HHsearch alignment for GI: 254780312 and conserved domain: COG3437

>COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].

Probab=99.90  E-value=6e-23  Score=158.49  Aligned_cols=118  Identities=32%  Similarity=0.528  Sum_probs=112.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCC---CCCEEEE
Q ss_conf             6999759989999999999988989999999799999997189989999836559997999999998589---9859999
Q gi|254780312|r    4 KILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDP---DLKVMFI   80 (122)
Q Consensus         4 rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~---~~pii~~   80 (122)
T Consensus        16 ~vl~vDD~~~~~~~~~~lL~~~~y~v~~ae~g~~a~kl~~~~~~dlvllD~~mp~mdg~ev~~~lk~~~p~t~~ip~i~l   95 (360)
T COG3437          16 TVLLVDDEPDNLEALRQLLRMIGYRVIEAENGEEALKLLQEEPPDLVLLDVRMPEMDGAEVLNKLKAMSPSTRRIPVILL   95 (360)
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEE
T ss_conf             48896586668999999997426414641475077887511688567764257776599999998724976565325998


Q ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf             43797899999997699869976979899999999996036
Q gi|254780312|r   81 TGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTIK  121 (122)
Q Consensus        81 s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~~  121 (122)
T Consensus        96 T~~~d~~~~~~~~~~g~~dyl~KP~~~~~l~~rv~~~~q~k  136 (360)
T COG3437          96 TAYADSEDRQRALEAGADDYLSKPISPKELVARVSSHLQLK  136 (360)
T ss_pred             EECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf             60587699999997247777528898899999999999998