HHsearch results for GI: 254780311 and protein with PDBid: 3gkn_A

>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreductase; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.92  E-value=4.8e-25  Score=153.76  Aligned_cols=153  Identities=15%  Similarity=0.192  Sum_probs=121.8

Q ss_pred             EEEEECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHH
Q ss_conf             999536706884036888-4023589838974999982288787410010104653112455310110234303540113
Q gi|254780311|r   11 FHMRVATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVM   89 (177)
Q Consensus        11 ~~ikvGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~   89 (177)
                      +.+++|..+|||+|.+.+ +.++|+| |+||||||+|||++|||+|+.+ ++.+.+.++.++..|. .+++++++++..+
T Consensus         7 ~~l~~~a~~~~~~l~~~~G~~~sL~d-~~Gk~vVl~F~p~~~~p~C~~e-~~~l~~~~~~~~~~g~-~vi~is~d~~~~~   83 (163)
T 3gkn_A            7 AVLELPAATFDLPLSLSGGTQTTLRA-HAGHWLVIYFYPKDSTPGATTE-GLDFNALLPEFDKAGA-KILGVSRDSVKSH   83 (163)
T ss_dssp             CCCCCCGGGGGCCEECSTTCEECSGG-GTTSCEEEEECSCTTSHHHHHH-HHHHHHHHHHHHHTTC-EEEEEESSCHHHH
T ss_pred             HHCCCCCCCCCEEEECCCCCEEEHHH-HCCCEEEEEEECCCCCCCCHHH-HHHHHHHHHHHHCCCE-EEEECCCCCHHHH
T ss_conf             34058999984473759999996189-8989699999667779862899-9999865565404772-8974036578999


Q ss_pred             HHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCC-EEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCCCCCHHH
Q ss_conf             66522358752786103671543332002247654344-10015999987-99699999748877787777732489999
Q gi|254780311|r   90 NAWGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFG-LRSWRYGALIK-DMVVESWFVEEGFSDNCATDPYEISSPEN  167 (177)
Q Consensus        90 ~aw~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g-~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~~vs~ae~  167 (177)
                      ..|....+. .+++++|..+++.+.+|+.......+.. ....|.++||+ ||+|++.|....+          ..++|+
T Consensus        84 ~~~~~~~~~-~~~~l~d~~~~~~~~~gv~~~~~~~~~~~~~~~~~tflID~~G~I~~~~~~~~~----------~~~~~~  152 (163)
T 3gkn_A           84 DNFCAKQGF-AFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKV----------AGHADA  152 (163)
T ss_dssp             HHHHHHHCC-SSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCS----------TTHHHH
T ss_pred             HHHHHHCCC-CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCC----------CCCHHH
T ss_conf             999997298-866434832789997194003554675345556389999189989999819997----------869999


Q ss_pred             HHHHHHHHCC
Q ss_conf             9999986169
Q gi|254780311|r  168 VLKVIRESKK  177 (177)
Q Consensus       168 iL~~Lk~~~~  177 (177)
                      ||+.|++.+|
T Consensus       153 iL~~lka~~k  162 (163)
T 3gkn_A          153 VLAALKAHAK  162 (163)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHHCC
T ss_conf             9999997535