HHsearch results for GI: 254780311 and protein with PDBid: 2h30_A

>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.41  E-value=1.8e-06  Score=53.77  Aligned_cols=131  Identities=15%  Similarity=0.183  Sum_probs=82.8

Q ss_pred             CCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECC-----CCHHHHHHH
Q ss_conf             884036888-40235898389749999822887874100101046531124553101102343035-----401136652
Q gi|254780311|r   20 PDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVN-----DAFVMNAWG   93 (177)
Q Consensus        20 Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~-----d~~~~~aw~   93 (177)
                      +.+++.+.+ +.+++.+ ++||.|||.|+ +-+-|.|-.+ +|...+.++..+..++..+.+....     +......|.
T Consensus        19 ~~~~l~~~d~~~~~l~~-~kgK~vvl~Fw-a~wC~~C~~e-~p~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~   95 (164)
T 2h30_A           19 TMSTMKTADNRPASVYL-KKDKPTLIKFW-ASWCPLCLSE-LGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWY   95 (164)
T ss_dssp             HHTTCEETTSSBGGGGC-CTTSCEEEEEC-CTTCHHHHHH-HHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHH
T ss_pred             CCCEEECCCCCEEEHHH-HCCCEEEEEEE-CCCCHHHHHH-HHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHH
T ss_conf             76567989999964888-09887999999-8989869999-999999998743540589998652144214578888776


Q ss_pred             CCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             23587527861036715433320022476543441001599998799699999748877787777732489999999998
Q gi|254780311|r   94 KKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIKDMVVESWFVEEGFSDNCATDPYEISSPENVLKVIR  173 (177)
Q Consensus        94 ~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~dG~I~~~~~E~~~~~~~~~d~~~vs~ae~iL~~Lk  173 (177)
                      ...+...++++.|..++....||...      .-    ++++|..+|+|++.+.-.             -+.+.+.+.|+
T Consensus        96 ~~~~~~~~p~~~D~~~~l~~~~gi~~------~P----~~~lid~~G~I~~~~~G~-------------~~~~~i~~~l~  152 (164)
T 2h30_A           96 AGLNYPKLPVVTDNGGTIAQNLNISV------YP----SWALIGKDGDVQRIVKGS-------------INEAQALALIR  152 (164)
T ss_dssp             TTSCCTTSCEEECTTCHHHHHTTCCS------SS----EEEEECTTSCEEEEEESC-------------CCHHHHHHHHH
T ss_pred             HHHCCCCCCEECCCHHHHHHHCCCCC------CC----EEEEECCCCEEEEEEECC-------------CCHHHHHHHHH
T ss_conf             65025554142063367999849980------38----899997999799999689-------------99999999999


Q ss_pred             HHC
Q ss_conf             616
Q gi|254780311|r  174 ESK  176 (177)
Q Consensus       174 ~~~  176 (177)
                      +.+
T Consensus       153 ~~~  155 (164)
T 2h30_A          153 NPN  155 (164)
T ss_dssp             CTT
T ss_pred             HHH
T ss_conf             999