HHsearch alignment for GI: 254780312 and conserved domain: PRK10360

>PRK10360 DNA-binding transcriptional activator UhpA; Provisional.
Probab=99.83  E-value=3.8e-19  Score=135.75  Aligned_cols=114  Identities=21%  Similarity=0.296  Sum_probs=105.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHH-CCCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             699975998999999999998-898999-999979999999718998999983655999799999999858998599994
Q gi|254780312|r    4 KILLAEDDDDMRRFLIKALGK-AGYEVV-SCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFIT   81 (122)
Q Consensus         4 rILiVDD~~~~r~~l~~~L~~-~G~~v~-~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s   81 (122)
T Consensus         3 ~I~IvDDh~l~r~gl~~~l~~~~~~~vv~~~~~~~~~l~~~~~~~~dvvllD~~mp~~~g~~~~~~l~~---~~~vivls   79 (196)
T PRK10360          3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPK---GMATIMLS   79 (196)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHC---CCCEEEEE
T ss_conf             999987979999999999812999599999899999999887449999998788788620779999843---87489997


Q ss_pred             CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf             379789999999769986997697989999999999603
Q gi|254780312|r   82 GFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI  120 (122)
Q Consensus        82 ~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~  120 (122)
T Consensus        80 ~~~~~~~~~~a~~~Ga~g~l~K~~~~~el~~aI~~v~~G  118 (196)
T PRK10360         80 VHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATG  118 (196)
T ss_pred             ECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf             307599999999759988997789999999999999869