HHsearch alignment for GI: 254780312 and conserved domain: PRK09581
>PRK09581 pleD response regulator PleD; Reviewed.
Probab=99.15 E-value=2.3e-09 Score=77.11 Aligned_cols=117 Identities=14% Similarity=0.202 Sum_probs=102.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHC--CCCCEEEE
Q ss_conf 6699975998999999999998898999999979999999718998999983655999799999999858--99859999
Q gi|254780312|r 3 QKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELD--PDLKVMFI 80 (122)
Q Consensus 3 ~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~--~~~pii~~ 80 (122)
T Consensus 156 ~~il~v~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~~~~~~~~d~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~i~~~ 234 (457)
T PRK09581 156 GRILLVDDDVSQAERIANILKEE-FRVDVLSDPEEALIRAAEGNYDLIIVSASFENYDPLRLCSQLRSKERTRYVPILLL 234 (457)
T ss_pred CEEEEECCCHHHHHHHHHHHHHH-CCEEEECCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEE
T ss_conf 61999879679999999997533-24688548699998743579768997565676646899999971434357329999
Q ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 4379789999999769986997697989999999999603
Q gi|254780312|r 81 TGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI 120 (122)
Q Consensus 81 s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~ 120 (122)
T Consensus 235 ~~~~~~~~~~~~~~~g~~d~~~~~~~~~e~~~r~~~~~~~ 274 (457)
T PRK09581 235 VDEDEDPRLVKALELGVNDYLMRPIDKNELLARVRTQIRR 274 (457)
T ss_pred ECCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 5688616676664146522884378627555879999998