HHsearch results for GI: 254780311 and protein with PDBid: 1psq_A
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.90 E-value=2.4e-23 Score=144.62 Aligned_cols=145 Identities=19% Similarity=0.213 Sum_probs=114.0
Q ss_pred EEEECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
Q ss_conf 99536706884036888-40235898389749999822887874100101046531124553101102343035401136
Q gi|254780311|r 12 HMRVATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVMN 90 (177)
Q Consensus 12 ~ikvGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~~ 90 (177)
.++||+.||+|+|.+.+ +.++++| |+||++||+|+|++++|+|+.+. +.+...+..+. + ..++++|.+++..+.
T Consensus 15 ~l~vG~~aP~F~l~~~dg~~vsL~d-~~Gk~~Vl~f~~~~~cp~C~~e~-~~l~~~~~~~~--~-~~~v~Vs~d~~~~~~ 89 (163)
T 1psq_A 15 QLQVGDKALDFSLTTTDLSKKSLAD-FDGKKKVLSVVPSIDTGICSTQT-RRFNEELAGLD--N-TVVLTVSMDLPFAQK 89 (163)
T ss_dssp CCCTTSBCCCCEEECTTSCEEEGGG-GTTSEEEEEECSCTTSHHHHHHH-HHHHHHTTTCT--T-EEEEEEESSCHHHHH
T ss_pred CCCCCCCCCCEEEECCCCCEEEHHH-HCCCEEEEEEEECCCCCCCCHHH-HHHHHHHHHHC--C-EEEEEEEECCHHHHH
T ss_conf 8889899987499899999985899-09987999983377576033329-99999987416--5-159999808189999
Q ss_pred HHHCCCCCCEEEEEEC-CCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCCCCCHHHH
Q ss_conf 6522358752786103-67154333200224765434410015999987-996999997488777877777324899999
Q gi|254780311|r 91 AWGKKLEIKNVKLLPD-GSGEFTRKMGMLVYKDNVGFGLRSWRYGALIK-DMVVESWFVEEGFSDNCATDPYEISSPENV 168 (177)
Q Consensus 91 aw~~~~~~~~~~~l~D-~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~~vs~ae~i 168 (177)
+|....+.....+++| ....+.++||+..+.. ++ ..|.++||| ||+|+|.++..++.+ ..+++++
T Consensus 90 ~~~~~~~~~~~~~l~d~~~~~~~~~yg~~~~~~--~~---~~Rs~fvID~~G~I~y~~~~~~~~~--------~~~~~~v 156 (163)
T 1psq_A 90 RWCGAEGLDNAIMLSDYFDHSFGRDYALLINEW--HL---LARAVFVLDTDNTIRYVEYVDNINS--------EPNFEAA 156 (163)
T ss_dssp HHHHHHTCTTSEEEECTTTCHHHHHHTCBCTTT--CS---BCCEEEEECTTCBEEEEEECSBTTS--------CCCHHHH
T ss_pred HHHHHCCCCCCEEEECCCCHHHHHHHHEECCCC--CC---EEEEEEEECCCCEEEEEEECCCCCC--------CCCHHHH
T ss_conf 999972996626653022268998742001568--80---3679999999998999997489888--------8999999
Q ss_pred HHHHHH
Q ss_conf 999986
Q gi|254780311|r 169 LKVIRE 174 (177)
Q Consensus 169 L~~Lk~ 174 (177)
|+.|++
T Consensus 157 l~~lk~ 162 (163)
T 1psq_A 157 IAAAKA 162 (163)
T ss_dssp HHHHHH
T ss_pred HHHHHC
T ss_conf 999965