HHsearch results for GI: 254780311 and protein with PDBid: 2h30_A
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.41 E-value=1.8e-06 Score=53.77 Aligned_cols=131 Identities=15% Similarity=0.183 Sum_probs=82.8
Q ss_pred CCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECC-----CCHHHHHHH
Q ss_conf 884036888-40235898389749999822887874100101046531124553101102343035-----401136652
Q gi|254780311|r 20 PDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVN-----DAFVMNAWG 93 (177)
Q Consensus 20 Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~-----d~~~~~aw~ 93 (177)
+.+++.+.+ +.+++.+ ++||.|||.|+ +-+-|.|-.+ +|...+.++..+..++..+.+.... +......|.
T Consensus 19 ~~~~l~~~d~~~~~l~~-~kgK~vvl~Fw-a~wC~~C~~e-~p~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~ 95 (164)
T 2h30_A 19 TMSTMKTADNRPASVYL-KKDKPTLIKFW-ASWCPLCLSE-LGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWY 95 (164)
T ss_dssp HHTTCEETTSSBGGGGC-CTTSCEEEEEC-CTTCHHHHHH-HHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHH
T ss_pred CCCEEECCCCCEEEHHH-HCCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHH
T ss_conf 76567989999964888-09887999999-8989869999-999999998743540589998652144214578888776
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 23587527861036715433320022476543441001599998799699999748877787777732489999999998
Q gi|254780311|r 94 KKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIKDMVVESWFVEEGFSDNCATDPYEISSPENVLKVIR 173 (177)
Q Consensus 94 ~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~dG~I~~~~~E~~~~~~~~~d~~~vs~ae~iL~~Lk 173 (177)
...+...++++.|..++....||... .- ++++|..+|+|++.+.-. -+.+.+.+.|+
T Consensus 96 ~~~~~~~~p~~~D~~~~l~~~~gi~~------~P----~~~lid~~G~I~~~~~G~-------------~~~~~i~~~l~ 152 (164)
T 2h30_A 96 AGLNYPKLPVVTDNGGTIAQNLNISV------YP----SWALIGKDGDVQRIVKGS-------------INEAQALALIR 152 (164)
T ss_dssp TTSCCTTSCEEECTTCHHHHHTTCCS------SS----EEEEECTTSCEEEEEESC-------------CCHHHHHHHHH
T ss_pred HHHCCCCCCEECCCHHHHHHHCCCCC------CC----EEEEECCCCEEEEEEECC-------------CCHHHHHHHHH
T ss_conf 65025554142063367999849980------38----899997999799999689-------------99999999999
Q ss_pred HHC
Q ss_conf 616
Q gi|254780311|r 174 ESK 176 (177)
Q Consensus 174 ~~~ 176 (177)
+.+
T Consensus 153 ~~~ 155 (164)
T 2h30_A 153 NPN 155 (164)
T ss_dssp CTT
T ss_pred HHH
T ss_conf 999