HHsearch alignment for GI: 254780312 and conserved domain: PRK09581

>PRK09581 pleD response regulator PleD; Reviewed.
Probab=99.97  E-value=1.6e-30  Score=203.97  Aligned_cols=120  Identities=25%  Similarity=0.373  Sum_probs=114.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH--CCCCCEE
Q ss_conf             98669997599899999999999889899999997999999971899899998365599979999999985--8998599
Q gi|254780312|r    1 MNQKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATEL--DPDLKVM   78 (122)
Q Consensus         1 M~~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~--~~~~pii   78 (122)
T Consensus         1 M~~rILiVdD~~~~~~~l~~~L~~~~y~v~~a~~G~eAL~~~~~~~PDLILlDi~MP~mdG~ev~r~Lk~~~~~~~iPVI   80 (457)
T PRK09581          1 MTARILVVDDIPANVKLLEAKLLAEYYTVLTASSGAEAIEICEREQPDIILLDVMMPGMDGFEVCRRLKSDPATAHIPVV   80 (457)
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf             99719999498999999999998789999998999999999971899989992877999999999999659888998499


Q ss_pred             EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf             994379789999999769986997697989999999999603
Q gi|254780312|r   79 FITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI  120 (122)
Q Consensus        79 ~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~  120 (122)
T Consensus        81 vlTa~~d~e~~~~al~~GA~DYL~KP~~~~~L~~ri~~l~r~  122 (457)
T PRK09581         81 MVTALDDPSDRVRGLEAGADDFLTKPINDVALFARVKSLTRL  122 (457)
T ss_pred             EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             997899999999998648878998999989999999999988