HHsearch results for GI: 254780311 and protein with PDBid: 3hdc_A

>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.38  E-value=2.1e-12  Score=85.64  Aligned_cols=136  Identities=13%  Similarity=0.269  Sum_probs=92.2

Q ss_pred             EEEECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
Q ss_conf             99536706884036888-40235898389749999822887874100101046531124553101102343035401136
Q gi|254780311|r   12 HMRVATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVMN   90 (177)
Q Consensus        12 ~ikvGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~~   90 (177)
                      .+++|+.+|||++.+.+ +.+++++ ++||.+||+| .+.+.|.|..+ .+.....++.++..++ .++.++.++.+.  
T Consensus        14 ~~~vG~~aPdf~l~~~~G~~~~l~~-~~gk~~vl~f-~~~~C~~C~~~-~~~l~~~~~~~~~~~~-~vv~v~~d~~~~--   87 (158)
T 3hdc_A           14 LVRTGALAPNFKLPTLSGENKSLAQ-YRGKIVLVNF-WASWCPYCRDE-MPSMDRLVKSFPKGDL-VVLAVNVEKRFP--   87 (158)
T ss_dssp             CCCTTSBCCCCEEECTTSCEEESGG-GTTSEEEEEE-ECTTCHHHHHH-HHHHHHHHHHSSTTSE-EEEEEECSSSCC--
T ss_pred             CCCCCCCCCCEEEECCCCCEEEHHH-HCCCEEEEEE-ECCCCCCHHHH-CCCCCCCCCCCCCCCC-EEEEEECHHHHH--
T ss_conf             2679999988387899969980999-6999799999-89889740442-6211011100112433-147875408789--


Q ss_pred             HHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEE-CCCEEEEEEECCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             65223587527861036715433320022476543441001599998-79969999974887778777773248999999
Q gi|254780311|r   91 AWGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALI-KDMVVESWFVEEGFSDNCATDPYEISSPENVL  169 (177)
Q Consensus        91 aw~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii-~dG~I~~~~~E~~~~~~~~~d~~~vs~ae~iL  169 (177)
                      .+.+. ....++++.|.++.+.+.++..           +..+++++ .||+|.+.++=.          .+ .+.++++
T Consensus        88 ~~~~~-~~~~~p~~~D~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~G~----------~~-~~~~~~~  144 (158)
T 3hdc_A           88 EKYRR-APVSFNFLSDATGQVQQRYGAN-----------RLPDTFIVDRKGIIRQRVTGG----------IE-WDAPKVV  144 (158)
T ss_dssp             GGGGG-CCCSCEEEECTTSHHHHHTTCC-----------SSSEEEEECTTSBEEEEEESC----------CC-TTSHHHH
T ss_pred             HHHHH-CCCCCEEEECCCCHHHHHCCCC-----------CCCEEEEECCCCEEEEEEECC----------CC-CCHHHHH
T ss_conf             99987-3885002007752799985998-----------368799997999999999699----------99-8999999


Q ss_pred             HHHHHHC
Q ss_conf             9998616
Q gi|254780311|r  170 KVIRESK  176 (177)
Q Consensus       170 ~~Lk~~~  176 (177)
                      ++|++.+
T Consensus       145 ~~l~~L~  151 (158)
T 3hdc_A          145 SYLKSLE  151 (158)
T ss_dssp             HHHHTTC
T ss_pred             HHHHHCC
T ss_conf             9999778