HHsearch results for GI: 254780311 and protein with PDBid: 3hdc_A
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.38 E-value=2.1e-12 Score=85.64 Aligned_cols=136 Identities=13% Similarity=0.269 Sum_probs=92.2
Q ss_pred EEEECCCCCCCCCCCCC-CCEEHHHHHCCCEEEEEEECCCCCCCCCHHHCHHHHHHHHHHHHHCCCEEEEEECCCCHHHH
Q ss_conf 99536706884036888-40235898389749999822887874100101046531124553101102343035401136
Q gi|254780311|r 12 HMRVATVLPDGSKAFQW-KDVNTQDLFAGKRVFLFALPGAFTPTCSDHQLPGFEKIYDDLRCEGIEEVYCLSVNDAFVMN 90 (177)
Q Consensus 12 ~ikvGd~~Pd~tl~~~~-~~~~~~d~f~gKkVvL~~~P~AfTp~Ct~~~~~~~~~~~~~~~~~~~~~i~~~s~~d~~~~~ 90 (177)
.+++|+.+|||++.+.+ +.+++++ ++||.+||+| .+.+.|.|..+ .+.....++.++..++ .++.++.++.+.
T Consensus 14 ~~~vG~~aPdf~l~~~~G~~~~l~~-~~gk~~vl~f-~~~~C~~C~~~-~~~l~~~~~~~~~~~~-~vv~v~~d~~~~-- 87 (158)
T 3hdc_A 14 LVRTGALAPNFKLPTLSGENKSLAQ-YRGKIVLVNF-WASWCPYCRDE-MPSMDRLVKSFPKGDL-VVLAVNVEKRFP-- 87 (158)
T ss_dssp CCCTTSBCCCCEEECTTSCEEESGG-GTTSEEEEEE-ECTTCHHHHHH-HHHHHHHHHHSSTTSE-EEEEEECSSSCC--
T ss_pred CCCCCCCCCCEEEECCCCCEEEHHH-HCCCEEEEEE-ECCCCCCHHHH-CCCCCCCCCCCCCCCC-EEEEEECHHHHH--
T ss_conf 2679999988387899969980999-6999799999-89889740442-6211011100112433-147875408789--
Q ss_pred HHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEE-CCCEEEEEEECCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 65223587527861036715433320022476543441001599998-79969999974887778777773248999999
Q gi|254780311|r 91 AWGKKLEIKNVKLLPDGSGEFTRKMGMLVYKDNVGFGLRSWRYGALI-KDMVVESWFVEEGFSDNCATDPYEISSPENVL 169 (177)
Q Consensus 91 aw~~~~~~~~~~~l~D~~~~~~~~~g~~~~~~~~g~g~rs~R~a~Ii-~dG~I~~~~~E~~~~~~~~~d~~~vs~ae~iL 169 (177)
.+.+. ....++++.|.++.+.+.++.. +..+++++ .||+|.+.++=. .+ .+.++++
T Consensus 88 ~~~~~-~~~~~p~~~D~~~~~~~~~~v~-----------~~P~~~lid~~G~i~~~~~G~----------~~-~~~~~~~ 144 (158)
T 3hdc_A 88 EKYRR-APVSFNFLSDATGQVQQRYGAN-----------RLPDTFIVDRKGIIRQRVTGG----------IE-WDAPKVV 144 (158)
T ss_dssp GGGGG-CCCSCEEEECTTSHHHHHTTCC-----------SSSEEEEECTTSBEEEEEESC----------CC-TTSHHHH
T ss_pred HHHHH-CCCCCEEEECCCCHHHHHCCCC-----------CCCEEEEECCCCEEEEEEECC----------CC-CCHHHHH
T ss_conf 99987-3885002007752799985998-----------368799997999999999699----------99-8999999
Q ss_pred HHHHHHC
Q ss_conf 9998616
Q gi|254780311|r 170 KVIRESK 176 (177)
Q Consensus 170 ~~Lk~~~ 176 (177)
++|++.+
T Consensus 145 ~~l~~L~ 151 (158)
T 3hdc_A 145 SYLKSLE 151 (158)
T ss_dssp HHHHTTC
T ss_pred HHHHHCC
T ss_conf 9999778