HHsearch alignment for GI: 254780311 and conserved domain: TIGR02661

>TIGR02661 MauD methylamine dehydrogenase accessory protein MauD; InterPro: IPR013478 MauD appears critical to proper formation of the small subunit of methylamine dehydrogenase, which has both an unusual tryptophan tryptophylquinone cofactor and multiple disulphide bonds. MauD shares sequence similarity, including a CPxC motif, with a number of thiol:disulphide interchange proteins. In MauD mutants, the small subunit apparently does not form properly and is rapidly degraded .; GO: 0030416 methylamine metabolic process.
Probab=96.97  E-value=0.004  Score=36.87  Aligned_cols=132  Identities=20%  Similarity=0.193  Sum_probs=86.2

Q ss_pred             ECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
Q ss_conf             36706884036888-40235898389749999822887874100101046531124553101102343035401136652
Q gi|254780311|r   15 VATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVMNAWG   93 (177)
Q Consensus        15 vGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~~aw~   93 (177)
T Consensus        48 vG~~aP~F~l~~f~G~~V~iG~~~a~~R~~LLMFTaPsCPvC~K-L~PiIkSia~~---E~~-~Vv~ISDG~~~EHr~FL  122 (189)
T TIGR02661        48 VGDAAPIFNLPDFDGEPVRIGGSIALGRPTLLMFTAPSCPVCDK-LLPIIKSIARA---EEI-DVVLISDGTPEEHRRFL  122 (189)
T ss_pred             CCCCCCEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHH-HHHHHHHHHHH---HCC-CEEEEECCCCHHHHHHH
T ss_conf             45558710576667864561175567775035443888853224-32789888867---253-25897279927999886


Q ss_pred             CCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             23587527861036715433320022476543441001599998799699999748877787777732489999999998
Q gi|254780311|r   94 KKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIKDMVVESWFVEEGFSDNCATDPYEISSPENVLKVIR  173 (177)
Q Consensus        94 ~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~dG~I~~~~~E~~~~~~~~~d~~~vs~ae~iL~~Lk  173 (177)
T Consensus       123 ~~H~L~~~~YVV------SAE~GM~fQV~KiPYG------VLLD~~G~I~AKG----L~NTR-------EHlESLlEa~r  179 (189)
T TIGR02661       123 KDHELGEERYVV------SAEIGMAFQVGKIPYG------VLLDQDGVIRAKG----LTNTR-------EHLESLLEADR  179 (189)
T ss_pred             HCCCCCCEEEEE------EECCCCCCCCCCCCCE------EEECCCCEEEECC----CCCHH-------HHHHHHHHHCC
T ss_conf             428888713788------6202210011225622------5667997477426----76438-------88999886200


Q ss_pred             H
Q ss_conf             6
Q gi|254780311|r  174 E  174 (177)
Q Consensus       174 ~  174 (177)
T Consensus       180 ~  180 (189)
T TIGR02661       180 E  180 (189)
T ss_pred             C
T ss_conf             3