HHsearch alignment for GI: 254780311 and conserved domain: COG0678
>COG0678 AHP1 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].
Probab=100.00 E-value=0 Score=317.06 Aligned_cols=161 Identities=50% Similarity=0.985 Sum_probs=152.5
Q ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 97671881599995367068840368884023589838974999982288787410010104653112455310110234
Q gi|254780311|r 1 MIRFQIPQVVFHMRVATVLPDGSKAFQWKDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYC 80 (177)
Q Consensus 1 ~~~~~ip~~~~~ikvGd~~Pd~tl~~~~~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~ 80 (177)
T Consensus 4 ~vg~klP~vtf~tr~~~~~~-----~~~~~~ts~~lf~gKkVvlf~lPGAFTPTCS~~hlPgY~~~~d~f~~kGVD~I~c 78 (165)
T COG0678 4 MVGKKLPAVTFKTRVGDETA-----DGWVDVTTDDLFKGKKVVLFSLPGAFTPTCSSSHLPGYLELADEFKAKGVDEIYC 78 (165)
T ss_pred CCCCCCCCEEEEEEECCCCC-----CCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 45880773076776414467-----7762122888528987999948876588766022846788799999749966999
Q ss_pred EECCCCHHHHHHHCCCCCC-EEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCC
Q ss_conf 3035401136652235875-278610367154333200224765434410015999987996999997488777877777
Q gi|254780311|r 81 LSVNDAFVMNAWGKKLEIK-NVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIKDMVVESWFVEEGFSDNCATDP 159 (177)
Q Consensus 81 ~s~~d~~~~~aw~~~~~~~-~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~dG~I~~~~~E~~~~~~~~~d~ 159 (177)
T Consensus 79 VSVND~FVm~AWak~~g~~~~I~fi~Dg~geFTk~~Gm~~d~~~~g~G~RS~RYsmvV~nGvV~~~~iE~------p~~~ 152 (165)
T COG0678 79 VSVNDAFVMNAWAKSQGGEGNIKFIPDGNGEFTKAMGMLVDKSDLGFGVRSWRYSMVVENGVVEKLFIEP------PGDP 152 (165)
T ss_pred EEECCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCEEECCCCCCCEEEEEEEEEEECCEEEEEEECC------CCCC
T ss_conf 9958299887888753888667994179814545337356315677543120477888578689998638------9995
Q ss_pred CCCCCHHHHHHHH
Q ss_conf 3248999999999
Q gi|254780311|r 160 YEISSPENVLKVI 172 (177)
Q Consensus 160 ~~vs~ae~iL~~L 172 (177)
T Consensus 153 ~~vS~a~~mL~~L 165 (165)
T COG0678 153 FTVSSADTMLAQL 165 (165)
T ss_pred EEECCHHHHHHCC
T ss_conf 1004899997509