HHsearch alignment for GI: 254780312 and conserved domain: PRK09468

>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=99.97  E-value=4.7e-29  Score=195.11  Aligned_cols=119  Identities=24%  Similarity=0.405  Sum_probs=115.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             66999759989999999999988989999999799999997189989999836559997999999998589985999943
Q gi|254780312|r    3 QKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFITG   82 (122)
Q Consensus         3 ~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s~   82 (122)
T Consensus         6 ~kILiVEDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~~~~~~~DlvilDi~lp~~dG~~l~~~iR~~~~~~pII~LTa   85 (239)
T PRK09468          6 YKILVVDDDMRLRALLERYLTEQGFQVRSAANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQNNPTPIIMLTA   85 (239)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEC
T ss_conf             78999909999999999999988999999899999999997589989998789988887346777875057877899946


Q ss_pred             CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf             797899999997699869976979899999999996036
Q gi|254780312|r   83 FAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTIK  121 (122)
Q Consensus        83 ~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~~  121 (122)
T Consensus        86 ~~~~~d~i~~l~~GADDYi~KPf~~~EL~aRI~allrR~  124 (239)
T PRK09468         86 KGEEVDRIVGLEMGADDYLPKPFNPRELLARIRAVLRRQ  124 (239)
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf             678789999997698688558999899999999998632