HHsearch alignment for GI: 254780312 and conserved domain: PRK10046
>PRK10046 dpiA two-component response regulator DpiA; Provisional.
Probab=99.96 E-value=1.4e-27 Score=186.34 Aligned_cols=120 Identities=19% Similarity=0.242 Sum_probs=112.6
Q ss_pred CCC--EEEEECCCHHHHHHHHHHHHH-CCCE-EEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf 986--699975998999999999998-8989-999999799999997189989999836559997999999998589985
Q gi|254780312|r 1 MNQ--KILLAEDDDDMRRFLIKALGK-AGYE-VVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLK 76 (122)
Q Consensus 1 M~~--rILiVDD~~~~r~~l~~~L~~-~G~~-v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~p 76 (122)
T Consensus 1 M~~~i~VLIVEDd~~v~~~l~~~L~~~~gf~~V~~A~~~~eA~~~l~~~~pDLvLLDi~LPd~~Glell~~lr~~~~~~~ 80 (225)
T PRK10046 1 MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGD 80 (225)
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 99988699995989999999999972899549999899999999997359999998289899979999999996487998
Q ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 99994379789999999769986997697989999999999603
Q gi|254780312|r 77 VMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI 120 (122)
Q Consensus 77 ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~ 120 (122)
T Consensus 81 VI~iTA~~d~~~~~~Al~~Ga~DYLvKPf~~erl~~~L~~y~~~ 124 (225)
T PRK10046 81 VVFTTAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTRFRQR 124 (225)
T ss_pred EEEEECCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHH
T ss_conf 89996899999999999749983102899999999999999999