HHsearch alignment for GI: 254780311 and conserved domain: pfam00578
>pfam00578 AhpC-TSA AhpC/TSA family. This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA).
Probab=99.72 E-value=4.1e-17 Score=112.24 Aligned_cols=122 Identities=30% Similarity=0.478 Sum_probs=101.4
Q ss_pred ECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
Q ss_conf 36706884036888-40235898389749999822887874100101046531124553101102343035401136652
Q gi|254780311|r 15 VATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVMNAWG 93 (177)
Q Consensus 15 vGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~~aw~ 93 (177)
T Consensus 1 iG~~aP~f~l~d~~G~~~~l~~-~~gk~~vl~f~~~~wC~~C~~-~~~~l~~~~~~~~~~~~-~vv~is~d~~~~~~~~~ 77 (124)
T pfam00578 1 VGDKAPDFELPDLDGKEVSLSD-YKGKWVVLFFYPKDFTPVCTT-ELPALADLYEEFKKLGV-EVLGVSVDSPESHKKFA 77 (124)
T ss_pred CCCCCCCCEEECCCCCEEEHHH-HCCCEEEEEEECCCCCCCHHH-HHHHHHHHHHHHHCCCC-EEEEECCCCHHHHHHHH
T ss_conf 9789986187989969984999-899919999988999927299-99999874432313587-46678589999999999
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCEEEEE
Q ss_conf 235875278610367154333200224765434410015999987-9969999
Q gi|254780311|r 94 KKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIK-DMVVESW 145 (177)
Q Consensus 94 ~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~-dG~I~~~ 145 (177)
T Consensus 78 ~~~~~~-~~~l~D~~~~~~~~~gv~~~~~~-----~~~P~~~lID~~G~I~yi 124 (124)
T pfam00578 78 EKLGLP-FPLLSDPDGEVARAYGVLNEEAG-----GALRTTFVIDPDGKIRYI 124 (124)
T ss_pred HHHCCC-CEEEEECCCHHHHHCCCCCCCCC-----CEEEEEEEECCCCEEEEC
T ss_conf 985999-47999597499998599846679-----882489999899979879