HHsearch results for GI: 254780311 and protein with PDBid: 3gkn_A
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreductase; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.92 E-value=4.8e-25 Score=153.76 Aligned_cols=153 Identities=15% Similarity=0.192 Sum_probs=121.8
Q ss_pred EEEEECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHH
Q ss_conf 999536706884036888-4023589838974999982288787410010104653112455310110234303540113
Q gi|254780311|r 11 FHMRVATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVM 89 (177)
Q Consensus 11 ~~ikvGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~ 89 (177)
+.+++|..+|||+|.+.+ +.++|+| |+||||||+|||++|||+|+.+ ++.+.+.++.++..|. .+++++++++..+
T Consensus 7 ~~l~~~a~~~~~~l~~~~G~~~sL~d-~~Gk~vVl~F~p~~~~p~C~~e-~~~l~~~~~~~~~~g~-~vi~is~d~~~~~ 83 (163)
T 3gkn_A 7 AVLELPAATFDLPLSLSGGTQTTLRA-HAGHWLVIYFYPKDSTPGATTE-GLDFNALLPEFDKAGA-KILGVSRDSVKSH 83 (163)
T ss_dssp CCCCCCGGGGGCCEECSTTCEECSGG-GTTSCEEEEECSCTTSHHHHHH-HHHHHHHHHHHHHTTC-EEEEEESSCHHHH
T ss_pred HHCCCCCCCCCEEEECCCCCEEEHHH-HCCCEEEEEEECCCCCCCCHHH-HHHHHHHHHHHHCCCE-EEEECCCCCHHHH
T ss_conf 34058999984473759999996189-8989699999667779862899-9999865565404772-8974036578999
Q ss_pred HHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCC-EEEEEEEEEEC-CCEEEEEEECCCCCCCCCCCCCCCCCHHH
Q ss_conf 66522358752786103671543332002247654344-10015999987-99699999748877787777732489999
Q gi|254780311|r 90 NAWGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFG-LRSWRYGALIK-DMVVESWFVEEGFSDNCATDPYEISSPEN 167 (177)
Q Consensus 90 ~aw~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g-~rs~R~a~Ii~-dG~I~~~~~E~~~~~~~~~d~~~vs~ae~ 167 (177)
..|....+. .+++++|..+++.+.+|+.......+.. ....|.++||+ ||+|++.|....+ ..++|+
T Consensus 84 ~~~~~~~~~-~~~~l~d~~~~~~~~~gv~~~~~~~~~~~~~~~~~tflID~~G~I~~~~~~~~~----------~~~~~~ 152 (163)
T 3gkn_A 84 DNFCAKQGF-AFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKV----------AGHADA 152 (163)
T ss_dssp HHHHHHHCC-SSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCS----------TTHHHH
T ss_pred HHHHHHCCC-CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCC----------CCCHHH
T ss_conf 999997298-866434832789997194003554675345556389999189989999819997----------869999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999986169
Q gi|254780311|r 168 VLKVIRESKK 177 (177)
Q Consensus 168 iL~~Lk~~~~ 177 (177)
||+.|++.+|
T Consensus 153 iL~~lka~~k 162 (163)
T 3gkn_A 153 VLAALKAHAK 162 (163)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHCC
T ss_conf 9999997535