01766639.1| ComF family protein [Burkholderia pseudomallei 305]
gi|167901143|ref|ZP_02488348.1| ComF family protein [Burkholderia pseudomallei NCTC 13177]
gi|254181942|ref|ZP_04888539.1| putative competence protein [Burkholderia pseudomallei 1655]
gi|134249127|gb|EBA49209.1| ComF family protein [Burkholderia pseudomallei 305]
gi|184212480|gb|EDU09523.1| putative competence protein [Burkholderia pseudomallei 1655]
Length = 255
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 34/123 (27%), Gaps = 7/123 (5%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55
+ A+ ++ P+ C + + +C C W++ L
Sbjct: 11 IRAMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + + P ++ Y L LK+ + L + + R+
Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128
Query: 116 LEK 118
Sbjct: 129 ATD 131
>gi|295395810|ref|ZP_06805998.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
49030]
gi|294971345|gb|EFG47232.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
49030]
Length = 233
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 25/107 (23%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
++ E + P +C LC C + D +P+ +M
Sbjct: 1 MLSEFVDLLIPRVCAGCGCETVS---LCSACVRSL-----------------DTEPVATM 40
Query: 71 QKDLPLTQIRS--VTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+++ Y + ++ K HDR DLA ++ + R
Sbjct: 41 ---PRYGTVKAYGAGSYEGVLRNVIVNYKEHDRRDLAPVLGLMLARA 84
>gi|213581450|ref|ZP_03363276.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 201
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 14/76 (18%)
Query: 29 RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDM 88
R + R LC C + + +QK P ++ SV+ Y
Sbjct: 2 RAVRQRVSLCPQC--------------GLPAGHPSLPCGRCLQKPPPWQRLVSVSDYTPP 47
Query: 89 SCVLVRLLKYHDRTDL 104
+LV LK+ R+++
Sbjct: 48 LSLLVHQLKFTRRSEI 63
>gi|325954615|ref|YP_004238275.1| phosphoribosyltransferase protein-like protein [Weeksella virosa
DSM 16922]
gi|323437233|gb|ADX67697.1| phosphoribosyltransferase protein-like protein [Weeksella virosa
DSM 16922]
Length = 222
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 28/113 (24%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
K I+ L +P+ C S +IN R C C I F T L
Sbjct: 4 KPIVDSLVDLFFPARCLGCSSVINRRQYFCVSCLQAIPF---THFSLS------------ 48
Query: 69 SMQKDLPLTQIRS--------VTLY---CDMSCVLVRLLKYHDRTDLAIMMAQ 110
Q +L ++RS + +S ++ +KY ++ ++ + A+
Sbjct: 49 --QDNLVYHRLRSLCLVESATAVFFFEKEHLSQQILHAIKYKNQAEIGALFAE 99
>gi|71901876|ref|ZP_00683937.1| competence protein F [Xylella fastidiosa Ann-1]
gi|71728364|gb|EAO30534.1| competence protein F [Xylella fastidiosa Ann-1]
Length = 241
Score = 42.6 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 7/109 (6%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPLKSM 70
L + PS C + + LC C + + + I +
Sbjct: 18 RLLRWLLPSYCLACNEPGHQGKTLCATCQLLLPRMENACLRCAAPLKELEGIHPTCGPCL 77
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRVLE 117
PL + LY L+ K+H DLA ++A+ M +
Sbjct: 78 YDPPPLETAHAAFLYHWPINKLISRFKFH--QDLACGHLLAENMAIAAQ 124
>gi|304438488|ref|ZP_07398428.1| competence protein F [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368571|gb|EFM22256.1| competence protein F [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 220
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 16/89 (17%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
++ L ++P CP + + C C ++ +++ D + +
Sbjct: 6 LLSALLDFLFPPRCPSCHACVERQ-GFCPACARQL---IGMRRMMEMGAMAEDLTGVWVL 61
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
Y D L+R LKYH
Sbjct: 62 AH------------YRDGIRDLLRALKYH 78
>gi|330012477|ref|ZP_08307391.1| comF family protein [Klebsiella sp. MS 92-3]
gi|328533828|gb|EGF60507.1| comF family protein [Klebsiella sp. MS 92-3]
Length = 212
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 14/84 (16%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC SR + LC C + +QK P ++ +V
Sbjct: 10 ICSRCSRALLACPPLCPQC--------------GLPAAASRHPCGRCLQKPPPWHRLVAV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106
Y LV+ LK+H R +L
Sbjct: 56 NDYRPPLSGLVQQLKFHHRPELGP 79
>gi|288575565|ref|ZP_05977205.2| ComF/gntX family protein [Neisseria mucosa ATCC 25996]
gi|288567578|gb|EFC89138.1| ComF/gntX family protein [Neisseria mucosa ATCC 25996]
Length = 250
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 32/100 (32%), Gaps = 8/100 (8%)
Query: 23 ICPIYSRIINL-----RFCLCGHCWSKIH-FIT--ATEHILKNNKDNIDKDPLKSMQKDL 74
C + +++ C C + + F T A L +K
Sbjct: 22 RCVLCHALVSACETRPYGGFCDGCAADLEEFFTDAANSCPLCFRPIQGGVVCGGCQKKPP 81
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
++ + Y ++R LK+ ++ +A+ M R
Sbjct: 82 AFERMWASLYYEPPVSSMIRALKHLSDLGMSRPLAELMRR 121
>gi|160932697|ref|ZP_02080086.1| hypothetical protein CLOLEP_01538 [Clostridium leptum DSM 753]
gi|156867771|gb|EDO61143.1| hypothetical protein CLOLEP_01538 [Clostridium leptum DSM 753]
Length = 227
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 11/109 (10%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
+ L YP+ CP ++ C +C S+ + I N + + +
Sbjct: 2 KFLRRLLRSFYPARCPYCGKVTTPFEEGCKNCVSQNPGQSEAFWIYHPYWGNDNIELICC 61
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ ++ V K+H R + A M R +++
Sbjct: 62 SAWPY-WDKPKAA----------VLRFKFHGRREYAESFGLSMARSVKE 99
>gi|255019980|ref|ZP_05292053.1| Competence protein F [Acidithiobacillus caldus ATCC 51756]
gi|254970509|gb|EET27998.1| Competence protein F [Acidithiobacillus caldus ATCC 51756]
Length = 243
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 29/106 (27%), Gaps = 6/106 (5%)
Query: 13 IELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
L + + P C + LC C + + D
Sbjct: 23 ARLLNWLLPERCRSC----DAPGVPLCPACLGDWPRLPDERCAYCALPTAANGDCPVCAL 78
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ-WMFRVL 116
+ P + +Y + K+ DR D +A+ WM +
Sbjct: 79 EAPPYDYCFTPFVYAAPLDAAISAWKFGDRLDWTRPLARAWMTAMG 124
>gi|320120448|gb|EFE27816.2| phosphoribosyltransferase [Filifactor alocis ATCC 35896]
Length = 245
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 6/97 (6%)
Query: 15 LFHCIYPSI--CPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
I+PS C I + LC C+ K+ F + + +
Sbjct: 18 FGELIFPSNLNCIGCGESIWNKNPYSLCHSCYQKLEFTD--QVCKHCGRRTLLGTSCFCQ 75
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107
+ I + +Y D L+ KY +T L+
Sbjct: 76 SEHYYFDSIDTCLVYNDFLQKLIFRYKYGHQTYLSRF 112
>gi|313893733|ref|ZP_07827300.1| comF family protein [Veillonella sp. oral taxon 158 str. F0412]
gi|313441747|gb|EFR60172.1| comF family protein [Veillonella sp. oral taxon 158 str. F0412]
Length = 231
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 16/40 (40%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH 53
L ++P +CP + + C C++ + I H
Sbjct: 2 SLLDFLFPPVCPHCGAPVATQGDWCKTCFTDLLHIRHVPH 41
>gi|319900815|ref|YP_004160543.1| phosphoribosyltransferase [Bacteroides helcogenes P 36-108]
gi|319415846|gb|ADV42957.1| phosphoribosyltransferase [Bacteroides helcogenes P 36-108]
Length = 234
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
+K+ ++ +P C + ++ C+C C + T++ L+ +
Sbjct: 3 SVLKTWLLPFVRLFFPCRCAVCGSVLREGEECVCMKCNMDMP---RTDYHLRTD------ 53
Query: 65 DPLKSMQ-KDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+P++ M LPL + S Y S ++ LLKY R D+ +M ++M
Sbjct: 54 NPVECMFWGKLPLERATSCFFYHKGSDFRHVLHLLKYGGRKDIGEVMGRFMA 105
>gi|319788564|ref|YP_004148039.1| phosphoribosyltransferase [Pseudoxanthomonas suwonensis 11-1]
gi|317467076|gb|ADV28808.1| phosphoribosyltransferase [Pseudoxanthomonas suwonensis 11-1]
Length = 246
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 1/118 (0%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+ + ++ + + + P C + + LC C +
Sbjct: 11 LRSWPALLRDLPARICAVLLPPRCLLCGEPGDDGRDLCAACHRALP-RNHCACPRCAIPL 69
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ ++K PL + +Y L+ K+H ++A M L
Sbjct: 70 AVPGTCGHCLRKAPPLQATWASFVYAPPVDRLLARYKFHHDLAAGRLLAGLMLPALAD 127
>gi|104784036|ref|YP_610534.1| competence protein ComF [Pseudomonas entomophila L48]
gi|95113023|emb|CAK17751.1| putative competence protein ComF [Pseudomonas entomophila L48]
Length = 245
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 30/93 (32%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + + LC C S++ ++ ++ +++ +
Sbjct: 20 TCLLCDEPARQPYPLCPACESELPWLVEQCIRCALPLSLEGLTCASCSRRRPAFSRVVAA 79
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
Y L+ K++ + L +MAQ +
Sbjct: 80 WHYGFPVDTLISRFKHNSQWPLGRLMAQLLGHA 112
>gi|296160422|ref|ZP_06843239.1| phosphoribosyltransferase [Burkholderia sp. Ch1-1]
gi|295889403|gb|EFG69204.1| phosphoribosyltransferase [Burkholderia sp. Ch1-1]
Length = 261
Score = 42.2 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 37/121 (30%), Gaps = 9/121 (7%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKN 57
+TV S + P++C + + +C C W++ + A +
Sbjct: 18 ARTVHSAWPRVAQAALPNLCALCGNL--SHTTICAGCNAAYWNEGRLRCTVCAVPLSVTR 75
Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ P ++ Y L LK+ R LA + + R+ +
Sbjct: 76 WAARTQYRCADCASEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGRRLARLAQ 135
Query: 118 K 118
Sbjct: 136 D 136
>gi|167917392|ref|ZP_02504483.1| ComF family protein [Burkholderia pseudomallei BCC215]
gi|217419806|ref|ZP_03451312.1| ComF family protein [Burkholderia pseudomallei 576]
gi|254296008|ref|ZP_04963465.1| putative competence protein [Burkholderia pseudomallei 406e]
gi|157805585|gb|EDO82755.1| putative competence protein [Burkholderia pseudomallei 406e]
gi|217397110|gb|EEC37126.1| ComF family protein [Burkholderia pseudomallei 576]
Length = 255
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 33/123 (26%), Gaps = 7/123 (5%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55
+ A+ ++ P+ C + + +C C W++ L
Sbjct: 11 IRAMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + P ++ Y L LK+ + L + + R+
Sbjct: 69 PGARGATRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128
Query: 116 LEK 118
Sbjct: 129 ATD 131
>gi|54295172|ref|YP_127587.1| hypothetical protein lpl2252 [Legionella pneumophila str. Lens]
gi|53755004|emb|CAH16492.1| hypothetical protein lpl2252 [Legionella pneumophila str. Lens]
Length = 234
Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 9/100 (9%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKDLP 75
PSIC + ++ + +C +C + F+ + D + ++K
Sbjct: 15 PSICTLCNQFHKSQLAVCSNC---MEFMKQLGSCCQYCAYPLSDDTY-LVCGQCVRKRPS 70
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + L+ KYH+ LA + Q +
Sbjct: 71 FDSAYIAYRFEEPLRSLIHQFKYHNGLYLASFLKQLLLNA 110
>gi|188025401|ref|ZP_02958488.2| hypothetical protein PROSTU_00226 [Providencia stuartii ATCC 25827]
gi|188023650|gb|EDU61690.1| hypothetical protein PROSTU_00226 [Providencia stuartii ATCC 25827]
Length = 229
Score = 42.2 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81
C + + + + +C C +I ++ H + + + + ++ +
Sbjct: 9 ACWLCQQPLKLVDHGICAFCIKRIPTMSNVCHRCALPAEQGHILCGRCLIQPPAWHRLIA 68
Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
V+ Y L+ K++ + LA +A+
Sbjct: 69 VSPYQAPLRKLIHRYKFNPQPQLAFTLAK 97
>gi|54298222|ref|YP_124591.1| hypothetical protein lpp2280 [Legionella pneumophila str. Paris]
gi|53752007|emb|CAH13433.1| hypothetical protein lpp2280 [Legionella pneumophila str. Paris]
Length = 234
Score = 41.8 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 9/100 (9%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITAT-----EHILKNNKDNIDKDPLKSMQKDLP 75
PSIC + ++ + +C +C + F+ + D + ++K
Sbjct: 15 PSICTLCNQFHKSQLAVCSNC---MEFMKQLGSCCQYCAYPLSDDTY-LVCGQCVRKRPS 70
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + L+ KYH+ LA + Q +
Sbjct: 71 FDSAYIAYRFEEPLRSLIHQFKYHNGLYLASFLKQLLLNA 110
>gi|94309203|ref|YP_582413.1| amidophosphoribosyltransferases-like protein [Cupriavidus
metallidurans CH34]
gi|93353055|gb|ABF07144.1| putative amidophosphoribosyltransferase [Cupriavidus metallidurans
CH34]
Length = 279
Score = 41.8 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA--TEHILKNNKDNIDKDPLKS 69
I L+ + PS+C I +++ R +C C + I + + +
Sbjct: 52 ITGLWSALLPSVCLICAKV--QRDVVCAGCADTLLRIVPRCPRCAMPGTIPGVKAGRCDA 109
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
D P+ ++ Y + LV LK+ R A +A+ M
Sbjct: 110 CADDDPIDATLTLGNYITPADRLVLRLKFAARLPAAAWIARQMA 153
>gi|48428733|gb|AAT42382.1| putative amidophosphoribosyltransferase [Collimonas fungivorans
Ter331]
Length = 236
Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 9/103 (8%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------PLKSMQKDL 74
PS C + R + + +C C S +F ++ D +++
Sbjct: 6 PSCCALCGR--SGKQVICDGC-SGHYFSGRPPRCIQCANRLPRLDGDNPALCGNCLKQAR 62
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
Y + LV LK+ + LA AQ +F
Sbjct: 63 AFDATIVACDYTAPADRLVLALKFGGQLALAPAFAQMLFAASR 105
>gi|71275558|ref|ZP_00651844.1| competence protein F [Xylella fastidiosa Dixon]
gi|71900761|ref|ZP_00682882.1| competence protein F [Xylella fastidiosa Ann-1]
gi|170729293|ref|YP_001774726.1| competence protein F [Xylella fastidiosa M12]
gi|71163858|gb|EAO13574.1| competence protein F [Xylella fastidiosa Dixon]
gi|71729491|gb|EAO31601.1| competence protein F [Xylella fastidiosa Ann-1]
gi|167964086|gb|ACA11096.1| competence protein F [Xylella fastidiosa M12]
Length = 241
Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 7/109 (6%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPLKSM 70
L + PS C + + LC C + + + I +
Sbjct: 18 RLLRWLLPSYCLACNEPGHQGKTLCATCQLLLPRMENACLRCAAPLKELEGIHPTCGPCL 77
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRVLE 117
PL + LY L+ K+H DLA ++A M +
Sbjct: 78 YDPPPLETAHAAFLYHWPINKLISRFKFH--QDLACGHLLADNMAMAAQ 124
>gi|227498341|ref|ZP_03928491.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226903803|gb|EEH89721.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 209
Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 23/96 (23%), Gaps = 15/96 (15%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
+ YP CP + LC C + ++ D
Sbjct: 19 ILAIFYPHYCPACHEEVEGPGLLCEACRRSTY-----------APGYLELKKETVPHLDA 67
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
R Y + LKY R D M +
Sbjct: 68 VYRLYR----YEGGVKRALHGLKYEKRRDYLDRMGE 99
>gi|301308350|ref|ZP_07214304.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|300833820|gb|EFK64436.1| conserved hypothetical protein [Bacteroides sp. 20_3]
Length = 97
Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 11/93 (11%)
Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
L + +P++C I R ++ +C C + ++ +
Sbjct: 8 LLNLFFPNLCKICKRPLVEGEEQICLKCLCDL--------PHTGYHQLVNNPVEQLFIGK 59
Query: 74 LPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDL 104
+ + Y L+ LKYHD +L
Sbjct: 60 NRIEYATAYLRYEKGGKVQSLIHSLKYHDNKEL 92
>gi|302036453|ref|YP_003796775.1| putative phosphoribosyltransferase [Candidatus Nitrospira defluvii]
gi|300604517|emb|CBK40849.1| putative Phosphoribosyltransferase [Candidatus Nitrospira defluvii]
Length = 270
Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 10/99 (10%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDN------- 61
II + + PS C + + C CW I + +
Sbjct: 10 IIRQATRLLLPSDCATCEQPLTDDPTPFFCRQCWGLIRPLQGPSCSRCHRPFASPYATLH 69
Query: 62 -IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + +Q+ + YC + LLKY
Sbjct: 70 SPTHECHDCRTRAPRYSQVWAAYAYCSPLQDAIALLKYR 108
>gi|260173249|ref|ZP_05759661.1| putative amidophosphoribosyl-transferase [Bacteroides sp. D2]
gi|315921522|ref|ZP_07917762.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313695397|gb|EFS32232.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 235
Score = 41.8 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ ++P C + R + C+C C K+ N D +
Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTVCNIKL--------PRTNYHLRKDNPVERLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+PL + S Y S +++ LKY + ++ +M ++M
Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107
>gi|282848837|ref|ZP_06258230.1| ComF family protein [Veillonella parvula ATCC 17745]
gi|294791747|ref|ZP_06756895.1| putative ComF family protein [Veillonella sp. 6_1_27]
gi|294793608|ref|ZP_06758745.1| putative ComF family protein [Veillonella sp. 3_1_44]
gi|282581491|gb|EFB86881.1| ComF family protein [Veillonella parvula ATCC 17745]
gi|294455178|gb|EFG23550.1| putative ComF family protein [Veillonella sp. 3_1_44]
gi|294456977|gb|EFG25339.1| putative ComF family protein [Veillonella sp. 6_1_27]
Length = 231
Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH 53
L+ ++P +CP + + C C++ + I H
Sbjct: 2 SLWDFLFPPVCPHCGAPVATQGDWCKACFTDLLHIRHVPH 41
>gi|323343504|ref|ZP_08083731.1| amidophosphoribosyl-transferase [Prevotella oralis ATCC 33269]
gi|323095323|gb|EFZ37897.1| amidophosphoribosyl-transferase [Prevotella oralis ATCC 33269]
Length = 231
Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 10/109 (9%)
Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ S L I P C I R+ LC C + T D D +
Sbjct: 1 MISFFGRLLDLILPRQCSICGCRLAETEQVLCAVCNLMLP---RTGFA----DDAYDNEM 53
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSC--VLVRLLKYHDRTDLAIMMAQWMF 113
+ LP+ + ++ Y S ++ LKY + ++ + +M
Sbjct: 54 AQLFWGRLPIERSAALFYYEAQSQVSRMIYELKYRNHPEIGERLGCFMA 102
>gi|256820209|ref|YP_003141488.1| phosphoribosyltransferase protein-like protein [Capnocytophaga
ochracea DSM 7271]
gi|256581792|gb|ACU92927.1| phosphoribosyltransferase protein-like protein [Capnocytophaga
ochracea DSM 7271]
Length = 229
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 13/106 (12%)
Query: 11 IIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
I+ ++ + P+ C ++ + LC +C K+ T+ L+ + +
Sbjct: 2 ILSDILSVLSPAYCRGCGKLLVTGEQFLCVNCREKL---EETDFHLQAENLFTQRLTEEC 58
Query: 70 MQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ Y +M+ L+ LLKY + + +W+
Sbjct: 59 EVF------AATALFYFKKDNMAQHLIHLLKYKGEEQIGEWLGRWL 98
>gi|289209444|ref|YP_003461510.1| phosphoribosyltransferase [Thioalkalivibrio sp. K90mix]
gi|288945075|gb|ADC72774.1| phosphoribosyltransferase [Thioalkalivibrio sp. K90mix]
Length = 258
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 31/111 (27%), Gaps = 8/111 (7%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
++++ +YP C + + +C C + + A
Sbjct: 26 ALRALSAWAARALYPDHCGLCLAPLPEGGAICPACRKDLVRVEAP-CPGCAAPLPATVAC 84
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR-------TDLAIMMAQ 110
++ + +R+ Y ++ K DLA A+
Sbjct: 85 PACQRRPPAVDALRAPWAYAWPLDRVLLAYKRSGHARAERILVDLAAQAAR 135
>gi|157148995|ref|YP_001456315.1| gluconate periplasmic binding protein [Citrobacter koseri ATCC
BAA-895]
gi|157086200|gb|ABV15878.1| hypothetical protein CKO_04833 [Citrobacter koseri ATCC BAA-895]
Length = 243
Score = 41.4 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 14/81 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R R LC C + + +QK P ++ +V
Sbjct: 38 ICSVCTRAARRRVSLCPQC--------------GLPAAHAAIPCGRCLQKPPPWQRLVTV 83
Query: 83 TLYCDMSCVLVRLLKYHDRTD 103
+ Y +L+ LK+ R+D
Sbjct: 84 SDYVPPLSLLIHQLKFSRRSD 104
>gi|312963457|ref|ZP_07777939.1| phosphoribosyltransferase [Pseudomonas fluorescens WH6]
gi|311282263|gb|EFQ60862.1| phosphoribosyltransferase [Pseudomonas fluorescens WH6]
Length = 245
Score = 41.4 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 23/79 (29%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C I +C C +++ ++ + + Q+ Q+ +
Sbjct: 20 TCLICDEPTETADSVCNACETELPWLMEHCEVCALPLPMDGLVCGQCQQQPPAFKQVVAP 79
Query: 83 TLYCDMSCVLVRLLKYHDR 101
Y L+ K+ R
Sbjct: 80 WTYSFPVDSLISRFKHQAR 98
>gi|256419923|ref|YP_003120576.1| phosphoribosyltransferase [Chitinophaga pinensis DSM 2588]
gi|256034831|gb|ACU58375.1| phosphoribosyltransferase [Chitinophaga pinensis DSM 2588]
Length = 232
Score = 41.4 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 21/102 (20%)
Query: 19 IYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77
YP C + N LC C ++ F + +P++ +
Sbjct: 15 FYPHTCDGCGIELTNTEHILCLRCHKRLPF---------TGYQLLQDNPVEKIF----WG 61
Query: 78 Q--IRSVTL---YCDMS--CVLVRLLKYHDRTDLAIMMAQWM 112
+ +R Y + L+ KY R D+A + M
Sbjct: 62 RVNVRHAMATCYYRKNAFLQQLIYQFKYKQREDIASYFGRLM 103
>gi|237717308|ref|ZP_04547789.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262406074|ref|ZP_06082624.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294806839|ref|ZP_06765664.1| ComF family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229443291|gb|EEO49082.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262356949|gb|EEZ06039.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294445868|gb|EFG14510.1| ComF family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 235
Score = 41.4 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ ++P C + R + C+C C N D +
Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+PL + S Y S +++ LKY + ++ +M ++M
Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107
>gi|15836668|ref|NP_297356.1| competence protein F [Xylella fastidiosa 9a5c]
gi|9104833|gb|AAF82876.1|AE003860_3 competence protein F [Xylella fastidiosa 9a5c]
Length = 241
Score = 41.4 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 7/109 (6%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPLKSM 70
L + PS C + + LC C + + + I +
Sbjct: 18 RLLRWLLPSYCLACNEPGHQGKTLCATCQLLLPRMENACLRCAAPLKELEGIHPTCGPCL 77
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRVLE 117
PL + LY L+ K+H DLA ++A M +
Sbjct: 78 YDPPPLETAHAAFLYHWPINKLISRFKFH--QDLACGHLLADNMAMAAQ 124
>gi|269797854|ref|YP_003311754.1| amidophosphoribosyltransferase-like protein [Veillonella parvula
DSM 2008]
gi|269094483|gb|ACZ24474.1| amidophosphoribosyltransferase-like protein [Veillonella parvula
DSM 2008]
Length = 231
Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH 53
L+ ++P +CP + + C C++ + I H
Sbjct: 2 SLWDFLFPPVCPHCGAPVATQGDWCKACFTDLLHIRHIPH 41
>gi|160884054|ref|ZP_02065057.1| hypothetical protein BACOVA_02030 [Bacteroides ovatus ATCC 8483]
gi|156110396|gb|EDO12141.1| hypothetical protein BACOVA_02030 [Bacteroides ovatus ATCC 8483]
Length = 234
Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ ++P C + R + C+C C N D +
Sbjct: 11 LSSFLSLLFPHCCVVCGRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+PL + S Y S +++ LKY + ++ +M ++M
Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107
>gi|325299192|ref|YP_004259109.1| phosphoribosyltransferase [Bacteroides salanitronis DSM 18170]
gi|324318745|gb|ADY36636.1| phosphoribosyltransferase [Bacteroides salanitronis DSM 18170]
Length = 229
Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 11/105 (10%)
Query: 14 ELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
+L +P +C R++ LC C + + + + +
Sbjct: 6 DLREFFFPRLCVSCGKRLMQGEEGLCLAC--------SASLPYTSIYNKEGNEMERCFWG 57
Query: 73 DLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
P+ + S+ Y ++ +KYH+R L + M +WM
Sbjct: 58 RFPIVRASSLFYYAKGGKVAQVLYAMKYHNRRKLCVRMGEWMGSA 102
>gi|91781672|ref|YP_556878.1| putative competence protein f-related protein [Burkholderia
xenovorans LB400]
gi|91685626|gb|ABE28826.1| Putative competence protein f-related protein [Burkholderia
xenovorans LB400]
Length = 261
Score = 41.4 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 9/121 (7%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKN 57
+ V S + P++C + + +C C W++ + A +
Sbjct: 18 ARAVHSAWPRVAQVALPNLCALCGNL--SHTTICAGCDAAYWNEERLRCTVCAVPLSVTQ 75
Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ P ++ Y L LK+ R LA Q + R+ +
Sbjct: 76 WAARTQYRCADCAGEPPPFDATFALADYRAPLDTLAVGLKFRARLMLAHEFGQRLARLAQ 135
Query: 118 K 118
Sbjct: 136 D 136
>gi|270264448|ref|ZP_06192714.1| gluconate periplasmic binding protein [Serratia odorifera 4Rx13]
gi|270041584|gb|EFA14682.1| gluconate periplasmic binding protein [Serratia odorifera 4Rx13]
Length = 227
Score = 41.4 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81
C + + + R +C +C + + + +Q+ P +
Sbjct: 7 RCWLCRQPLCLSRHGICSYCLRHLPAKPLCCPCCGLPAGDAAHPCGRCLQRPPPWQALVF 66
Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
V Y L++ K+ +LA ++A+
Sbjct: 67 VGDYVAPLRQLIKKFKFQHAPELAPLLAR 95
>gi|313896725|ref|ZP_07830273.1| comF family protein [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974642|gb|EFR40109.1| comF family protein [Selenomonas sp. oral taxon 137 str. F0430]
Length = 216
Score = 41.4 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 15/89 (16%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
++ ++P CP + R CG C +T + ++ + ++
Sbjct: 1 MLSMFVDFLFPPRCPSCKSYVERRGSFCGAC---TRRLTGLRTVARSVDAVSYLAGIWAL 57
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
Y + L+R LKY
Sbjct: 58 GY------------YREGVRDLLRTLKYR 74
>gi|210630450|ref|ZP_03296453.1| hypothetical protein COLSTE_00337 [Collinsella stercoris DSM 13279]
gi|210160452|gb|EEA91423.1| hypothetical protein COLSTE_00337 [Collinsella stercoris DSM 13279]
Length = 243
Score = 41.4 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 5/108 (4%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDK 64
+ ++ + + P+ C R L C C + I L+ D
Sbjct: 5 SRLAAVTEVIGELLSPTRCASCER----PGALICDDCLRTMVRIDPAHACLRCGAPFGDM 60
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ L + + ++ +VR K LA +A+ M
Sbjct: 61 LCTECRGAASDLDRCLAAVVFDGPPARIVRAYKDAGERRLAERIAEIM 108
>gi|261250553|ref|ZP_05943128.1| predicted amidophosphoribosyltransferase [Vibrio orientalis CIP
102891]
gi|260939122|gb|EEX95109.1| predicted amidophosphoribosyltransferase [Vibrio orientalis CIP
102891]
Length = 232
Score = 41.4 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 23/89 (25%), Gaps = 4/89 (4%)
Query: 12 IIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNID-KDPLKS 69
II + P C + + C C F+ + +
Sbjct: 6 IINYIADLLPLNCELCGLALDEQHNGFCFVC-RD-RFLPIPRCQCCGLPCVAETLLCGEC 63
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ P ++ V Y V LKY
Sbjct: 64 LVTPPPWRRLYCVGDYQQPLSTYVHHLKY 92
>gi|154499872|ref|ZP_02037910.1| hypothetical protein BACCAP_03529 [Bacteroides capillosus ATCC
29799]
gi|150271470|gb|EDM98727.1| hypothetical protein BACCAP_03529 [Bacteroides capillosus ATCC
29799]
Length = 220
Score = 41.4 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 25/85 (29%), Gaps = 17/85 (20%)
Query: 15 LFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
L ++P C R++ +C C S + ++T + Q
Sbjct: 7 LLDLLFPPRCVFCGRVLGTGEREICSQCQSTLPWLT----------------EEAAEQTG 50
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKY 98
+ S Y + + K+
Sbjct: 51 EFFDKCVSPLRYENFVRDSIHRYKF 75
>gi|217967794|ref|YP_002353300.1| hypothetical protein Dtur_1412 [Dictyoglomus turgidum DSM 6724]
gi|217336893|gb|ACK42686.1| conserved hypothetical protein [Dictyoglomus turgidum DSM 6724]
Length = 231
Score = 41.1 bits (95), Expect = 0.046, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKD 73
L ++P C R +C +C K+ F + +D +++
Sbjct: 9 LLDVLFPKKCVFCGRY--SEGFVCKNCLKKLKFPE-YYCLSCGQPLTVDLQICYNCNKEE 65
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
V Y D ++ L K+ ++ +A +Q
Sbjct: 66 RKWDGYEFVAYYEDGWKDIISLFKFKNKPYIADFFSQ 102
>gi|83815714|ref|YP_445203.1| competence protein F [Salinibacter ruber DSM 13855]
gi|83757108|gb|ABC45221.1| competence protein F [Salinibacter ruber DSM 13855]
Length = 239
Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 31/117 (26%), Gaps = 8/117 (6%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDN 61
+I++ V+ L YP C LC C + E + ++
Sbjct: 10 SIVRFVRDCARGLLDVAYPPRCLGCGGRAESPQLPLCPTCVRSLERAPEVEVTARLDRLP 69
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
I + + LKY +R + + + M +
Sbjct: 70 IGTSIFDEALALWVFDKG-------GTLQAVQHALKYQNRPRYGVPLGRLMGEAFAE 119
>gi|76811333|ref|YP_332083.1| ComF family protein [Burkholderia pseudomallei 1710b]
gi|126440013|ref|YP_001057539.1| putative competence protein [Burkholderia pseudomallei 668]
gi|126451766|ref|YP_001064787.1| putative competence protein [Burkholderia pseudomallei 1106a]
gi|167844143|ref|ZP_02469651.1| ComF family protein [Burkholderia pseudomallei B7210]
gi|167909363|ref|ZP_02496454.1| ComF family protein [Burkholderia pseudomallei 112]
gi|226193721|ref|ZP_03789324.1| ComF family protein [Burkholderia pseudomallei Pakistan 9]
gi|242314129|ref|ZP_04813145.1| ComF family protein [Burkholderia pseudomallei 1106b]
gi|254187875|ref|ZP_04894387.1| putative competence protein [Burkholderia pseudomallei Pasteur
52237]
gi|254196896|ref|ZP_04903320.1| putative competence protein [Burkholderia pseudomallei S13]
gi|254261894|ref|ZP_04952948.1| competence protein homolog [Burkholderia pseudomallei 1710a]
gi|76580786|gb|ABA50261.1| ComF family protein [Burkholderia pseudomallei 1710b]
gi|126219506|gb|ABN83012.1| putative competence protein [Burkholderia pseudomallei 668]
gi|126225408|gb|ABN88948.1| ComF family protein [Burkholderia pseudomallei 1106a]
gi|157935555|gb|EDO91225.1| putative competence protein [Burkholderia pseudomallei Pasteur
52237]
gi|169653639|gb|EDS86332.1| putative competence protein [Burkholderia pseudomallei S13]
gi|225934299|gb|EEH30283.1| ComF family protein [Burkholderia pseudomallei Pakistan 9]
gi|242137368|gb|EES23770.1| ComF family protein [Burkholderia pseudomallei 1106b]
gi|254220583|gb|EET09967.1| competence protein homolog [Burkholderia pseudomallei 1710a]
Length = 255
Score = 41.1 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 7/123 (5%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55
+ + ++ P+ C + + +C C W++ L
Sbjct: 11 IRTMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + + P ++ Y L LK+ + L + + R+
Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128
Query: 116 LEK 118
Sbjct: 129 ATD 131
>gi|237802414|ref|ZP_04590875.1| competence protein ComF [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331025271|gb|EGI05327.1| competence protein ComF [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 245
Score = 41.1 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 24/76 (31%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + + +C C +++ ++ A ++ +Q+ +
Sbjct: 20 ICLLCDERSEVPTPICVPCEAELPWLGAQCECCALPLPGAGLSCGLCSKRPPAFSQVIAP 79
Query: 83 TLYCDMSCVLVRLLKY 98
Y L+ K+
Sbjct: 80 WRYDFPVDSLITRFKH 95
>gi|291560001|emb|CBL38801.1| Predicted amidophosphoribosyltransferases [butyrate-producing
bacterium SSC/2]
Length = 236
Score = 41.1 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 15 LFHCIYPSICPIY-SRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQ 71
+ ++P ICP+ +++ +C C K FI K+ K+ + Q
Sbjct: 1 MLSFLFPPICPLCAKELLDKGEHICKICSKKQIFIKEPTCYSCGKSMKNQEKEYCSDCRQ 60
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ + +Y + +KY
Sbjct: 61 HPKNFERGMGLCIYQKPVTDSLAAIKY 87
>gi|159896698|ref|YP_001542945.1| phosphoribosyltransferase [Herpetosiphon aurantiacus ATCC 23779]
gi|159889737|gb|ABX02817.1| phosphoribosyltransferase [Herpetosiphon aurantiacus ATCC 23779]
Length = 223
Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 16/96 (16%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
L +YP C + C C+++ +T + + +
Sbjct: 8 SLLDLVYPPRCYSCGKAGTQ---FCPACFAECIPLTPPQRPQP-------------LAAN 51
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
PL + + + + KY + LA ++A
Sbjct: 52 SPLERALGIYPFQGSLRAAIHAFKYQNAHPLAQILA 87
>gi|153828329|ref|ZP_01980996.1| ComF family protein [Vibrio cholerae 623-39]
gi|148876159|gb|EDL74294.1| ComF family protein [Vibrio cholerae 623-39]
Length = 286
Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTSVDQCGQCLGQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144
>gi|254448931|ref|ZP_05062386.1| ComF family protein [gamma proteobacterium HTCC5015]
gi|198261468|gb|EDY85758.1| ComF family protein [gamma proteobacterium HTCC5015]
Length = 249
Score = 41.1 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 31/95 (32%), Gaps = 4/95 (4%)
Query: 8 VKSIIIELFHCIYPSICPIYS---RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
++S + + + ++P C + LC C + + + +
Sbjct: 8 LESTLSGVVNALFPDRCFECQCRLAPSSEAALLCDDCADLLPALE-MSCPRCGVPMSNGQ 66
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + + +V Y +S L++ K+
Sbjct: 67 LCGQCIARPPKWRAAAAVWCYEGLSKALIQRYKFR 101
>gi|152972291|ref|YP_001337437.1| putative periplasmic gluconate-binding protein in GNT I transport
system [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150957140|gb|ABR79170.1| putative periplasmic gluconate-binding protein in GNT I transport
system [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 212
Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 14/82 (17%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC SR + LC C + +QK P ++ +V
Sbjct: 10 ICSRCSRALLACPPLCPQC--------------GLPAAASRHPCGRCLQKPPPWHRLVAV 55
Query: 83 TLYCDMSCVLVRLLKYHDRTDL 104
Y LV+ LK+H R +L
Sbjct: 56 NDYRPPLSGLVQQLKFHHRPEL 77
>gi|153212576|ref|ZP_01948323.1| ComF family protein [Vibrio cholerae 1587]
gi|124116447|gb|EAY35267.1| ComF family protein [Vibrio cholerae 1587]
Length = 286
Score = 41.1 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTSVDQCGQCLGQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144
>gi|229513647|ref|ZP_04403111.1| hypothetical protein VCB_001294 [Vibrio cholerae TMA 21]
gi|229349524|gb|EEO14480.1| hypothetical protein VCB_001294 [Vibrio cholerae TMA 21]
Length = 286
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTSVDQCGQCLGQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144
>gi|88861080|ref|ZP_01135715.1| hypothetical protein PTD2_16826 [Pseudoalteromonas tunicata D2]
gi|88817008|gb|EAR26828.1| hypothetical protein PTD2_16826 [Pseudoalteromonas tunicata D2]
Length = 230
Score = 41.1 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 13 IELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFIT 49
+L + ++PS C + ++ LC HC + + FI
Sbjct: 3 QQLINWLFPSRCLMCQTLVTQNNEQLCPHCIADLPFIE 40
>gi|121600389|ref|YP_991524.1| ComF family protein [Burkholderia mallei SAVP1]
gi|124383797|ref|YP_001027402.1| ComF family protein [Burkholderia mallei NCTC 10229]
gi|126448718|ref|YP_001082367.1| ComF family protein [Burkholderia mallei NCTC 10247]
gi|167001963|ref|ZP_02267753.1| ComF family protein [Burkholderia mallei PRL-20]
gi|238563019|ref|ZP_00439525.2| ComF family protein [Burkholderia mallei GB8 horse 4]
gi|254174892|ref|ZP_04881553.1| ComF family protein [Burkholderia mallei ATCC 10399]
gi|254201770|ref|ZP_04908134.1| ComF family protein [Burkholderia mallei FMH]
gi|254207103|ref|ZP_04913454.1| ComF family protein [Burkholderia mallei JHU]
gi|254357587|ref|ZP_04973861.1| ComF family protein [Burkholderia mallei 2002721280]
gi|121229199|gb|ABM51717.1| ComF family protein [Burkholderia mallei SAVP1]
gi|124291817|gb|ABN01086.1| ComF family protein [Burkholderia mallei NCTC 10229]
gi|126241588|gb|ABO04681.1| ComF family protein [Burkholderia mallei NCTC 10247]
gi|147747664|gb|EDK54740.1| ComF family protein [Burkholderia mallei FMH]
gi|147752645|gb|EDK59711.1| ComF family protein [Burkholderia mallei JHU]
gi|148026651|gb|EDK84736.1| ComF family protein [Burkholderia mallei 2002721280]
gi|160695937|gb|EDP85907.1| ComF family protein [Burkholderia mallei ATCC 10399]
gi|238521500|gb|EEP84951.1| ComF family protein [Burkholderia mallei GB8 horse 4]
gi|243062289|gb|EES44475.1| ComF family protein [Burkholderia mallei PRL-20]
Length = 255
Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 33/123 (26%), Gaps = 7/123 (5%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55
+ + ++ P+ C + + +C C W++ L
Sbjct: 11 IRTMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + + P ++ Y L LK+ + L + + R+
Sbjct: 69 PGARGAMRFHCGACAKVPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARL 128
Query: 116 LEK 118
Sbjct: 129 ATD 131
>gi|255659147|ref|ZP_05404556.1| putative competence protein F [Mitsuokella multacida DSM 20544]
gi|260848597|gb|EEX68604.1| putative competence protein F [Mitsuokella multacida DSM 20544]
Length = 218
Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 21/90 (23%), Gaps = 15/90 (16%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
+ + L ++P CP+ + C C + I
Sbjct: 3 RGLWQMLVDFVFPPHCPVCHAYVEHLGAWCPDCMAAAQ-----------KPHVILLPAAM 51
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
R Y L+ LKY
Sbjct: 52 QPLIGTAWALGR----YHGGLRSLIHALKY 77
>gi|291514884|emb|CBK64094.1| Predicted amidophosphoribosyltransferases [Alistipes shahii WAL
8301]
Length = 240
Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 11/116 (9%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
+ ++ ++ ++P C + + +C C L D
Sbjct: 2 SILNDLVRDVASLLFPPRCAVCGEPLTRGERTVCTLC--------RATAPLTGYWREADN 53
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
++ +P+ Q + S L+ KY A M W R L +
Sbjct: 54 PVVRRCWGMVPVCQASGFLFFVRASGWRRLIHGFKYRGAWRTAREMGAWYGRYLRE 109
>gi|53718089|ref|YP_107075.1| hypothetical protein BPSL0450 [Burkholderia pseudomallei K96243]
gi|52208503|emb|CAH34438.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
Length = 242
Score = 40.7 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 13/120 (10%), Positives = 31/120 (25%), Gaps = 7/120 (5%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHILKNN 58
+ ++ P+ C + + +C C W++ L
Sbjct: 1 MAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPLPGA 58
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ + P ++ Y L LK+ + L + + R+
Sbjct: 59 RGATRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARLATD 118
>gi|255533737|ref|YP_003094109.1| phosphoribosyltransferase [Pedobacter heparinus DSM 2366]
gi|255346721|gb|ACU06047.1| phosphoribosyltransferase [Pedobacter heparinus DSM 2366]
Length = 232
Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 11/100 (11%)
Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+K I+ +LF ++PS+C + LC C + + + +
Sbjct: 4 LKRILGDLFSLLFPSLCCGCGTDLYTGEQLLCTECLYNL--------PYTDYHLHTENKA 55
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCV--LVRLLKYHDRTDL 104
K + LP + S+ + + L+ LKY R DL
Sbjct: 56 AKQLWGRLPCNAVMSLFYFKKGARTQNLIHNLKYKGRKDL 95
>gi|331084363|ref|ZP_08333467.1| hypothetical protein HMPREF0992_02391 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330401627|gb|EGG81208.1| hypothetical protein HMPREF0992_02391 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 234
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 2/91 (2%)
Query: 15 LFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNK-DNIDKDPLKSMQK 72
+YP CP+ I +C C K+ I + +++ K +K
Sbjct: 6 FLDILYPRHCPVCHEITVPWGRKICDTCKDKLKPIYGARCFCCSKPLQRAEQEYCKDCRK 65
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
Q + Y + + LKY R +
Sbjct: 66 TRQFQQGLGIFSYSTLLQNSLFQLKYGKRQE 96
>gi|284048801|ref|YP_003399140.1| competence protein F [Acidaminococcus fermentans DSM 20731]
gi|283953022|gb|ADB47825.1| competence protein F [Acidaminococcus fermentans DSM 20731]
Length = 224
Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 16/105 (15%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
S + L YP CP + LCG C KI + + + L
Sbjct: 4 SFVRLLQSLFYPHGCPGCGEEVREPGVLCGRCREKI-----------WHPRSFHPESLGC 52
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA-QWMF 113
D + Y + + K+ R DL + +W+
Sbjct: 53 PHVDGLFF----LLDYAGAIQKALWMAKFRGREDLLPRLGEEWLQ 93
>gi|117924701|ref|YP_865318.1| phosphoribosyltransferase [Magnetococcus sp. MC-1]
gi|117608457|gb|ABK43912.1| phosphoribosyltransferase [Magnetococcus sp. MC-1]
Length = 242
Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 3/99 (3%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK--DPLKSMQKDLPLTQIRS 81
CP+ + ++ LC CW + +++ + + + +
Sbjct: 15 CPLCGVDVGDKYSLCQGCWLSLPTLSSQLCGRCGEEVTMSLANGCGHCQGVGVMQDRTLC 74
Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQW-MFRVLEKI 119
Y +L+ K+ D++ M A W R+ ++
Sbjct: 75 AFPYEPPISLLLLGAKFADKSRWGAMAAHWGWARLGREL 113
>gi|53724518|ref|YP_104676.1| ComF family protein [Burkholderia mallei ATCC 23344]
gi|52427941|gb|AAU48534.1| ComF family protein [Burkholderia mallei ATCC 23344]
Length = 242
Score = 40.7 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 13/120 (10%), Positives = 32/120 (26%), Gaps = 7/120 (5%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHILKNN 58
+ ++ P+ C + + +C C W++ L
Sbjct: 1 MAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPLPGA 58
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ + + P ++ Y L LK+ + L + + R+
Sbjct: 59 RGAMRFHCGACAKVPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARLATD 118
>gi|238019432|ref|ZP_04599858.1| hypothetical protein VEIDISOL_01301 [Veillonella dispar ATCC
17748]
gi|237864131|gb|EEP65421.1| hypothetical protein VEIDISOL_01301 [Veillonella dispar ATCC
17748]
Length = 231
Score = 40.7 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 17/40 (42%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH 53
L+ ++P +CP + + C C++ + I H
Sbjct: 2 SLWDFLFPPVCPHCGASVATQGDWCETCFNDLLHIRHVPH 41
>gi|229521793|ref|ZP_04411211.1| hypothetical protein VIF_002329 [Vibrio cholerae TM 11079-80]
gi|229341387|gb|EEO06391.1| hypothetical protein VIF_002329 [Vibrio cholerae TM 11079-80]
Length = 286
Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y +V LKY
Sbjct: 122 RKLMCVGDYRFPLSDVVHQLKYQ 144
>gi|190576253|ref|YP_001974098.1| hypothetical protein Smlt4454 [Stenotrophomonas maltophilia K279a]
gi|190014175|emb|CAQ47819.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 229
Score = 40.7 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 6/118 (5%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-ILKNNK 59
MPA+ ++ + ++ + P C + + LC C++++ +
Sbjct: 1 MPALFKSTR-LLQAALRVVLPLRCLVCGEPGHDELDLCRACFAELPWAGRACLRCALPLP 59
Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRV 115
+N + P + LY L+ K+H DLA ++AQ M R
Sbjct: 60 ENALIVCGICRDEVPPQAATHASLLYLPPVDQLLVRYKFH--QDLAAGRLLAQLMQRA 115
>gi|312174099|emb|CBX82352.1| Competence protein F [Erwinia amylovora ATCC BAA-2158]
Length = 237
Score = 40.7 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQ 78
P C + + + LC C ++ + + +++ P +
Sbjct: 15 PPGCWLCAMPLAFAIHGLCSVCLRQL-LVHPACCPRCGLPAGCSTHQCGRCLRRPPPWQR 73
Query: 79 IRSVTLYCDMSCVLVRLLKY 98
+ +V+ + LV LK+
Sbjct: 74 LIAVSAWQPPLSQLVNRLKF 93
>gi|238023027|ref|ZP_04603453.1| hypothetical protein GCWU000324_02949 [Kingella oralis ATCC 51147]
gi|237865410|gb|EEP66550.1| hypothetical protein GCWU000324_02949 [Kingella oralis ATCC 51147]
Length = 249
Score = 40.7 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 26/93 (27%), Gaps = 6/93 (6%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFI---TATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
C I I LC C S++ + T + P +
Sbjct: 33 CLICHDI--QDNALCPACQSELRRLFPDTRHLCPRCGEASLHQALCGNCQRHPPPYSAFW 90
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y L+ K+H L + A W+
Sbjct: 91 ACAEYAAPIPALLHAWKHHGNRHLTPVFA-WLL 122
>gi|302671946|ref|YP_003831906.1| comF family protein [Butyrivibrio proteoclasticus B316]
gi|302396419|gb|ADL35324.1| comF family protein [Butyrivibrio proteoclasticus B316]
Length = 256
Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 35/121 (28%), Gaps = 15/121 (12%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRI----------INLRFCLCGHCWSKIHFITA 50
+ ++ + ++ IYP CP+ + I + C KI +I
Sbjct: 2 LQSVSDSFTEVVYGAIRLIYPRHCPVCDGLLPWAEIENGKIIKGRLIHKSCAGKIRYIRG 61
Query: 51 TEHILKNNKDNIDKD----PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAI 106
+ ++ + SV Y +S + KY R + A
Sbjct: 62 ATCMKCGKPLGKSDKENEYCSDCIRVHHVFDRGYSVFDYRSISGS-IYKFKYMGRQEYAT 120
Query: 107 M 107
Sbjct: 121 F 121
>gi|299144700|ref|ZP_07037768.1| competence protein [Bacteroides sp. 3_1_23]
gi|298515191|gb|EFI39072.1| competence protein [Bacteroides sp. 3_1_23]
Length = 234
Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ ++P C + R + C+C C N D +
Sbjct: 11 LSSFLSLLFPRCCVVCDRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+PL + S Y S +++ LKY + ++ +M ++M
Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107
>gi|298480136|ref|ZP_06998335.1| competence protein [Bacteroides sp. D22]
gi|298273945|gb|EFI15507.1| competence protein [Bacteroides sp. D22]
Length = 234
Score = 40.7 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ ++P C + R + C+C C N D +
Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+PL + S Y S +++ LKY + ++ ++M ++M
Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGVIMGRYMA 107
>gi|88811929|ref|ZP_01127182.1| competence protein F [Nitrococcus mobilis Nb-231]
gi|88790813|gb|EAR21927.1| competence protein F [Nitrococcus mobilis Nb-231]
Length = 219
Score = 40.7 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITA--TEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
C + LC C +++ ++ A + L ++ ++ P +R
Sbjct: 2 RCRFCAAPGVNGLELCEPCAAELPWLDAQCRQCALPLTDTGEERLCGGCLRHPPPFRHVR 61
Query: 81 SVTLYCDMSCVLVRLLKYH 99
+ YC L++ LKY
Sbjct: 62 APFRYCHPIDALLKALKYG 80
>gi|113866369|ref|YP_724858.1| amidophosphoribosyltransferase [Ralstonia eutropha H16]
gi|113525145|emb|CAJ91490.1| predicted amidophosphoribosyltransferase [Ralstonia eutropha H16]
Length = 285
Score = 40.7 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 27/99 (27%), Gaps = 6/99 (6%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
PS C + + R +C C + + Q
Sbjct: 67 PSACALCGAV--QRQVVCAPCAADLLRPVRR-CPACALAQGRHFHCPACAASPPAYDQAH 123
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++ Y LV LK+ LA +A R+ +
Sbjct: 124 TLGDYASPQDQLVLALKFGHALPLAGWLA---ARLAAGL 159
>gi|237718860|ref|ZP_04549341.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293371903|ref|ZP_06618307.1| ComF family protein [Bacteroides ovatus SD CMC 3f]
gi|229451992|gb|EEO57783.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292633149|gb|EFF51726.1| ComF family protein [Bacteroides ovatus SD CMC 3f]
Length = 234
Score = 40.7 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ ++P C + R + C+C C N D +
Sbjct: 11 LSSFLSLLFPRCCVVCDRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+PL + S Y S +++ LKY + ++ +M ++M
Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107
>gi|186475042|ref|YP_001856512.1| putative competence protein F-like protein [Burkholderia phymatum
STM815]
gi|184191501|gb|ACC69466.1| putative competence protein F-related protein [Burkholderia
phymatum STM815]
Length = 268
Score = 40.7 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 33/117 (28%), Gaps = 9/117 (7%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEH 53
+ + + S L H P+ C + + LC C W++ + A
Sbjct: 22 VSGVARRSVSAWPALAHLALPNSCALCGNM--SHQTLCCFCDEAWWNQARLRCTVCAVPL 79
Query: 54 ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + ++ Y L LK+ R LA A+
Sbjct: 80 SGFRRASLMHYRCGDCLATPPAFDATVALADYRAPLDALAVGLKFRARLALANEFAR 136
>gi|294648140|ref|ZP_06725683.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
gi|292636524|gb|EFF54999.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
Length = 149
Score = 40.7 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ ++P C + R + C+C C N D +
Sbjct: 11 LSSFLSLLFPRCCVVCGRPLAKGEECICTVC--------NINLPRTNYHLRKDNPVERLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+PL + S Y S +++ LKY + ++ +M ++M
Sbjct: 63 WGQIPLERATSFFFYEKGSDFRLILHRLKYGGQKEIGAIMGRYMA 107
>gi|114778949|ref|ZP_01453740.1| hypothetical protein SPV1_10341 [Mariprofundus ferrooxydans PV-1]
gi|114550821|gb|EAU53389.1| hypothetical protein SPV1_10341 [Mariprofundus ferrooxydans PV-1]
Length = 258
Score = 40.3 bits (93), Expect = 0.080, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 5/85 (5%)
Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK----DNIDKDPLKSMQK 72
H ++P C + ++ C C +I I L+ +
Sbjct: 24 HLLFPPGCLFCRKALDESDGCCPDCLQEI-LIWPASTCLRCGSMLPLALAPGPCGHCLHH 82
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLK 97
Q S+ Y + K
Sbjct: 83 PPAQQQTHSLYQYHGPVRDAILNWK 107
>gi|152980936|ref|YP_001354845.1| Comf family protein [Janthinobacterium sp. Marseille]
gi|151281013|gb|ABR89423.1| Comf family protein [Janthinobacterium sp. Marseille]
Length = 217
Score = 40.3 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 8/100 (8%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-----PLKSMQKDLP 75
P+ C + S I LC C F + + ++
Sbjct: 21 PTSCALCS--IPGTSALCAPC-RGQFFSRRPPRCTQCAYPLTHGEHARSFCGNCLRTPRA 77
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
Y LV LK+ ++ LA + AQ +
Sbjct: 78 FDATIVAGDYSAPIDHLVLALKFGNQLALAPLFAQLIVDA 117
>gi|292489915|ref|YP_003532805.1| competence protein F [Erwinia amylovora CFBP1430]
gi|291555352|emb|CBA23721.1| Competence protein F [Erwinia amylovora CFBP1430]
Length = 237
Score = 40.3 bits (93), Expect = 0.084, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQ 78
P C + + + LC C ++ + + + +++ P +
Sbjct: 15 PPGCWLCAMPLAFAIHGLCSVCLRQL-LVHPACCPRCGLPAGCSRHQCGRCLRRPPPWQR 73
Query: 79 IRSVTLYCDMSCVLVRLLKY 98
+ +V+ + LV LK+
Sbjct: 74 LIAVSAWQPPLSQLVNRLKF 93
>gi|256005256|ref|ZP_05430223.1| phosphoribosyltransferase [Clostridium thermocellum DSM 2360]
gi|255990807|gb|EEU00922.1| phosphoribosyltransferase [Clostridium thermocellum DSM 2360]
gi|316941867|gb|ADU75901.1| phosphoribosyltransferase [Clostridium thermocellum DSM 1313]
Length = 220
Score = 40.3 bits (93), Expect = 0.084, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 37/111 (33%), Gaps = 16/111 (14%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
++ + + I+P C I+ +C C+ KI F + + D
Sbjct: 1 MVNWIINLIFPPKCIFCGTILGTNTKIEICKECYEKIDFKEGASISFQGQYNYYDSVVCV 60
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Y + +R K++++ A+ + + ++++
Sbjct: 61 C--------------DYSGIVKEAIRKYKFYNKPSYYRTFARLLAQKIKEL 97
>gi|125974733|ref|YP_001038643.1| phosphoribosyltransferase [Clostridium thermocellum ATCC 27405]
gi|281418798|ref|ZP_06249817.1| phosphoribosyltransferase [Clostridium thermocellum JW20]
gi|125714958|gb|ABN53450.1| phosphoribosyltransferase [Clostridium thermocellum ATCC 27405]
gi|281407882|gb|EFB38141.1| phosphoribosyltransferase [Clostridium thermocellum JW20]
Length = 220
Score = 40.3 bits (93), Expect = 0.084, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 37/111 (33%), Gaps = 16/111 (14%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
++ + + I+P C I+ +C C+ KI F + + D
Sbjct: 1 MVNWIINLIFPPKCIFCGTILGTNTKIEICKECYEKIDFKEGASISFQGQYNYYDSVVCV 60
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Y + +R K++++ A+ + + ++++
Sbjct: 61 C--------------DYSGIVKEAIRKYKFYNKPSYYRTFARLLAQKIKEL 97
>gi|295094194|emb|CBK83285.1| Predicted amidophosphoribosyltransferases [Coprococcus sp. ART55/1]
Length = 243
Score = 40.3 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 2/108 (1%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSM 70
L +YP C I ++ + L + + ++ ++ + + ++ L
Sbjct: 12 RLLTDLLYPRRCAICDEVLPMGEGLICRGHNSLPYVKTPSCMVCGKEVDSEERELCLDCE 71
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ + V Y + V +KYH++ + M +
Sbjct: 72 KHSRNFERGFPVFNYVEPVKASVLAIKYHNKKEYCDFYGAQMAEKVRP 119
>gi|269977980|ref|ZP_06184933.1| competence protein F [Mobiluncus mulieris 28-1]
gi|269933827|gb|EEZ90408.1| competence protein F [Mobiluncus mulieris 28-1]
Length = 245
Score = 40.3 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 29/97 (29%), Gaps = 21/97 (21%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+++ + +L + P+ C +C C ++I +D +
Sbjct: 19 LRAALTDLGGVLLPTECVGCGAW---DEMVCDRCLAQI----------LGEPQALDLE-- 63
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
+ +V Y V K+ R DL
Sbjct: 64 --LAGIPGF----AVANYEGAMRRFVLAGKHDPRLDL 94
>gi|313113645|ref|ZP_07799226.1| ComF family protein [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624013|gb|EFQ07387.1| ComF family protein [Faecalibacterium cf. prausnitzii KLE1255]
Length = 259
Score = 40.3 bits (93), Expect = 0.091, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 31/105 (29%), Gaps = 15/105 (14%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
+ I+ +YP CP R++ +C C +++ + + + +
Sbjct: 4 YSVPRRILRGARQLVYPRRCPFCDRVLGS-VPVCPDCAAELEKLRRKPGMRLDASQHYLG 62
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ + P Y + KYH A A
Sbjct: 63 ELTGAAA---PF-------RYEGCVRRGILHTKYH----AAPWAA 93
>gi|51891258|ref|YP_073949.1| putative competence protein ComF [Symbiobacterium thermophilum IAM
14863]
gi|51854947|dbj|BAD39105.1| putative competence protein ComF [Symbiobacterium thermophilum IAM
14863]
Length = 254
Score = 40.3 bits (93), Expect = 0.091, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 44/125 (35%), Gaps = 13/125 (10%)
Query: 8 VKSIIIELFHCIYP--SICPIYSRI----------INLRFCLCGHCWSKIHF-ITATEHI 54
+++I+ L ++P + C + +C CW+ + F + I
Sbjct: 5 LRTILEGLVTLLWPQRTTCITCDGPLPAPLPPLATVAETVPVCADCWAAMPFTLDMRLCI 64
Query: 55 LKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ ++ ++ L+ + V +K+ R L + +++ +
Sbjct: 65 NCSRPLRGGWGLCAECVITPSYGRVWALGLHRGVLRAAVHHVKFSGRQALGEALGRYLAQ 124
Query: 115 VLEKI 119
++E +
Sbjct: 125 MVEDL 129
>gi|237747426|ref|ZP_04577906.1| gntX protein [Oxalobacter formigenes HOxBLS]
gi|229378777|gb|EEO28868.1| gntX protein [Oxalobacter formigenes HOxBLS]
Length = 199
Score = 40.3 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 20/50 (40%)
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ ++ + Y LV LLK+ R LA +M + +++
Sbjct: 13 CGECLEHTPSFDETVVAVNYEPPLDQLVHLLKFQYRLALAPLMGKLIYQA 62
>gi|111115494|ref|YP_710112.1| hypothetical protein BAPKO_0705 [Borrelia afzelii PKo]
gi|216263580|ref|ZP_03435575.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
gi|110890768|gb|ABH01936.1| hypothetical protein BAPKO_0705 [Borrelia afzelii PKo]
gi|215980424|gb|EEC21245.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
Length = 118
Score = 40.3 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 7/82 (8%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77
C + L +C +C +K+ I + P
Sbjct: 10 CEQCGEKVGLNRTICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69
Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98
+ R+ + + L +
Sbjct: 70 RKERARMASDGVVSKVFIRLFH 91
>gi|269215689|ref|ZP_06159543.1| phosphoribosyltransferase [Slackia exigua ATCC 700122]
gi|269131176|gb|EEZ62251.1| phosphoribosyltransferase [Slackia exigua ATCC 700122]
Length = 264
Score = 40.3 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 36/119 (30%), Gaps = 10/119 (8%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDK 64
+ + S+ ++P+ C + C LC C S + I A +
Sbjct: 32 RMLASVAQAAIEMLWPTRCAAC----DAPGCVLCPACRSSLPCIDALNACPTCGDPHGRI 87
Query: 65 DPLKS-----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ D P+ + RS + +R K LAI A + +
Sbjct: 88 QCARCAMRSMAGSDAPVDECRSAARFEGGMARAMRAYKDQGEQRLAIPFALLIADATPE 146
>gi|258624641|ref|ZP_05719577.1| ComF-related protein [Vibrio mimicus VM603]
gi|258583105|gb|EEW07918.1| ComF-related protein [Vibrio mimicus VM603]
Length = 265
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRIIN--LRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + ++ F +C C W + + + +++ P
Sbjct: 45 PECHLCRLALDKNSPFGICTACQAWLE----HGYRCARCGLPTLTAVEQCGQCLRQPPPW 100
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 101 RKLICVGDYRFPLSDAVHQLKYQ 123
>gi|166714084|ref|ZP_02245291.1| competence protein F [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 219
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 8/102 (7%)
Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD---PLKSMQKDL 74
+ PS+C + + LC C + + + + + +Q+
Sbjct: 1 MLLPSLCLVCAEAGTADDDLCPACRAALP-DHGHACLCCAAQLFASDGVALCGQCLQEPP 59
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFR 114
PL ++ + Y L+R K+H DLA ++++ M R
Sbjct: 60 PLQRVHACFTYRWPVDGLLRRFKFH--QDLAAGRLLSELMAR 99
>gi|189501156|ref|YP_001960626.1| phosphoribosyltransferase [Chlorobium phaeobacteroides BS1]
gi|189496597|gb|ACE05145.1| phosphoribosyltransferase [Chlorobium phaeobacteroides BS1]
Length = 230
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 11/90 (12%)
Query: 14 ELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
++ H YP +CP + +C C I+A + + L
Sbjct: 6 DILHLFYPCVCPGCGSQLYADAEGICPEC------ISAFDAFGDADASGYAIMELFRRNY 59
Query: 73 DLPLTQIRSVTLYC----DMSCVLVRLLKY 98
++ LY D ++ +KY
Sbjct: 60 PDDTLSGKAWALYRFHKNDRLQRVIHAMKY 89
>gi|254225441|ref|ZP_04919052.1| ComF family protein [Vibrio cholerae V51]
gi|125622075|gb|EAZ50398.1| ComF family protein [Vibrio cholerae V51]
Length = 286
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLSQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144
>gi|291549967|emb|CBL26229.1| Predicted amidophosphoribosyltransferases [Ruminococcus torques
L2-14]
Length = 224
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATE--HILKNNKDNIDKDPLKSMQKDLPL 76
+YP CP I + +C C ++ + + H K +D + ++
Sbjct: 1 MYPKRCPFCQGISSK--GICDDCRKQVVKVGKIKCIHCGKPLEDETKEYCRDCERRKSNY 58
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
Q RS+ ++ V LKYH
Sbjct: 59 EQGRSLWVHIPPVSNSVYRLKYH 81
>gi|262402005|ref|ZP_06078570.1| predicted amidophosphoribosyltransferase [Vibrio sp. RC586]
gi|262351977|gb|EEZ01108.1| predicted amidophosphoribosyltransferase [Vibrio sp. RC586]
Length = 236
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 9/94 (9%)
Query: 22 SICPIYSRIIN--LRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + ++ F +C C W + + + +++ P
Sbjct: 16 PECHLCRLALDKNSPFGVCTACQAWLE----HGYRCACCGLPTLTPVEQCGQCLRQPPPW 71
Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
++ V Y V LKY + A +A
Sbjct: 72 RKLMCVGDYRFPLSDAVHQLKYQRQFWQAPRLAN 105
>gi|313903615|ref|ZP_07837005.1| phosphoribosyltransferase [Thermaerobacter subterraneus DSM 13965]
gi|313466168|gb|EFR61692.1| phosphoribosyltransferase [Thermaerobacter subterraneus DSM 13965]
Length = 288
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 7/101 (6%)
Query: 20 YPSICPIYSR----IINLRFCLCGHCWSKIHFITATEHILKNNKDNI---DKDPLKSMQK 72
+P C +C C +++ + + + + D+ +
Sbjct: 44 WPPYCLGCGADLPHWPPADPAICPRCQARLGHEPGSRCLWCDRPAWLAHPDEPCSQCRTL 103
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
P +R+V Y + L+ +KY D LA ++ + M
Sbjct: 104 GPPWVAVRAVGTYRGLLRRLILRMKYEDEPYLAELLGRAMA 144
>gi|284040351|ref|YP_003390281.1| phosphoribosyltransferase [Spirosoma linguale DSM 74]
gi|283819644|gb|ADB41482.1| phosphoribosyltransferase [Spirosoma linguale DSM 74]
Length = 239
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+Q + + + +YP++C ++ + LC C +I+ +H + + ++
Sbjct: 5 VQRIYLLFADFVDLLYPTLCVGCAKSLGFNERVLCTKC--RINLPETYQHREPYDDNLLN 62
Query: 64 KDPLKSMQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQW 111
K K + + +Y + L+ +KY + ++A + W
Sbjct: 63 KFAGKVPA------RFVTSFVYFKKGGIVQKLIHKIKYKGQKEVAKEIGCW 107
>gi|60683607|ref|YP_213751.1| amidophosphoribosyl-transferase [Bacteroides fragilis NCTC 9343]
gi|253566520|ref|ZP_04843973.1| amidophosphoribosyl-transferase [Bacteroides sp. 3_2_5]
gi|265767387|ref|ZP_06095053.1| amidophosphoribosyl-transferase [Bacteroides sp. 2_1_16]
gi|60495041|emb|CAH09859.1| possible amidophosphoribosyl-transferase [Bacteroides fragilis NCTC
9343]
gi|251944692|gb|EES85167.1| amidophosphoribosyl-transferase [Bacteroides sp. 3_2_5]
gi|263252692|gb|EEZ24204.1| amidophosphoribosyl-transferase [Bacteroides sp. 2_1_16]
gi|301165122|emb|CBW24690.1| possible amidophosphoribosyl-transferase [Bacteroides fragilis
638R]
Length = 230
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 16/106 (15%)
Query: 14 ELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSM- 70
+ ++P C + ++ CLC C L ++ KD P++ +
Sbjct: 7 SFWSLLFPRCCVVCGAPLSKEEECLCIRC----------NMNLPRTGFHLRKDNPVECLF 56
Query: 71 -QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+ L + S Y S ++ LLKY +L +M ++M
Sbjct: 57 WGRIPVLERASSFLFYRKGSDFRRILHLLKYSGYKELGEVMGRYMA 102
>gi|292900950|ref|YP_003540319.1| competence protein [Erwinia amylovora ATCC 49946]
gi|291200798|emb|CBJ47932.1| putative competence protein [Erwinia amylovora ATCC 49946]
Length = 227
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQ 78
P C + + + LC C ++ + + + +++ P +
Sbjct: 5 PPGCWLCAMPLAFAIHGLCSVCLRQL-LVHPACCPRCGLPAGCSRHQCGRCLRRPPPWQR 63
Query: 79 IRSVTLYCDMSCVLVRLLKY 98
+ +V+ + LV LK+
Sbjct: 64 LIAVSAWQPPLSQLVNRLKF 83
>gi|257790964|ref|YP_003181570.1| hypothetical protein Elen_1211 [Eggerthella lenta DSM 2243]
gi|257474861|gb|ACV55181.1| conserved hypothetical protein [Eggerthella lenta DSM 2243]
Length = 274
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 31/113 (27%), Gaps = 11/113 (9%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
+ + ++P+ C + LC C + I + +
Sbjct: 41 RGAAEAIAETLWPTRCAVCDTPGE---VLCAPCSLNLSHIDWWRACPRCGAPFGRVQCSE 97
Query: 69 S--------MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + P S + D + +VR K LA MA M
Sbjct: 98 CNDVLMSVAGRDEPPFDACTSAVAFDDAAARIVRTWKDAGERRLAGAMATLMA 150
>gi|307701165|ref|ZP_07638187.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
gi|307613559|gb|EFN92806.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
Length = 245
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 29/97 (29%), Gaps = 21/97 (21%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+++ + +L + P+ C +C C ++I +D +
Sbjct: 19 LRAALTDLGGVLLPTECVGCGAW---DEMVCDRCLAQI----------LGEPQVLDLE-- 63
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
+ +V Y V K+ R DL
Sbjct: 64 --LAGIPGF----AVANYEGAMRRFVLAGKHDPRLDL 94
>gi|325830868|ref|ZP_08164252.1| comF family protein [Eggerthella sp. HGA1]
gi|325487275|gb|EGC89718.1| comF family protein [Eggerthella sp. HGA1]
Length = 274
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 31/113 (27%), Gaps = 11/113 (9%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
+ + ++P+ C + LC C + I + +
Sbjct: 41 RGAAEAIAETLWPTRCAVCDTPGE---VLCAPCSLNLSHIDWWRACPRCGAPFGRVQCSE 97
Query: 69 S--------MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + P S + D + +VR K LA MA M
Sbjct: 98 CNDVLMSVAGRDEPPFDACASAVAFDDAAARIVRTWKDAGERRLAGAMATLMA 150
>gi|53715668|ref|YP_101660.1| putative amidophosphoribosyl-transferase [Bacteroides fragilis
YCH46]
gi|52218533|dbj|BAD51126.1| putative amidophosphoribosyl-transferase [Bacteroides fragilis
YCH46]
Length = 230
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 16/106 (15%)
Query: 14 ELFHCIYPSICPIYSRIINLRF-CLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSM- 70
+ ++P C + ++ CLC C L ++ KD P++ +
Sbjct: 7 SFWSLLFPRCCVVCGAPLSKEEECLCIRC----------NMNLPRTGFHLRKDNPVECLF 56
Query: 71 -QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+ L + S Y S ++ LLKY +L +M ++M
Sbjct: 57 WGRIPVLERASSFLFYRKGSDFRRILHLLKYSGYKELGEVMGRYMA 102
>gi|212702061|ref|ZP_03310189.1| hypothetical protein DESPIG_00063 [Desulfovibrio piger ATCC 29098]
gi|212674576|gb|EEB35059.1| hypothetical protein DESPIG_00063 [Desulfovibrio piger ATCC 29098]
Length = 186
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 17/65 (26%)
Query: 52 EHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111
L + + P + Y L+ K+ + LA +MA
Sbjct: 1 GLPLPWPAAGQPLLCGECLASPPPWQGLALHGQYRGALRQLILRFKHGGKPALAFLMAGM 60
Query: 112 MFRVL 116
+
Sbjct: 61 LLDAA 65
>gi|323524636|ref|YP_004226789.1| phosphoribosyltransferase [Burkholderia sp. CCGE1001]
gi|323381638|gb|ADX53729.1| phosphoribosyltransferase [Burkholderia sp. CCGE1001]
Length = 261
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 37/121 (30%), Gaps = 9/121 (7%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKN 57
+ ++S + P+ C + + LC C W+ + A +
Sbjct: 18 ARGLESAWPRTLQAVLPNACTLCGNL--SHNPLCTFCDESYWNDGALRCDVCAVPLPVTF 75
Query: 58 NKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ + P ++ Y L LK+ + LA A+ + R+ E
Sbjct: 76 RGRRASYRCADCIAEKPPFDATFALADYRAPLDTLAVGLKFRAQLMLAREFARRLARLAE 135
Query: 118 K 118
Sbjct: 136 D 136
>gi|307565024|ref|ZP_07627541.1| ComF family protein [Prevotella amnii CRIS 21A-A]
gi|307346337|gb|EFN91657.1| ComF family protein [Prevotella amnii CRIS 21A-A]
Length = 234
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 10/94 (10%)
Query: 14 ELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
+ I P C + + ++ +C C +HF T + L D + +
Sbjct: 10 SIIDLIAPRECCVCKKRLSLSEDVICATC--TLHF-NRTNYYLSP----YDNELARCFWG 62
Query: 73 DLPLTQIRSVTLYCDMSC--VLVRLLKYHDRTDL 104
+P+ + + Y + + LKY DR D+
Sbjct: 63 KIPIERCVAYLFYQHHTQISNAIYALKYGDRPDI 96
>gi|50954328|ref|YP_061616.1| competence protein F [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50950810|gb|AAT88511.1| competence protein F [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 249
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 23/109 (21%)
Query: 2 PAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61
P ++ +S +++ + P +C C +
Sbjct: 9 PVLLSLARSALLDAAGVLLPVRGAGCGA---GDRSVCSVC-----------------ERA 48
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + + LP I S Y + ++ K DRTD A +A+
Sbjct: 49 LSPEVAANAFSGLP---IWSALRYDGAARRILLAFKDGDRTDAATFLAR 94
>gi|262170349|ref|ZP_06038027.1| predicted amidophosphoribosyltransferase [Vibrio mimicus MB-451]
gi|261891425|gb|EEY37411.1| predicted amidophosphoribosyltransferase [Vibrio mimicus MB-451]
Length = 236
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRIIN--LRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + ++ F +C C W + + + +++ P
Sbjct: 16 PECHLCRLALDKNSPFGICTACQAWLE----HGYRCARCGLPTLTAVEQCGQCLRQPPPW 71
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 72 RKLICVGDYRFPLSDAVHQLKYQ 94
>gi|115352956|ref|YP_774795.1| phosphoribosyltransferase [Burkholderia ambifaria AMMD]
gi|115282944|gb|ABI88461.1| phosphoribosyltransferase [Burkholderia ambifaria AMMD]
Length = 270
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 22/134 (16%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF--------- 47
M ++ V+++ + + P+ C + + +C C W++
Sbjct: 10 MRVVLSRVRALAVRVVALALPNRCALCGNL--SHAVICSACDAAYWNEARLRCDVCAVPL 67
Query: 48 ------ITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101
+ + P ++ Y L R LK+H R
Sbjct: 68 GSGRPRPRGSRGRHAGVAASFAYRCDACRATPPPFDATLALADYRAPLDGLARGLKFHAR 127
Query: 102 TDL-AIMMAQWMFR 114
L A A+ R
Sbjct: 128 LALGAEFAARLAQR 141
>gi|304383729|ref|ZP_07366188.1| competence protein [Prevotella marshii DSM 16973]
gi|304335253|gb|EFM01524.1| competence protein [Prevotella marshii DSM 16973]
Length = 235
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 7 TVKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
T+ + LF I P +C I R+ LC C++ + T + ++ D +
Sbjct: 4 TINRFLRSLFDAISPRVCVICGRRLTIDEEVLCIPCYANLP---RTWY----DERAEDNE 56
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
+ +P+ + ++ Y S L+ ++KY + + A + + M
Sbjct: 57 LARLFWGRVPIERAVALCFYQSHSYFSRLIYMMKYKNHPEAARYLGRIMA 106
>gi|262166728|ref|ZP_06034465.1| predicted amidophosphoribosyltransferase [Vibrio mimicus VM223]
gi|262026444|gb|EEY45112.1| predicted amidophosphoribosyltransferase [Vibrio mimicus VM223]
Length = 265
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRII--NLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + + F +C C W + + + +++ P
Sbjct: 45 PECHLCRLALDKETPFGVCTACQAWLE----HGYRCARCGLPTLTAVEQCGQCLRQPPPW 100
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 101 RKLICVGDYRFPLSDAVHQLKYQ 123
>gi|172061808|ref|YP_001809460.1| phosphoribosyltransferase [Burkholderia ambifaria MC40-6]
gi|171994325|gb|ACB65244.1| phosphoribosyltransferase [Burkholderia ambifaria MC40-6]
Length = 270
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 22/134 (16%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF--------- 47
M ++ V+++ + + P+ C + + +C C W++
Sbjct: 10 MRVVLSQVRALAVRVVALALPNRCALCGNL--SHAVICSACDAAYWNEARLRCDVCAVPL 67
Query: 48 ------ITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101
+ + P ++ Y L R LK+H R
Sbjct: 68 GSGRPRPRGSRGRYAGAAASFAYRCDACRATPPPFDATLALADYRAPLDGLARGLKFHAR 127
Query: 102 TDL-AIMMAQWMFR 114
L A A+ R
Sbjct: 128 LALGAEFAARLAQR 141
>gi|28493096|ref|NP_787257.1| comF operon protein 3 [Tropheryma whipplei str. Twist]
gi|28476136|gb|AAO44226.1| comF operon protein 3 [Tropheryma whipplei str. Twist]
Length = 254
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 23/106 (21%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
I+ + + E+ + YP+ CP LC C++++ D I
Sbjct: 13 IVNRLGMLTREMSNLFYPTSCPCCGM---QDTTLCDLCFARLA--ERPYRESLAGLDVI- 66
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
S Y + + K R LA M
Sbjct: 67 -----------------SCCDYTPAARAFITAYKVMKRMTLAKFMG 95
>gi|315225633|ref|ZP_07867442.1| phosphoribosyltransferase family protein [Capnocytophaga ochracea
F0287]
gi|314944450|gb|EFS96490.1| phosphoribosyltransferase family protein [Capnocytophaga ochracea
F0287]
Length = 229
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 13/106 (12%)
Query: 11 IIIELFHCIYPSICPIYSRI-INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
I+ ++ + P+ C ++ I LC +C K+ T L+ + +
Sbjct: 2 ILSDILSVLSPAYCRGCGKLLITGEQFLCVNCREKL---EETNFHLQAENLFTQRLTEEC 58
Query: 70 MQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ Y +M+ L+ LKY + + QW+
Sbjct: 59 EVF------AATALFYFKKDNMAQHLIHSLKYKGDEQIGEWLGQWL 98
>gi|153817457|ref|ZP_01970124.1| ComF family protein [Vibrio cholerae NCTC 8457]
gi|126512043|gb|EAZ74637.1| ComF family protein [Vibrio cholerae NCTC 8457]
Length = 236
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 16 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 71
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 72 RKLMCVGDYRFPLSDAVHQLKYQ 94
>gi|317049908|ref|YP_004117556.1| phosphoribosyltransferase [Pantoea sp. At-9b]
gi|316951525|gb|ADU71000.1| phosphoribosyltransferase [Pantoea sp. At-9b]
Length = 225
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
P++C + + + LC C ++ I D+ + +Q+ P Q+
Sbjct: 5 PALCWLCRLPLRLAQHGLCSSCLRQLPRI-PERCPCCGLPARADRVCGRCLQRPPPWQQL 63
Query: 80 RSVTLYCDMSCVLVRLLKY 98
V+ Y V LK+
Sbjct: 64 ICVSDYLPPLSHWVNQLKF 82
>gi|251793450|ref|YP_003008179.1| protein GntX [Aggregatibacter aphrophilus NJ8700]
gi|247534846|gb|ACS98092.1| protein GntX [Aggregatibacter aphrophilus NJ8700]
Length = 228
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 12/98 (12%)
Query: 19 IYPSICPIYSRIIN-LRFCLCGHCWSKI-HFITATEHILKNNKDNID-KDPLKSMQKDLP 75
++ S C + + LC C I F + + +Q++
Sbjct: 3 VFQSNCVHCHAPLKLAKHGLCSRCNRSIWRF---PYCGCCGAELTENALHCGNCLQQEPA 59
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYH-----DRTDLAIMM 108
++ + Y + L+ K+ DRT LA ++
Sbjct: 60 WDRMVIIGRYNEPLSTLIHRFKFQKQFWLDRT-LARLL 96
>gi|146329020|ref|YP_001209376.1| hypothetical protein DNO_0464 [Dichelobacter nodosus VCS1703A]
gi|146232490|gb|ABQ13468.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
Length = 233
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 5/97 (5%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLT 77
+P C + +I + LC C S I + + + +
Sbjct: 14 FFPRHCLLCRKICSDW--LCVDCQSLWQPIVTPHCQTCAARVAQNHRFCQRCARHSPAFD 71
Query: 78 QIRSVTLYCDMSCVLVRLLKY-HDRTDLAIMMAQWMF 113
+V Y + LV KY +RT L M + M
Sbjct: 72 AFTAVYRYNAPARTLVLQAKYAANRTALT-YMGEMMA 107
>gi|94985044|ref|YP_604408.1| competence protein ComF, putative [Deinococcus geothermalis DSM
11300]
gi|94555325|gb|ABF45239.1| competence protein ComF, putative [Deinococcus geothermalis DSM
11300]
Length = 207
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 33/113 (29%), Gaps = 25/113 (22%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
+ + P CP + LC C +++ L
Sbjct: 1 MQDFLRAFLPRRCPGCDGQLGREAGLCAGCRAQLRPRVERYSPL---------------- 44
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM---------AQWMFRV 115
P + ++ Y ++ VR LK+ +LA ++ A W R
Sbjct: 45 SPRPQGHLVTLGPYRGVTRRAVRALKFGGARELAEVLGAVLAAGIPAVWGVRA 97
>gi|254285914|ref|ZP_04960876.1| ComF family protein [Vibrio cholerae AM-19226]
gi|150424096|gb|EDN16035.1| ComF family protein [Vibrio cholerae AM-19226]
Length = 286
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + +++ P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLRQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 122 RKLMCVGDYRFPLSNAVHQLKYQ 144
>gi|297581558|ref|ZP_06943481.1| ComF family protein [Vibrio cholerae RC385]
gi|297534396|gb|EFH73234.1| ComF family protein [Vibrio cholerae RC385]
Length = 286
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 21/83 (25%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C N F +C C W + D + + + P
Sbjct: 66 PECHFCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144
>gi|15642713|ref|NP_232346.1| ComF-related protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121726721|ref|ZP_01679946.1| ComF family protein [Vibrio cholerae V52]
gi|147675590|ref|YP_001218207.1| ComF family protein [Vibrio cholerae O395]
gi|153821299|ref|ZP_01973966.1| ComF family protein [Vibrio cholerae B33]
gi|227082833|ref|YP_002811384.1| ComF-related protein [Vibrio cholerae M66-2]
gi|229507233|ref|ZP_04396738.1| hypothetical protein VCF_002456 [Vibrio cholerae BX 330286]
gi|229509846|ref|ZP_04399327.1| hypothetical protein VCE_001248 [Vibrio cholerae B33]
gi|229516967|ref|ZP_04406413.1| hypothetical protein VCC_000988 [Vibrio cholerae RC9]
gi|229606739|ref|YP_002877387.1| hypothetical protein VCD_001648 [Vibrio cholerae MJ-1236]
gi|254851255|ref|ZP_05240605.1| ComF family protein [Vibrio cholerae MO10]
gi|298500467|ref|ZP_07010271.1| ComF family protein [Vibrio cholerae MAK 757]
gi|9657316|gb|AAF95859.1| ComF-related protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121630882|gb|EAX63264.1| ComF family protein [Vibrio cholerae V52]
gi|126521231|gb|EAZ78454.1| ComF family protein [Vibrio cholerae B33]
gi|146317473|gb|ABQ22012.1| ComF family protein [Vibrio cholerae O395]
gi|227010721|gb|ACP06933.1| ComF-related protein [Vibrio cholerae M66-2]
gi|227014605|gb|ACP10815.1| ComF-related protein [Vibrio cholerae O395]
gi|229346030|gb|EEO11002.1| hypothetical protein VCC_000988 [Vibrio cholerae RC9]
gi|229353320|gb|EEO18259.1| hypothetical protein VCE_001248 [Vibrio cholerae B33]
gi|229354738|gb|EEO19659.1| hypothetical protein VCF_002456 [Vibrio cholerae BX 330286]
gi|229369394|gb|ACQ59817.1| hypothetical protein VCD_001648 [Vibrio cholerae MJ-1236]
gi|254846960|gb|EET25374.1| ComF family protein [Vibrio cholerae MO10]
gi|297540636|gb|EFH76693.1| ComF family protein [Vibrio cholerae MAK 757]
Length = 286
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144
>gi|291486098|dbj|BAI87173.1| competence protein FC [Bacillus subtilis subsp. natto BEST195]
Length = 240
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 18/95 (18%)
Query: 23 ICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKS- 69
IC + + +C C SK+ IT L ++
Sbjct: 13 ICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCE 72
Query: 70 -----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++ L L Q RSV Y DM + K+
Sbjct: 73 VWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFR 107
>gi|303229515|ref|ZP_07316303.1| hypothetical protein HMPREF9684_1843 [Veillonella atypica
ACS-134-V-Col7a]
gi|302515640|gb|EFL57594.1| hypothetical protein HMPREF9684_1843 [Veillonella atypica
ACS-134-V-Col7a]
Length = 241
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHC 41
LF ++P +CP + + C C
Sbjct: 3 LFDFLFPPVCPHCGTHVQQQGDWCDAC 29
>gi|303232073|ref|ZP_07318776.1| hypothetical protein HMPREF9321_0196 [Veillonella atypica
ACS-049-V-Sch6]
gi|302513179|gb|EFL55218.1| hypothetical protein HMPREF9321_0196 [Veillonella atypica
ACS-049-V-Sch6]
Length = 241
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHC 41
LF ++P +CP + + C C
Sbjct: 3 LFDFLFPPVCPHCGTHVQQQGDWCDAC 29
>gi|257465154|ref|ZP_05629525.1| competence protein F [Actinobacillus minor 202]
gi|257450814|gb|EEV24857.1| competence protein F [Actinobacillus minor 202]
Length = 229
Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 22/79 (27%), Gaps = 4/79 (5%)
Query: 23 ICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNI-DKDPLKSMQKDLPLTQIR 80
C R ++ C C +I T+ + ++ + +I
Sbjct: 7 RCFHCDRPLMIASHGFCSQCIKEIT--TSPYCGHCGAALAENSLSCGECLRSEPKWQRIV 64
Query: 81 SVTLYCDMSCVLVRLLKYH 99
+ LY + K+
Sbjct: 65 QIALYKAPLADWIHRFKFQ 83
>gi|257440338|ref|ZP_05616093.1| competence protein F-related protein [Faecalibacterium prausnitzii
A2-165]
gi|257197184|gb|EEU95468.1| competence protein F-related protein [Faecalibacterium prausnitzii
A2-165]
Length = 259
Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 29/105 (27%), Gaps = 15/105 (14%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
+ + +L +YP CP R++ + C C + + + ++
Sbjct: 4 YSGLSRTLRQLRWVLYPRRCPFCDRVLGNQPA-CPDCADGLAELRRAPSMRLRGSEHYLG 62
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ P Y + V KY A A
Sbjct: 63 RLDGAAA---PY-------RYTGLVRRAVLRAKYQG----APWAA 93
>gi|167760014|ref|ZP_02432141.1| hypothetical protein CLOSCI_02386 [Clostridium scindens ATCC 35704]
gi|167662307|gb|EDS06437.1| hypothetical protein CLOSCI_02386 [Clostridium scindens ATCC 35704]
Length = 240
Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIH--FITATEH--ILKNNKDNID 63
++ I ++P ICP + +CG C ++ I K
Sbjct: 4 LRKIYETALRWLWPEICPFCGK--ASSRGICGVCRKELEKLKIQEPRCKRCGKPIARMEK 61
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ ++ L+ + KYH++ + I A+ M
Sbjct: 62 EYCHDCSHTHHHYDSGLALWLHGKPVSTSIYQFKYHNQRNFGIWYAREMA 111
>gi|153854474|ref|ZP_01995752.1| hypothetical protein DORLON_01747 [Dorea longicatena DSM 13814]
gi|149753000|gb|EDM62931.1| hypothetical protein DORLON_01747 [Dorea longicatena DSM 13814]
Length = 242
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 30/95 (31%), Gaps = 6/95 (6%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT-ATEHILKNNKDNIDKD-- 65
I + ++P +CP ++ +C C K+ + ++ K +
Sbjct: 7 NKIKESIISLLWPEVCPFCQKVCRD--GICKECRKKLELVKVREPRCMQCGKQIRSVEQE 64
Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
M + S+ + + V KYH
Sbjct: 65 YCYDCMHTHHYYERGLSLWNHKNPVNQSVYQFKYH 99
>gi|283780134|ref|YP_003370889.1| amidophosphoribosyltransferase-like protein [Pirellula staleyi DSM
6068]
gi|283438587|gb|ADB17029.1| amidophosphoribosyltransferase-like protein [Pirellula staleyi DSM
6068]
Length = 254
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 23/97 (23%), Gaps = 6/97 (6%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFC--LCGHCWSKIHFITATEHILKNNKDNI--- 62
++ ++P C + LC C + I T +
Sbjct: 6 ASRLVTAATDLLFPPTCAACQADLATPHGVLLCSSCEATIRSDTLPRCLRCAMPCRTILQ 65
Query: 63 -DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ LP + Y +V KY
Sbjct: 66 SSVGCSHCREMKLPFAAAAVLGNYDTSLRAVVIRAKY 102
>gi|241760595|ref|ZP_04758687.1| competence protein [Neisseria flavescens SK114]
gi|241318776|gb|EER55302.1| competence protein [Neisseria flavescens SK114]
Length = 238
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 5/93 (5%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIH--FITAT-EHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + ++ LC C + + FI A L +K ++
Sbjct: 17 RCVLCHDSVSD--GLCRGCANDLTEYFIDAAQSCPLCFRHVAGGAVCGSCQKKPPAFDRM 74
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ Y ++R LK+ ++ +A M
Sbjct: 75 WASLYYEPPVSSMIRELKHLADLGMSRPLADLM 107
>gi|119471388|ref|ZP_01613860.1| hypothetical protein ATW7_17117 [Alteromonadales bacterium TW-7]
gi|119445664|gb|EAW26948.1| hypothetical protein ATW7_17117 [Alteromonadales bacterium TW-7]
Length = 224
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
+ LF+ ++PS C ++ LC +C + + T+H + + + + M
Sbjct: 1 MKGLFNWLFPSYCVQCKSPVSASLGLCEYCLEDLALLDVTKHP-----NLLHRPDIVDMF 55
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ ++ + Y + LK+
Sbjct: 56 PNCEFDRLFACAFYRPPFEQWLTQLKF 82
>gi|320108567|ref|YP_004184157.1| phosphoribosyltransferase [Terriglobus saanensis SP1PR4]
gi|319927088|gb|ADV84163.1| phosphoribosyltransferase [Terriglobus saanensis SP1PR4]
Length = 281
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 12/110 (10%)
Query: 8 VKSIIIELFHCIYPSICPIYSR-IINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDK- 64
+ L + P C + S ++ R LC C K+ + + ++ ++
Sbjct: 9 AQRSFAPLLSVLAPGECALCSNPLLEARLAPLCQLCLDKLKPVKLLQCVICGEALGMESA 68
Query: 65 ---------DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
P S Y ++ LLK+ +T LA
Sbjct: 69 WAHGEEARIPCTICRFSPPPFVLAASFGSYEGTLRQMIHLLKFQGQTSLA 118
>gi|317487364|ref|ZP_07946155.1| comF family protein [Bilophila wadsworthia 3_1_6]
gi|316921387|gb|EFV42682.1| comF family protein [Bilophila wadsworthia 3_1_6]
Length = 281
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 20/79 (25%), Gaps = 12/79 (15%)
Query: 22 SICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
+CP ++ + C C L+ D+ + P R
Sbjct: 54 PLCPSCRALLRPRKGGYCPSC-----------GELQPFSDSEPALCETCQKTPPPWEHFR 102
Query: 81 SVTLYCDMSCVLVRLLKYH 99
Y L+ K+
Sbjct: 103 FYGAYSGALKTLLLRGKFG 121
>gi|258620407|ref|ZP_05715445.1| ComF-related protein [Vibrio mimicus VM573]
gi|258587286|gb|EEW11997.1| ComF-related protein [Vibrio mimicus VM573]
Length = 286
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRIINL--RFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + ++ F +C C W + + + +++ P
Sbjct: 66 PECHLCRLALDKNLPFGICTACQAWLE----HGYRCARCGLPTLTAVEQCGQCLRQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 122 RKLICVGDYRFPLSDAVHQLKYQ 144
>gi|288933202|ref|YP_003437261.1| phosphoribosyltransferase [Klebsiella variicola At-22]
gi|288887931|gb|ADC56249.1| phosphoribosyltransferase [Klebsiella variicola At-22]
Length = 224
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 14/84 (16%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC SR + LC C + +QK P + +V
Sbjct: 22 ICSRCSRALLACPPLCPQC--------------GLPAATSHHPCGRCLQKPPPWHWLVAV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106
Y LV+ LK+H R +L
Sbjct: 68 NDYRPPLSGLVQQLKFHHRPELGP 91
>gi|170691540|ref|ZP_02882705.1| putative competence protein F-related protein [Burkholderia
graminis C4D1M]
gi|170143745|gb|EDT11908.1| putative competence protein F-related protein [Burkholderia
graminis C4D1M]
Length = 233
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 9/102 (8%)
Query: 16 FHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKNNKDNIDKDPLK 68
I P+ C + + LCG C W++ + A +
Sbjct: 1 MQAILPNACALCGNL--SHNALCGFCDESYWNEGALRCCVCAVPLPVTYRGRRASYCCGD 58
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + P ++ Y L LK+ + LA A+
Sbjct: 59 CIAEKPPFDATFALADYRAPLDTLAVGLKFRAQLVLAREFAR 100
>gi|47217296|emb|CAG12504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 607
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111
P+ Q RS L+ L K +TD A A W
Sbjct: 441 NTPPMLQFRSALLHAGYKVSLSHACKNGIKTD-APPAALW 479
>gi|221311496|ref|ZP_03593343.1| competence protein FC [Bacillus subtilis subsp. subtilis str. 168]
gi|221315823|ref|ZP_03597628.1| competence protein FC [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221320738|ref|ZP_03602032.1| competence protein FC [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221325023|ref|ZP_03606317.1| competence protein FC [Bacillus subtilis subsp. subtilis str. SMY]
Length = 240
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 18/95 (18%)
Query: 23 ICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKS- 69
IC + + +C C SK+ IT L ++
Sbjct: 13 ICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCE 72
Query: 70 -----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++ L L Q RSV Y DM + K+
Sbjct: 73 VWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFR 107
>gi|225551762|ref|ZP_03772705.1| conserved hypothetical protein [Borrelia sp. SV1]
gi|225371557|gb|EEH00984.1| conserved hypothetical protein [Borrelia sp. SV1]
Length = 118
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 7/82 (8%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77
C + L +C +C +K+ I + P
Sbjct: 10 CEQCGEKVGLNRSVCPNCTAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69
Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98
+ R+ + + L +
Sbjct: 70 RKERARMVSDRAASRTFVRLSH 91
>gi|237749574|ref|ZP_04580054.1| amidophosphoribosyltransferase [Oxalobacter formigenes OXCC13]
gi|229380936|gb|EEO31027.1| amidophosphoribosyltransferase [Oxalobacter formigenes OXCC13]
Length = 253
Score = 38.7 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 21 PSICPIYSRIINLRFCLCGHCW-----SKIHFITATEHILK-NNKDNIDKDPLKSMQKDL 74
PS C + + +C C+ ++ + + L ++ +N + ++K
Sbjct: 20 PSPCALC--HSDSNDGICDDCYHRYFSAQCPRCSRCANALPFHDPENENLLCGDCVKKLP 77
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ Y LV LLK+H +A +M + + +
Sbjct: 78 SFDETIVAIDYEPPLDQLVHLLKFHANLTMAPIMGKLIVKA 118
>gi|259910061|ref|YP_002650417.1| gluconate periplasmic binding protein [Erwinia pyrifoliae Ep1/96]
gi|224965683|emb|CAX57215.1| gluconate periplasmic binding protein [Erwinia pyrifoliae Ep1/96]
gi|283480161|emb|CAY76077.1| Competence protein F [Erwinia pyrifoliae DSM 12163]
Length = 227
Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 21 PSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNK-DNIDKDPLKSMQKDLPLTQ 78
P+ C + + + LC C ++ + + + +++ P +
Sbjct: 5 PAGCWLCAMPLTFAIHGLCSVCLRQL-LVQPACCPRCGLPAGGSRHECGRCLRRPPPWQR 63
Query: 79 IRSVTLYCDMSCVLVRLLKY 98
+ +V+ + LV LK+
Sbjct: 64 LIAVSAWHPPLSQLVNRLKF 83
>gi|149911005|ref|ZP_01899634.1| ComF-related protein [Moritella sp. PE36]
gi|149805908|gb|EDM65894.1| ComF-related protein [Moritella sp. PE36]
Length = 237
Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Query: 11 IIIELFHCIYPSICPIYSRIIN--LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PL 67
+I +L + C + I+ F LC C ++ ++ + + ++
Sbjct: 1 MIRKLSMTLLQPRCYLCDMPIDNPQPF-LCLLCLQELPYLPNSHCLRCALPQRKNQQQCD 59
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
+ Q+ P Q+ + Y L++ K+ + L
Sbjct: 60 ECNQQTPPWQQLIACMSYTLECQYLIKQYKFSHQPQL 96
>gi|194367595|ref|YP_002030205.1| competence protein F [Stenotrophomonas maltophilia R551-3]
gi|194350399|gb|ACF53522.1| competence protein F [Stenotrophomonas maltophilia R551-3]
Length = 231
Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 5/104 (4%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-ILKNNKDNIDKDPLKSMQKD 73
L + P C + + LC C + + + DN ++
Sbjct: 16 LLRVLLPLRCLVCGDPGHDDLDLCRTCLADLPWAGRACLRCALPLPDNALIVCGSCREEA 75
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFRV 115
P + LY L+ K+H DLA ++AQ M R
Sbjct: 76 PPQAATHASLLYLPPVDQLLVRYKFH--QDLAAGRLLAQLMQRA 117
>gi|451867|gb|AAB59015.1| in Z18629, ORFX is called comForf3; ORFX; putative [Bacillus
subtilis]
Length = 250
Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 18/95 (18%)
Query: 23 ICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKS- 69
IC + + +C C SK+ IT L ++
Sbjct: 23 ICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCE 82
Query: 70 -----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++ L L Q RSV Y DM + K+
Sbjct: 83 VWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFR 117
>gi|290512006|ref|ZP_06551374.1| gluconate periplasmic binding protein [Klebsiella sp. 1_1_55]
gi|289775796|gb|EFD83796.1| gluconate periplasmic binding protein [Klebsiella sp. 1_1_55]
Length = 224
Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 14/84 (16%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC SR + LC C + +QK P + +V
Sbjct: 22 ICSRCSRALLACPPLCPQC--------------GLPAATSHHPCGRCLQKPPPWHWLVAV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAI 106
Y LV+ LK+H R +L
Sbjct: 68 NDYRPPLSGLVQQLKFHHRPELGP 91
>gi|297183677|gb|ADI19802.1| predicted amidophosphoribosyltransferases [uncultured alpha
proteobacterium EB000_37G09]
Length = 116
Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 7/42 (16%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKI 45
+ ++ + + P+ CP+ + + LC CW +
Sbjct: 10 LPGSINQLFRYGLDILLPNACPLCAEHVAA-RGLCSDCWRGL 50
>gi|121535562|ref|ZP_01667370.1| competence protein F, putative [Thermosinus carboxydivorans Nor1]
gi|121305890|gb|EAX46824.1| competence protein F, putative [Thermosinus carboxydivorans Nor1]
Length = 219
Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 9/29 (31%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHC 41
L IYP CP + C C
Sbjct: 7 RALLDLIYPPKCPACRAGVTEHGAWCQPC 35
>gi|317401260|gb|EFV81902.1| hypothetical protein HMPREF0005_01141 [Achromobacter xylosoxidans
C54]
Length = 154
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77
P CP+ + LC C + + F + + + +
Sbjct: 2 PCDCPLCGARVAGAR-LCEGCETDLADASFAPRCPRCALRLEPD-ALHCAACLARPPAFV 59
Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ + Y + L+ LK R A ++A+ +
Sbjct: 60 RTIAAFDYEAPADTLIGQLKTQLRLSAAPVLARLLAHA 97
>gi|220904997|ref|YP_002480309.1| ComF family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869296|gb|ACL49631.1| ComF family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 299
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 24/95 (25%), Gaps = 12/95 (12%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKD------------PLKSMQKDLPLTQIRSVTL 84
LC C + L + + P + L
Sbjct: 74 LCPQCRILLAPYAGPRCPLCGLPSAPSPEVSALPHLQRGSLCGHCLTTPPPWSGAAFHGL 133
Query: 85 YCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
Y + ++ LK+ LA ++ ++ +
Sbjct: 134 YKEALRHVLLRLKFDGHLYLAPLLGAFLQEAARCL 168
>gi|317499400|ref|ZP_07957667.1| amidophosphoribosyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316893272|gb|EFV15487.1| amidophosphoribosyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 166
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 15 LFHCIYPSICPIY-SRIINLRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQ 71
+ ++P ICP+ +++ +C C K FI K+ K+ + +
Sbjct: 1 MLSFLFPPICPLCAKELLDKGEHICKICSKKQIFIKEPTCYSCGKSMKNQEKEYCSDCRR 60
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ + +Y + +KY
Sbjct: 61 HPKNFERGMGLCIYQKPVTDSLAAIKY 87
>gi|16080598|ref|NP_391425.1| component of the DNA transport apparatus [Bacillus subtilis
subsp. subtilis str. 168]
gi|729159|sp|P39147|COMFC_BACSU RecName: Full=ComF operon protein 3
gi|580842|emb|CAA79228.1| F3 [Bacillus subtilis subsp. subtilis str. 168]
gi|1762334|gb|AAC44942.1| involved in transformation [Bacillus subtilis subsp. subtilis
str. 168]
gi|2636071|emb|CAB15562.1| putative component of the DNA transport apparatus [Bacillus
subtilis subsp. subtilis str. 168]
Length = 229
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 18/95 (18%)
Query: 23 ICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKS- 69
IC + + +C C SK+ IT L ++
Sbjct: 2 ICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCE 61
Query: 70 -----MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++ L L Q RSV Y DM + K+
Sbjct: 62 VWRTRIRDSLLLRQNRSVYTYNDMMKETLSRFKFR 96
>gi|291544879|emb|CBL17988.1| Predicted amidophosphoribosyltransferases [Ruminococcus sp. 18P13]
Length = 237
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 9/96 (9%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
+I L YP+ C I LC C + + + H K +
Sbjct: 5 AIKAWLLDLFYPNRCGCCGVFIPWDQLLCPDCAASLQPVQVCPHCGKVPCNG-------- 56
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
Q+ LP +++ + Y D + + LK + A
Sbjct: 57 -QEALPYSRVYAAYAYADRAKDGILSLKRGHNLNFA 91
>gi|330818395|ref|YP_004362100.1| Phosphoribosyltransferase [Burkholderia gladioli BSR3]
gi|327370788|gb|AEA62144.1| Phosphoribosyltransferase [Burkholderia gladioli BSR3]
Length = 260
Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 34/126 (26%), Gaps = 11/126 (8%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-----ITATEH 53
T++ L P++C + + R +C C W++
Sbjct: 14 GRFATIRRACERLLVAALPNLCLLCGN--SSRNLICEACDIAYWNESRLRCLQCALPLAA 71
Query: 54 ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + P ++ Y L LK+ R + + + +
Sbjct: 72 DRAGQGARLGYRCERCRAAPPPFDATLALGDYRPPLDTLALDLKFGARLAVGRLFGERLA 131
Query: 114 RVLEKI 119
R +
Sbjct: 132 RAAADL 137
>gi|121586610|ref|ZP_01676395.1| ComF family protein [Vibrio cholerae 2740-80]
gi|121549169|gb|EAX59202.1| ComF family protein [Vibrio cholerae 2740-80]
Length = 286
Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 22/81 (27%), Gaps = 5/81 (6%)
Query: 22 SICPIYSRI--INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQ 78
C + N F +C C + + + + + + P +
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLA--HGYRCARCGLPTLTPVEQCGQCLGQPPPWRK 123
Query: 79 IRSVTLYCDMSCVLVRLLKYH 99
+ V Y V LKY
Sbjct: 124 LMCVGDYRFPLSDAVHQLKYQ 144
>gi|54307399|ref|YP_128419.1| amidophosphoribosyltransferase-like protein [Photobacterium
profundum SS9]
gi|46911819|emb|CAG18617.1| hypothetical ComF-related protein [Photobacterium profundum SS9]
Length = 237
Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 22 SICPIYSRIINLRFCL-CGHCWSKIHFITATEHI-LKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + + C HC + HF N + + ++ P ++
Sbjct: 22 PQCQLCQLPLPNNESIWCRHCIA--HFPQPPYCARCGTTTVNPVEQCGQCLRSPPPWHRL 79
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ Y ++ LK++ + LA +A
Sbjct: 80 YRLGEYDFPLKQIIHQLKFNGKFWLAKPLA 109
>gi|218264489|ref|ZP_03478322.1| hypothetical protein PRABACTJOHN_04022 [Parabacteroides johnsonii
DSM 18315]
gi|218221982|gb|EEC94632.1| hypothetical protein PRABACTJOHN_04022 [Parabacteroides johnsonii
DSM 18315]
Length = 226
Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 17/107 (15%)
Query: 11 IIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
I+ +L + YP +C + R ++ +C HC + + D
Sbjct: 2 ILNDLLNLFYPRLCLLCQRSLMEGEEHICLHC--------SNHLPYTHFTDMETNPVCLL 53
Query: 70 MQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRT----DLAIMMA 109
+Q + L+ L+ LKYH +L M A
Sbjct: 54 LQGKTSFVAA-TALLHFTKGGSGQKLIHSLKYHGNKKLGYELGRMAA 99
>gi|226355389|ref|YP_002785129.1| competence protein ComF [Deinococcus deserti VCD115]
gi|226317379|gb|ACO45375.1| putative competence protein ComF [Deinococcus deserti VCD115]
Length = 200
Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 16/94 (17%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
P CP + + LC C + + PL S + +
Sbjct: 3 PRSCPGCGQQLGPEAGLCSGCRAALK------------PQVQSHSPLSSRAEP----HLV 46
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
++ Y VR LKY DLA ++ + R
Sbjct: 47 TLGAYRGPLRRSVRALKYSGARDLAGILGGALAR 80
>gi|297618073|ref|YP_003703232.1| phosphoribosyltransferase [Syntrophothermus lipocalidus DSM 12680]
gi|297145910|gb|ADI02667.1| phosphoribosyltransferase [Syntrophothermus lipocalidus DSM 12680]
Length = 239
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 15 LFHCIYP-SICPIYSR----IINLRFCLCGHCWSKIHFI-TATEHILKNNKDNIDKD--P 66
LF ++P + C + + + C C K+ + K D
Sbjct: 5 LFDLVFPHNTCALCRKPGLYWTGRPW--CEECDRKLEATRENRPVCDRCGKYLCGGDNQC 62
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
++ P R+V Y V V+LLK+ R +A+ M + M
Sbjct: 63 QDCSEQAPPFFIARAVGPYEKCYKVAVKLLKFMCRGYIAVRMGRMMA 109
>gi|34499837|ref|NP_904052.1| competence protein F [Chromobacterium violaceum ATCC 12472]
gi|34105687|gb|AAQ62041.1| competence protein F [Chromobacterium violaceum ATCC 12472]
Length = 222
Score = 38.4 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 20/82 (24%), Gaps = 1/82 (1%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + LC C + + + + + +
Sbjct: 6 CVLCGDARARE-GLCADCRAMLPRMPDERCPRCAEPTIGGAVCGHCQRHPPAFDALHAPY 64
Query: 84 LYCDMSCVLVRLLKYHDRTDLA 105
L+ L+ KY R LA
Sbjct: 65 LFGYPLNGLIHAYKYGRRLQLA 86
>gi|237807286|ref|YP_002891726.1| ComF family protein [Tolumonas auensis DSM 9187]
gi|237499547|gb|ACQ92140.1| ComF family protein [Tolumonas auensis DSM 9187]
Length = 236
Score = 38.4 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 8/106 (7%)
Query: 10 SIIIELFHCIYPS---ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65
++ +YP+ IC + + LC HC ++ + H K+
Sbjct: 4 ALYRIFSSALYPACQGICLFCRQPTHQPL-LCHHCAEELPLLD--HHCRLCGSPMAGKED 60
Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + + + Y L+ LKY +T A + +
Sbjct: 61 ICGHCLLQPPEWDFLHILADYQFPLTGLIHQLKYQHKTLPAALFGR 106
>gi|290473230|ref|YP_003466095.1| putative periplasmic gluconate-binding protein in GNT I transport
system [Xenorhabdus bovienii SS-2004]
gi|289172528|emb|CBJ79295.1| putative periplasmic gluconate-binding protein in GNT I transport
system [Xenorhabdus bovienii SS-2004]
Length = 227
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 14/88 (15%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC I + + +C C ++ D + ++ P + ++
Sbjct: 22 ICHICHQQLKRLKHVCPRC--------------ALPAESRDFPCGRCLKNPPPWQHLIAI 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
T Y L+R KYH LA ++A+
Sbjct: 68 TDYAPPLSRLIRRYKYHGTPQLATVLAR 95
>gi|224534526|ref|ZP_03675102.1| conserved hypothetical protein [Borrelia spielmanii A14S]
gi|224514203|gb|EEF84521.1| conserved hypothetical protein [Borrelia spielmanii A14S]
Length = 118
Score = 38.4 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 7/82 (8%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77
C + L +C +C +K+ I + P
Sbjct: 10 CEQCGEKVGLNRTICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69
Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98
+ R + + + L +
Sbjct: 70 RKERVRMVGDGVVSKVFIRLFH 91
>gi|313669260|ref|YP_004049544.1| hypothetical protein NLA_19950 [Neisseria lactamica ST-640]
gi|313006722|emb|CBN88192.1| conserved hypothetical protein [Neisseria lactamica 020-06]
Length = 241
Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 27/94 (28%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +CG C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICGGCRDDLAAYRTDAANSCPLCFRHIQGGSVCGACQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++R LK+ +A +A M
Sbjct: 78 WASLYYEPPVSNMIRALKHLADLSMARPLADLMM 111
>gi|322515352|ref|ZP_08068348.1| competence protein F [Actinobacillus ureae ATCC 25976]
gi|322118639|gb|EFX90861.1| competence protein F [Actinobacillus ureae ATCC 25976]
Length = 225
Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 9/81 (11%), Positives = 24/81 (29%), Gaps = 6/81 (7%)
Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79
C + + + +C C+ K I + + + ++ + +I
Sbjct: 7 RCIHCRKPLAIAQHTICSSCYRK---IEKSCYCGCCGALLPENQLYCGNCLRNEPKWHRI 63
Query: 80 RSVTLYCDMSCVLVRLLKYHD 100
+ Y + K+ D
Sbjct: 64 VQIAYYKPPLSDWIHRFKFQD 84
>gi|271962956|ref|YP_003337152.1| phosphoribosyltransferase [Streptosporangium roseum DSM 43021]
gi|270506131|gb|ACZ84409.1| phosphoribosyltransferase [Streptosporangium roseum DSM 43021]
Length = 268
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 26/100 (26%), Gaps = 20/100 (20%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPL 67
++ L + P C L C C +++H
Sbjct: 33 GAVPTALLDLVLPPRCAGCGV----PGALVCPRCAAELH---------------GRPACR 73
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIM 107
+ L + S T Y + + K RT LA
Sbjct: 74 MPVPSPPGLPECWSATDYTGAARRAIIAYKERGRTALAHP 113
>gi|332827557|gb|EGK00303.1| hypothetical protein HMPREF9455_03442 [Dysgonomonas gadei ATCC
BAA-286]
Length = 229
Score = 38.4 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 13/106 (12%)
Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
++++ + + +P +C + + R+ +C C + + T L+ D
Sbjct: 1 MRNLFRDFLNLFFPDLCVVCNQRLSEGEEHICTDC---LLLLPRTNFHLQP-----DNRL 52
Query: 67 LKSMQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMA 109
+ +P QI + Y ++ LKY ++ +
Sbjct: 53 EQFFAGRIPFQQI-AAFAYFVKGGSIQSIIHELKYKRNPEIGRFIG 97
>gi|119358139|ref|YP_912783.1| phosphoribosyltransferase [Chlorobium phaeobacteroides DSM 266]
gi|119355488|gb|ABL66359.1| phosphoribosyltransferase [Chlorobium phaeobacteroides DSM 266]
Length = 231
Score = 38.4 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 7/89 (7%)
Query: 14 ELFHCIYPSICPIYSR-IINLRFCLCGHCWSKI-HFITATEHILKNNKDNIDKDPLKSMQ 71
L H +YP++C + ++ LC C + F + +I+ +
Sbjct: 4 RLLHFVYPNVCVVCQNLLLASERYLCSSCLNGFEPFSEGAA-PERVFLRSIESHFGEDSL 62
Query: 72 KDLPLTQIRSVTLYCDMS-CVLVRLLKYH 99
+ + + + + V +KY
Sbjct: 63 FERAWCRY---VFHKNSALQQAVHAMKYQ 88
>gi|170723998|ref|YP_001751686.1| competence protein ComF [Pseudomonas putida W619]
gi|169762001|gb|ACA75317.1| competence protein ComF [Pseudomonas putida W619]
Length = 245
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 28/88 (31%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + +C C ++ +++ + ++ Q+ +
Sbjct: 20 ACLLCGISAEQPHPICIACEEELPWLSEYCIHCALPLPMAGLTCAQCSRRAPAFEQVVAP 79
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
Y L+ K++ + L +MA+
Sbjct: 80 WYYGFPVDTLISRFKHNRQWPLGRLMAE 107
>gi|307258109|ref|ZP_07539861.1| hypothetical protein appser10_20890 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306863472|gb|EFM95403.1| hypothetical protein appser10_20890 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 225
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 23/80 (28%), Gaps = 6/80 (7%)
Query: 23 ICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79
C R+ +C C K+ T + +D + ++ + ++
Sbjct: 7 RCIECHKRLQIAEHGICSRCLKKLDI---TPYCGCCGSLLVDNHRYCGECLRNEPKWHRM 63
Query: 80 RSVTLYCDMSCVLVRLLKYH 99
V Y + K+
Sbjct: 64 VRVCRYSAPMTDWIHRFKFQ 83
>gi|32035475|ref|ZP_00135432.1| COG1040: Predicted amidophosphoribosyltransferases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126209458|ref|YP_001054683.1| competence protein F [Actinobacillus pleuropneumoniae L20]
gi|165977450|ref|YP_001653043.1| competence protein F [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|190151360|ref|YP_001969885.1| Competence protein F [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303250438|ref|ZP_07336635.1| competence protein F [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307246942|ref|ZP_07529007.1| hypothetical protein appser1_21320 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307249079|ref|ZP_07531086.1| hypothetical protein appser2_20410 [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307251479|ref|ZP_07533386.1| hypothetical protein appser6_30 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255924|ref|ZP_07537725.1| hypothetical protein appser9_21450 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307260377|ref|ZP_07542084.1| hypothetical protein appser11_21580 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307262507|ref|ZP_07544152.1| hypothetical protein appser12_20470 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307264715|ref|ZP_07546295.1| hypothetical protein appser13_21000 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126098250|gb|ABN75078.1| Competence protein F [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|165877551|gb|ABY70599.1| competence protein F [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|189916491|gb|ACE62743.1| Competence protein F [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302650426|gb|EFL80585.1| competence protein F [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306852227|gb|EFM84467.1| hypothetical protein appser1_21320 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306854367|gb|EFM86563.1| hypothetical protein appser2_20410 [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306860943|gb|EFM92949.1| hypothetical protein appser6_30 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861192|gb|EFM93185.1| hypothetical protein appser9_21450 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865628|gb|EFM97509.1| hypothetical protein appser11_21580 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306867884|gb|EFM99715.1| hypothetical protein appser12_20470 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306870027|gb|EFN01791.1| hypothetical protein appser13_21000 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 225
Score = 38.0 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 23/80 (28%), Gaps = 6/80 (7%)
Query: 23 ICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79
C R+ +C C K+ T + +D + ++ + ++
Sbjct: 7 RCIECHKRLQIAEHGICSRCLKKLDI---TPYCGCCGSLLVDNHRYCGECLRNEPKWHRM 63
Query: 80 RSVTLYCDMSCVLVRLLKYH 99
V Y + K+
Sbjct: 64 VRVCRYSAPMTDWIHRFKFQ 83
>gi|168699233|ref|ZP_02731510.1| phosphoribosyltransferase [Gemmata obscuriglobus UQM 2246]
Length = 244
Score = 38.0 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 21/100 (21%), Gaps = 8/100 (8%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRF----CLCGHCWSKI---HFITATEHILKNN 58
+ +I +YP C + LC C I F
Sbjct: 2 RATSELIRHAIGLVYPDSCLVCDAEEPPDGALRHGLCSECRRAIVSDPFPACPWCAQTVG 61
Query: 59 KDN-IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLK 97
I K + + Y + +K
Sbjct: 62 PHADISKGCGECRGAGFAFDSAVRLGPYEGKLRDAILRMK 101
>gi|260599715|ref|YP_003212286.1| protein gntX [Cronobacter turicensis z3032]
gi|260218892|emb|CBA34247.1| Protein gntX [Cronobacter turicensis z3032]
Length = 251
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 13 IELFHCIYPSICPIYSRIINL-RFCLCGHCWSKIHFITATEHILKNNKDNID-KDPLKSM 70
E+ P +C + + + + +C C ++ I + + + +
Sbjct: 23 KEVVMLTIPGMCWLCRMPLRVPDWGICSRC-QRLRQI--PVCPQCGLPAACETQPCGRCL 79
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
QK ++ + + Y LV K+
Sbjct: 80 QKPPVWQRLLAASEYAPPVSGLVHQFKFQ 108
>gi|157693946|ref|YP_001488408.1| competence protein FC [Bacillus pumilus SAFR-032]
gi|157682704|gb|ABV63848.1| competence protein FC [Bacillus pumilus SAFR-032]
Length = 228
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 31/100 (31%), Gaps = 17/100 (17%)
Query: 23 ICPIYSRIINLRFC-----------LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
IC I + F LC C + I + D+
Sbjct: 2 ICLICEGHVVTPFTWKSLLLLNDDRLCIACKHHLEKIKRPICPACGRAQSNDQLCQDCSW 61
Query: 72 -KDLP-----LTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
K+ P L + RSV Y D+ ++ K+ T LA
Sbjct: 62 WKERPDSTTVLVKNRSVYAYNDLMKDVLSRFKFRGDTALA 101
>gi|325105965|ref|YP_004275619.1| phosphoribosyltransferase [Pedobacter saltans DSM 12145]
gi|324974813|gb|ADY53797.1| phosphoribosyltransferase [Pedobacter saltans DSM 12145]
Length = 231
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 13/100 (13%)
Query: 9 KSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+ + + +P++C ++ LC C + + T H L+ N L
Sbjct: 5 NTYLSDFCSLFFPALCCGCKTTLLRQEELLCTKCIYNLPY---TNHNLQENNQ------L 55
Query: 68 KSMQKDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDL 104
+ + S LY ++ LKY++R DL
Sbjct: 56 EKIFWGRVNILGASAFLYFKQGGTVQRIMHQLKYNNRPDL 95
>gi|320532551|ref|ZP_08033358.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320135222|gb|EFW27363.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 168
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 19/90 (21%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
P+ C R LC C ++ + A +++ D D I+
Sbjct: 33 PTSCAGCGRW---ETALCPRC-REL--LEAEPFAVEHADAAGDLD-------------IQ 73
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
++ Y +V K R DL+ +MA+
Sbjct: 74 ALASYTGPVRTMVLGWKNGAREDLSEVMAR 103
>gi|291521802|emb|CBK80095.1| Predicted amidophosphoribosyltransferases [Coprococcus catus
GD/7]
Length = 240
Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Query: 18 CIYPSICPIYSRIIN----LRFCLCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQ 71
+YP CP+ ++++ R + G C+ K+ I K + +
Sbjct: 9 LLYPPECPVCQKLLSDTEDRRRHIHGDCYRKLRRIVEPMCKRCGKPLLSAQQEYCYDCQR 68
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ S+ +Y +S + KY
Sbjct: 69 RPSACEAGHSLWMYDAVSSESIFAYKY 95
>gi|153825531|ref|ZP_01978198.1| ComF family protein [Vibrio cholerae MZO-2]
gi|149740816|gb|EDM54907.1| ComF family protein [Vibrio cholerae MZO-2]
Length = 286
Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ + Y V LKY
Sbjct: 122 RKLMCIGDYRFPLSDAVHQLKYQ 144
>gi|167752290|ref|ZP_02424417.1| hypothetical protein ALIPUT_00534 [Alistipes putredinis DSM 17216]
gi|167660531|gb|EDS04661.1| hypothetical protein ALIPUT_00534 [Alistipes putredinis DSM 17216]
Length = 236
Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 13/106 (12%)
Query: 10 SIIIELFHCIYPSICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
SI+ ++ P +CP+ + C C T D +
Sbjct: 2 SILNDIKGLFLPPVCPVCGGELHEGEGAFCMMC--------RTLAPQTGFWRRADNPLAE 53
Query: 69 SMQKDLPLTQIRSVTLYCDMS---CVLVRLLKYHDRTDLAIMMAQW 111
++ + P+ Q S L+ + KY++R A + W
Sbjct: 54 RLRNEFPVVQA-SAFLWFVAGSPWQRAIHGFKYYNRWRTARDLGAW 98
>gi|86739476|ref|YP_479876.1| amidophosphoribosyltransferases-like protein [Frankia sp. CcI3]
gi|86566338|gb|ABD10147.1| amidophosphoribosyltransferases-like [Frankia sp. CcI3]
Length = 278
Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 27/108 (25%), Gaps = 14/108 (12%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
A + + + L I P C C C +++ +
Sbjct: 4 ATLSLLTRNLAILADLIMPLACAGCGDWGASA---CPACVAELR-----------GPVFL 49
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ L + Y D L+ K R DLA +
Sbjct: 50 AAAGSLATPWRRGLPPCLAAARYADRVRALLLAYKERGRRDLAGPLGG 97
>gi|291533537|emb|CBL06650.1| hypothetical protein MHY_19270 [Megamonas hypermegale ART12/1]
Length = 163
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 15/92 (16%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+ +I + ++PS CP + + + C C +I ++N D+D
Sbjct: 2 LNNIYQAIMQFLFPSHCPSCNAYVEQKGMWCPSCLEEI---------IRNENLAYDEDIR 52
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + + I ++ Y L+ LKY
Sbjct: 53 QYI------SPIIAIGKYDKGLKNLIHELKYQ 78
>gi|261867262|ref|YP_003255184.1| protein GntX [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412594|gb|ACX81965.1| protein GntX [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 228
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 12/98 (12%)
Query: 19 IYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQKDLP 75
++ S C + + LC C I + + + ++++
Sbjct: 3 VFQSCCVHCHTPLKLAKHGLCSRC---NRTIQRFAYCGCCGAELAENVLHCGNCLRQEPA 59
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYH-----DRTDLAIMM 108
++ + Y + L+ K+ DRT LA ++
Sbjct: 60 WDRMVIIGRYNEPLSTLIHRFKFQNQFWLDRT-LARLL 96
>gi|77920166|ref|YP_357981.1| amidophosphoribosyltransferase [Pelobacter carbinolicus DSM 2380]
gi|77546249|gb|ABA89811.1| predicted amidophosphoribosyltransferase [Pelobacter carbinolicus
DSM 2380]
Length = 247
Score = 38.0 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 12/88 (13%)
Query: 24 CPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
CP L C C A + + D++ ++ + P R +
Sbjct: 37 CPACLDAFAPLDSACCPRC--------ALPYPQPSGSDHL---CEACLRHEPPFVWTRCL 85
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
LY V K+H + +A+
Sbjct: 86 GLYEAKLREAVHAFKFHGKVHFDRPLAR 113
>gi|229527355|ref|ZP_04416747.1| hypothetical protein VCG_000420 [Vibrio cholerae 12129(1)]
gi|229334987|gb|EEO00472.1| hypothetical protein VCG_000420 [Vibrio cholerae 12129(1)]
Length = 286
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ + Y V LKY
Sbjct: 122 RKLMCIGDYRFPLSDAVHQLKYQ 144
>gi|313149331|ref|ZP_07811524.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138098|gb|EFR55458.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 230
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 16/111 (14%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65
+ + + ++P C + ++ CLC C L ++ KD
Sbjct: 1 MNTWFHSFWSLLFPRCCVVCGSPLSRGEECLCTCC----------NINLPRTGFHLRKDN 50
Query: 66 PLKSM--QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWM 112
P++ + + L + S Y S ++ LLKY +L +M ++M
Sbjct: 51 PVECLFWGRIPGLKRASSFLFYRKGSDFRRILHLLKYGGYKELGEVMGRYM 101
>gi|317154568|ref|YP_004122616.1| phosphoribosyltransferase [Desulfovibrio aespoeensis Aspo-2]
gi|316944819|gb|ADU63870.1| phosphoribosyltransferase [Desulfovibrio aespoeensis Aspo-2]
Length = 260
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 24/100 (24%), Gaps = 22/100 (22%)
Query: 22 SICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--------------- 65
+ CP+ S + LC C + T L + +
Sbjct: 17 ARCPVCSALTSGGDTPLCPACALALRPRTRGCCALCGDMFGDGNEPGGRKEQGVENQPDH 76
Query: 66 ------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ P ++ Y L+ K+H
Sbjct: 77 AQPDTVCGECRLDPPPWDRLHFHGAYSGPLRDLIIDYKFH 116
>gi|163787143|ref|ZP_02181590.1| putative amidophosphoribosyl-transferase [Flavobacteriales
bacterium ALC-1]
gi|159877031|gb|EDP71088.1| putative amidophosphoribosyl-transferase [Flavobacteriales
bacterium ALC-1]
Length = 219
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 39/110 (35%), Gaps = 24/110 (21%)
Query: 18 CIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPL 76
+P++C + ++ + C C ++ N + + +K +
Sbjct: 1 MFFPAVCEACNTVLGDNETVVCISCRHQLP---------VTNFHFDNSETVKKIV----Y 47
Query: 77 TQIR----SVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
++R + L+ + L+ LKY ++ + QW+ ++
Sbjct: 48 GRVRLKNATALLHFSKKGIVQQLLHNLKYRGHEQISTFLGQWL---GAEL 94
>gi|134297041|ref|YP_001120776.1| phosphoribosyltransferase [Burkholderia vietnamiensis G4]
gi|134140198|gb|ABO55941.1| phosphoribosyltransferase [Burkholderia vietnamiensis G4]
Length = 270
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 15/127 (11%), Positives = 31/127 (24%), Gaps = 22/127 (17%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF------------ 47
++ + ++ + P+ C + + +C C W++
Sbjct: 13 VLSHARVLLTHVIAAALPNRCALCGNL--SHNIICDACDAAYWNEARLRCEVCALPLGVG 70
Query: 48 ---ITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
P ++ Y L R LK+ R L
Sbjct: 71 RASTRRPGGRHGGADATSAYRCDGCRATPPPFDATLALADYRAPLDGLARGLKFRARLAL 130
Query: 105 -AIMMAQ 110
A A+
Sbjct: 131 GAEFAAR 137
>gi|52426289|ref|YP_089426.1| ComFC protein [Mannheimia succiniciproducens MBEL55E]
gi|52308341|gb|AAU38841.1| ComFC protein [Mannheimia succiniciproducens MBEL55E]
Length = 228
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 12/94 (12%)
Query: 23 ICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQKDLPLTQI 79
C R + LC C +I + + + +Q ++
Sbjct: 7 RCIYCQRKLAIGSHGLCCSCNKQIR---RFNYCGVCGSELAENTLGCGNCLQNRPAWHRM 63
Query: 80 RSVTLYCDMSCVLVRLLKYH-----DRTDLAIMM 108
+ Y L+ K+ DRT LA ++
Sbjct: 64 VIIGAYKMPLSSLIHRFKFQNSFYFDRT-LARLL 96
>gi|167822561|ref|ZP_02454032.1| putative competence protein [Burkholderia pseudomallei 9]
Length = 123
Score = 38.0 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 27/104 (25%), Gaps = 7/104 (6%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55
+ + ++ P+ C + + +C C W++ L
Sbjct: 11 IRTMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + + P ++ Y L LK+
Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFR 112
>gi|83721230|ref|YP_440981.1| ComF family protein [Burkholderia thailandensis E264]
gi|167617774|ref|ZP_02386405.1| ComF family protein [Burkholderia thailandensis Bt4]
gi|257140365|ref|ZP_05588627.1| ComF family protein [Burkholderia thailandensis E264]
gi|83655055|gb|ABC39118.1| ComF family protein [Burkholderia thailandensis E264]
Length = 255
Score = 38.0 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 30/113 (26%), Gaps = 7/113 (6%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHILKNNKDNIDKD 65
++ P+ C + + +C C W++ L + +
Sbjct: 21 VLARFSAAALPNRCALCGNL--SHRTICDCCDDAYWNEARLRCPRCALPLPGARGAMRYR 78
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ ++ Y L LK+ R L + + R+
Sbjct: 79 CGACARMPPRFDATLALADYRAPLDSLALDLKFRARLALGREFGERLARLATD 131
>gi|333029574|ref|ZP_08457635.1| phosphoribosyltransferase [Bacteroides coprosuis DSM 18011]
gi|332740171|gb|EGJ70653.1| phosphoribosyltransferase [Bacteroides coprosuis DSM 18011]
Length = 230
Score = 38.0 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 9 KSIIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHF 47
K ++ + IYP C I R + +C C +++
Sbjct: 3 KKLLTSVLDVIYPPTCMICQRALYEKEQSICLSCLNELPL 42
>gi|304391089|ref|ZP_07373041.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|304325972|gb|EFL93218.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 259
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 16/92 (17%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
EL + P+ C +C C +++ L+ +D ++
Sbjct: 12 GELGKVLLPTECVGCGAW---DEEICDTCLAQM---LGCPFPLQIGED------DDNVTD 59
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
++ Y +V K+ R DL
Sbjct: 60 VPVF----AIAKYDGPMRRVVLTGKHDKRRDL 87
>gi|268612018|ref|ZP_06145745.1| competence protein [Ruminococcus flavefaciens FD-1]
Length = 219
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKI 45
+L H +YP+ CP+ +I C C K+
Sbjct: 7 RKLIHLLYPNRCPVCGEVIGANDRFCTDCEGKL 39
>gi|188586866|ref|YP_001918411.1| amidophosphoribosyltransferase-like protein [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179351553|gb|ACB85823.1| amidophosphoribosyltransferase-like protein [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 303
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 15/104 (14%)
Query: 9 KSIIIELFHCIYPSICPIYSRI--INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ + +YP + + F +C C + E + +N P
Sbjct: 26 REQVSTQGRLVYPPYTFLGDNLYLSETDF-ICADC------LEKLELACFSVSENYSLKP 78
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
++ + T++ Y L+ LKY +LAI + +
Sbjct: 79 MELI------TEVIYAGNYRGYMKELILRLKYQGEKELAIPLGK 116
>gi|88801440|ref|ZP_01116968.1| putative amidophosphoribosyl-transferase [Polaribacter irgensii
23-P]
gi|88782098|gb|EAR13275.1| putative amidophosphoribosyl-transferase [Polaribacter irgensii
23-P]
Length = 245
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 31/103 (30%), Gaps = 7/103 (6%)
Query: 11 IIIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
++ +L YP IC S+ +I +C C + +
Sbjct: 20 LLKDLRALFYPRICANCSQQLIQNESIICTFCRHDLPLTHFQSYTKNKINAIFYGRVTIE 79
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
L + ++ L+ LKY ++ I W+
Sbjct: 80 KAFALLFLRK------KGITKNLIHKLKYQGTEEIGIFFGNWI 116
>gi|332524133|ref|ZP_08400363.1| putative phosphoribosyl transferase [Rubrivivax benzoatilyticus
JA2]
gi|332107472|gb|EGJ08696.1| putative phosphoribosyl transferase [Rubrivivax benzoatilyticus
JA2]
Length = 228
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 21/83 (25%), Gaps = 3/83 (3%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
P C + R LC C ++ + Q P
Sbjct: 11 PGQCEVCRSAT--RAALCADCVARFA-APRPRCRRCALPLAAGDLCGECRQHPPPFEHTA 67
Query: 81 SVTLYCDMSCVLVRLLKYHDRTD 103
Y LV LK+H R +
Sbjct: 68 CAADYGFPWDGLVAALKFHGRVE 90
>gi|315604875|ref|ZP_07879933.1| competence protein F [Actinomyces sp. oral taxon 180 str. F0310]
gi|315313414|gb|EFU61473.1| competence protein F [Actinomyces sp. oral taxon 180 str. F0310]
Length = 247
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 29/104 (27%), Gaps = 19/104 (18%)
Query: 5 IQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK 64
+ + ++ EL + P C LC C + + + + +
Sbjct: 4 PRAARDLVRELVGALLPVQCAGCLAW---DQVLCPSC----RALARRPPMNADVEGHRGP 56
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMM 108
P + Y +V K+ RTDL +
Sbjct: 57 LPGVFLGD------------YGGALRRIVLSAKHSARTDLGEFL 88
>gi|307824520|ref|ZP_07654745.1| phosphoribosyltransferase [Methylobacter tundripaludum SV96]
gi|307734504|gb|EFO05356.1| phosphoribosyltransferase [Methylobacter tundripaludum SV96]
Length = 235
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 7/89 (7%), Positives = 26/89 (29%), Gaps = 9/89 (10%)
Query: 17 HCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD------PLKSM 70
+ P C + + +C C++ + + ++ + +
Sbjct: 13 DYLLPPTCILCGNPGHNSRDICHSCYTHLP---RNNLCCYRCAEILETPTTAPVLCGRCL 69
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + + ++ L+ LK+
Sbjct: 70 SRHPAFDETYAPFIHQGAIRHLIGTLKFG 98
>gi|227873146|ref|ZP_03991437.1| possible competence protein F [Oribacterium sinus F0268]
gi|227840977|gb|EEJ51316.1| possible competence protein F [Oribacterium sinus F0268]
Length = 252
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 9/95 (9%)
Query: 15 LFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQ 71
+ + ++P C + + + + +C C + + +D + +
Sbjct: 22 IINALFPPRCILCDELTESGKEEICPACKAYEKIMEEPVCKKCGRGILLDTEEYCGNCKR 81
Query: 72 KDLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTD 103
+ + LY ++ LV LKY R D
Sbjct: 82 HGFSFSTG--MMLYELTEEVEDALVL-LKYKGRRD 113
>gi|166030540|ref|ZP_02233369.1| hypothetical protein DORFOR_00201 [Dorea formicigenerans ATCC
27755]
gi|166029702|gb|EDR48459.1| hypothetical protein DORFOR_00201 [Dorea formicigenerans ATCC
27755]
Length = 266
Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 6/102 (5%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT----ATEHILKNNKDNIDKDPLK 68
++ +PSICP ++ R +C C + + K + +
Sbjct: 31 EKVLDIFWPSICPFCGKV--NRGGVCPLCRKAVEKLEIHEPRCLKCGKPIRCEEREFCHD 88
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + SV L+ + LKYH++ +A AQ
Sbjct: 89 CYNTEHIYERGLSVWLHKPPVNQAIYQLKYHNQRYVAKYFAQ 130
>gi|298528419|ref|ZP_07015823.1| phosphoribosyltransferase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512071|gb|EFI35973.1| phosphoribosyltransferase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 262
Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 29/102 (28%), Gaps = 7/102 (6%)
Query: 23 ICPIYSRIIN---LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLP 75
C I + + +C C KI +++ L + P
Sbjct: 38 RCLICGMVRDKETGPDTMCPACLEKIKIRRRGFCPGCAKIYTLEEASPYYCLDCRTRPFP 97
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ + Y D L+ K+ L ++ + + +
Sbjct: 98 WSGLGFFGPYQDRLRELILCFKFKGDLGLGRVLGGMLVQAGQ 139
>gi|256396692|ref|YP_003118256.1| hypothetical protein Caci_7591 [Catenulispora acidiphila DSM 44928]
gi|256362918|gb|ACU76415.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928]
Length = 244
Score = 37.6 bits (86), Expect = 0.58, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 16/95 (16%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C R LC C + + P +++ + +V
Sbjct: 20 CGGCGRPQPSGEPLCEDC----------------DALLAEGGPWRTLAAVPGTPRTHAVA 63
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
Y D ++ K RTDL + + + R + +
Sbjct: 64 RYEDPIRTMLIGYKERGRTDLRRALGRALARAVAQ 98
>gi|254520269|ref|ZP_05132325.1| ComF protein [Clostridium sp. 7_2_43FAA]
gi|226914018|gb|EEH99219.1| ComF protein [Clostridium sp. 7_2_43FAA]
Length = 214
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 2 PAIIQTVKSIIIELFHCIYPS--ICPIYSRIINLRFCLCGHCWSKI 45
+I+ ++ II EL IYP C + +C C SKI
Sbjct: 3 KGLIKLLREIIDELLDIIYPPKNKCITCDNEV---IGVCPICKSKI 45
>gi|298489185|ref|ZP_07007204.1| Competence protein F [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298156267|gb|EFH97368.1| Competence protein F [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 244
Score = 37.6 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 23/75 (30%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ Q+ +
Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGGQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDSLITRFKH 95
>gi|218668080|ref|YP_002424749.1| competence protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218520293|gb|ACK80879.1| competence protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 263
Score = 37.6 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 26/98 (26%), Gaps = 5/98 (5%)
Query: 13 IELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
H ++P C LC C+ + A + D
Sbjct: 42 GRFNHWLFPERCRACG----APGAPLCAGCFGDWPRLPAERCSYCALPLLDNGDCPVCSV 97
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ + + +Y + + K+ R D +A
Sbjct: 98 EAPAYDHVYTPFIYAEPLNTAIIAWKFQRRLDWTRPLA 135
>gi|325145262|gb|EGC67541.1| comF/gntX family protein [Neisseria meningitidis M01-240013]
Length = 241
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 25/94 (26%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRNDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111
>gi|298242604|ref|ZP_06966411.1| hypothetical protein Krac_11086 [Ktedonobacter racemifer DSM 44963]
gi|297555658|gb|EFH89522.1| hypothetical protein Krac_11086 [Ktedonobacter racemifer DSM 44963]
Length = 142
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 6/104 (5%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
++ T+K++ E ++P C R LC C +++ H
Sbjct: 11 LLATLKTLGREGLDVLFPPRCASCQR---RGHVLCPRCQARLQAQALPTHP-PCPLCTQR 66
Query: 64 KDPLKSMQKDLP--LTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
P + + I + Y D ++ LKY T LA
Sbjct: 67 GGPNACLLYPPRGHMHDIYAFGPYADPLRACIKTLKYDGETRLA 110
>gi|226939033|ref|YP_002794104.1| ComF [Laribacter hongkongensis HLHK9]
gi|226713957|gb|ACO73095.1| ComF [Laribacter hongkongensis HLHK9]
Length = 234
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 10/93 (10%), Positives = 26/93 (27%), Gaps = 2/93 (2%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + + +C C + + + + + + + + +
Sbjct: 23 CGLCGQPADRP--VCAACLAALPQLAGSACPRCGVRHPAGGVCHRCRLRPPAFDALHAGH 80
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
Y ++ KY A +MA M
Sbjct: 81 AYQWPLSAVLHRCKYGGDLQQAGLMAYLMLAAA 113
>gi|110835082|ref|YP_693941.1| hypothetical protein ABO_2221 [Alcanivorax borkumensis SK2]
gi|110648193|emb|CAL17669.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 247
Score = 37.6 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 35/107 (32%), Gaps = 11/107 (10%)
Query: 1 MPAIIQTVKSII-IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNK 59
MP ++ + F+ I PS CP+ + + LC C + +T
Sbjct: 1 MPVNLKAATKVYCSTFFNRINPSPCPLCGK--SESGALCTDCLRLLARVTGPVCRCGLPH 58
Query: 60 DN--------IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ + + +++ + +S Y L+ K+
Sbjct: 59 GDTPLPSPDSLPPLCGRCIRQPPAFSASQSPLQYGFPLDALITRYKH 105
>gi|319638737|ref|ZP_07993496.1| competence protein [Neisseria mucosa C102]
gi|317399978|gb|EFV80640.1| competence protein [Neisseria mucosa C102]
Length = 238
Score = 37.6 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 5/93 (5%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIH--FITAT-EHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + ++ LC C + + FI A L +K ++
Sbjct: 17 RCVLCHDSVSD--GLCRGCANDLTEYFIDAAQSCPLCFRHVTGGAVCGGCQKKPPAFDRM 74
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ Y ++R LK+ ++ +A M
Sbjct: 75 WASLYYEPPVSSMIRELKHLADLGMSRPLADLM 107
>gi|15595006|ref|NP_212795.1| hypothetical protein BB0661 [Borrelia burgdorferi B31]
gi|2688597|gb|AAC67015.1| predicted coding region BB0661 [Borrelia burgdorferi B31]
Length = 123
Score = 37.6 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 26/99 (26%), Gaps = 8/99 (8%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
L + C + L +C +C +K+ I +
Sbjct: 5 RLAKVNFEVFCEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSP 64
Query: 74 ------LPLTQI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104
P + R+ + + VRL + D+
Sbjct: 65 FQELKEKPFKRKERARMVSDRAASKTFVRLFHFGINIDI 103
>gi|206559143|ref|YP_002229903.1| hypothetical protein BCAL0746 [Burkholderia cenocepacia J2315]
gi|198035180|emb|CAR51054.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
Length = 256
Score = 37.2 bits (85), Expect = 0.67, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 19/135 (14%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHFIT------- 49
M ++ V+++++ + P+ C + + +CG C W++
Sbjct: 1 MRVVLSQVRTLVVRVAAVALPNRCALCGNL--SHEVICGACDAAYWNEARLRCAVCALPL 58
Query: 50 ATEHILKNNKDNIDKD------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
H P ++ Y L R LK+H R
Sbjct: 59 GVGHARSLGGRRTGAGRATAYRCDACRTAPPPFDATLALADYRAPLDGLARGLKFHARLA 118
Query: 104 LAIMMAQWMFRVLEK 118
L A + R+++
Sbjct: 119 LGGEFAARLARLVDD 133
>gi|218768948|ref|YP_002343460.1| hypothetical protein NMA2217 [Neisseria meningitidis Z2491]
gi|121052956|emb|CAM09310.1| hypothetical protein NMA2217 [Neisseria meningitidis Z2491]
Length = 241
Score = 37.2 bits (85), Expect = 0.67, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111
>gi|325143108|gb|EGC65455.1| comF/gntX family protein [Neisseria meningitidis 961-5945]
gi|325197553|gb|ADY93009.1| comF/gntX family protein [Neisseria meningitidis G2136]
Length = 241
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111
>gi|198282558|ref|YP_002218879.1| competence protein F [Acidithiobacillus ferrooxidans ATCC 53993]
gi|198247079|gb|ACH82672.1| competence protein F [Acidithiobacillus ferrooxidans ATCC 53993]
Length = 237
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 26/98 (26%), Gaps = 5/98 (5%)
Query: 13 IELFHCIYPSICPIYSRIINLRFC-LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
H ++P C LC C+ + A + D
Sbjct: 16 GRFNHWLFPERCRACG----APGAPLCAGCFGDWPRLPAERCSYCALPLLDNGDCPVCSV 71
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ + + +Y + + K+ R D +A
Sbjct: 72 EAPAYDHVYTPFIYAEPLNTAIIAWKFQRRLDWTRPLA 109
>gi|226227086|ref|YP_002761192.1| hypothetical protein GAU_1680 [Gemmatimonas aurantiaca T-27]
gi|226090277|dbj|BAH38722.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 285
Score = 37.2 bits (85), Expect = 0.68, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 28/130 (21%)
Query: 13 IELFHCIYPSICPIYSR----IINLRFCLCGHCWSKIHFITATEHILKNNKDN------- 61
L + P C + R +CG C +++ +T + +
Sbjct: 12 RSLLDFLMPGACVLCRRPHAPHSTPDGIVCGTCMARVVPLTLPQCYRCGHPRLSLTLALP 71
Query: 62 -IDKDPLKSMQKD---------------LPLTQIRSVTLYC-DMSCVLVRLLKYHDRTDL 104
P ++ + +RSV LV LKY +
Sbjct: 72 PARPAPGEAAAMPSTVELSPCRWCARLAPEIRAVRSVCRMDQGSGGELVHALKYQGWHVV 131
Query: 105 AIMMAQWMFR 114
A MA+ M R
Sbjct: 132 ATPMARRMAR 141
>gi|315226408|ref|ZP_07868196.1| conserved hypothetical protein [Parascardovia denticolens DSM
10105]
gi|315120540|gb|EFT83672.1| conserved hypothetical protein [Parascardovia denticolens DSM
10105]
Length = 238
Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 18/103 (17%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIH-FITATEHILKNNKDNIDKDPLKS 69
+ ++ ++P CP R LC C + F++ + +
Sbjct: 5 FLSDMRFLLFPRCCPGCGR---ADRILCPACSAAFSLFLSRNLYDHSLSGG--------- 52
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
P Q+ S +LY + + K H +L ++M
Sbjct: 53 -----PSLQVHSCSLYQGLVRQTILAWKDHGDVELDGPFGRFM 90
>gi|218249397|ref|YP_002375161.1| hypothetical protein BbuZS7_0681 [Borrelia burgdorferi ZS7]
gi|226321359|ref|ZP_03796886.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
gi|218164585|gb|ACK74646.1| conserved hypothetical protein [Borrelia burgdorferi ZS7]
gi|226233155|gb|EEH31907.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
Length = 118
Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 8/89 (8%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77
C + L +C +C +K+ I + P
Sbjct: 10 CEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVPAFGEGCPNCHYSPFQELKEKPFK 69
Query: 78 QI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104
+ R+ + + VRL + D+
Sbjct: 70 RKERARMVSDRAASKTFVRLFHFGINIDI 98
>gi|325203384|gb|ADY98837.1| comF/gntX family protein [Neisseria meningitidis M01-240355]
Length = 241
Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111
>gi|260655347|ref|ZP_05860835.1| ComF family protein [Jonquetella anthropi E3_33 E1]
gi|260629795|gb|EEX47989.1| ComF family protein [Jonquetella anthropi E3_33 E1]
Length = 217
Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 11/95 (11%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ L H ++P C LC C + + + ++ +K +
Sbjct: 3 LAEALCHLLWPQQCASCGAPGE---ALCSDCEAMLPPRLSPVCLVCGAPAPCKTHGVKYV 59
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
T + + LV KY +LA
Sbjct: 60 LHSR--------TPHEGTARELVLKSKYGRWGELA 86
>gi|257064230|ref|YP_003143902.1| predicted amidophosphoribosyltransferase [Slackia
heliotrinireducens DSM 20476]
gi|256791883|gb|ACV22553.1| predicted amidophosphoribosyltransferase [Slackia
heliotrinireducens DSM 20476]
Length = 230
Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 9/106 (8%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA-TEHILKNNKDNIDKDPLKSMQKD 73
L ++P+ C R LC C + +I A + + + + +
Sbjct: 6 LLETLWPTRCAGCER---AGKVLCDDCIRNMEYIDAYAACPICGDPAGLRVCTRCNAPVE 62
Query: 74 LPLTQI-----RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
P ++ RS ++ + K T L A + R
Sbjct: 63 DPEHRVRTLECRSAAMFTGRMAKAIHAYKDAGETRLYKPFALILAR 108
>gi|326772049|ref|ZP_08231334.1| hypothetical protein HMPREF0059_00431 [Actinomyces viscosus C505]
gi|326638182|gb|EGE39083.1| hypothetical protein HMPREF0059_00431 [Actinomyces viscosus C505]
Length = 230
Score = 37.2 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 19/90 (21%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
P+ C R LC C ++ + A +++ D D
Sbjct: 88 PTSCAGCGRW---ETALCPQC-REL--LEAAPFAVEHADAADDLDIW------------- 128
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
++ Y +V K R DL+ +MA+
Sbjct: 129 ALASYTGPVRTMVLGWKNGAREDLSEVMAR 158
>gi|302185790|ref|ZP_07262463.1| phosphoribosyltransferase [Pseudomonas syringae pv. syringae 642]
Length = 244
Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ TQ+ +
Sbjct: 21 CLLCDERSEVPAPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKRPPGFTQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDGLITRFKH 95
>gi|111220759|ref|YP_711553.1| hypothetical protein FRAAL1302 [Frankia alni ACN14a]
gi|111148291|emb|CAJ59963.1| hypothetical protein; putative Purine/pyrimidine phosphoribosyl
transferase domain [Frankia alni ACN14a]
Length = 291
Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 18/114 (15%)
Query: 1 MPAIIQTVKSIIIE----LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK 56
+P++ + + ++I L + P C +C C +++
Sbjct: 20 LPSMARALLPLLIRNLAILTDLVVPLACAGCG---GRGASVCPACAAELR---------- 66
Query: 57 NNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ + + L +V Y L+ K R D A +
Sbjct: 67 -GPAFLAAAGPMATPRRRGLPPCLAVARYGGRVRSLLLAYKERGRVDAARPLGG 119
>gi|328955032|ref|YP_004372365.1| hypothetical protein Corgl_0432 [Coriobacterium glomerans PW2]
gi|328455356|gb|AEB06550.1| hypothetical protein Corgl_0432 [Coriobacterium glomerans PW2]
Length = 256
Score = 37.2 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 3/103 (2%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
+ P+ C R +L LC C S++ I + +
Sbjct: 28 ALEILSPTRCAACERPGSL---LCDRCRSELSLIDPRHACTACGAPFGELVCTECRGSPT 84
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
L + + ++R+ K LA +A + +
Sbjct: 85 GLDLCLAAAAFEGPLRRVIRVYKDAGERRLAETLAGLIADAVA 127
>gi|304389097|ref|ZP_07371141.1| ComF/gntX family protein [Neisseria meningitidis ATCC 13091]
gi|304336970|gb|EFM03160.1| ComF/gntX family protein [Neisseria meningitidis ATCC 13091]
Length = 241
Score = 37.2 bits (85), Expect = 0.74, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111
>gi|167736936|ref|ZP_02409710.1| putative competence protein [Burkholderia pseudomallei 14]
Length = 111
Score = 37.2 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 27/103 (26%), Gaps = 7/103 (6%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55
+ A+ ++ P+ C + + +C C W++ L
Sbjct: 11 IRAMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+ + P ++ Y L LK+
Sbjct: 69 PGARGATRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKF 111
>gi|261391800|emb|CAX49255.1| putative GntX-like protein [Neisseria meningitidis 8013]
Length = 241
Score = 37.2 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111
>gi|227498003|ref|ZP_03928179.1| competence protein F [Actinomyces urogenitalis DSM 15434]
gi|226832582|gb|EEH64965.1| competence protein F [Actinomyces urogenitalis DSM 15434]
Length = 258
Score = 37.2 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 23/120 (19%)
Query: 1 MPAIIQTVKSIIIELFH----CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILK 56
+PA + V + L H + P+ C LC C S ++
Sbjct: 21 LPAHARRVARWLQRLVHDAAGALIPARCAGCGTW---DTRLCERCRSLLN---------G 68
Query: 57 NNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
+ I D + + I ++ Y LV K R DLA +M + R
Sbjct: 69 PLSEVIHADGAEDLP-------IHALAAYAGPVRALVLGWKNGGREDLAEVMHEAGQRAA 121
>gi|218507208|ref|ZP_03505086.1| competence protein F (phosphoribosyltransferase protein)
[Rhizobium etli Brasil 5]
Length = 49
Score = 37.2 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 7/37 (18%), Positives = 11/37 (29%), Gaps = 1/37 (2%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGH 40
Q ++ L +YP C + LC
Sbjct: 14 RTQLLRPFSA-LADFLYPPACSVCGVSTGGHRGLCAK 49
>gi|114565757|ref|YP_752911.1| phosphoribosyltransferase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336692|gb|ABI67540.1| phosphoribosyltransferase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 239
Score = 37.2 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 40/109 (36%), Gaps = 6/109 (5%)
Query: 11 IIIELFHCIYP-SICPIYSRI--INLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
+I + ++P + C I + R+ C C ++ + + + + +
Sbjct: 1 MIDLIMDILFPQTACYICREPGRYSCRYPWCDACEDEMDRLKKCLSLCDHCGKYLGEGEN 60
Query: 66 -PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
++ Q R+V Y + + V++ K+ R LA M M
Sbjct: 61 LCVECRQNPPSFNIARAVGPYEEPFRIAVKVFKFLGRKQLAKKMGDMMA 109
>gi|296105107|ref|YP_003615253.1| gluconate periplasmic binding protein [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295059566|gb|ADF64304.1| gluconate periplasmic binding protein [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 215
Score = 37.2 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 14/76 (18%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
+C + +R + R C C + + ++K P + + +V
Sbjct: 10 VCSVCTRSLASRITTCPQC--------------GLPAYSPQFPCGRCLKKPPPWSALVAV 55
Query: 83 TLYCDMSCVLVRLLKY 98
Y L+ LK+
Sbjct: 56 DDYVPPLSRLIHALKF 71
>gi|167717917|ref|ZP_02401153.1| putative competence protein [Burkholderia pseudomallei DM98]
Length = 119
Score = 37.2 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 27/104 (25%), Gaps = 7/104 (6%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55
+ + ++ P+ C + + +C C W++ L
Sbjct: 11 IRTMAARAGIVLARFSAAALPNRCALCGNL--SHRTICDCCDGAYWNEARLRCPRCALPL 68
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + + P ++ Y L LK+
Sbjct: 69 PGARGAMRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFR 112
>gi|226320502|ref|ZP_03796068.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
gi|226234144|gb|EEH32859.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
gi|312149147|gb|ADQ29218.1| conserved hypothetical protein [Borrelia burgdorferi N40]
Length = 118
Score = 37.2 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 8/89 (8%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77
C + L +C +C +K+ I + P
Sbjct: 10 CEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69
Query: 78 QI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104
+ R+ + + VRL + D+
Sbjct: 70 RKERARMVSDRAASKTFVRLFHFGINIDI 98
>gi|289674355|ref|ZP_06495245.1| phosphoribosyltransferase [Pseudomonas syringae pv. syringae FF5]
Length = 215
Score = 37.2 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ TQ+ +
Sbjct: 21 CLLCDERSEVPTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDGLITRFKH 95
>gi|124009197|ref|ZP_01693878.1| competence protein [Microscilla marina ATCC 23134]
gi|123985182|gb|EAY25116.1| competence protein [Microscilla marina ATCC 23134]
Length = 241
Score = 37.2 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 13/104 (12%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKN---NKDNIDKDPL 67
+ + F I+P+ C + LC C + H+ K+ ++ + P+
Sbjct: 10 LADFFSLIFPNYCLGCEAPLTKGEKQLCTRCLYDLP--QTNYHLHKDNVLSQRFWGRVPI 67
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111
+ L ++ ++ LKY + M+ W
Sbjct: 68 EYAFAYLKFSKG-------GKVQKILHELKYDHNQTIGEMVGNW 104
>gi|121634139|ref|YP_974384.1| hypothetical protein NMC0263 [Neisseria meningitidis FAM18]
gi|120865845|emb|CAM09577.1| hypothetical protein NMC0263 [Neisseria meningitidis FAM18]
gi|325131587|gb|EGC54294.1| comF/gntX family protein [Neisseria meningitidis M6190]
gi|325139158|gb|EGC61704.1| comF/gntX family protein [Neisseria meningitidis ES14902]
Length = 241
Score = 37.2 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHIQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111
>gi|329944319|ref|ZP_08292578.1| phosphoribosyl transferase domain protein [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328531049|gb|EGF57905.1| phosphoribosyl transferase domain protein [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 285
Score = 37.2 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 26/102 (25%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
P C R LC C ++ + + +++ + D L
Sbjct: 33 PVSCAGCGRW---ETTLCPQC-REL--LESEPFTVEHAEAAGDLAIL------------- 73
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMA-------QWMFRV 115
S+ Y +V K R DL +MA +W R
Sbjct: 74 SLATYTGPMRTMVLGWKNGSREDLTEVMAHSGRRLGRWWARA 115
>gi|59802047|ref|YP_208759.1| hypothetical protein NGO1726 [Neisseria gonorrhoeae FA 1090]
gi|59718942|gb|AAW90347.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
Length = 241
Score = 37.2 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI-HFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79
C + + +C C + + F T + ++ +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLASFRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ Y ++R LK+ +A +A
Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107
>gi|330979909|gb|EGH78209.1| phosphoribosyltransferase [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 244
Score = 36.8 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ TQ+ +
Sbjct: 21 CLLCDERSEVPTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDGLITRFKH 95
>gi|305676148|ref|YP_003867820.1| putative component of the DNA transport apparatus [Bacillus
subtilis subsp. spizizenii str. W23]
gi|305414392|gb|ADM39511.1| putative component of the DNA transport apparatus [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 240
Score = 36.8 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 29/99 (29%), Gaps = 18/99 (18%)
Query: 19 IYPSICPIYSRIINLRFC------------LCGHCWSKIHFITATEHILKNNKDNIDKDP 66
IY IC + + +C C SK+ IT L ++
Sbjct: 9 IYKLICLLCDSPFSQAITWRALFLLKPEEKVCHTCRSKLKKITGHICTLCGRPQSVHAVC 68
Query: 67 LKSMQ------KDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
L L Q RSV Y D+ + K+
Sbjct: 69 KDCEAWKSRVSDSLLLRQNRSVYTYNDVMKETLSRFKFR 107
>gi|209519809|ref|ZP_03268594.1| putative competence protein F-related protein [Burkholderia sp.
H160]
gi|209499752|gb|EDZ99822.1| putative competence protein F-related protein [Burkholderia sp.
H160]
Length = 233
Score = 36.8 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 33/105 (31%), Gaps = 9/105 (8%)
Query: 21 PSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKNNKDNIDKDPLKSMQKD 73
P++C + + +C C W++ + A + + +
Sbjct: 6 PNLCALCGNM--SHKTVCDGCDAAYWNEDRLRCTVCAVPLPASRRVARVQYCCADCVSEP 63
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
++ Y L LK+ R LA AQ + R+ E
Sbjct: 64 PSFDASFALADYRAPLDTLAVGLKFRARLVLARDFAQRLARLAED 108
>gi|300789805|ref|YP_003770096.1| hypothetical protein AMED_7990 [Amycolatopsis mediterranei U32]
gi|299799319|gb|ADJ49694.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
Length = 334
Score = 36.8 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 20/109 (18%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
++ L + PS C C W +
Sbjct: 19 VLKRLLDLLIPSRCAACGARGEPCCARCEDVWGAARELVRAPTAG--------------- 63
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
L ++ ++ Y + L+ K R DLA + + + + +
Sbjct: 64 -----LVRVFALAGYRGVGRKLLIAYKERGRRDLAPSLGRAVAEAVAVL 107
>gi|216264504|ref|ZP_03436496.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
gi|223889407|ref|ZP_03623993.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
gi|224532411|ref|ZP_03673041.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
gi|215980977|gb|EEC21784.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
gi|223885093|gb|EEF56197.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
gi|224512718|gb|EEF83089.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
Length = 118
Score = 36.8 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 8/89 (8%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77
C + L +C +C +K+ I + P
Sbjct: 10 CEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69
Query: 78 QI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104
+ R+ + + VRL + D+
Sbjct: 70 RKERARMISDRAASKTFVRLFHFGINIDI 98
>gi|218887941|ref|YP_002437262.1| phosphoribosyltransferase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758895|gb|ACL09794.1| phosphoribosyltransferase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 274
Score = 36.8 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 12/97 (12%)
Query: 24 CPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
CP + + R +C C H L D + P R
Sbjct: 62 CPACTVALAPRRGGICPRC--------GAPHALSTLP---DSPCGHCLTSPPPWAAFRMH 110
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
LY LV K+ + A ++ + +
Sbjct: 111 GLYEGTLRHLVLRAKFAEDHAAARVLGGLLATACHGL 147
>gi|322830956|ref|YP_004210983.1| phosphoribosyltransferase [Rahnella sp. Y9602]
gi|321166157|gb|ADW71856.1| phosphoribosyltransferase [Rahnella sp. Y9602]
Length = 229
Score = 36.8 bits (84), Expect = 0.90, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Query: 36 CLCGHCWSKIHFITATEHILKNN--KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLV 93
+C C + A L+ D + + K P + + Y LV
Sbjct: 21 GICSLCMKHLP--VAPPCCLRCGLPSSGGHADCGRCLLKPPPWDAMIFASPYEMPVSGLV 78
Query: 94 RLLKYHDRTDLAIMMAQ 110
K+ + +L +A+
Sbjct: 79 LRFKFSRQPELDTTLAR 95
>gi|310765660|gb|ADP10610.1| gluconate periplasmic binding protein [Erwinia sp. Ejp617]
Length = 215
Score = 36.8 bits (84), Expect = 0.90, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Query: 35 FCLCGHCWSKIHFITATEHILKNNK-DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLV 93
LC C ++ + + + +++ P ++ +V+ + LV
Sbjct: 8 HGLCSVCLRQL-LVQPACCPRCGLPAGGSRHECGRCLRRPPPWQRLIAVSAWHPPLSQLV 66
Query: 94 RLLKY 98
LK+
Sbjct: 67 NRLKF 71
>gi|239999818|ref|ZP_04719742.1| hypothetical protein Ngon3_10123 [Neisseria gonorrhoeae 35/02]
gi|254494599|ref|ZP_05107770.1| competence protein [Neisseria gonorrhoeae 1291]
gi|268595627|ref|ZP_06129794.1| competence protein [Neisseria gonorrhoeae 35/02]
gi|293398086|ref|ZP_06642291.1| hypothetical protein NGNG_01641 [Neisseria gonorrhoeae F62]
gi|226513639|gb|EEH62984.1| competence protein [Neisseria gonorrhoeae 1291]
gi|268549016|gb|EEZ44434.1| competence protein [Neisseria gonorrhoeae 35/02]
gi|291611349|gb|EFF40419.1| hypothetical protein NGNG_01641 [Neisseria gonorrhoeae F62]
Length = 241
Score = 36.8 bits (84), Expect = 0.90, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI-HFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79
C + + +C C + + F T + ++ +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLASFRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ Y ++R LK+ +A +A
Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107
>gi|307251278|ref|ZP_07533198.1| hypothetical protein appser4_20380 [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306856676|gb|EFM88812.1| hypothetical protein appser4_20380 [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 225
Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 23/80 (28%), Gaps = 6/80 (7%)
Query: 23 ICPIY-SRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79
C R+ +C C K+ T + +D + ++ + ++
Sbjct: 7 RCIECHKRLQIAEHGICSRCLKKLDI---TPYCSCCGSLLVDNHRYCGECLRNEPKWHRM 63
Query: 80 RSVTLYCDMSCVLVRLLKYH 99
V Y + K+
Sbjct: 64 VRVCRYSAPMTDWIHRFKFQ 83
>gi|253690286|ref|YP_003019476.1| gluconate periplasmic binding protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251756864|gb|ACT14940.1| gluconate periplasmic binding protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 233
Score = 36.8 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 31/75 (41%)
Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95
+C +C + + A + + + +Q P + ++ Y L++
Sbjct: 21 GICSYCQRHLPRLPACCPRCGLPSGDTTRQCGRCLQNPPPWQSMTFISDYAPPLNTLLKH 80
Query: 96 LKYHDRTDLAIMMAQ 110
K+H +T+LA + A+
Sbjct: 81 FKFHGKTELAAVFAR 95
>gi|254671567|emb|CBA09213.1| competence protein F [Neisseria meningitidis alpha153]
Length = 241
Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 25/94 (26%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + ++ +C C + A L +K ++
Sbjct: 18 RCVLCHGSSSVSDGICAGCRDDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111
>gi|239905752|ref|YP_002952491.1| competence protein F [Desulfovibrio magneticus RS-1]
gi|239795616|dbj|BAH74605.1| competence protein F [Desulfovibrio magneticus RS-1]
Length = 249
Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 23/90 (25%), Gaps = 12/90 (13%)
Query: 22 SICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
+CP R+ C C + + L Q P
Sbjct: 36 PLCPACRDRLAPRLGGFCPRC-----------GAMGQDAAATPGLCLDCRQGSRPWDGFA 84
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
Y + LV K+H R ++A
Sbjct: 85 FHGRYEGLLRELVLGFKFHGRLGQGRLLAG 114
>gi|195941481|ref|ZP_03086863.1| hypothetical protein Bbur8_01181 [Borrelia burgdorferi 80a]
gi|221217900|ref|ZP_03589367.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
gi|224533377|ref|ZP_03673971.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
gi|225548847|ref|ZP_03769824.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
gi|225549954|ref|ZP_03770915.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
gi|221192206|gb|EEE18426.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
gi|224513542|gb|EEF83899.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
gi|225369413|gb|EEG98865.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
gi|225370450|gb|EEG99886.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
gi|312148227|gb|ADQ30886.1| conserved hypothetical protein [Borrelia burgdorferi JD1]
Length = 118
Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 8/89 (8%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77
C + L +C +C +K+ I + P
Sbjct: 10 CEQCGEKVGLNRSVCPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69
Query: 78 QI-RSVTLYCDMS-CVLVRLLKYHDRTDL 104
+ R+ + + VRL + D+
Sbjct: 70 RKERARMVSDRAASKTFVRLFHFGINVDI 98
>gi|126731808|ref|ZP_01747612.1| oxidoreductase, short chain dehydrogenase/reductase family protein
[Sagittula stellata E-37]
gi|126707635|gb|EBA06697.1| oxidoreductase, short chain dehydrogenase/reductase family protein
[Sagittula stellata E-37]
Length = 412
Score = 36.8 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 17/92 (18%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS- 81
+C + + C CW ++ + + + + I + LP +
Sbjct: 47 VCSDCGQATYPQRDRCPACWGELSWKDRPDGAVIEAETTIRSSIDLFFKHHLPWRIGAAR 106
Query: 82 --------VTLYCDMSCVLVRLLKYHDRTDLA 105
V L+ D+ DR +A
Sbjct: 107 LDAGPMATVHLHRDVGR--------GDRVRIA 130
>gi|303327518|ref|ZP_07357959.1| competence protein F [Desulfovibrio sp. 3_1_syn3]
gi|302862458|gb|EFL85391.1| competence protein F [Desulfovibrio sp. 3_1_syn3]
Length = 181
Score = 36.8 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 2/100 (2%)
Query: 22 SICPIYSRI-INLRFCLCGHC-WSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
+CP + + C C + T + +++ + +Q+D P +
Sbjct: 48 PLCPECCLLFLPYNGPRCPRCGLPPVEIGTGKQTADASSRPAPLSRCGQCLQEDPPWDGL 107
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
LY + LK+ LA ++ + +
Sbjct: 108 ACYGLYEGALRDALLRLKFGGELSLAPLLGACLLEASRCL 147
>gi|229524697|ref|ZP_04414102.1| hypothetical protein VCA_002298 [Vibrio cholerae bv. albensis
VL426]
gi|229338278|gb|EEO03295.1| hypothetical protein VCA_002298 [Vibrio cholerae bv. albensis
VL426]
Length = 286
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + + + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVEQCGQCLCQAPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ V Y V LKY
Sbjct: 122 RKLMCVGDYRFPLSDAVHQLKYQ 144
>gi|198273952|ref|ZP_03206484.1| hypothetical protein BACPLE_00088 [Bacteroides plebeius DSM 17135]
gi|198273030|gb|EDY97299.1| hypothetical protein BACPLE_00088 [Bacteroides plebeius DSM 17135]
Length = 229
Score = 36.8 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 38/108 (35%), Gaps = 13/108 (12%)
Query: 11 IIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKS 69
I+ ++ ++P +C R + LC C S++ H N + + +
Sbjct: 3 ILTDIRDFLFPRLCMACGRKLQVSEQALCCDCLSQL------PHTHLGNTPGNEMEKIFW 56
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVR---LLKYHDRTDLAIMMAQWMFR 114
+ P+ + S Y + +KY+ R + M + +
Sbjct: 57 GR--FPIQRA-SALFYYARGGKVAHILAGMKYYGRQKVCRQMGEMLAH 101
>gi|75907199|ref|YP_321495.1| hypothetical protein Ava_0976 [Anabaena variabilis ATCC 29413]
gi|75700924|gb|ABA20600.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 229
Score = 36.8 bits (84), Expect = 0.97, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 18/106 (16%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
T L S CP+ R + LC +C ++ + D + K P
Sbjct: 3 TWNQRFQGLLDLFLQSNCPLCQRPTSTE--LCPNCTKQLQ------KCRHTHPDGLWKQP 54
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ + LY + L+KY ++ +A + QW+
Sbjct: 55 I------PVFSWG----LYGGTLKRAIALMKYDNQPQIARPLGQWL 90
>gi|298345533|ref|YP_003718220.1| hypothetical protein HMPREF0573_10407 [Mobiluncus curtisii ATCC
43063]
gi|298235594|gb|ADI66726.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
Length = 259
Score = 36.8 bits (84), Expect = 1.00, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 16/92 (17%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
EL + P+ C +C C +++ L+ ++D ++
Sbjct: 12 GELGKVLLPTECVGCGAW---DEEICDTCLAQM---LGCPFPLQISED------DDNVTD 59
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
++ Y +V K+ R DL
Sbjct: 60 VPVF----AIAKYDGPMRRVVLTGKHDKRRDL 87
>gi|17230418|ref|NP_486966.1| hypothetical protein alr2926 [Nostoc sp. PCC 7120]
gi|17132020|dbj|BAB74625.1| alr2926 [Nostoc sp. PCC 7120]
Length = 229
Score = 36.8 bits (84), Expect = 1.00, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 32/101 (31%), Gaps = 18/101 (17%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
L S CP+ R + LC +C ++ K + Q
Sbjct: 8 FQGLLDLFLQSNCPLCQRPTSTE--LCPNCTRQLQ------------KCHHKHPHALWKQ 53
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ LY + L+KY ++ +A + QW+
Sbjct: 54 PIPVFSWG----LYGGTLKRAIALMKYDNQPQIARPLGQWL 90
>gi|332520156|ref|ZP_08396620.1| phosphoribosyltransferase [Lacinutrix algicola 5H-3-7-4]
gi|332044715|gb|EGI80909.1| phosphoribosyltransferase [Lacinutrix algicola 5H-3-7-4]
Length = 225
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 37/105 (35%), Gaps = 11/105 (10%)
Query: 11 IIIELFHCIYPSICPIYSRII-NLRFCLCGHCWSKIHFITATEHILKNN--KDNIDKDPL 67
+I L + +P +C ++ + +C C + +T + K + L
Sbjct: 1 MINSLINLFFPKVCSACKLLLNDNEKYICTTCRHNLP-VTNYHKTNDDFVKKVFYGRAKL 59
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
+ L + + L+ LKY ++ + + +W+
Sbjct: 60 EQATALLRFEK-------KGIVQQLLHDLKYREQQQIGTFLGKWL 97
>gi|153802206|ref|ZP_01956792.1| ComF family protein [Vibrio cholerae MZO-3]
gi|124122280|gb|EAY41023.1| ComF family protein [Vibrio cholerae MZO-3]
Length = 286
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 9/83 (10%)
Query: 22 SICPIYSRI--INLRFCLCGHC--WSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPL 76
C + N F +C C W + D + + + P
Sbjct: 66 PECHLCRLALDTNSPFGVCSACQAWLE----HGYRCARCGLPTLTPVDQCGQCLGQPPPW 121
Query: 77 TQIRSVTLYCDMSCVLVRLLKYH 99
++ + Y V LKY
Sbjct: 122 RKLMCIGGYRFPLSDAVHQLKYQ 144
>gi|330447158|ref|ZP_08310808.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491349|dbj|GAA05305.1| gluconate periplasmic binding protein with
phosphoribosyltransferase domain, GNT I system
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 235
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 4/89 (4%)
Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQIRS 81
C + + C HC + HF ++ + + + + P ++
Sbjct: 22 CSLCQLPLEPNDDYWCQHCLN--HFPSSPYCHRCGTSTFQNVEYCGLCLAEPPPWHRLYR 79
Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ Y L+ K+ + LA +A+
Sbjct: 80 LGEYQPPLQQLISQYKFGKKFWLAKPLAR 108
>gi|15676193|ref|NP_273325.1| competence protein [Neisseria meningitidis MC58]
gi|7225493|gb|AAF40723.1| competence protein [Neisseria meningitidis MC58]
gi|316985199|gb|EFV64151.1| competence protein [Neisseria meningitidis H44/76]
gi|325141105|gb|EGC63608.1| comF/gntX family protein [Neisseria meningitidis CU385]
gi|325199472|gb|ADY94927.1| comF/gntX family protein [Neisseria meningitidis H44/76]
Length = 241
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHIQGGSVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIHALKHLADLSMVQPLADLMM 111
>gi|330967246|gb|EGH67506.1| competence protein ComF [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 244
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 23/75 (30%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ Q+ +
Sbjct: 21 CLLCDERSEVPAPICVPCEAELPWLGNQCEHCALPLPVFGLSCGQCSKRPPAFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPIDSLITRFKH 95
>gi|308175277|ref|YP_003921982.1| competence protein FC [Bacillus amyloliquefaciens DSM 7]
gi|307608141|emb|CBI44512.1| competence protein FC [Bacillus amyloliquefaciens DSM 7]
gi|328555250|gb|AEB25742.1| competence protein FC [Bacillus amyloliquefaciens TA208]
Length = 225
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLP------LTQIRSVTLYCDMSC 90
+C C ++ I L +K M ++ L Q RSV LY D
Sbjct: 24 VCSACSNQFEKIEGPVCSLCGRPQQSNKKCADCMARESKTEQRFLLRQNRSVFLYNDAMK 83
Query: 91 VLVRLLKYH 99
+ K+
Sbjct: 84 DSLARFKFR 92
>gi|311111734|ref|YP_003982956.1| competence protein F [Rothia dentocariosa ATCC 17931]
gi|310943228|gb|ADP39522.1| competence protein F [Rothia dentocariosa ATCC 17931]
Length = 274
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 22/121 (18%)
Query: 6 QTVKSIIIELFHCIYPSICPIYS-------RIINLRFCLCGHCWSKIHFITATEHILKNN 58
+ K + ++ +P+ C R LC C + + T+ H
Sbjct: 7 KRGKKALYAVWELFFPATCVGCGVGGTALLDAAGTRRALCTRCETSLRKQTSAVHT---- 62
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+Q +P + +Y ++ +K RTD +A+ + R +
Sbjct: 63 ---------PVLQHPVP--GAVAAGIYEKTLAHVILSMKNAGRTDAVPELARALGRAVAT 111
Query: 119 I 119
I
Sbjct: 112 I 112
>gi|197286754|ref|YP_002152626.1| gluconate metabolism protein [Proteus mirabilis HI4320]
gi|194684241|emb|CAR45762.1| putative gluconate metabolism protein [Proteus mirabilis HI4320]
Length = 230
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 6/97 (6%)
Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + + + +C C + + + ++ Q+ +V
Sbjct: 9 CWLCRQPLRYGNHSICSSCIRHLPQQNNRCPGCLYPSTHSMILCGRCLRSPPRWKQMLTV 68
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMA-----QWMFR 114
T Y L+ L KYH R +A+ +A +W+
Sbjct: 69 TDYRPPLNKLLHLYKYHPRPQIALCLAKLFLLRWLAH 105
>gi|88705178|ref|ZP_01102889.1| conserved hypothetical protein [Congregibacter litoralis KT71]
gi|88700268|gb|EAQ97376.1| conserved hypothetical protein [Congregibacter litoralis KT71]
Length = 239
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 30/93 (32%), Gaps = 1/93 (1%)
Query: 6 QTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
+K + +L + P C + + + +C C + + D +
Sbjct: 4 SVIKGFVRDLLDYLAPQRCIYCDQPSHRQERICEVC-EDALILNDSACPRCALPDMGARL 62
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
+++D L + + +Y + KY
Sbjct: 63 CPGCLERDPALKSVTAAFVYDAAIAYFIHRWKY 95
>gi|315656135|ref|ZP_07909026.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315493137|gb|EFU82737.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 259
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 16/92 (17%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
EL + P+ C +C C +++ L+ ++D ++
Sbjct: 12 GELGKVLLPTECVGCGAW---DEEICDTCLAQM---LGCPFPLQISED------DDNVTD 59
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
++ Y +V K+ R DL
Sbjct: 60 VPVF----AIAKYDGPMRRVVLTGKHDKRRDL 87
>gi|28867723|ref|NP_790342.1| competence protein ComF [Pseudomonas syringae pv. tomato str.
DC3000]
gi|28850958|gb|AAO54037.1| competence protein ComF, putative [Pseudomonas syringae pv.
tomato str. DC3000]
gi|331015040|gb|EGH95096.1| competence protein ComF, putative [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 244
Score = 36.4 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 23/76 (30%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + + +C C +++ ++ + ++ Q+ +
Sbjct: 20 TCLLCDERSEVPAPICVPCEAELPWLGEQCEYCALPLPVFGLSCGQCSKRPPAFAQVVAP 79
Query: 83 TLYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 80 WLYEFPIDSLITRFKH 95
>gi|213967736|ref|ZP_03395883.1| competence protein ComF [Pseudomonas syringae pv. tomato T1]
gi|301382373|ref|ZP_07230791.1| competence protein ComF, putative [Pseudomonas syringae pv.
tomato Max13]
gi|302062356|ref|ZP_07253897.1| competence protein ComF, putative [Pseudomonas syringae pv.
tomato K40]
gi|302130674|ref|ZP_07256664.1| competence protein ComF, putative [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213927512|gb|EEB61060.1| competence protein ComF [Pseudomonas syringae pv. tomato T1]
Length = 244
Score = 36.4 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 24/76 (31%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + + +C C +++ ++ + ++ Q+ +
Sbjct: 20 ICLLCDERSEVPAPICVPCEAELPWLGDQCEYCALPLPVFGLSCGQCSKRPPAFAQVVAP 79
Query: 83 TLYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 80 WLYEFPIDSLITRFKH 95
>gi|14590587|ref|NP_142655.1| hypothetical protein PH0709 [Pyrococcus horikoshii OT3]
gi|11387255|sp|O58440|VAPC6_PYRHO RecName: Full=Putative toxin VapC6
gi|3257117|dbj|BAA29800.1| 161aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 161
Score = 36.4 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINL--RFCLCGHCWSKIHFITA 50
+T+K I ++ Y +C R + +C C SK+ I
Sbjct: 113 RFRTLKRGIKKVIKWRY--VCIGCGRKFSTLPPGGVCPDCGSKVKLIPR 159
>gi|223939761|ref|ZP_03631632.1| serine/threonine protein kinase [bacterium Ellin514]
gi|223891537|gb|EEF58027.1| serine/threonine protein kinase [bacterium Ellin514]
Length = 725
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 23 ICPIYSRII--NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
ICP + + + LC C K F T + K ++ + K P +I
Sbjct: 6 ICPTCGKAVVPDAPQGLCPECLIKSGFETKAGNEPAGGKSAFVPPTVEQIAKLFPQFEIN 65
Query: 81 SVTLYCDMS 89
+ + M
Sbjct: 66 ELLGHGGMG 74
>gi|269103900|ref|ZP_06156597.1| hypothetical ComF-related protein [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163798|gb|EEZ42294.1| hypothetical ComF-related protein [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 249
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 26/90 (28%), Gaps = 13/90 (14%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C R I C C + + + + + P +
Sbjct: 35 CDNCRRHIEQLH-YCQRCGATLT------------QSASTLTCGRCLVSPPPWHHFYRLG 81
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
L+ +V K+ + LA +AQW+
Sbjct: 82 LHQFPLKQVVHPFKFQRQFYLAAPLAQWLA 111
>gi|254805688|ref|YP_003083909.1| competence protein [Neisseria meningitidis alpha14]
gi|254669229|emb|CBA08067.1| competence protein [Neisseria meningitidis alpha14]
Length = 241
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 24/94 (25%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHIQGGAVCGICQRKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++ LK+ + +A M
Sbjct: 78 WASLHYEPPVSNIIHALKHLADLSMVQPLADLMM 111
>gi|330956967|gb|EGH57227.1| competence protein ComF [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 244
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 25/76 (32%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + + +C C +++ ++ + ++ ++ Q+ +
Sbjct: 20 TCLLCDERSEVPAPVCVPCEAELPWLGDQCERCALPMPIAGLECVQCSKRSPAFAQVIAP 79
Query: 83 TLYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 80 WLYDFPVDSLITRFKH 95
>gi|260437436|ref|ZP_05791252.1| putative competence protein [Butyrivibrio crossotus DSM 2876]
gi|292810068|gb|EFF69273.1| putative competence protein [Butyrivibrio crossotus DSM 2876]
Length = 224
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 37 LCGHCWSKIHFITATEH--ILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVR 94
+C C SKI +I K +D+ + + K + + Y +
Sbjct: 17 ICPGCRSKITYIKQPVCYRCGKQLEDDEQEYCHDCVVKQHNFKRGVAAFSYSQGMKKSMY 76
Query: 95 LLKYHDRTDLAIMMA 109
KY++R + A A
Sbjct: 77 AFKYNNRREYAKYYA 91
>gi|294786783|ref|ZP_06752037.1| conserved hypothetical protein [Parascardovia denticolens F0305]
gi|294485616|gb|EFG33250.1| conserved hypothetical protein [Parascardovia denticolens F0305]
Length = 230
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 18/96 (18%)
Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIH-FITATEHILKNNKDNIDKDPLKSMQKDLPL 76
++P CP R LC C + F++ + + P
Sbjct: 4 LLFPRCCPGCGR---ADRILCPACSAAFSLFLSRNLYDHSLSGG--------------PS 46
Query: 77 TQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
Q+ S +LY + + K H +L ++M
Sbjct: 47 LQVHSCSLYQGLVRQTILAWKDHGDVELDGPFGRFM 82
>gi|134102878|ref|YP_001108539.1| hypothetical protein SACE_6444 [Saccharopolyspora erythraea NRRL
2338]
gi|133915501|emb|CAM05614.1| hypothetical protein SACE_6444 [Saccharopolyspora erythraea NRRL
2338]
Length = 297
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 28/116 (24%), Gaps = 20/116 (17%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+ ++ + L ++P C R LCG C +
Sbjct: 1 MPTRLRDALSSLVDLLFPLHCAGCRR---RGASLCGECARDL-------------GGLHR 44
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ L Y + V K + LA + + L I
Sbjct: 45 QRRLLLPPAPPAYALG----GYRGSARRAVLAYKEAGQRHLAAPFGERLATGLRGI 96
>gi|330874793|gb|EGH08942.1| competence protein ComF [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 244
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 23/75 (30%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ Q+ +
Sbjct: 21 CLLCDERSEVPAPICVPCEAELPWLGNQCEHCALPLPVFGLSCGQCSKRPPAFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPIDSLITRFKH 95
>gi|312131270|ref|YP_003998610.1| phosphoribosyltransferase [Leadbetterella byssophila DSM 17132]
gi|311907816|gb|ADQ18257.1| phosphoribosyltransferase [Leadbetterella byssophila DSM 17132]
Length = 226
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 17/106 (16%)
Query: 14 ELFHCIYPSICPIY-SRIINLRFCLCGHC-WSKIHFITATEHILKNN---KDNIDKDPLK 68
L +P C +I +C C WS L+ + K +
Sbjct: 11 SLLDFFFPRFCVACEKQITEWESAICLPCFWS-----MPRYSALQMDHLRSKFWGKVKIH 65
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ L + +V ++ +KY ++ +LAI + Q M R
Sbjct: 66 GVFAYLKFQKGNAV-------QDVLHAIKYKNQRELAIWLGQSMGR 104
>gi|227112202|ref|ZP_03825858.1| gluconate periplasmic binding protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 233
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 31/75 (41%)
Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95
+C +C + + + + +Q P I ++ Y L++
Sbjct: 21 GICSYCQRHLPRLPLCCPRCGLPSTDTTHQCGRCLQNPPPWQSITFISDYVPPFNTLLKH 80
Query: 96 LKYHDRTDLAIMMAQ 110
LK+H +T+LA ++A+
Sbjct: 81 LKFHGKTELAAVLAR 95
>gi|224532241|ref|ZP_03672873.1| conserved hypothetical protein [Borrelia valaisiana VS116]
gi|224511706|gb|EEF82112.1| conserved hypothetical protein [Borrelia valaisiana VS116]
Length = 118
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 7/82 (8%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77
C + L +C +C +K+ I + P
Sbjct: 10 CEQCGEKVGLNRSICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69
Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98
+ R + + + L +
Sbjct: 70 RKERIRMVSGGVVSRVFVRLFH 91
>gi|5921548|emb|CAB56477.1| competence protein ComF [Pseudomonas stutzeri]
Length = 235
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 28/91 (30%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + LC C +++ ++ + I + ++ +
Sbjct: 12 CQLCDERCEPGQSLCPGCETELPWLGSQCSICALPLPVAGAVCGECLKHPPAFDHVAVPW 71
Query: 84 LYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
+ L+ K+ R ++A+ + R
Sbjct: 72 RFAFPVDSLITRFKHQSRWPFGRLLAEHLAR 102
>gi|29348209|ref|NP_811712.1| putative amidophosphoribosyl-transferase [Bacteroides
thetaiotaomicron VPI-5482]
gi|29340112|gb|AAO77906.1| putative amidophosphoribosyl-transferase [Bacteroides
thetaiotaomicron VPI-5482]
Length = 235
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ +P C + + C+C C + D K
Sbjct: 11 LYSFLSLWFPRCCVVCGGSLAKGEECICTMC--------NINLPRTDYHLRKDNPVEKLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
PL + S Y S ++ LKY + ++ +M ++M
Sbjct: 63 WGKFPLERATSFFFYRKGSDFRQVLHQLKYGGQKEIGAIMGRYMA 107
>gi|256833043|ref|YP_003161770.1| amidophosphoribosyltransferase-like protein [Jonesia denitrificans
DSM 20603]
gi|256686574|gb|ACV09467.1| amidophosphoribosyltransferase-like protein [Jonesia denitrificans
DSM 20603]
Length = 255
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 30/101 (29%), Gaps = 11/101 (10%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+ I EL + P CP + LC C +H +
Sbjct: 5 TSRLTHRIGAELGRLLIPQYCPGCGAL---DTSLCPICTRTLH--------QPPTRVEHH 53
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
L + P+ + +++ Y + K H R DL
Sbjct: 54 IPRLARIDNHPPILPVWALSPYDGPVRHIFTAWKDHGRGDL 94
>gi|37524220|ref|NP_927564.1| gluconate periplasmic binding protein [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36783643|emb|CAE12494.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 227
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 29/77 (37%)
Query: 34 RFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLV 93
+C C ++ + + + ++K + ++T YC L+
Sbjct: 19 HHGVCSFCNKRLKRLANMCPCCALPSELPSLPCGRCLKKPPLWENMIAITDYCPPLSGLI 78
Query: 94 RLLKYHDRTDLAIMMAQ 110
R KYH LA ++A+
Sbjct: 79 RRYKYHRTPQLASVLAR 95
>gi|221065311|ref|ZP_03541416.1| ComF family protein [Comamonas testosteroni KF-1]
gi|220710334|gb|EED65702.1| ComF family protein [Comamonas testosteroni KF-1]
Length = 254
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Query: 21 PSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
PS C + R R +C C ++ H ++ +++ L +
Sbjct: 32 PSQCAVCGRWPGPR--ICHDCQARWARQKHRCHSCALPLPSLVSLCGSCLKQPPRLKRCT 89
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
SV Y L+ K+ LA + + M
Sbjct: 90 SVLDYAYPWQDLITRYKFQADLGLARSLGRLMA 122
>gi|254429751|ref|ZP_05043458.1| hypothetical protein ADG881_2981 [Alcanivorax sp. DG881]
gi|196195920|gb|EDX90879.1| hypothetical protein ADG881_2981 [Alcanivorax sp. DG881]
Length = 248
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 12/98 (12%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHIL--------KNNKDNIDKDP 66
LF+ I PS C + + + LC C + +T D++
Sbjct: 17 LFNHINPSPCTLCGQ--SESGALCVDCLHLLARLTVPVCRCGLPHGNEQPVEADSVPPLC 74
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
+ +++ P + ++ Y L+ K+ R DL
Sbjct: 75 GRCIRQPPPFSASQAPLQYTFPIDALITRYKH--RADL 110
>gi|253569488|ref|ZP_04846898.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251841507|gb|EES69588.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 235
Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 11/105 (10%)
Query: 12 IIELFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
+ +P C + + C+C C + D K
Sbjct: 11 LYSFLSLWFPRCCVVCGGSLAKGEECICTMC--------NINLPRTDYHLRKDNPVEKLF 62
Query: 71 QKDLPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
PL + S Y S ++ LKY + ++ +M ++M
Sbjct: 63 WGKFPLERATSFFFYRKGSDFRQVLHQLKYGGQKEIGAIMGRYMA 107
>gi|326792660|ref|YP_004310481.1| phosphoribosyltransferase [Clostridium lentocellum DSM 5427]
gi|326543424|gb|ADZ85283.1| phosphoribosyltransferase [Clostridium lentocellum DSM 5427]
Length = 238
Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 6/93 (6%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRF--CLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
+ L IYP C I ++++ LC C+S H + I+ +
Sbjct: 4 FLGRLKKLIYPDKCTICRKLLSAETKEVLCDRCYS--HLLKENLCNRCGRPYKIEYEGCL 61
Query: 69 SMQKDLPLTQIRSVTL--YCDMSCVLVRLLKYH 99
+++ R++ L YCD V KY
Sbjct: 62 CCKEEEDSMVKRTIGLFPYCDHYRKAVLRWKYR 94
>gi|219684373|ref|ZP_03539317.1| conserved hypothetical protein [Borrelia garinii PBr]
gi|219685698|ref|ZP_03540511.1| conserved hypothetical protein [Borrelia garinii Far04]
gi|219672362|gb|EED29415.1| conserved hypothetical protein [Borrelia garinii PBr]
gi|219672748|gb|EED29774.1| conserved hypothetical protein [Borrelia garinii Far04]
Length = 118
Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 19/82 (23%), Gaps = 7/82 (8%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD------LPLT 77
C + L +C +C +K+ I + P
Sbjct: 10 CEQCGEKVGLNRSICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPFQELKEKPFK 69
Query: 78 QI-RSVTLYCDMSCVLVRLLKY 98
+ R + + L +
Sbjct: 70 RKERVRIAGDGVVSKVFVRLFH 91
>gi|167579698|ref|ZP_02372572.1| ComF family protein [Burkholderia thailandensis TXDOH]
Length = 119
Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 7/111 (6%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF-ITATEHIL 55
+ A V ++ P+ C + + +C C W++ L
Sbjct: 11 IRAAAARVGIVLARFSAAALPNRCALCGNL--SHRTICDCCDDAYWNEARLRCPRCALPL 68
Query: 56 KNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAI 106
+ + + ++ Y L LK+ R L
Sbjct: 69 PGARGAMRYRCGACARMPPRFDATLALADYRAPLDSLALDLKFRARLALGR 119
>gi|299140246|ref|ZP_07033412.1| phosphoribosyltransferase [Acidobacterium sp. MP5ACTX8]
gi|298597785|gb|EFI53957.1| phosphoribosyltransferase [Acidobacterium sp. MP5ACTX8]
Length = 359
Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/110 (11%), Positives = 36/110 (32%), Gaps = 12/110 (10%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINL--RFCLCGHCWSKIHFITATEHILKNN 58
+ + + + +L + I+PS C + + + +C C + + T +
Sbjct: 69 LRSSRTAMGGAVADLVNVIFPSDCRVCGAPMVALSKAQVCEACVACVGAQTDVLCSRCGD 128
Query: 59 KDNIDK----------DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKY 98
++ + + + +Y D ++ LLK+
Sbjct: 129 ALGMESARFAAGMGMTECTMCRLAPPEFAKAVAFAVYDDEVREMLHLLKF 178
>gi|149277499|ref|ZP_01883640.1| putative amidophosphoribosyl-transferase [Pedobacter sp. BAL39]
gi|149231732|gb|EDM37110.1| putative amidophosphoribosyl-transferase [Pedobacter sp. BAL39]
Length = 232
Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 7/102 (6%)
Query: 9 KSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPL 67
+ I L ++P+IC + + LC C + + H+ +NK N
Sbjct: 5 RRWITALVRLLFPNICLACNTELYAGEHLLCSRCRYSLPYTD--HHLFIDNKVNRQLWGR 62
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ R ++ +KYH +T L M+
Sbjct: 63 IPSPNAMAFLHFRK----GGRVQQIMHQIKYHHQTVLGAMLG 100
>gi|290969085|ref|ZP_06560618.1| ComF family protein [Megasphaera genomosp. type_1 str. 28L]
gi|290780882|gb|EFD93477.1| ComF family protein [Megasphaera genomosp. type_1 str. 28L]
Length = 220
Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 16/83 (19%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHC---WSK---------IHFITATEHI----LKNN 58
L +YP CP + ++ + C C W I F+ A +
Sbjct: 9 LNTMLYPPRCPGCNGLLRPQQHWCHACKRKWGDGRRLQRQGNIRFLDAIYCVASYRGPVG 68
Query: 59 KDNIDKDPLKSMQKDLPLTQIRS 81
D +D P ++ S
Sbjct: 69 NGLRDLKYGAHSGQDDPWRELLS 91
>gi|120437851|ref|YP_863537.1| phosphoribosyltransferases family protein [Gramella forsetii
KT0803]
gi|117580001|emb|CAL68470.1| phosphoribosyltransferases family protein [Gramella forsetii
KT0803]
Length = 226
Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 14 ELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
+ + +YPS+C I ++ +C C + IT+ +N + +K +
Sbjct: 4 DFINLLYPSVCHICDAELLKNEELICTSCLHDLP-ITSYHLDNENPVIKVFYGRVKIEKA 62
Query: 73 DLPLTQIRSVTLY---CDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ L+ L+ LKY ++ QW+ +++
Sbjct: 63 --------TALLHFRKKAGVQQLIHDLKYRGYREIGTYFGQWL---GKEL 101
>gi|261856677|ref|YP_003263960.1| phosphoribosyltransferase [Halothiobacillus neapolitanus c2]
gi|261837146|gb|ACX96913.1| phosphoribosyltransferase [Halothiobacillus neapolitanus c2]
Length = 247
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 24/93 (25%), Gaps = 6/93 (6%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI-----DKDP 66
+ L + P+ C + LC C + + + I +
Sbjct: 4 LAGLTRFLVPAPCYLCGTASVAVDGLCARCADDLS-TENRAVPHRCPQCAIQVSEAGQRC 62
Query: 67 LKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++ + + S L+ KY
Sbjct: 63 AACLRHPPSFDFSVAGQDFKTASRFLIHQFKYR 95
>gi|240017422|ref|ZP_04723962.1| hypothetical protein NgonFA_09723 [Neisseria gonorrhoeae FA6140]
gi|240113843|ref|ZP_04728333.1| hypothetical protein NgonM_09808 [Neisseria gonorrhoeae MS11]
gi|240118801|ref|ZP_04732863.1| hypothetical protein NgonPID_10159 [Neisseria gonorrhoeae PID1]
gi|240126552|ref|ZP_04739438.1| hypothetical protein NgonSK_10160 [Neisseria gonorrhoeae SK-92-679]
gi|260439662|ref|ZP_05793478.1| hypothetical protein NgonDG_00973 [Neisseria gonorrhoeae DGI2]
gi|268599910|ref|ZP_06134077.1| competence protein [Neisseria gonorrhoeae MS11]
gi|268604511|ref|ZP_06138678.1| competence protein [Neisseria gonorrhoeae PID1]
gi|268685131|ref|ZP_06151993.1| competence protein [Neisseria gonorrhoeae SK-92-679]
gi|291042904|ref|ZP_06568645.1| competence protein [Neisseria gonorrhoeae DGI2]
gi|268584041|gb|EEZ48717.1| competence protein [Neisseria gonorrhoeae MS11]
gi|268588642|gb|EEZ53318.1| competence protein [Neisseria gonorrhoeae PID1]
gi|268625415|gb|EEZ57815.1| competence protein [Neisseria gonorrhoeae SK-92-679]
gi|291013338|gb|EFE05304.1| competence protein [Neisseria gonorrhoeae DGI2]
Length = 241
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCAADLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ Y ++R LK+ +A +A
Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107
>gi|254523283|ref|ZP_05135338.1| competence protein F [Stenotrophomonas sp. SKA14]
gi|219720874|gb|EED39399.1| competence protein F [Stenotrophomonas sp. SKA14]
Length = 256
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 5/114 (4%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEH-ILKNNKDNI 62
++ + + L + P C + S + LC C++ + + D
Sbjct: 30 VLHSASAASHALLRVLLPLRCLVCSDPGHDGLDLCAACFAALPWSGRACLRCALPLPDTA 89
Query: 63 DKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA--IMMAQWMFR 114
++ P + LY L+ K+H DLA ++AQ M R
Sbjct: 90 LIVCGSCREEAPPQAATHASLLYLPPVDQLLVRYKFH--QDLAAGRLLAQLMQR 141
>gi|115374718|ref|ZP_01461995.1| hypothetical protein STIAU_7546 [Stigmatella aurantiaca DW4/3-1]
gi|310822708|ref|YP_003955066.1| hypothetical protein STAUR_5469 [Stigmatella aurantiaca DW4/3-1]
gi|115368289|gb|EAU67247.1| hypothetical protein STIAU_7546 [Stigmatella aurantiaca DW4/3-1]
gi|309395780|gb|ADO73239.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 346
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 20/64 (31%), Gaps = 5/64 (7%)
Query: 24 CPIYSRIINLRFCLCGHC--WSKIHFITATEHILKNNKD---NIDKDPLKSMQKDLPLTQ 78
CP + +C C F+++ + D +DP ++ P +
Sbjct: 14 CPGCGTQVADGTSICPKCDYIIDASFLSSDPPPGGQDDDEVTGAGQDPRQAAPSPRPARR 73
Query: 79 IRSV 82
+
Sbjct: 74 APTA 77
>gi|317494417|ref|ZP_07952831.1| comF family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917667|gb|EFV39012.1| comF family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 227
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 3/94 (3%)
Query: 22 SICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQI 79
+ C I + + +C C + T + + K + +QK Q+
Sbjct: 6 ARCWICQLPLRVPIQGICSFC-TSASLNTLSVCPRCGLPNGDPKRVCGRCIQKPPYWQQL 64
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
V+ Y L+ LKY + + +A+ M
Sbjct: 65 IFVSDYQPPLSQLIHRLKYQGKWQIGSALARLML 98
>gi|254247125|ref|ZP_04940446.1| hypothetical protein BCPG_01904 [Burkholderia cenocepacia PC184]
gi|124871901|gb|EAY63617.1| hypothetical protein BCPG_01904 [Burkholderia cenocepacia PC184]
Length = 265
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 43/135 (31%), Gaps = 19/135 (14%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEH 53
+ ++ V+++ + + + P+ C + + +CG C W++ + A
Sbjct: 10 LRVVLSQVRTLAVRVAAVMLPNRCALCGNL--SHAVICGACDAAYWNEAQLRCEVCALPL 67
Query: 54 ILK----------NNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
+ P ++ Y L R LK+H R
Sbjct: 68 GVGHARSRGGSRSGTARAAAYRCETCRTAPPPFDATLALADYRAPLDGLARGLKFHARLA 127
Query: 104 LAIMMAQWMFRVLEK 118
L A + R+++
Sbjct: 128 LGGEFAARLARLVDD 142
>gi|156936424|ref|YP_001440340.1| hypothetical protein ESA_04325 [Cronobacter sakazakii ATCC BAA-894]
gi|156534678|gb|ABU79504.1| hypothetical protein ESA_04325 [Cronobacter sakazakii ATCC BAA-894]
Length = 186
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102
+ +QK ++ + + Y LV LK+ RT
Sbjct: 9 PCGRCLQKPPVWQRLLAASDYAPPVSGLVHQLKFQGRT 46
>gi|315655990|ref|ZP_07908888.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
gi|315490054|gb|EFU79681.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
Length = 259
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 16/92 (17%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
EL + P+ C +C C +++ + ++
Sbjct: 12 GELGKVLLPTECVGCGAW---DEEICDTCLAQM-----LGCPYP----LQISEDDDNVTD 59
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
++ Y +V K+ R DL
Sbjct: 60 VPVF----AIAKYDGPMRRVVLTGKHDKRRDL 87
>gi|285017173|ref|YP_003374884.1| amidophosphoribosyltransferase [Xanthomonas albilineans GPE PC73]
gi|283472391|emb|CBA14896.1| putative competence protein (amidophosphoribosyltransferases)
[Xanthomonas albilineans]
Length = 243
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 2/99 (2%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT--EHILKNNKD 60
AI V L + P C + + LC C + + L
Sbjct: 8 AIANRVDGCWRWLQRRLLPERCLVCTEPGAPGLDLCPACCDALPWNAHACRHCALPLPGL 67
Query: 61 NIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ D+ + PL + S +Y L+R K+H
Sbjct: 68 DADQLCGACQRCPPPLHLVVSACVYAAPVDGLLRRFKFH 106
>gi|221195723|ref|ZP_03568777.1| amidophosphoribosyltransferase family protein [Atopobium rimae ATCC
49626]
gi|221184489|gb|EEE16882.1| amidophosphoribosyltransferase family protein [Atopobium rimae ATCC
49626]
Length = 275
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 10/110 (9%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
+ ++ + C L LC C SK+ +I + + +
Sbjct: 40 VSELLWQTRCVACDMPGEL---LCKECISKLPWIEQRWACPNCGAPFGSLVCSECITRKE 96
Query: 75 P---LTQIRS---VTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
P RS + +V LK LA ++A + LE+
Sbjct: 97 PHVVWES-RSTVCAMGFKGPPARIVTNLKDAHELRLAPVVAAAILTALEE 145
>gi|104161989|emb|CAJ75698.1| predicted amidophosphoribosyltransferases [uncultured Thermotogales
bacterium]
Length = 212
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 18/100 (18%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
++ + P+ C + R I+ LC C + I P+ +
Sbjct: 4 MLKSVISYFLPNYCLVCEREIDPNDYLCKDCLTSIR------------------GPIMAP 45
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ L + S Y L+R K+ DR +A + A+
Sbjct: 46 VELLNIDSAHSYWKYESPMKELIRAYKFGDRPGVARLFAK 85
>gi|325205353|gb|ADZ00806.1| comF/gntX family protein [Neisseria meningitidis M04-240196]
Length = 241
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 29/94 (30%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI-HFITATEHILKNNKDNIDKD--PLKSMQKDLPLTQI 79
C + + +C C + + F T + ++ +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLASFRTDAANSCPLCFMHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++R LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMVQPLADLMM 111
>gi|240949768|ref|ZP_04754100.1| competence protein F [Actinobacillus minor NM305]
gi|240295800|gb|EER46487.1| competence protein F [Actinobacillus minor NM305]
Length = 229
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Query: 23 ICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNI--DKDPLKSMQKDLPLTQI 79
C R ++ C C + IT + + + ++ + +I
Sbjct: 7 RCFHCDRPLMIASHGFCSQCIKE---ITISPYCGHCGATLAENSLSCGECLRNEPKWQRI 63
Query: 80 RSVTLYCDMSCVLVRLLKYHDR 101
+ LY ++ K+
Sbjct: 64 VQIALYKPPLADWIQRFKFQQH 85
>gi|302342707|ref|YP_003807236.1| phosphoribosyltransferase [Desulfarculus baarsii DSM 2075]
gi|301639320|gb|ADK84642.1| phosphoribosyltransferase [Desulfarculus baarsii DSM 2075]
Length = 225
Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKI-HFITATEHILKNNKDNI 62
+ ++ ++ L +P+ CP R + LC C +++ + + + + +
Sbjct: 1 MPPSLAALGRGLLELAFPARCPACGRPAHG-GGLCAACLAQVEPTVEPSLEPIDSLSFAV 59
Query: 63 DKDPLKSMQKDLPLTQIR 80
K + Q R
Sbjct: 60 AKHAGPAAQCVRAFKYRR 77
>gi|295097022|emb|CBK86112.1| Predicted amidophosphoribosyltransferases [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 210
Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95
+C C + ++ + + ++K P + + +V Y LV
Sbjct: 5 GVCSVCTRALGYLKGCPQCGLP-AVSQTLPCGRCLKKAPPWSALVAVDDYVLPLSRLVHQ 63
Query: 96 LKYHDRT 102
K+ +T
Sbjct: 64 FKFSSQT 70
>gi|330898835|gb|EGH30254.1| phosphoribosyltransferase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 244
Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ TQ+ +
Sbjct: 21 CLLCDERSEVSTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDGLITRFKH 95
>gi|325130995|gb|EGC53722.1| comF/gntX family protein [Neisseria meningitidis OX99.30304]
gi|325137094|gb|EGC59690.1| comF/gntX family protein [Neisseria meningitidis M0579]
gi|325202904|gb|ADY98358.1| comF/gntX family protein [Neisseria meningitidis M01-240149]
gi|325207297|gb|ADZ02749.1| comF/gntX family protein [Neisseria meningitidis NZ-05/33]
Length = 241
Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 25/94 (26%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRDDLAAYRTDAANSCPLCFRHIQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++R LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIRTLKHLADLGMVRPLANLMV 111
>gi|304407699|ref|ZP_07389350.1| amidophosphoribosyltransferase-like protein [Paenibacillus
curdlanolyticus YK9]
gi|304343182|gb|EFM09025.1| amidophosphoribosyltransferase-like protein [Paenibacillus
curdlanolyticus YK9]
Length = 300
Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 5/84 (5%)
Query: 37 LCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLP-LTQIRSVTLYCDMSCVLVRL 95
LC C ++ +I A + ++ RS Y D + L
Sbjct: 60 LCKSCSEQLPWINAIACAVCGRPG----PCNDCARRSEAYFISNRSAVRYDDRIRECLAL 115
Query: 96 LKYHDRTDLAIMMAQWMFRVLEKI 119
KY L+ ++ + ++
Sbjct: 116 FKYRGDEKLSAPLSDLLAYAFRRL 139
>gi|229816413|ref|ZP_04446715.1| hypothetical protein COLINT_03467 [Collinsella intestinalis DSM
13280]
gi|229808008|gb|EEP43808.1| hypothetical protein COLINT_03467 [Collinsella intestinalis DSM
13280]
Length = 78
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 20/72 (27%)
Query: 45 IHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
+ FI L + L + + ++ +VR K L
Sbjct: 1 MQFIDPARCCLHCGAPFGAMVCTECAGAKTDLDRCLAAAVFDGPVGRIVRAYKDGGERRL 60
Query: 105 AIMMAQWMFRVL 116
A +A+ M
Sbjct: 61 AAEIARIMLSAA 72
>gi|66047912|ref|YP_237753.1| phosphoribosyltransferase [Pseudomonas syringae pv. syringae
B728a]
gi|63258619|gb|AAY39715.1| Phosphoribosyltransferase [Pseudomonas syringae pv. syringae
B728a]
gi|330970893|gb|EGH70959.1| phosphoribosyltransferase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 244
Score = 35.7 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ TQ+ +
Sbjct: 21 CLLCDERSEVPAPICVPCEAELPWLGNACECCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDGLITRFKH 95
>gi|307544761|ref|YP_003897240.1| competence protein F [Halomonas elongata DSM 2581]
gi|307216785|emb|CBV42055.1| competence protein F [Halomonas elongata DSM 2581]
Length = 267
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 9/90 (10%), Positives = 22/90 (24%), Gaps = 2/90 (2%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITA--TEHILKNNKDNIDKDPLKS 69
+ + + P C C C + + + + +
Sbjct: 42 VDDWLRRLLPGRCAFCLAACESTAPWCQACHLALPWNLPACPACAEPQPAGSRARRCGRC 101
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+Q+ R Y L++ K+
Sbjct: 102 LQRAPAFDTARVPLRYEGELRGLMQGFKFQ 131
>gi|320331599|gb|EFW87537.1| competence protein ComF [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330872324|gb|EGH06473.1| competence protein ComF [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 244
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + + ++ Q+ +
Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDSLITRFKH 95
>gi|320326429|gb|EFW82482.1| competence protein ComF [Pseudomonas syringae pv. glycinea str.
B076]
Length = 244
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + + ++ Q+ +
Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDSLITRFKH 95
>gi|171060486|ref|YP_001792835.1| putative phosphoribosyl transferase [Leptothrix cholodnii SP-6]
gi|170777931|gb|ACB36070.1| putative phosphoribosyl transferase [Leptothrix cholodnii SP-6]
Length = 266
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 40/114 (35%), Gaps = 6/114 (5%)
Query: 4 IIQTVKSIIIELFHC--IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDN 61
+++ + + + C + S+C + R R LC C +H +
Sbjct: 23 VLRAAGRTLADAWRCGPAFGSLCRVCRRW--QRSALCEPCLR-LHAAPVPRCGRCAIEVA 79
Query: 62 ID-KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
M++ P++ + Y L+ K+++ +LA + M R
Sbjct: 80 TGVAQCADCMRRPPPMSATFAAVDYGYPWDALIARFKFNEAVELARPLTGLMTR 133
>gi|330938548|gb|EGH42131.1| phosphoribosyltransferase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 244
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ TQ+ +
Sbjct: 21 CLLCDERSEVSTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQPPGFTQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDGLITRFKH 95
>gi|303238037|ref|ZP_07324580.1| ComF family protein [Prevotella disiens FB035-09AN]
gi|302481827|gb|EFL44879.1| ComF family protein [Prevotella disiens FB035-09AN]
Length = 234
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKD 65
T S + LF + P CP+ R ++ LC C + H ++ ++
Sbjct: 2 TQISFLTRLFDLLAPRACPMCGRRLSISEQPLCAAC--NLALPRTNYH-----ENALENP 54
Query: 66 PLKSMQKDLPLTQIRSVTLYC--DMSCVLVRLLKYHDRTDL 104
+ P+ + + Y + L+ LKY D ++
Sbjct: 55 VARLFWGKFPIEKGAAFLFYKPHSSTSRLIYKLKYFDSPEI 95
>gi|221135017|ref|ZP_03561320.1| competence protein [Glaciecola sp. HTCC2999]
Length = 241
Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 5/92 (5%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID---KDPLKSMQKDLPLTQI 79
C + + +C C + F+ A + N++ + + + +
Sbjct: 11 RCLLCLQSTEQ--VICPLCLADCGFVNAPLLTQDLVEFNLNDTTEHFAHDVIVNAKFDGL 68
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQW 111
+ +Y VL+ LK++ + LA +MAQW
Sbjct: 69 WVLDIYQYPLSVLIPKLKFYQQPHLARLMAQW 100
>gi|71734602|ref|YP_276823.1| competence protein ComF [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71555155|gb|AAZ34366.1| competence protein ComF [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 244
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + + +C C +++ ++ + + ++ Q+ +
Sbjct: 21 CLLCNERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDSLITRFKH 95
>gi|261823347|ref|YP_003261453.1| gluconate periplasmic binding protein [Pectobacterium wasabiae
WPP163]
gi|261607360|gb|ACX89846.1| gluconate periplasmic binding protein [Pectobacterium wasabiae
WPP163]
Length = 233
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 31/75 (41%)
Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95
+C +C + + + + + +Q P + ++ Y L++
Sbjct: 21 GICSYCQRHLPRLPTCCPRCGLPAGDTTRQCGRCLQNPPPWQSMTFISDYTPPINTLLKH 80
Query: 96 LKYHDRTDLAIMMAQ 110
K++ +T+LA ++A+
Sbjct: 81 FKFNGKTELAAVLAR 95
>gi|269128237|ref|YP_003301607.1| phosphoribosyltransferase [Thermomonospora curvata DSM 43183]
gi|268313195|gb|ACY99569.1| phosphoribosyltransferase [Thermomonospora curvata DSM 43183]
Length = 244
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 19/118 (16%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRII----NLRFCLCGHCWSKIHFITATEHILKNNK 59
+ + + + +L + P C + + L C +
Sbjct: 5 VTRFLAGFLADLLDLVLPQHCAGCGAAVLRAGSSPRGLGPLC--------------PVCR 50
Query: 60 DNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ P ++ +P SV Y ++ K R LA + + + R +
Sbjct: 51 AALTGPPRRAGPAGMPFASW-SVADYEGPVRAMLNAYKEAGRVSLADPLGEALARAVR 107
>gi|148656009|ref|YP_001276214.1| amidophosphoribosyltransferase-like protein [Roseiflexus sp. RS-1]
gi|148568119|gb|ABQ90264.1| amidophosphoribosyltransferase-like protein [Roseiflexus sp. RS-1]
Length = 215
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 28/98 (28%), Gaps = 20/98 (20%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
I L + P C ++ LC C ++ + +
Sbjct: 7 IDHLLSLLLPDRCVGCGQL---GALLCDACRRRL-------VAYDGDLPRVADQ------ 50
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
LT ++ ++ V LKY R +A +
Sbjct: 51 ----LTGVQVAYVFDGALRQAVHQLKYRSRQRMARPLG 84
>gi|89076067|ref|ZP_01162427.1| hypothetical ComF-related protein [Photobacterium sp. SKA34]
gi|89048219|gb|EAR53801.1| hypothetical ComF-related protein [Photobacterium sp. SKA34]
Length = 235
Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 4/89 (4%)
Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHI-LKNNKDNIDKDPLKSMQKDLPLTQIRS 81
C + + C +C S F + + N ++ + + P ++
Sbjct: 22 CSLCQLPLEPNDDYWCHYCLS--QFPSPPYCQRCGTSTLNAEQYCGQCLTTPPPWQRLYR 79
Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ Y LV K+ + LA +A+
Sbjct: 80 LGEYQPPLPQLVSQFKFGKKFWLAKPLAK 108
>gi|300741841|ref|ZP_07071862.1| competence protein F [Rothia dentocariosa M567]
gi|300381026|gb|EFJ77588.1| competence protein F [Rothia dentocariosa M567]
Length = 274
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 22/121 (18%)
Query: 6 QTVKSIIIELFHCIYPSICPIYS-------RIINLRFCLCGHCWSKIHFITATEHILKNN 58
+ K + + +P+ C R LC C + + T+ H
Sbjct: 7 KRGKKALYAAWELFFPATCVGCGVGGTALLDAAGTRRALCTRCETSLRKQTSAVHT---- 62
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+Q +P + +Y ++ +K RTD +A+ + R +
Sbjct: 63 ---------PVLQHPVP--GAVAAGIYETTLAHVILSMKNAGRTDAVPELARALGRAVAT 111
Query: 119 I 119
I
Sbjct: 112 I 112
>gi|330985850|gb|EGH83953.1| competence protein ComF [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 244
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + + ++ Q+ +
Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDSLITRFKH 95
>gi|289624783|ref|ZP_06457737.1| competence protein ComF [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289650640|ref|ZP_06481983.1| competence protein ComF [Pseudomonas syringae pv. aesculi str.
2250]
gi|330871186|gb|EGH05895.1| competence protein ComF [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 244
Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + + ++ Q+ +
Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDSLITRFKH 95
>gi|309789992|ref|ZP_07684568.1| amidophosphoribosyltransferase-like protein [Oscillochloris
trichoides DG6]
gi|308228012|gb|EFO81664.1| amidophosphoribosyltransferase-like protein [Oscillochloris
trichoides DG6]
Length = 212
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 24/104 (23%)
Query: 15 LFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
L ++P C + L C C + + + L + +D
Sbjct: 4 LLALLFPDRCVGCGHL----GALFCPTCRAALR-----PYPLDDPPPGLD-------AML 47
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+P LY + +KY + LA + + L
Sbjct: 48 VPW-------LYAGPLRQAIHRMKYRSQRRLAAPLGDLLAEALR 84
>gi|258406303|ref|YP_003199045.1| competence protein F [Desulfohalobium retbaense DSM 5692]
gi|257798530|gb|ACV69467.1| competence protein F [Desulfohalobium retbaense DSM 5692]
Length = 256
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 25/107 (23%), Gaps = 7/107 (6%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI 62
+ VK+ L + P C +++ C F +
Sbjct: 11 GVADAVKTWSRRLAGRLAPGRCLYCGAVLDAPGAGESLCHRCAPFFAPRPGGFCPGCGQL 70
Query: 63 DKD-------PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102
+D P Q+ +Y ++ K R
Sbjct: 71 LEDEAAPLHLCRSCRDAPQPWEQLAFFGVYQGPLREVILEYKLQGRL 117
>gi|78045138|ref|YP_360958.1| CRISPR-associated Csm1 family protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77997253|gb|ABB16152.1| CRISPR-associated protein, Csm1 family [Carboxydothermus
hydrogenoformans Z-2901]
Length = 738
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 6/37 (16%)
Query: 11 IIIELFHCIYPS------ICPIYSRIINLRFCLCGHC 41
+I E I+ ICPI R + LC C
Sbjct: 360 LIKETPDLIFGPFDTPDNICPICGREVTGETGLCSFC 396
>gi|78067648|ref|YP_370417.1| phosphoribosyltransferase [Burkholderia sp. 383]
gi|77968393|gb|ABB09773.1| Phosphoribosyltransferase [Burkholderia sp. 383]
Length = 263
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 17/129 (13%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF--------- 47
M + V+++ + P+ C + + +CG C W++
Sbjct: 10 MRVALSQVRALGARVAAVALPNRCALCGNM--SHAVVCGACDAAYWNEARLRCDVCALPL 67
Query: 48 -ITATEHILKNNKDNIDK-DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
I + P ++ Y L R LK+H + L
Sbjct: 68 GIGQPRSPRGARAGRVAAYRCDACRAAPPPFDATLALADYRAPLDGLARGLKFHRQLALG 127
Query: 106 IMMAQWMFR 114
A + R
Sbjct: 128 TEFAARLAR 136
>gi|257784788|ref|YP_003180005.1| amidophosphoribosyltransferase-like protein [Atopobium parvulum DSM
20469]
gi|257473295|gb|ACV51414.1| amidophosphoribosyltransferase-like protein [Atopobium parvulum DSM
20469]
Length = 249
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 12/103 (11%)
Query: 14 ELFHCIYPSICPIYSRIINLRFCL-CGHCWSKIHFIT---ATEHILKNNKDNIDKDPLKS 69
+ P+ C + L C C SK+ +IT A + + + +
Sbjct: 13 STLELLAPTRCVVC----EKPGQLLCDECQSKLPWITQRWACPNCGAPYGKLVCSECMDK 68
Query: 70 MQKDLPLTQIRS---VTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
++ + R+ + L+ LK LA ++A
Sbjct: 69 KKRPVQWES-RAVICAMGFKGPPARLILTLKDGYELRLAPIIA 110
>gi|307728346|ref|YP_003905570.1| phosphoribosyltransferase [Burkholderia sp. CCGE1003]
gi|307582881|gb|ADN56279.1| phosphoribosyltransferase [Burkholderia sp. CCGE1003]
Length = 233
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 31/110 (28%), Gaps = 9/110 (8%)
Query: 16 FHCIYPSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKNNKDNIDKDPLK 68
+ P+ C + + LC C W+ + A +
Sbjct: 1 MQALLPNACALCGNL--SHRPLCAFCDESYWNDGALRCRVCAVPLPVTFRGRRTSYRCGD 58
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ P ++ Y L LK+ + LA A+ + + +
Sbjct: 59 CSSEMPPFDATFALADYRAPLDALAVGLKFRAQLMLAGEFARRLAHLAQD 108
>gi|257483057|ref|ZP_05637098.1| competence protein ComF [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331011709|gb|EGH91765.1| competence protein ComF [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 244
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 24/75 (32%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + + ++ Q+ +
Sbjct: 21 CLLCDERSEVPMPVCVPCEAELPWLGSQCDCCALPLPLSGMSCAQCCKRPPGFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDSLITRFKH 95
>gi|315178825|gb|ADT85739.1| ComF family protein [Vibrio furnissii NCTC 11218]
Length = 233
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 7/92 (7%)
Query: 22 SICPIYSRIINLRFC--LCGHCWSKIHFITATEHI--LKNNKDNIDKDPLKSMQKDLPLT 77
C + ++ LC C + + T ++ + + P
Sbjct: 16 PACQLCGLALHAPTKPRLCAAC---LAWYAPTPRCARCGLPCESATAQCGQCLSTPPPWH 72
Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
Q+ V Y V LKY + A +A
Sbjct: 73 QLVCVGDYRFPLSHSVHQLKYQRQFWQARPLA 104
>gi|296134288|ref|YP_003641535.1| phosphoribosyltransferase [Thermincola sp. JR]
gi|296032866|gb|ADG83634.1| phosphoribosyltransferase [Thermincola potens JR]
Length = 251
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 4/83 (4%)
Query: 32 NLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD----PLKSMQKDLPLTQIRSVTLYCD 87
C C ++ + + D K + ++ +Y
Sbjct: 25 EYEGDCCSRCLEELMENQMLSCRVCGRFFSKSPDEERVCHACRNKAPAYSFAKAAGIYDG 84
Query: 88 MSCVLVRLLKYHDRTDLAIMMAQ 110
+ LLKY + LA ++A+
Sbjct: 85 RLREAIHLLKYTGKQSLADLLAR 107
>gi|227327614|ref|ZP_03831638.1| gluconate periplasmic binding protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 233
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKD-PLKSMQKDLPLTQIRSVTLYCDMSCVLVR 94
+C +C + + + +Q P + ++ Y L++
Sbjct: 21 GICSYCQRHLPRL-PLCCPRCGLPSADTTHQCGRCLQNPPPWQSMTFISDYAPPFNTLLK 79
Query: 95 LLKYHDRTDLAIMMAQ 110
K+H +T+LA ++A+
Sbjct: 80 HFKFHGKTELAAVLAR 95
>gi|152997461|ref|YP_001342296.1| K+-dependent Na+/Ca+ exchanger related-protein [Marinomonas sp.
MWYL1]
gi|150838385|gb|ABR72361.1| K+-dependent Na+/Ca+ exchanger related-protein [Marinomonas sp.
MWYL1]
Length = 250
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 5/108 (4%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
I E++ ++ + C I + I + LC C K + +
Sbjct: 11 ISEVYKRLFLNQCYICN--IKCQSSLCHPCHKGFPANLKHCQHCKRPTNRNHVSCGQCQT 68
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P + + + L+ +K++ T + M+R+ + +
Sbjct: 69 NPPPYRTCIAPYRFEGIIKTLIHSIKFNQGTHYIRPL---MYRLSKHL 113
>gi|332285810|ref|YP_004417721.1| hypothetical protein PT7_2557 [Pusillimonas sp. T7-7]
gi|330429763|gb|AEC21097.1| hypothetical protein PT7_2557 [Pusillimonas sp. T7-7]
Length = 246
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 40/119 (33%), Gaps = 7/119 (5%)
Query: 3 AIIQTVKSIIIELFHCIYPSICPIYSRIINLRFC-LCGHCWSKI--HFITAT-EHILKNN 58
A + ++ L + P++C + + LCG+C+ + ++ +
Sbjct: 2 AYLPALREFTARLLARV-PAVCGLCHD--SAYGGQLCGYCYQAVTQSMVSGALRCQVCQL 58
Query: 59 KDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLE 117
+ Q ++ + Y +L+ LK + A M+A + +
Sbjct: 59 ALDSQGACPDCTQHTPAFDRVIAAFDYAAPGDLLIHRLKVQRQFTSANMLAGLLADAVR 117
>gi|90412701|ref|ZP_01220702.1| hypothetical ComF-related protein [Photobacterium profundum 3TCK]
gi|90326276|gb|EAS42695.1| hypothetical ComF-related protein [Photobacterium profundum 3TCK]
Length = 237
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Query: 23 ICPIYSRIINLRFCL-CGHCWSKIHFITATEHILKNNKDNIDK--DPLKSMQKDLPLTQI 79
C + + + C HC + H + ++ + ++ P ++
Sbjct: 23 QCQLCQLPLPDNESIWCRHCIAHFP---QPPHCTRCGTTTVNPVEQCGQCLRSPPPWHRL 79
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ Y ++ LK++ + LA +A
Sbjct: 80 YRLGEYDFPLKQIIHQLKFNGKFWLAKPLA 109
>gi|240014974|ref|ZP_04721887.1| hypothetical protein NgonD_10105 [Neisseria gonorrhoeae DGI18]
gi|240081564|ref|ZP_04726107.1| hypothetical protein NgonF_09685 [Neisseria gonorrhoeae FA19]
gi|240116577|ref|ZP_04730639.1| hypothetical protein NgonPID1_10148 [Neisseria gonorrhoeae PID18]
gi|240122043|ref|ZP_04735005.1| hypothetical protein NgonPI_09815 [Neisseria gonorrhoeae PID24-1]
gi|240129014|ref|ZP_04741675.1| hypothetical protein NgonS_10394 [Neisseria gonorrhoeae SK-93-1035]
gi|268597659|ref|ZP_06131826.1| competence protein [Neisseria gonorrhoeae FA19]
gi|268602245|ref|ZP_06136412.1| competence protein [Neisseria gonorrhoeae PID18]
gi|268687393|ref|ZP_06154255.1| competence protein [Neisseria gonorrhoeae SK-93-1035]
gi|268551447|gb|EEZ46466.1| competence protein [Neisseria gonorrhoeae FA19]
gi|268586376|gb|EEZ51052.1| competence protein [Neisseria gonorrhoeae PID18]
gi|268627677|gb|EEZ60077.1| competence protein [Neisseria gonorrhoeae SK-93-1035]
Length = 241
Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ Y ++R LK+ +A +A
Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107
>gi|220910542|ref|YP_002485853.1| hypothetical protein Cyan7425_5199 [Cyanothece sp. PCC 7425]
gi|219867153|gb|ACL47492.1| conserved hypothetical protein [Cyanothece sp. PCC 7425]
Length = 243
Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 16/105 (15%)
Query: 11 IIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSM 70
I+ + ++ C R LC HC ++ K + + P
Sbjct: 6 ILRKWLPFLFYYRCSFCQRKSAQP--LCRHCLPQV----------KTCQLSASVYPHFWS 53
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
R Y ++ LKY ++ LA + +W+
Sbjct: 54 THPPLFPWGR----YGGALKRIISDLKYKNQPQLARPLGEWLGEA 94
>gi|294101669|ref|YP_003553527.1| amidophosphoribosyltransferase-like protein [Aminobacterium
colombiense DSM 12261]
gi|293616649|gb|ADE56803.1| amidophosphoribosyltransferase-like protein [Aminobacterium
colombiense DSM 12261]
Length = 212
Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 22/102 (21%)
Query: 9 KSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLK 68
+++ + H ++P CP+ RI + C C + I +
Sbjct: 3 RNLKRWVEHFLWPVECPVCGRIASTG---CLSCLENL--IHNPIIRELGGDLTLMSGS-- 55
Query: 69 SMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ D LV LKY L ++M Q
Sbjct: 56 ---------------THHDTCRDLVLRLKYRGYGQLGVVMGQ 82
>gi|116622521|ref|YP_824677.1| phosphoribosyltransferase [Candidatus Solibacter usitatus
Ellin6076]
gi|116225683|gb|ABJ84392.1| phosphoribosyltransferase [Candidatus Solibacter usitatus
Ellin6076]
Length = 224
Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 22/95 (23%), Gaps = 10/95 (10%)
Query: 22 SICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRS 81
C F C C + F + + +
Sbjct: 3 PRCIQAPEPFEAEF-YCVSC--RTPF-------QNAFPLDDNGRCALCRSGLRGFDAAYA 52
Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVL 116
Y L+ L KY LA + + + R +
Sbjct: 53 FGAYEGALRRLIHLFKYGKIRTLARPLGRLLARAM 87
>gi|323452160|gb|EGB08035.1| hypothetical protein AURANDRAFT_71712 [Aureococcus anophagefferens]
Length = 902
Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 21/77 (27%), Gaps = 2/77 (2%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKD 60
+P+ F IY S + + + W+K H + L
Sbjct: 295 LPSYYARAFPRNEVAFSLIYASATLVCGALSSSVGGAIADRWAKTH--SGAHGFLPAVGA 352
Query: 61 NIDKDPLKSMQKDLPLT 77
+ P +M +
Sbjct: 353 LLSIGPTAAMFYVPSFS 369
>gi|298386098|ref|ZP_06995655.1| competence protein F-related protein [Bacteroides sp. 1_1_14]
gi|298261326|gb|EFI04193.1| competence protein F-related protein [Bacteroides sp. 1_1_14]
Length = 226
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 11/102 (10%)
Query: 15 LFHCIYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD 73
+P C + + C+C C + D K
Sbjct: 5 FLSLWFPRCCVVCGGSLAKGEECICTMC--------NINLPRTDYHLRKDNPVEKLFWGK 56
Query: 74 LPLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
PL + S Y S ++ LKY + ++ +M ++M
Sbjct: 57 FPLERATSFFFYRKGSDFRQVLHQLKYGGQKEIGAIMGRYMA 98
>gi|77461398|ref|YP_350905.1| phosphoribosyltransferase [Pseudomonas fluorescens Pf0-1]
gi|77385401|gb|ABA76914.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 246
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 7/75 (9%), Positives = 20/75 (26%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + + +C C + + ++ +Q+ +
Sbjct: 21 CLLCDEPADAQIPICTACETDLPWLGDQCLTCALPLPAYGLTCGGCLQEPPAFETVAVPW 80
Query: 84 LYCDMSCVLVRLLKY 98
Y L+ K+
Sbjct: 81 TYSFPVDTLITRFKH 95
>gi|308071112|ref|YP_003872717.1| amidophosphoribosyltransferase [Paenibacillus polymyxa E681]
gi|305860391|gb|ADM72179.1| Predicted amidophosphoribosyltransferase [Paenibacillus polymyxa
E681]
Length = 275
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 4/100 (4%)
Query: 23 ICPIYSRIINLRF---CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C +C C +I ++ + D +K +
Sbjct: 21 TCIACGTFTGRFSEFSGICTSCSLQIPWVYNIRCVHCGRPTFC-PDCVKFDRLVRYFVCN 79
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
RS T Y M + KY ++ + M R + +
Sbjct: 80 RSATSYTPMMREWIGQFKYRGNEKYGSLLGEIMNRAYQAM 119
>gi|219849420|ref|YP_002463853.1| amidophosphoribosyltransferase-like protein [Chloroflexus aggregans
DSM 9485]
gi|219543679|gb|ACL25417.1| amidophosphoribosyltransferase-like protein [Chloroflexus aggregans
DSM 9485]
Length = 207
Score = 35.3 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 27/101 (26%), Gaps = 21/101 (20%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQ 78
++P C R+ F C +C + + P LT
Sbjct: 5 LFPDYCAGCGRLTGELF--CANCRALLR-------------------PYPPFPPPTGLTA 43
Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
R Y + LKY R +A + + +
Sbjct: 44 ARVAFRYEGGLAHAIHRLKYGHRRRIARPLGDLLAAAAGPL 84
>gi|299768652|ref|YP_003730678.1| putative DNA transformation protein (ComF) [Acinetobacter sp.
DR1]
gi|298698740|gb|ADI89305.1| putative DNA transformation protein (ComF) [Acinetobacter sp.
DR1]
Length = 209
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITAT 51
L + P C + + + LC CW ++ ++ T
Sbjct: 8 QHLIQLLSP--CLLCESDVREKHSLCKDCWKQLPWLKQT 44
>gi|73540017|ref|YP_294537.1| putative amidophosphoribosyltransferase [Ralstonia eutropha
JMP134]
gi|72117430|gb|AAZ59693.1| putative amidophosphoribosyltransferases [Ralstonia eutropha
JMP134]
Length = 222
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 24/85 (28%), Gaps = 5/85 (5%)
Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKIHF-ITATEHILKNNKDNIDKDPLKSMQKDL 74
+ P C + +C C +++ + ++ + Q
Sbjct: 1 MRKLLPCACALCG--TVQDEVVCRDCVAELLYPVSRCPVCAMGLAPG--EPCRACAQHRP 56
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYH 99
+ ++ Y LV LKY
Sbjct: 57 DFDRAFTLGDYGIPQDSLVLALKYG 81
>gi|170734195|ref|YP_001766142.1| phosphoribosyltransferase [Burkholderia cenocepacia MC0-3]
gi|169817437|gb|ACA92020.1| phosphoribosyltransferase [Burkholderia cenocepacia MC0-3]
Length = 265
Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 21/136 (15%)
Query: 1 MPAIIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHC----WSKIHFITATEHILK 56
+ ++ V+++ + + P+ C + + +CG C W++ + L
Sbjct: 10 LRVVLSQVRTLAVRVAAATLPNRCALCGNL--SHAVICGACDAAYWNEAQ-LRCEVCALP 66
Query: 57 NNKDNIDK--------------DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRT 102
+ P ++ Y L R LK+H R
Sbjct: 67 LGVGHARSAGGGRLGAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGLKFHARL 126
Query: 103 DLAIMMAQWMFRVLEK 118
L A + R+++
Sbjct: 127 ALGGEFAARLARLVDD 142
>gi|325680291|ref|ZP_08159851.1| hypothetical protein CUS_5773 [Ruminococcus albus 8]
gi|324108000|gb|EGC02256.1| hypothetical protein CUS_5773 [Ruminococcus albus 8]
Length = 270
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFIT 49
CP+ + + LC C S++ FI
Sbjct: 3 CPMCGKSVGDHDALCPSCGSEL-FID 27
>gi|167585365|ref|ZP_02377753.1| phosphoribosyltransferase [Burkholderia ubonensis Bu]
Length = 172
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 31/105 (29%), Gaps = 9/105 (8%)
Query: 21 PSICPIYSRIINLRFCLCGHC----WSKIHF---ITATEHILKNNKDNIDKDPLKSMQKD 73
P C + + +C C W++ + A + +
Sbjct: 27 PYRCALCGNM--SHTVICAGCDAAYWNEARLRCAVCAVPLAPGHARRAAGYRCDACRAAP 84
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
P ++ Y L R LK+H R L A + R+L
Sbjct: 85 PPFDATLALADYRAPLDGLARGLKFHARLALGAEFAGRLARLLAD 129
>gi|311745081|ref|ZP_07718866.1| competence protein F-related protein [Algoriphagus sp. PR1]
gi|126577594|gb|EAZ81814.1| competence protein F-related protein [Algoriphagus sp. PR1]
Length = 230
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 19 IYPSICPIYSR-IINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77
I+P C + R + + CLC C + T + ++++ Q L ++
Sbjct: 13 IFPRNCDLCGRSLFDFESCLCKICVGMLP---KTIYHQMPAENDLTDKLKGLSQIGLAMS 69
Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLA 105
+R +S L+ LKY ++ ++A
Sbjct: 70 FLR--FTKNGVSQKLLHRLKYRNKPEIA 95
>gi|213026624|ref|ZP_03341071.1| gluconate periplasmic binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 49
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 70 MQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
MQK P ++ SV+ Y +LV LK+ R+++
Sbjct: 1 MQKPPPWQRLVSVSDYTPPLSLLVHQLKFTRRSEI 35
>gi|167031407|ref|YP_001666638.1| phosphoribosyltransferase [Pseudomonas putida GB-1]
gi|166857895|gb|ABY96302.1| phosphoribosyltransferase [Pseudomonas putida GB-1]
Length = 243
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 30/88 (34%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + R+ LC C ++ ++ + ++ Q+ ++
Sbjct: 20 TCLLCDEPAEQRYPLCTACEQELPWLGDHCQHCALPLPMAGLTCAQCCRRLPAFDQVIAL 79
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
Y L+ K++ + + +MA+
Sbjct: 80 WHYGFPVDTLISRFKHNRQWPVGRLMAE 107
>gi|297181074|gb|ADI17273.1| hypothetical protein [uncultured alpha proteobacterium
HF0070_17D04]
Length = 91
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 85 YCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
Y D+S L+ K+ D L + M R
Sbjct: 33 YKDVSRKLILAFKHGDGLQLTPFLKSLMAR 62
>gi|268682965|ref|ZP_06149827.1| competence protein [Neisseria gonorrhoeae PID332]
gi|268623249|gb|EEZ55649.1| competence protein [Neisseria gonorrhoeae PID332]
Length = 199
Score = 35.3 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/90 (13%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCNTDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
+ Y ++R LK+ +A +A
Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMAQPLA 107
>gi|253995944|ref|YP_003048008.1| hypothetical protein Mmol_0571 [Methylotenera mobilis JLW8]
gi|253982623|gb|ACT47481.1| conserved hypothetical protein [Methylotenera mobilis JLW8]
Length = 253
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 7/100 (7%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDK----DPLKSMQKDLPLTQ 78
C + + LC C + + + + N + + +
Sbjct: 30 TCMLCTSRHGGDLGLCAPCMADLPWHQTAQCPQCALAINDNLYGGGLCGGCLSEPPSFDA 89
Query: 79 IRSVTLYCDMSCVLVRLLKYHDRTDLAI-MMAQWM--FRV 115
R+ Y L++ KY+ +LA W+ R
Sbjct: 90 TRATFTYNYPLDGLLQHYKYNASLNLARTFATLWLDAQRA 129
>gi|283852706|ref|ZP_06369971.1| phosphoribosyltransferase [Desulfovibrio sp. FW1012B]
gi|283571884|gb|EFC19879.1| phosphoribosyltransferase [Desulfovibrio sp. FW1012B]
Length = 254
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 9/100 (9%), Positives = 25/100 (25%), Gaps = 7/100 (7%)
Query: 23 ICPIYSRIINLR---FCLCGHCWSKIHFITATEHILKN----NKDNIDKDPLKSMQKDLP 75
C + ++ +C C +++ + +
Sbjct: 25 RCQVCHGLLTGPAGAGSVCPACAARLAPRLGGHCPRCGELAEDPAAPPLVCPACLAGGRS 84
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
Y + LV K++ R ++A ++
Sbjct: 85 WDGFAFHGRYEGLLRDLVLGFKFNGRLGQGRLLAGFLAEA 124
>gi|126666962|ref|ZP_01737938.1| probable phosphoribosyl transferase [Marinobacter sp. ELB17]
gi|126628678|gb|EAZ99299.1| probable phosphoribosyl transferase [Marinobacter sp. ELB17]
Length = 252
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 24/88 (27%), Gaps = 3/88 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHF--ITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
C + LC C++ + + L D + +Q+
Sbjct: 32 RCVGCLNPVARN-GLCQGCYNDLPWNRWHCRCCALPLPFPAADHLCGECLQRPPAFDLTL 90
Query: 81 SVTLYCDMSCVLVRLLKYHDRTDLAIMM 108
+ Y ++ KY + A +
Sbjct: 91 APLRYQFPVAAMIGRYKYQGQRAYARPL 118
>gi|121639131|ref|YP_979355.1| hypothetical protein BCG_3271c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991624|ref|YP_002646313.1| hypothetical protein JTY_3267 [Mycobacterium bovis BCG str. Tokyo
172]
gi|121494779|emb|CAL73260.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774739|dbj|BAH27545.1| hypothetical protein JTY_3267 [Mycobacterium bovis BCG str. Tokyo
172]
Length = 213
Score = 35.3 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 17/95 (17%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
+ + P C C C +++ H++ D +
Sbjct: 1 MLDLVLPLECGGCGAPATRW---CAACAAELSVAAGEPHVVSPRVD----------PQVP 47
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
R Y + + +K H R DL +A
Sbjct: 48 VFALGR----YAGVRRQAILAMKEHGRRDLVAPLA 78
>gi|167628887|ref|YP_001679386.1| amidophosphoribosyltransferase, putative [Heliobacterium
modesticaldum Ice1]
gi|167591627|gb|ABZ83375.1| amidophosphoribosyltransferase, putative [Heliobacterium
modesticaldum Ice1]
Length = 393
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 18/49 (36%)
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFR 114
++ + ++ Y + + LKY R +A + + M R
Sbjct: 134 CHNCRREAPLFLRAWNIGPYEGILRQSIHDLKYGGRRSIATALGRMMAR 182
>gi|15610378|ref|NP_217759.1| hypothetical protein Rv3242c [Mycobacterium tuberculosis H37Rv]
gi|31794422|ref|NP_856915.1| hypothetical protein Mb3270c [Mycobacterium bovis AF2122/97]
gi|148663105|ref|YP_001284628.1| hypothetical protein MRA_3283 [Mycobacterium tuberculosis H37Ra]
gi|148824444|ref|YP_001289198.1| hypothetical protein TBFG_13271 [Mycobacterium tuberculosis F11]
gi|215405254|ref|ZP_03417435.1| hypothetical protein Mtub0_16486 [Mycobacterium tuberculosis
02_1987]
gi|215413120|ref|ZP_03421821.1| hypothetical protein Mtub9_17201 [Mycobacterium tuberculosis
94_M4241A]
gi|215428723|ref|ZP_03426642.1| hypothetical protein MtubT9_20988 [Mycobacterium tuberculosis T92]
gi|215432206|ref|ZP_03430125.1| hypothetical protein MtubE_16424 [Mycobacterium tuberculosis
EAS054]
gi|215447545|ref|ZP_03434297.1| hypothetical protein MtubT_16945 [Mycobacterium tuberculosis T85]
gi|218755027|ref|ZP_03533823.1| hypothetical protein MtubG1_17059 [Mycobacterium tuberculosis GM
1503]
gi|253800284|ref|YP_003033285.1| hypothetical protein TBMG_03290 [Mycobacterium tuberculosis KZN
1435]
gi|254233855|ref|ZP_04927180.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254365866|ref|ZP_04981911.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|260188290|ref|ZP_05765764.1| hypothetical protein MtubCP_20008 [Mycobacterium tuberculosis
CPHL_A]
gi|260202398|ref|ZP_05769889.1| hypothetical protein MtubT4_20496 [Mycobacterium tuberculosis T46]
gi|260202403|ref|ZP_05769894.1| hypothetical protein MtubT4_20523 [Mycobacterium tuberculosis T46]
gi|260206593|ref|ZP_05774084.1| hypothetical protein MtubK8_20057 [Mycobacterium tuberculosis K85]
gi|289448930|ref|ZP_06438674.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289555520|ref|ZP_06444730.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289571469|ref|ZP_06451696.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289575962|ref|ZP_06456189.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289747060|ref|ZP_06506438.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289751936|ref|ZP_06511314.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289755365|ref|ZP_06514743.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289759382|ref|ZP_06518760.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289763430|ref|ZP_06522808.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294993818|ref|ZP_06799509.1| hypothetical protein Mtub2_04706 [Mycobacterium tuberculosis 210]
gi|297732892|ref|ZP_06962010.1| hypothetical protein MtubKR_17462 [Mycobacterium tuberculosis KZN
R506]
gi|298526718|ref|ZP_07014127.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306777571|ref|ZP_07415908.1| hypothetical protein TMAG_02695 [Mycobacterium tuberculosis
SUMu001]
gi|306786115|ref|ZP_07424437.1| hypothetical protein TMCG_01665 [Mycobacterium tuberculosis
SUMu003]
gi|306795003|ref|ZP_07433305.1| hypothetical protein TMEG_03639 [Mycobacterium tuberculosis
SUMu005]
gi|306805049|ref|ZP_07441717.1| hypothetical protein TMHG_02463 [Mycobacterium tuberculosis
SUMu008]
gi|306969338|ref|ZP_07481999.1| hypothetical protein TMIG_02759 [Mycobacterium tuberculosis
SUMu009]
gi|306973690|ref|ZP_07486351.1| hypothetical protein TMJG_03426 [Mycobacterium tuberculosis
SUMu010]
gi|307081399|ref|ZP_07490569.1| hypothetical protein TMKG_02501 [Mycobacterium tuberculosis
SUMu011]
gi|308370201|ref|ZP_07666889.1| hypothetical protein TMBG_01937 [Mycobacterium tuberculosis
SUMu002]
gi|308372474|ref|ZP_07667386.1| hypothetical protein TMDG_02077 [Mycobacterium tuberculosis
SUMu004]
gi|308374814|ref|ZP_07667868.1| hypothetical protein TMFG_00451 [Mycobacterium tuberculosis
SUMu006]
gi|308376040|ref|ZP_07668172.1| hypothetical protein TMGG_02790 [Mycobacterium tuberculosis
SUMu007]
gi|308406096|ref|ZP_07669505.1| hypothetical protein TMLG_02014 [Mycobacterium tuberculosis
SUMu012]
gi|313660224|ref|ZP_07817104.1| hypothetical protein MtubKV_17462 [Mycobacterium tuberculosis KZN
V2475]
gi|2072709|emb|CAB08343.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|31620018|emb|CAD95362.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|124599384|gb|EAY58488.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|134151379|gb|EBA43424.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148507257|gb|ABQ75066.1| hypothetical protein MRA_3283 [Mycobacterium tuberculosis H37Ra]
gi|148722971|gb|ABR07596.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|253321787|gb|ACT26390.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289421888|gb|EFD19089.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289440152|gb|EFD22645.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289540393|gb|EFD44971.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289545223|gb|EFD48871.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289687588|gb|EFD55076.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289692523|gb|EFD59952.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289695952|gb|EFD63381.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289710936|gb|EFD74952.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|289714946|gb|EFD78958.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298496512|gb|EFI31806.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308214113|gb|EFO73512.1| hypothetical protein TMAG_02695 [Mycobacterium tuberculosis
SUMu001]
gi|308325043|gb|EFP13894.1| hypothetical protein TMBG_01937 [Mycobacterium tuberculosis
SUMu002]
gi|308329265|gb|EFP18116.1| hypothetical protein TMCG_01665 [Mycobacterium tuberculosis
SUMu003]
gi|308333095|gb|EFP21946.1| hypothetical protein TMDG_02077 [Mycobacterium tuberculosis
SUMu004]
gi|308336782|gb|EFP25633.1| hypothetical protein TMEG_03639 [Mycobacterium tuberculosis
SUMu005]
gi|308340616|gb|EFP29467.1| hypothetical protein TMFG_00451 [Mycobacterium tuberculosis
SUMu006]
gi|308344557|gb|EFP33408.1| hypothetical protein TMGG_02790 [Mycobacterium tuberculosis
SUMu007]
gi|308348353|gb|EFP37204.1| hypothetical protein TMHG_02463 [Mycobacterium tuberculosis
SUMu008]
gi|308353190|gb|EFP42041.1| hypothetical protein TMIG_02759 [Mycobacterium tuberculosis
SUMu009]
gi|308356930|gb|EFP45781.1| hypothetical protein TMJG_03426 [Mycobacterium tuberculosis
SUMu010]
gi|308360931|gb|EFP49782.1| hypothetical protein TMKG_02501 [Mycobacterium tuberculosis
SUMu011]
gi|308364471|gb|EFP53322.1| hypothetical protein TMLG_02014 [Mycobacterium tuberculosis
SUMu012]
gi|323718111|gb|EGB27293.1| hypothetical protein TMMG_02390 [Mycobacterium tuberculosis
CDC1551A]
gi|326902530|gb|EGE49463.1| hypothetical protein TBPG_00375 [Mycobacterium tuberculosis W-148]
gi|328460019|gb|AEB05442.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 213
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 17/95 (17%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
+ + P C C C +++ H++ D +
Sbjct: 1 MLDLVLPLECGGCGAPATRW---CAACAAELSVAAGEPHVVSPRVD----------PQVP 47
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
R Y + + +K H R DL +A
Sbjct: 48 VFALGR----YAGVRRQAILAMKEHGRRDLVAPLA 78
>gi|299142045|ref|ZP_07035179.1| competence protein F [Prevotella oris C735]
gi|298576507|gb|EFI48379.1| competence protein F [Prevotella oris C735]
Length = 231
Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 14/116 (12%)
Query: 8 VKSIIIELFHCIYPSICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDP 66
+ S + F I P +C + R+ +C C + T++ L +D
Sbjct: 1 MISFLDRFFDLIAPRLCAVCGSRLTVSEKMICAPCNRHLP---RTDYALSP----LDNPL 53
Query: 67 LKSMQKDLPLTQIRSVTLYCDM--SCVLVRLLKYHDRT----DLAIMMAQWMFRVL 116
+ K +P+ + + Y + + LKYH R L MMA M
Sbjct: 54 CRIFWKQVPIEKAAAWFYYSAKSPASRAIYDLKYHHRAAIGHQLGEMMACEMQANG 109
>gi|28896921|ref|NP_796526.1| ComF-like protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153837883|ref|ZP_01990550.1| competence protein F [Vibrio parahaemolyticus AQ3810]
gi|260365892|ref|ZP_05778386.1| ComF family protein [Vibrio parahaemolyticus K5030]
gi|260895530|ref|ZP_05904026.1| ComF family protein [Vibrio parahaemolyticus Peru-466]
gi|308126565|ref|ZP_05910949.2| ComF family protein [Vibrio parahaemolyticus AQ4037]
gi|28805129|dbj|BAC58410.1| ComF-related protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149748746|gb|EDM59591.1| competence protein F [Vibrio parahaemolyticus AQ3810]
gi|308088554|gb|EFO38249.1| ComF family protein [Vibrio parahaemolyticus Peru-466]
gi|308109597|gb|EFO47137.1| ComF family protein [Vibrio parahaemolyticus AQ4037]
gi|308113432|gb|EFO50972.1| ComF family protein [Vibrio parahaemolyticus K5030]
Length = 241
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 16/115 (13%)
Query: 13 IELFHCIYPSICPIYS---RIINLRFCL--CGHCWSKIHFI---TATEHILKNNKDNIDK 64
+ H + S C + + L C HC+ + + LK + NI+
Sbjct: 7 QNIMHRVLSSQCGLCRFPIQATAQPNALRWCDHCYQYLTPVKRCQRCGLSLKAEEANIES 66
Query: 65 DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
+ + + P ++ ++ Y V+ K H +T W R L ++
Sbjct: 67 ICGECLSEPPPWQRLFTLGDYDFPLSREVQRFKDHGQT--------WHVRALTQL 113
>gi|238028708|ref|YP_002912939.1| phosphoribosyltransferase [Burkholderia glumae BGR1]
gi|237877902|gb|ACR30235.1| Phosphoribosyltransferase [Burkholderia glumae BGR1]
Length = 274
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 19/53 (35%)
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEK 118
+ P ++ Y LV LK+ R L + A+ + R + +
Sbjct: 97 CGACRRAPPPFDATFALADYRPPLASLVLDLKFGARLALGRLFAERLARAVRE 149
>gi|51598916|ref|YP_073104.1| hypothetical protein BG0684 [Borrelia garinii PBi]
gi|51573487|gb|AAU07512.1| hypothetical protein BG0684 [Borrelia garinii PBi]
Length = 118
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 7/70 (10%), Positives = 16/70 (22%), Gaps = 6/70 (8%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKD- 73
+ + C + L +C +C +K+ I +
Sbjct: 1 MARVTFEVFCEQCGEKVGLNRSICPNCAAKLGDIECPNCRHVGPVSAFGEGCPNCHYSPF 60
Query: 74 -----LPLTQ 78
P +
Sbjct: 61 QELKEKPFKR 70
>gi|293391254|ref|ZP_06635588.1| protein GntX [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951788|gb|EFE01907.1| protein GntX [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 228
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 26/84 (30%), Gaps = 6/84 (7%)
Query: 19 IYPSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNID--KDPLKSMQKDLP 75
++ S C + + LC C I + + + ++++
Sbjct: 3 VFQSCCVHCHTPLKLAKHGLCSRC---NRTIRRFAYCGCCGAELAENALHCGNCLRQEPA 59
Query: 76 LTQIRSVTLYCDMSCVLVRLLKYH 99
++ + Y + L+ K+
Sbjct: 60 WDRMVIIGRYNEPLSTLIHRFKFQ 83
>gi|325135072|gb|EGC57700.1| comF/gntX family protein [Neisseria meningitidis M13399]
Length = 241
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRNDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++R LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMVQPLADLMM 111
>gi|254483220|ref|ZP_05096453.1| hypothetical protein GPB2148_406 [marine gamma proteobacterium
HTCC2148]
gi|214036591|gb|EEB77265.1| hypothetical protein GPB2148_406 [marine gamma proteobacterium
HTCC2148]
Length = 240
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 38/106 (35%), Gaps = 6/106 (5%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKD-- 65
V S I L ++P+ C + LC C +++ ++ + +
Sbjct: 2 VNSAIQALGGALFPTRCCLCQWSCAGTLPLCDDCRAEL--VSNQQCCQQCAVPLATGSAV 59
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLK-YHDRTDLAIMMAQ 110
+ + ++ + LY + ++ K + DR L ++A
Sbjct: 60 CGDCLSRPPHYDRVIAPWLYGEYLAYIIGRWKFHGDRA-LTPLLAN 104
>gi|28572301|ref|NP_789081.1| hypothetical protein TW138 [Tropheryma whipplei TW08/27]
gi|28410432|emb|CAD66818.1| conserved hypothetical protein (possible ATP-binding) [Tropheryma
whipplei TW08/27]
Length = 231
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 23/92 (25%), Gaps = 23/92 (25%)
Query: 18 CIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77
YP+ CP LC C++++ D I
Sbjct: 4 LFYPTSCPCCGM---QDTTLCDLCFARLA--ERPYRESLAGLDVI--------------- 43
Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
S Y + + K R LA M
Sbjct: 44 ---SCCDYTPTARAFITAYKVMKRMTLAKFMG 72
>gi|167967994|ref|ZP_02550271.1| hypothetical protein MtubH3_08123 [Mycobacterium tuberculosis
H37Ra]
gi|219559300|ref|ZP_03538376.1| hypothetical protein MtubT1_19152 [Mycobacterium tuberculosis T17]
gi|254552345|ref|ZP_05142792.1| hypothetical protein Mtube_18153 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289444818|ref|ZP_06434562.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289444823|ref|ZP_06434567.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|297635895|ref|ZP_06953675.1| hypothetical protein MtubK4_17307 [Mycobacterium tuberculosis KZN
4207]
gi|289417737|gb|EFD14977.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289417742|gb|EFD14982.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length = 237
Score = 34.9 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 17/95 (17%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
+ + P C C C +++ H++ D +
Sbjct: 25 VLDLVLPLECGGCGAPATRW---CAACAAELSVAAGEPHVVSPRVD----------PQVP 71
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
R Y + + +K H R DL +A
Sbjct: 72 VFALGR----YAGVRRQAILAMKEHGRRDLVAPLA 102
>gi|15842831|ref|NP_337868.1| hypothetical protein MT3340 [Mycobacterium tuberculosis CDC1551]
gi|13883160|gb|AAK47682.1| hypothetical protein MT3340 [Mycobacterium tuberculosis CDC1551]
Length = 241
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 26/95 (27%), Gaps = 17/95 (17%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
+ + P C C C +++ H++ D +
Sbjct: 29 VLDLVLPLECGGCGAPATRW---CAACAAELSVAAGEPHVVSPRVD----------PQVP 75
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMA 109
R Y + + +K H R DL +A
Sbjct: 76 VFALGR----YAGVRRQAILAMKEHGRRDLVAPLA 106
>gi|325128978|gb|EGC51829.1| comF/gntX family protein [Neisseria meningitidis N1568]
Length = 241
Score = 34.5 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKI---HFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
C + + +C C + + A L +K ++
Sbjct: 18 RCVLCHGSSGVSDGICAGCRNDLAAYRTDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRM 77
Query: 80 RSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ Y ++R LK+ + +A M
Sbjct: 78 WASLHYEPPVSNMIRALKHLADLGMVQPLADLMM 111
>gi|330838209|ref|YP_004412789.1| phosphoribosyltransferase [Selenomonas sputigena ATCC 35185]
gi|329745973|gb|AEB99329.1| phosphoribosyltransferase [Selenomonas sputigena ATCC 35185]
Length = 229
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKI 45
+ ++P+ CP R C C S+
Sbjct: 14 VSSVVFPARCPACGAYCERRGGWCAPCLSRT 44
>gi|50123053|ref|YP_052220.1| gluconate periplasmic-binding protein [Pectobacterium atrosepticum
SCRI1043]
gi|49613579|emb|CAG77030.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 233
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 30/75 (40%)
Query: 36 CLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRL 95
+C +C + + + + +Q P + ++ Y L++
Sbjct: 21 GICSYCQRHFPRLPTCCPRCGLPTGDTTRQCGRCLQDPPPWQSMTFISDYAPPFNTLLKH 80
Query: 96 LKYHDRTDLAIMMAQ 110
K+H +T+LA ++A+
Sbjct: 81 FKFHGKTELAAVLAR 95
>gi|293189439|ref|ZP_06608159.1| putative purine/pyrimidine phosphoribosyl transferase [Actinomyces
odontolyticus F0309]
gi|292821529|gb|EFF80468.1| putative purine/pyrimidine phosphoribosyl transferase [Actinomyces
odontolyticus F0309]
Length = 238
Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 25/92 (27%), Gaps = 19/92 (20%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
+ L + P C LC C L+ ++
Sbjct: 1 MRGLVGALLPVQCAGCRAW---DEVLCPSC-------------RSLAGCPAHVASLEGVR 44
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTD 103
LPL ++ Y +V K+ RTD
Sbjct: 45 GPLPLV---AIGDYDGPLRRIVLAAKHSARTD 73
>gi|207727801|ref|YP_002256195.1| competence protein f-related protein [Ralstonia solanacearum MolK2]
gi|206591042|emb|CAQ56654.1| competence protein f-related protein [Ralstonia solanacearum MolK2]
Length = 240
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 32/104 (30%), Gaps = 6/104 (5%)
Query: 16 FHCIYPSICPIYSRIINLRFCLCGHCWSKI-HFITAT---EHILKNNKDNIDKDPLKSMQ 71
F + P C + + +C C + + + + ++ + + +
Sbjct: 14 FRHLLPCACALCGAV--QHDLVCAGCIADLDPLLERRRCRQCARPLDRRHPARHCPACLA 71
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRV 115
+ Y LV LK+ + LA +A+ +
Sbjct: 72 GAPDFDATVVIADYAWPLNHLVTGLKFGAQLPLAAWLAERLADA 115
>gi|304437879|ref|ZP_07397826.1| FHA domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304369101|gb|EFM22779.1| FHA domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 88
Score = 34.5 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
CP + + C HC I I+ ++ D +S P ++ +
Sbjct: 4 CPKCEKFVPSTATACPHC--GIPIISGFSPNYGAG-FSLGDDETESRNDAPP-AKVVNAD 59
Query: 84 LYCDM 88
LY D+
Sbjct: 60 LYDDV 64
>gi|90581402|ref|ZP_01237197.1| hypothetical ComF-related protein [Vibrio angustum S14]
gi|90437379|gb|EAS62575.1| hypothetical ComF-related protein [Vibrio angustum S14]
Length = 235
Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 4/89 (4%)
Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHI-LKNNKDNIDKDPLKSMQKDLPLTQIRS 81
C + + C +C S F + + N ++ + P ++
Sbjct: 22 CSLCQLPLEPNDDYWCHYCLS--QFPSPPYCQRCGTSTLNAEQYCGHCLTTPPPWQRLYR 79
Query: 82 VTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
+ Y L+ K+ LA +A+
Sbjct: 80 LGEYQPPLQQLISQFKFGKNFWLAKPLAK 108
>gi|330954916|gb|EGH55176.1| phosphoribosyltransferase [Pseudomonas syringae Cit 7]
Length = 244
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 23/75 (30%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSVT 83
C + + +C C +++ ++ + ++ Q+ +
Sbjct: 21 CLLCDERSEVPTPICVPCEAELPWLGNACVCCALPLPRSGMSCAQCCKQTPGFAQVIAPW 80
Query: 84 LYCDMSCVLVRLLKY 98
LY L+ K+
Sbjct: 81 LYDFPVDGLITRFKH 95
>gi|317131754|ref|YP_004091068.1| phosphoribosyltransferase [Ethanoligenens harbinense YUAN-3]
gi|315469733|gb|ADU26337.1| phosphoribosyltransferase [Ethanoligenens harbinense YUAN-3]
Length = 225
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 6/48 (12%), Positives = 15/48 (31%)
Query: 10 SIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKN 57
S++ + ++P+ C ++ C C K +
Sbjct: 2 SLLERVAGVLFPARCVFCGAVVPQGTFACPACAGKAPRVEEPVCSGCG 49
>gi|300313450|ref|YP_003777542.1| amidophosphoribosyltransferase [Herbaspirillum seropedicae SmR1]
gi|300076235|gb|ADJ65634.1| amidophosphoribosyltransferase protein [Herbaspirillum seropedicae
SmR1]
Length = 299
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 22/86 (25%), Gaps = 9/86 (10%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATE-----HILKNNKDNIDKDPLKSMQKD 73
+ PS C + R LC C F T + + ++
Sbjct: 66 LLPSACALCGA--EGREILCAPCHK--RFYTRQHRRCIQCAMPMPVTGKELRCGACLKDR 121
Query: 74 LPLTQIRSVTLYCDMSCVLVRLLKYH 99
T Y S L LK+
Sbjct: 122 PAFDATIVATDYFAPSDQLALALKFG 147
>gi|224537616|ref|ZP_03678155.1| hypothetical protein BACCELL_02496 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520758|gb|EEF89863.1| hypothetical protein BACCELL_02496 [Bacteroides cellulosilyticus
DSM 14838]
Length = 184
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 75 PLTQIRSVTLYCDMS--CVLVRLLKYHDRTDLAIMMAQWMF 113
PL + S Y S ++ LKY R +L +M + M
Sbjct: 15 PLERATSYFFYRKGSDFRRILHQLKYGGRKELGAVMGRCMA 55
>gi|92114417|ref|YP_574345.1| hypothetical protein Csal_2296 [Chromohalobacter salexigens DSM
3043]
gi|91797507|gb|ABE59646.1| conserved hypothetical protein [Chromohalobacter salexigens DSM
3043]
Length = 241
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 23/87 (26%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
I + P C C C++ + + ++
Sbjct: 17 IDQAASIALPGQCAFCMGETPAGQAWCDACFAALPWNRVACRRCAEPLARPAALCGHCLR 76
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKY 98
R+ Y D + +L++ K+
Sbjct: 77 AAPAFDVTRAPLRYEDAAQMLLQRFKF 103
>gi|299534094|ref|ZP_07047446.1| hypothetical protein CTS44_24793 [Comamonas testosteroni S44]
gi|298718003|gb|EFI59008.1| hypothetical protein CTS44_24793 [Comamonas testosteroni S44]
Length = 254
Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 8/96 (8%)
Query: 21 PSICPIYSRIINLRFCLCGHC---WSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77
PS C I R R +C C W++ + +++ L
Sbjct: 32 PSQCAICGRWPGPR--ICRDCHARWAQHK--HRCHSCALPLPALVSL-CGNCLKQPPRLK 86
Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + Y L+ K+ L + + M
Sbjct: 87 RCTAALDYAYPWQNLITRYKFQADLGLVRSLGRLMA 122
>gi|326796484|ref|YP_004314304.1| phosphoribosyltransferase [Marinomonas mediterranea MMB-1]
gi|326547248|gb|ADZ92468.1| phosphoribosyltransferase [Marinomonas mediterranea MMB-1]
Length = 243
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 3/78 (3%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + + + LC C ++ P
Sbjct: 22 QCYLCKQPSSS--SLCNWCLPLLN-TNQARCKGCGIAGKFPYLCGDCQSTTRPWKSCIVA 78
Query: 83 TLYCDMSCVLVRLLKYHD 100
T Y ++ L+R K+HD
Sbjct: 79 TDYEKINRHLIRAAKFHD 96
>gi|146313458|ref|YP_001178532.1| gluconate periplasmic binding protein [Enterobacter sp. 638]
gi|145320334|gb|ABP62481.1| putative competence protein [Enterobacter sp. 638]
Length = 227
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 14/85 (16%)
Query: 23 ICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
IC + +R N R C C ++ + +Q+ P + +V
Sbjct: 22 ICSVCTRSFNTRHPCCPQC--------------GLPAMSMKMPCGRCLQQPPPWCALVAV 67
Query: 83 TLYCDMSCVLVRLLKYHDRTDLAIM 107
Y L+ LK+ ++ LA
Sbjct: 68 DDYVQPLSGLIHKLKFTGQSQLAWP 92
>gi|291456486|ref|ZP_06595876.1| putative phosphoribosyl transferase domain protein [Bifidobacterium
breve DSM 20213]
gi|291381763|gb|EFE89281.1| putative phosphoribosyl transferase domain protein [Bifidobacterium
breve DSM 20213]
Length = 224
Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 29/94 (30%)
Query: 17 HCIYPSICPIYSRIINLRFCLCGHC------WSKIHFITATEHILKNNKDNIDKDPLKSM 70
++P C R LCG C W ++ ++ ++
Sbjct: 4 DALFPRGCAGCDRP---DEVLCGDCRSLFANWRNRELVSG-------------QETQGAV 47
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL 104
S + Y + + K HD T+L
Sbjct: 48 HT---W----SASTYQGVVRHAILAWKDHDDTEL 74
>gi|170699784|ref|ZP_02890817.1| phosphoribosyltransferase [Burkholderia ambifaria IOP40-10]
gi|170135311|gb|EDT03606.1| phosphoribosyltransferase [Burkholderia ambifaria IOP40-10]
Length = 270
Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 29/114 (25%), Gaps = 22/114 (19%)
Query: 21 PSICPIYSRIINLRFCLCGHC----WSKIHF---------------ITATEHILKNNKDN 61
P+ C + + +C C W++ A +
Sbjct: 30 PNRCALCGNL--SHAVICSACDAAYWNEARLRCDVCAVPLGIGRPRPRAARGRHTGAAAS 87
Query: 62 IDKDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDL-AIMMAQWMFR 114
P ++ Y L R LK+H R L A A+ R
Sbjct: 88 FAYRCDACRATPPPFDATLALADYRAPLDGLARGLKFHARLALGAEFAARLAQR 141
>gi|264680076|ref|YP_003279985.1| hypothetical protein CtCNB1_3943 [Comamonas testosteroni CNB-2]
gi|262210591|gb|ACY34689.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
Length = 254
Score = 34.5 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 8/96 (8%)
Query: 21 PSICPIYSRIINLRFCLCGHC---WSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLT 77
PS C I R R +C C W++ + +++ L
Sbjct: 32 PSQCAICGRWPGPR--ICRDCHARWAQHK--HRCHSCALPLPALVSL-CGNCLKQPPRLK 86
Query: 78 QIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ + Y L+ K+ L + + M
Sbjct: 87 RCTAALDYAYPWQNLITRYKFQADLGLVRSLGRLMA 122
>gi|163847407|ref|YP_001635451.1| amidophosphoribosyltransferase-like protein [Chloroflexus
aurantiacus J-10-fl]
gi|222525256|ref|YP_002569727.1| amidophosphoribosyltransferase-like protein [Chloroflexus sp.
Y-400-fl]
gi|163668696|gb|ABY35062.1| amidophosphoribosyltransferase-like protein [Chloroflexus
aurantiacus J-10-fl]
gi|222449135|gb|ACM53401.1| amidophosphoribosyltransferase-like protein [Chloroflexus sp.
Y-400-fl]
Length = 218
Score = 34.1 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 23/98 (23%), Gaps = 21/98 (21%)
Query: 4 IIQTVKSIIIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNID 63
+ ++ + + ++P C ++ F C C ++
Sbjct: 1 MYHATPAMFNRVLNWLFPDRCAGCRQLTGDLF--CAACRKRLR---------------PF 43
Query: 64 KDPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR 101
D Y + LKY R
Sbjct: 44 PPFPPPAGLDRAWV----AFRYEGALVSAIHQLKYGRR 77
>gi|227494985|ref|ZP_03925301.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
gi|226831437|gb|EEH63820.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
Length = 240
Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 22/99 (22%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSK-IHFITATEHILKNNKDNIDKDPLKSM 70
+ E ++P+ C + LC C++ I + L
Sbjct: 7 VNEFLDLLFPTQCVVCGEWGQ---GLCLRCFAGSISGLRRFRFALDAGG----------- 52
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDR-TDLAIMM 108
S+ Y L+ K+ DR D +I +
Sbjct: 53 -----FLPGLSLGSYVGDLRSLILSAKH-DRVLDFSIWL 85
>gi|308094559|ref|ZP_05890176.2| ComF family protein [Vibrio parahaemolyticus AN-5034]
gi|308089775|gb|EFO39470.1| ComF family protein [Vibrio parahaemolyticus AN-5034]
Length = 232
Score = 34.1 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 16/105 (15%)
Query: 23 ICPIYS---RIINLRFCL--CGHCWSKIHFI---TATEHILKNNKDNIDKDPLKSMQKDL 74
C + + L C HC+ + + LK + NI+ + + +
Sbjct: 8 QCGLCRFPIQATAQPNALRWCDHCYQYLTPVKRCQRCGLSLKAEEANIESICGECLSEPP 67
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMFRVLEKI 119
P ++ ++ Y V+ K H +T W R L ++
Sbjct: 68 PWQRLFTLGDYDFPLSREVQRFKDHGQT--------WHVRALTQL 104
>gi|303248558|ref|ZP_07334815.1| phosphoribosyltransferase [Desulfovibrio fructosovorans JJ]
gi|302490088|gb|EFL50009.1| phosphoribosyltransferase [Desulfovibrio fructosovorans JJ]
Length = 255
Score = 34.1 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 12/82 (14%)
Query: 22 SICPIYS-RIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
+CP+ + R+ C C L + + + +++
Sbjct: 41 PVCPLCAARLTPRLGGYCPRC-----------GELAADPAAPPQLCPECLRQGRSWDGFA 89
Query: 81 SVTLYCDMSCVLVRLLKYHDRT 102
Y + +V K+H R
Sbjct: 90 FHGPYEGLLRDMVLGFKFHGRL 111
>gi|218889229|ref|YP_002438093.1| putative phosphoribosyl transferase [Pseudomonas aeruginosa
LESB58]
gi|218769452|emb|CAW25212.1| probable phosphoribosyl transferase [Pseudomonas aeruginosa
LESB58]
Length = 241
Score = 34.1 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 6/94 (6%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65
++ + L P C + + + LC C + + + + + +D
Sbjct: 5 LRPLTRWLLP---PPACLLCAARSDQPPRPLCRACAADLPW-SRQQCRRCALPLPLDGQV 60
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ +++ Q + Y L+ K+
Sbjct: 61 CGECLRRPPAYEQAIAPWRYAFPLDSLINRFKHQ 94
>gi|302834455|ref|XP_002948790.1| hypothetical protein VOLCADRAFT_58546 [Volvox carteri f.
nagariensis]
gi|300265981|gb|EFJ50170.1| hypothetical protein VOLCADRAFT_58546 [Volvox carteri f.
nagariensis]
Length = 115
Score = 33.7 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 22 SICPIYSRIINLRFCLCGHCWSKI 45
+ CP R + F C C +
Sbjct: 90 ASCPGCGRHVQPDFAFCPSCGRSL 113
>gi|311896499|dbj|BAJ28907.1| hypothetical protein KSE_30970 [Kitasatospora setae KM-6054]
Length = 528
Score = 33.7 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 13/59 (22%), Gaps = 9/59 (15%)
Query: 22 SICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIR 80
ICP C +C D I+ D + P R
Sbjct: 2 PICPSCGAASPDPAATCANC--------GRPVAAPAIGDVIE-DAGSAAAGPSPWGAGR 51
>gi|146309104|ref|YP_001189569.1| amidophosphoribosyltransferase-like protein [Pseudomonas
mendocina ymp]
gi|145577305|gb|ABP86837.1| amidophosphoribosyltransferase-like protein [Pseudomonas
mendocina ymp]
Length = 246
Score = 33.7 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 8/77 (10%), Positives = 21/77 (27%), Gaps = 1/77 (1%)
Query: 24 CPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQIRSV 82
C + + +C C + + ++ A + K ++ +
Sbjct: 21 CQLCDEASDHAELSICSACQADLPWLGAHCQVCAVPLPAQGMICGACQNKPPSFARVEAP 80
Query: 83 TLYCDMSCVLVRLLKYH 99
Y L+ K+
Sbjct: 81 WRYAFPVDNLITRFKHQ 97
>gi|225568551|ref|ZP_03777576.1| hypothetical protein CLOHYLEM_04628 [Clostridium hylemonae DSM
15053]
gi|225162779|gb|EEG75398.1| hypothetical protein CLOHYLEM_04628 [Clostridium hylemonae DSM
15053]
Length = 235
Score = 33.7 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 30/103 (29%), Gaps = 6/103 (5%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFIT--ATEH--ILKNNKDNIDKDPLKSM 70
+ +P CP + ++ C C + + K + D+
Sbjct: 6 VLKLFWPETCPFCGK-VHREGA-CPACLPAVKRLELKGPRCMQCGKPVRRTEDEYCRDCA 63
Query: 71 QKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWMF 113
+ S+ L+ + KY ++ + A+ M
Sbjct: 64 HTYHHYDRGSSIWLHKPPVSTSIYRFKYQNQRNYGSYYAEKMA 106
>gi|292669322|ref|ZP_06602748.1| NADH dehydrogenase I subunit E [Selenomonas noxia ATCC 43541]
gi|292649163|gb|EFF67135.1| NADH dehydrogenase I subunit E [Selenomonas noxia ATCC 43541]
Length = 95
Score = 33.7 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 16/52 (30%), Gaps = 3/52 (5%)
Query: 24 CPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLP 75
CP + + C +C I I+ + + D +S P
Sbjct: 6 CPKCDKFVPSSATACPNC--GIPIISGFSPNY-GSGFALGGDDTESRNDAPP 54
>gi|307718808|ref|YP_003874340.1| hypothetical protein STHERM_c11220 [Spirochaeta thermophila DSM
6192]
gi|306532533|gb|ADN02067.1| hypothetical protein STHERM_c11220 [Spirochaeta thermophila DSM
6192]
Length = 236
Score = 33.7 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 26/92 (28%), Gaps = 6/92 (6%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCL---CGHCWSKIHFITATEHILKNNK-DNIDKDPL 67
+ + P C + I L C C + + I +
Sbjct: 6 FEAILDLLAPLHCQVCGTFIPRPHPLHPLCPRCLAGLIPILPPRCPRCSQPLPTPASPCP 65
Query: 68 KSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ + + +++ LY L+ K+H
Sbjct: 66 RCI--PPSVDALQAPFLYHHTIPRLLLAYKHH 95
>gi|254243583|ref|ZP_04936905.1| hypothetical protein PA2G_04406 [Pseudomonas aeruginosa 2192]
gi|126196961|gb|EAZ61024.1| hypothetical protein PA2G_04406 [Pseudomonas aeruginosa 2192]
Length = 241
Score = 33.7 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 6/94 (6%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65
++ + L P C + + + LC C + + + + + +D
Sbjct: 5 LRPLTRWLLP---PPACLLCAARSDQPPRPLCRACAADLPW-SRQQCRRCALPLPLDGQV 60
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ +++ Q + Y L+ K+
Sbjct: 61 CGECLRRPPAYEQAIAPWRYAFPLDSLINRFKHQ 94
>gi|193211907|ref|YP_001997860.1| phosphoribosyltransferase [Chlorobaculum parvum NCIB 8327]
gi|193085384|gb|ACF10660.1| phosphoribosyltransferase [Chlorobaculum parvum NCIB 8327]
Length = 262
Score = 33.7 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 33/112 (29%), Gaps = 13/112 (11%)
Query: 7 TVKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDK- 64
T+ + L H ++P +C + + + LC C + + L + I
Sbjct: 25 TLARPLEGLTHLLFPQVCVVCRKTLTAPEQQLCSACLTDFA---PFPNPLAGGQAVIRSV 81
Query: 65 ----DPLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQWM 112
L RS + +KY L + +W+
Sbjct: 82 NSHFGLGAIPSAAWSLYPYRS----NGALHDALHAMKYEGLFPLGRLFGRWL 129
>gi|296168962|ref|ZP_06850631.1| purine/pyrimidine phosphoribosyl transferase [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896431|gb|EFG76084.1| purine/pyrimidine phosphoribosyl transferase [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 108
Score = 33.7 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 24/96 (25%), Gaps = 17/96 (17%)
Query: 15 LFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDL 74
+ + P C C C ++ H++ D +
Sbjct: 1 MLDLVLPLQCGGCGEPSTRW---CAACARELWVAADQPHVVNPRVD----------PRVP 47
Query: 75 PLTQIRSVTLYCDMSCVLVRLLKYHDRTDLAIMMAQ 110
R Y + LK H R DL +A
Sbjct: 48 VFALGR----YAGARRRAILALKEHGRADLVGPLAG 79
>gi|149174134|ref|ZP_01852762.1| Phosphoribosyltransferase [Planctomyces maris DSM 8797]
gi|148847114|gb|EDL61449.1| Phosphoribosyltransferase [Planctomyces maris DSM 8797]
Length = 252
Score = 33.7 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 19/83 (22%), Gaps = 4/83 (4%)
Query: 19 IYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNI----DKDPLKSMQKDL 74
+YP C + CG ++ + + +
Sbjct: 24 LYPPRCSLCGMETVCTGVNCGEQIEELVPVLSRSCQRCGAPVGPHLETSGGCTDCRGEKF 83
Query: 75 PLTQIRSVTLYCDMSCVLVRLLK 97
+ ++ Y + LK
Sbjct: 84 RFARAVALGKYEGALQEFILNLK 106
>gi|188591075|ref|YP_001795675.1| amidophosphoribosyltransferase, comf/gntx family [Cupriavidus
taiwanensis LMG 19424]
gi|170937969|emb|CAP62953.1| putative amidophosphoribosyltransferase, comF/gntX family
[Cupriavidus taiwanensis LMG 19424]
Length = 285
Score = 33.7 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 22/88 (25%), Gaps = 3/88 (3%)
Query: 12 IIELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQ 71
+ + PS C + R +C C + + + +
Sbjct: 56 LSRAREQLLPSACVLCG--TVQRHVVCTPCAADLLRPVRR-CTVCALALGRHRHCPACAA 112
Query: 72 KDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
++ Y LV LK+
Sbjct: 113 SPRAFDHAHTLGDYAAPQDQLVLALKFG 140
>gi|116054218|ref|YP_788662.1| putative phosphoribosyl transferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|296386989|ref|ZP_06876488.1| putative phosphoribosyl transferase [Pseudomonas aeruginosa PAb1]
gi|115589439|gb|ABJ15454.1| putative phosphoribosyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 241
Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 6/94 (6%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65
++ + L P C + + + LC C + + + + + +D
Sbjct: 5 LRPLTRWLLP---PPACLLCAARSDQPPRPLCRACAADLPW-SRQQCRRCALPLPLDGQV 60
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ +++ Q + Y L+ K+
Sbjct: 61 CGECLRRPPAYEQAIAPWRYAFPLDSLINRFKHQ 94
>gi|291619242|ref|YP_003521984.1| GntX [Pantoea ananatis LMG 20103]
gi|291154272|gb|ADD78856.1| GntX [Pantoea ananatis LMG 20103]
gi|327395571|dbj|BAK12993.1| protein GntX [Pantoea ananatis AJ13355]
Length = 233
Score = 33.4 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
P++C + + LC C ++ + + + + + + P +
Sbjct: 12 PALCWLCQLPLRIALHGLCSICLRQLPRLPSLCPCCGLPAASDALPCGRCLLRPPPWQAL 71
Query: 80 RSVTLYCDMSCVLVRLLKY 98
V+ Y V LK+
Sbjct: 72 ICVSHYQPPLSTWVNQLKF 90
>gi|116671255|ref|YP_832188.1| phosphoribosyltransferase [Arthrobacter sp. FB24]
gi|116611364|gb|ABK04088.1| phosphoribosyltransferase [Arthrobacter sp. FB24]
Length = 308
Score = 33.4 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 27/91 (29%), Gaps = 10/91 (10%)
Query: 13 IELFHCIYPSICPIYSRIINLRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQK 72
EL P C + F LCGHC + +T T + + +
Sbjct: 39 RELLALAAPVECVCCG---SEDFSLCGHCERALRLLTRTPFRAEGQAPALMDVNGSVI-- 93
Query: 73 DLPLTQIRSVTLYCDMSCVLVRLL-KYHDRT 102
+ + +Y + V KY R
Sbjct: 94 ----LPVVAAGVYREELAQAVLSFKKYGQRQ 120
>gi|15595686|ref|NP_249180.1| phosphoribosyl transferase [Pseudomonas aeruginosa PAO1]
gi|9946352|gb|AAG03878.1|AE004486_7 probable phosphoribosyl transferase [Pseudomonas aeruginosa PAO1]
Length = 241
Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 6/94 (6%)
Query: 8 VKSIIIELFHCIYPSICPIYSRIINLR-FCLCGHCWSKIHFITATEHILKNNKDNIDKD- 65
++ + L P C + + + LC C + + + + + +D
Sbjct: 5 LRPLTRWLLP---PPACLLCAARSDQPPRPLCRACAADLPW-SRQQCRRCALPLPLDGQV 60
Query: 66 PLKSMQKDLPLTQIRSVTLYCDMSCVLVRLLKYH 99
+ +++ Q + Y L+ K+
Sbjct: 61 CGECLRRPPAYEQAIAPWRYAFPLDSLINRFKHQ 94
>gi|188535340|ref|YP_001909137.1| Predicted amidophosphoribosyltransferase GntX [Erwinia
tasmaniensis Et1/99]
gi|188030382|emb|CAO98273.1| Predicted amidophosphoribosyltransferase GntX [Erwinia
tasmaniensis Et1/99]
Length = 237
Score = 33.4 bits (75), Expect = 10.0, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Query: 21 PSICPIYSRIIN-LRFCLCGHCWSKIHFITATEHILKNNKDNIDKDPLKSMQKDLPLTQI 79
P+ C + + + LC C + +A D + +++ P ++
Sbjct: 15 PAGCWLCAMPLAFAIHGLCNVCLRLLLVRSACCARCGLPSYAAAYDCGRCLRRPPPWQRL 74
Query: 80 RSVTLYCDMSCVLVRLLKY 98
+V+ + LV LK+
Sbjct: 75 IAVSPWQPPLSQLVNRLKF 93
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.148 0.525
Lambda K H
0.267 0.0454 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,407,220,798
Number of Sequences: 14124377
Number of extensions: 94938954
Number of successful extensions: 363846
Number of sequences better than 10.0: 1163
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 646
Number of HSP's that attempted gapping in prelim test: 361937
Number of HSP's gapped (non-prelim): 1435
length of query: 119
length of database: 4,842,793,630
effective HSP length: 86
effective length of query: 33
effective length of database: 3,628,097,208
effective search space: 119727207864
effective search space used: 119727207864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.7 bits)
S2: 76 (33.7 bits)