HHsearch alignment for GI: 254780312 and conserved domain: PRK10336

>PRK10336 DNA-binding transcriptional regulator QseB; Provisional.
Probab=99.96  E-value=6.1e-29  Score=194.43  Aligned_cols=118  Identities=25%  Similarity=0.369  Sum_probs=114.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf             69997599899999999999889899999997999999971899899998365599979999999985899859999437
Q gi|254780312|r    4 KILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFITGF   83 (122)
Q Consensus         4 rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s~~   83 (122)
T Consensus         2 kILlVEDd~~l~~~l~~~L~~~g~~V~~a~~g~~a~~~~~~~~~DlvilDi~lP~~dG~~l~~~iR~~~~~~PII~lta~   81 (219)
T PRK10336          2 RILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLILTAR   81 (219)
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEECC
T ss_conf             89999389999999999999879999998999999999862896999997999999856310104652788878998068


Q ss_pred             CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf             97899999997699869976979899999999996036
Q gi|254780312|r   84 AAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTIK  121 (122)
Q Consensus        84 ~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~~  121 (122)
T Consensus        82 ~~~~d~i~~l~~GAdDYl~KPf~~~eL~ari~allrr~  119 (219)
T PRK10336         82 DALAERVEGLRLGADDYLCKPFALIEVAARLEALMRRT  119 (219)
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf             99999999997699888688976799999999996115