HHsearch alignment for GI: 254780311 and conserved domain: KOG0541

>KOG0541 consensus.
Probab=100.00  E-value=0  Score=275.66  Aligned_cols=155  Identities=42%  Similarity=0.764  Sum_probs=143.0

Q ss_pred             EEEECCCCCCCCC------CCCCC--CEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             9953670688403------68884--023589838974999982288787410010104653112455310110234303
Q gi|254780311|r   12 HMRVATVLPDGSK------AFQWK--DVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSV   83 (177)
Q Consensus        12 ~ikvGd~~Pd~tl------~~~~~--~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~   83 (177)
T Consensus         8 ~i~vGd~~p~~~is~~~~~~~~~~~~tv~~~~l~~GKKvIifGvPgAFtPtCs~sHvPGyi~~a~elksKGvd~IicvSV   87 (171)
T KOG0541           8 PIAVGDTLPSGTISLFEDEPEQLQGNTVNVSSLFKGKKVILFGVPGAFTPTCSSSHVPGYIEKADELKSKGVDEIICVSV   87 (171)
T ss_pred             CCCCCCCCCCCCCHHHCCCCCCCCCCEEEHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             30246746666310011683101342477678407864999848876488541012836887788887568867999963


Q ss_pred             CCCHHHHHHHCCCCC-CEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf             540113665223587-5278610367154333200224765434410015999987996999997488777877777324
Q gi|254780311|r   84 NDAFVMNAWGKKLEI-KNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIKDMVVESWFVEEGFSDNCATDPYEI  162 (177)
Q Consensus        84 ~d~~~~~aw~~~~~~-~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~dG~I~~~~~E~~~~~~~~~d~~~v  162 (177)
T Consensus        88 nDpFv~~aW~k~~g~~~~V~f~aD~~g~ftk~lgleld~~d~~~g~RS~R~a~vvengkV~~~nvE~~g~~------~t~  161 (171)
T KOG0541          88 NDPFVMKAWAKSLGANDHVKFVADPAGEFTKSLGLELDLSDKLLGVRSRRYALVVENGKVTVVNVEEGGTD------FTV  161 (171)
T ss_pred             CCHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCC------EEE
T ss_conf             86899888875257665589986588753100461454022567401240789983886999994368861------577


Q ss_pred             CCHHHHHHHH
Q ss_conf             8999999999
Q gi|254780311|r  163 SSPENVLKVI  172 (177)
Q Consensus       163 s~ae~iL~~L  172 (177)
T Consensus       162 ssae~il~~l  171 (171)
T KOG0541         162 SSAEDILKQL  171 (171)
T ss_pred             ECHHHHHHCC
T ss_conf             5178784329