HHsearch results for GI: 254780311 and protein with PDBid: 2cvb_A
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus HB8} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.14 E-value=2.3e-10 Score=74.69 Aligned_cols=146 Identities=10% Similarity=0.060 Sum_probs=89.5
Q ss_pred EEEECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCC----
Q ss_conf 99536706884036888-4023589838974999982288787410010104653112455310110234303540----
Q gi|254780311|r 12 HMRVATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDA---- 86 (177)
Q Consensus 12 ~ikvGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~---- 86 (177)
.++||+++|||+|.+.+ +.++++| ++||.|||.|. +..=|.|-. ..|...+..+.++.+ + .++.+.++|+
T Consensus 6 ~l~vG~~aPdF~L~d~~G~~~~Lsd-~~gk~vvl~Fw-atwCp~c~~-~~p~l~~l~~~y~~~-v-~~v~v~s~d~~~~~ 80 (188)
T 2cvb_A 6 ELPLESPLIDAELPDPRGGRYRLSQ-FHEPLLAVVFM-CNHCPYVKG-SIGELVALAERYRGK-V-AFVGINANDYEKYP 80 (188)
T ss_dssp CCCTTCBCCCCEEECTTSCEEEGGG-CCSSEEEEEEE-CSSCHHHHT-THHHHHHHHHHTTTT-E-EEEEEECCCTTTCG
T ss_pred CCCCCCCCCCEEEECCCCCEEEHHH-HCCCEEEEEEE-CCCCCCHHH-HHHHCCCHHHHCCCE-E-EEEEECCCCCCCCC
T ss_conf 8898993776085669999987899-69995999998-989974278-764122001110430-4-77653035522222
Q ss_pred ----HHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCC
Q ss_conf ----1136652235875278610367154333200224765434410015999987-99699999748877787777732
Q gi|254780311|r 87 ----FVMNAWGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIK-DMVVESWFVEEGFSDNCATDPYE 161 (177)
Q Consensus 87 ----~~~~aw~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~~ 161 (177)
-.+..+.+..+ ..+..+.|..++++++++... .-.++|++ +|+|.|...-++... ...+.+
T Consensus 81 ~~~~e~~~~~~~~~~-~~~p~l~D~~~~~~~~~~v~~-----------~P~~~liD~~G~I~y~G~idd~~~--~~~~~~ 146 (188)
T 2cvb_A 81 EDAPEKMAAFAEEHG-IFFPYLLDETQEVAKAYRALR-----------TPEVFLFDERRLLRYHGRVNDNPK--DPSKVQ 146 (188)
T ss_dssp GGSHHHHHHHHHHHT-CCSCEEECSSSHHHHHTTCCE-----------ESEEEEECTTCBEEEEECSSSCTT--CGGGCC
T ss_pred CCCHHHHHHHHHHHC-CCCEEEECCCCCHHHHCCCCE-----------EEEEEEECCCCEEEEEEEECCCCC--CCCCCC
T ss_conf 114888999999829-874047737765111036544-----------778999889986999636437887--888788
Q ss_pred CCCHHHHHHHHHHHC
Q ss_conf 489999999998616
Q gi|254780311|r 162 ISSPENVLKVIRESK 176 (177)
Q Consensus 162 vs~ae~iL~~Lk~~~ 176 (177)
....++.|+.|-+.+
T Consensus 147 ~~~L~~Ai~~ll~g~ 161 (188)
T 2cvb_A 147 SHDLEAAIEALLRGE 161 (188)
T ss_dssp CCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCC
T ss_conf 899999999998389