HHsearch alignment for GI: 254780312 and conserved domain: PRK10336
>PRK10336 DNA-binding transcriptional regulator QseB; Provisional.
Probab=99.96 E-value=6.1e-29 Score=194.43 Aligned_cols=118 Identities=25% Similarity=0.369 Sum_probs=114.8
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 69997599899999999999889899999997999999971899899998365599979999999985899859999437
Q gi|254780312|r 4 KILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFITGF 83 (122)
Q Consensus 4 rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s~~ 83 (122)
T Consensus 2 kILlVEDd~~l~~~l~~~L~~~g~~V~~a~~g~~a~~~~~~~~~DlvilDi~lP~~dG~~l~~~iR~~~~~~PII~lta~ 81 (219)
T PRK10336 2 RILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLILTAR 81 (219)
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEECC
T ss_conf 89999389999999999999879999998999999999862896999997999999856310104652788878998068
Q ss_pred CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
Q ss_conf 97899999997699869976979899999999996036
Q gi|254780312|r 84 AAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTIK 121 (122)
Q Consensus 84 ~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~~ 121 (122)
T Consensus 82 ~~~~d~i~~l~~GAdDYl~KPf~~~eL~ari~allrr~ 119 (219)
T PRK10336 82 DALAERVEGLRLGADDYLCKPFALIEVAARLEALMRRT 119 (219)
T ss_pred CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 99999999997699888688976799999999996115