HHsearch results for GI: 254780311 and protein with PDBid: 2pn8_A
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.8e-28 Score=171.22 Aligned_cols=144 Identities=19% Similarity=0.300 Sum_probs=117.0
Q ss_pred CCCCCCCCCC---CC-CCCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHH
Q ss_conf 6706884036---88-8402358983897499998228878741001010465311245531011023430354011366
Q gi|254780311|r 16 ATVLPDGSKA---FQ-WKDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVMNA 91 (177)
Q Consensus 16 Gd~~Pd~tl~---~~-~~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~~a 91 (177)
+.+||||++. ++ .++++++|+ +||+|||+|||++|||+|+.|.+ .+.+.++++++.++ .++++|+++++.+.+
T Consensus 22 ~~PAPdF~~~a~~d~~~~~vsLsd~-kGK~vVL~FyP~~fTpvCt~E~~-~f~~~~~ef~~~g~-~VigIS~Ds~~sh~a 98 (211)
T 2pn8_A 22 SMPAPYWEGTAVIDGEFKELKLTDY-RGKYLVFFFYPLDFTFVCPTEII-AFGDRLEEFRSINT-EVVACSVDSQFTHLA 98 (211)
T ss_dssp SCBCCCCEEEEEETTEEEEEEGGGG-TTSEEEEEECSCTTSSHHHHHHH-HHHHTHHHHHTTTE-EEEEEESSCHHHHHH
T ss_pred CCCCCCCCCCEEECCCCCEEEHHHH-CCCEEEEEEECCCCCCCCHHHHH-HHHHHHHHHHCCCC-EEEEECCCCHHHHHH
T ss_conf 8989998520048899868867996-89939999976665985879999-99876998604896-676002566887999
Q ss_pred HHCCCC------CCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 522358------75278610367154333200224765434410015999987-99699999748877787777732489
Q gi|254780311|r 92 WGKKLE------IKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALIK-DMVVESWFVEEGFSDNCATDPYEISS 164 (177)
Q Consensus 92 w~~~~~------~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~~vs~ 164 (177)
|.+... ...+++++|..++++++||+..... | .+.|.++||| +|+|+++++.+-... .+
T Consensus 99 w~~~~~~~~~~~~l~fpllsD~~~~v~k~yGv~~~~~--g---~~~R~tFiID~~G~Ir~v~~~~~~~g---------r~ 164 (211)
T 2pn8_A 99 WINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDS--G---HTLRGLFIIDDKGILRQITLNDLPVG---------RS 164 (211)
T ss_dssp HHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTT--T---EECEEEEEECTTSBEEEEEEECTTBC---------CC
T ss_pred HHHHHHHHCCCCCCCCCEEECCCCCHHHHCCCCCCCC--C---CEEEEEEEECCCCEEEEEEECCCCCC---------CC
T ss_conf 9976886278567664632157653698849822457--9---61568999899997999998489878---------69
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999998616
Q gi|254780311|r 165 PENVLKVIRESK 176 (177)
Q Consensus 165 ae~iL~~Lk~~~ 176 (177)
++++|+.|++.|
T Consensus 165 ~~EvLr~l~aLq 176 (211)
T 2pn8_A 165 VDETLRLVQAFQ 176 (211)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999865