HHsearch results for GI: 254780311 and protein with PDBid: 1q98_A

Probab=99.93  E-value=6.3e-26  Score=158.51  Aligned_cols=145  Identities=20%  Similarity=0.205  Sum_probs=114.6

Q ss_pred             EEECCCCCCCCCCCC-CCCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHH
Q ss_conf             953670688403688-8402358983897499998228878741001010465311245531011023430354011366
Q gi|254780311|r   13 MRVATVLPDGSKAFQ-WKDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVMNA   91 (177)
Q Consensus        13 ikvGd~~Pd~tl~~~-~~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~~a   91 (177)
                      ++|||.||||+|.+. .+.++++| |+||+|||+|||++|||+|+.|. +.+...++.++  + ..++++|+|+++.+++
T Consensus        17 ~~vG~~aPdF~L~~~~g~~vsLsd-~~Gk~vVl~f~p~~~tp~C~~e~-~~l~~~~~~~~--~-~~v~~IS~d~~~~~~~   91 (165)
T 1q98_A           17 PQVGEIVENFILVGNDLADVALND-FASKRKVLNIFPSIDTGVCATSV-RKFNQQAAKLS--N-TIVLCISADLPFAQAR   91 (165)
T ss_dssp             CCTTCBCCCCEEECTTSCEEEGGG-GTTSEEEEEECSCSCSSCCCHHH-HHHHHHHHHST--T-EEEEEEESSCHHHHTT
T ss_pred             CCCCCCCCCEEEECCCCCEEEHHH-HCCCEEEEEECCCCCCCCCCHHH-HHHHHHHHHHC--C-CEEEEEECCCHHHHHH
T ss_conf             889699987087889999984189-89987999977646767545668-98999999853--9-8799981786899999


Q ss_pred             HHCCCCCCEEEEEECC-CHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             5223587527861036-7154333200224765434410015999987-9969999974887778777773248999999
Q gi|254780311|r   92 WGKKLEIKNVKLLPDG-SGEFTRKMGMLVYKDNVGFGLRSWRYGALIK-DMVVESWFVEEGFSDNCATDPYEISSPENVL  169 (177)
Q Consensus        92 w~~~~~~~~~~~l~D~-~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~~vs~ae~iL  169 (177)
                      |.+..+.....+++|. ...+++.+|+...... ..| .+.|.++||| ||+|+|.|+.....+        ..++|++|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~g-~~~r~~fvID~~G~I~y~~~~~~~~~--------~pd~d~vl  161 (165)
T 1q98_A           92 FCGAEGIENAKTVSTFRNHALHSQLGVDIQTGP-LAG-LTSRAVIVLDEQNNVLHSQLVEEIKE--------EPNYEAAL  161 (165)
T ss_dssp             CTTTTTCTTEEEEECTTCTHHHHHTTCEECSST-TTT-SBCCEEEEECTTSBEEEEEECSBTTS--------CCCHHHHH
T ss_pred             HHHHHCCCCCEECCCCCCCHHHHHHCEECCCCC-CCC-EEEEEEEEECCCCEEEEEEECCCCCC--------CCCHHHHH
T ss_conf             999709876277155445569996173413564-267-16778999989998999998788788--------99999999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780311|r  170 KVI  172 (177)
Q Consensus       170 ~~L  172 (177)
                      +.|
T Consensus       162 ~~L  164 (165)
T 1q98_A          162 AVL  164 (165)
T ss_dssp             HTT
T ss_pred             HHH
T ss_conf             965