HHsearch results for GI: 254780311 and protein with PDBid: 2cvb_A

>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus HB8} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.14  E-value=2.3e-10  Score=74.69  Aligned_cols=146  Identities=10%  Similarity=0.060  Sum_probs=89.5

Q ss_pred             EEEECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCC----
Q ss_conf             99536706884036888-4023589838974999982288787410010104653112455310110234303540----
Q gi|254780311|r   12 HMRVATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDA----   86 (177)
Q Consensus        12 ~ikvGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~----   86 (177)
                      .++||+++|||+|.+.+ +.++++| ++||.|||.|. +..=|.|-. ..|...+..+.++.+ + .++.+.++|+    
T Consensus         6 ~l~vG~~aPdF~L~d~~G~~~~Lsd-~~gk~vvl~Fw-atwCp~c~~-~~p~l~~l~~~y~~~-v-~~v~v~s~d~~~~~   80 (188)
T 2cvb_A            6 ELPLESPLIDAELPDPRGGRYRLSQ-FHEPLLAVVFM-CNHCPYVKG-SIGELVALAERYRGK-V-AFVGINANDYEKYP   80 (188)
T ss_dssp             CCCTTCBCCCCEEECTTSCEEEGGG-CCSSEEEEEEE-CSSCHHHHT-THHHHHHHHHHTTTT-E-EEEEEECCCTTTCG
T ss_pred             CCCCCCCCCCEEEECCCCCEEEHHH-HCCCEEEEEEE-CCCCCCHHH-HHHHCCCHHHHCCCE-E-EEEEECCCCCCCCC
T ss_conf             8898993776085669999987899-69995999998-989974278-764122001110430-4-77653035522222


Q ss_pred             ----HHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCC
Q ss_conf             ----1136652235875278610367154333200224765434410015999987-99699999748877787777732
Q gi|254780311|r   87 ----FVMNAWGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIK-DMVVESWFVEEGFSDNCATDPYE  161 (177)
Q Consensus        87 ----~~~~aw~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~~  161 (177)
                          -.+..+.+..+ ..+..+.|..++++++++...           .-.++|++ +|+|.|...-++...  ...+.+
T Consensus        81 ~~~~e~~~~~~~~~~-~~~p~l~D~~~~~~~~~~v~~-----------~P~~~liD~~G~I~y~G~idd~~~--~~~~~~  146 (188)
T 2cvb_A           81 EDAPEKMAAFAEEHG-IFFPYLLDETQEVAKAYRALR-----------TPEVFLFDERRLLRYHGRVNDNPK--DPSKVQ  146 (188)
T ss_dssp             GGSHHHHHHHHHHHT-CCSCEEECSSSHHHHHTTCCE-----------ESEEEEECTTCBEEEEECSSSCTT--CGGGCC
T ss_pred             CCCHHHHHHHHHHHC-CCCEEEECCCCCHHHHCCCCE-----------EEEEEEECCCCEEEEEEEECCCCC--CCCCCC
T ss_conf             114888999999829-874047737765111036544-----------778999889986999636437887--888788


Q ss_pred             CCCHHHHHHHHHHHC
Q ss_conf             489999999998616
Q gi|254780311|r  162 ISSPENVLKVIRESK  176 (177)
Q Consensus       162 vs~ae~iL~~Lk~~~  176 (177)
                      ....++.|+.|-+.+
T Consensus       147 ~~~L~~Ai~~ll~g~  161 (188)
T 2cvb_A          147 SHDLEAAIEALLRGE  161 (188)
T ss_dssp             CCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHCCC
T ss_conf             899999999998389