HHsearch results for GI: 254780311 and protein with PDBid: 1nm3_A
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=100.00 E-value=0 Score=306.52 Aligned_cols=163 Identities=41% Similarity=0.796 Sum_probs=151.0
Q ss_pred EEEEECCCCCCCCCCC----CCCCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 9995367068840368----884023589838974999982288787410010104653112455310110234303540
Q gi|254780311|r 11 FHMRVATVLPDGSKAF----QWKDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDA 86 (177)
Q Consensus 11 ~~ikvGd~~Pd~tl~~----~~~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~ 86 (177)
|++..||++|||||.. +..+++++|+|+|||||||||||||||+||.+|||+|+++++.++.+++++|+|+++||+
T Consensus 1 m~~~eGd~~Pd~tl~~~~~~~~~~vsl~d~f~~K~vvL~f~PgAFTp~Ct~~~~~~~~~~~~~~~~~g~~~v~~~s~~D~ 80 (241)
T 1nm3_A 1 MSSMEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDT 80 (241)
T ss_dssp --CCTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCH
T ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCH
T ss_conf 98345878897699977599855853899849983999983688896567661554777668888527861899962998
Q ss_pred HHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCHH
Q ss_conf 11366522358752786103671543332002247654344100159999879969999974887778777773248999
Q gi|254780311|r 87 FVMNAWGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIKDMVVESWFVEEGFSDNCATDPYEISSPE 166 (177)
Q Consensus 87 ~~~~aw~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~dG~I~~~~~E~~~~~~~~~d~~~vs~ae 166 (177)
+++++|++..+...+++++|+++++++++|+..+....|||.||+||+|||+||+|+++|+|++. ..++|++|+||
T Consensus 81 ~v~~aw~~~~~~~~~~llsD~~~~~~~~~g~~~~~~~~g~g~rs~R~a~iIddG~I~~~~ve~~~----~g~~~~~s~~~ 156 (241)
T 1nm3_A 81 FVMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNE----PGDPFKVSDAD 156 (241)
T ss_dssp HHHHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEEETTEEEEEEECCSC----SSCCCSSSSHH
T ss_pred HHHHHHHHHCCCCCEEEECCCCCHHHHHCCCEECCCCCCCCCCCEEEEEEEECCEEEEEEECCCC----CCCCCCCCCHH
T ss_conf 99999999758983666048861788856876656447686420699999999999999976689----99975224689
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999986169
Q gi|254780311|r 167 NVLKVIRESKK 177 (177)
Q Consensus 167 ~iL~~Lk~~~~ 177 (177)
+||++|+++++
T Consensus 157 ~~l~~l~~~~~ 167 (241)
T 1nm3_A 157 TMLKYLAPQHQ 167 (241)
T ss_dssp HHHHHHCTTSC
T ss_pred HHHHHHHHCCC
T ss_conf 99986413247