HHsearch results for GI: 254780311 and protein with PDBid: 1jfu_A
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.27 E-value=3e-11 Score=79.44 Aligned_cols=139 Identities=16% Similarity=0.212 Sum_probs=93.1
Q ss_pred ECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEEC--CCCHHHHH
Q ss_conf 36706884036888-4023589838974999982288787410010104653112455310110234303--54011366
Q gi|254780311|r 15 VATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSV--NDAFVMNA 91 (177)
Q Consensus 15 vGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~--~d~~~~~a 91 (177)
.+-++|||+|.+.+ +.++++| ++||.|||+|+ ..+.|.|..+ .+.....++.+...++.. +.++. +++.....
T Consensus 36 ~~~~~Pdf~l~~~~G~~~~L~d-~~GK~vvl~F~-a~~C~~C~~~-~~~l~~l~~~~~~~~~~v-v~is~d~~~~~~~~~ 111 (186)
T 1jfu_A 36 APLKLPDLAFEDADGKPKKLSD-FRGKTLLVNLW-ATWCVPCRKE-MPALDELQGKLSGPNFEV-VAINIDTRDPEKPKT 111 (186)
T ss_dssp SCCBCCCCEEECTTSCEEEGGG-GTTSEEEEEEE-CTTCHHHHHH-HHHHHHHHHHHCBTTEEE-EEEECCCSCTTHHHH
T ss_pred CCCCCCCEEEECCCCCEECHHH-HCCCEEEEEEE-CCCCCCHHHH-HHHHHHHHHCCCCCCEEE-EECCCCCCCHHHHHH
T ss_conf 8977998487899959971999-69996999998-9968366888-576653210012310002-203434589999999
Q ss_pred HHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEE-CCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 5223587527861036715433320022476543441001599998-799699999748877787777732489999999
Q gi|254780311|r 92 WGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALI-KDMVVESWFVEEGFSDNCATDPYEISSPENVLK 170 (177)
Q Consensus 92 w~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii-~dG~I~~~~~E~~~~~~~~~d~~~vs~ae~iL~ 170 (177)
|.+..+...+..+.|......+.++..... .+..+++|| .+|+|.+.+.- + .+- +.+++++
T Consensus 112 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-------~~~P~~~lID~~G~Iv~~~~G--~--------~~~-~~~e~~~ 173 (186)
T 1jfu_A 112 FLKEANLTRLGYFNDQKAKVFQDLKAIGRA-------LGMPTSVLVDPQGCEIATIAG--P--------AEW-ASEDALK 173 (186)
T ss_dssp HHHHTTCCTTCCEECTTCHHHHHHHTTTCC-------SSSSEEEEECTTSBEEEEEES--C--------CCT-TSHHHHH
T ss_pred HHHHHCCCCCEEEECCCCHHHHHHHHHCCC-------CCCCEEEEECCCCEEEEEEEC--C--------CCC-CHHHHHH
T ss_conf 999819987537667632799999876576-------745779999899989999979--8--------999-8699999
Q ss_pred HHHHH
Q ss_conf 99861
Q gi|254780311|r 171 VIRES 175 (177)
Q Consensus 171 ~Lk~~ 175 (177)
.|++.
T Consensus 174 ~i~~l 178 (186)
T 1jfu_A 174 LIRAA 178 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99997