HHsearch alignment for GI: 254780312 and conserved domain: PRK09581
>PRK09581 pleD response regulator PleD; Reviewed.
Probab=99.97 E-value=1.6e-30 Score=203.97 Aligned_cols=120 Identities=25% Similarity=0.373 Sum_probs=114.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH--CCCCCEE
Q ss_conf 98669997599899999999999889899999997999999971899899998365599979999999985--8998599
Q gi|254780312|r 1 MNQKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATEL--DPDLKVM 78 (122)
Q Consensus 1 M~~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~--~~~~pii 78 (122)
T Consensus 1 M~~rILiVdD~~~~~~~l~~~L~~~~y~v~~a~~G~eAL~~~~~~~PDLILlDi~MP~mdG~ev~r~Lk~~~~~~~iPVI 80 (457)
T PRK09581 1 MTARILVVDDIPANVKLLEAKLLAEYYTVLTASSGAEAIEICEREQPDIILLDVMMPGMDGFEVCRRLKSDPATAHIPVV 80 (457)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 99719999498999999999998789999998999999999971899989992877999999999999659888998499
Q ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 994379789999999769986997697989999999999603
Q gi|254780312|r 79 FITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI 120 (122)
Q Consensus 79 ~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~ 120 (122)
T Consensus 81 vlTa~~d~e~~~~al~~GA~DYL~KP~~~~~L~~ri~~l~r~ 122 (457)
T PRK09581 81 MVTALDDPSDRVRGLEAGADDFLTKPINDVALFARVKSLTRL 122 (457)
T ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 997899999999998648878998999989999999999988