HHsearch alignment for GI: 254780312 and conserved domain: PRK10651

>PRK10651 transcriptional regulator NarL; Provisional.
Probab=99.89  E-value=5e-22  Score=153.01  Aligned_cols=117  Identities=20%  Similarity=0.212  Sum_probs=110.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHHC-CCEEE-EECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             6999759989999999999988-98999-999979999999718998999983655999799999999858998599994
Q gi|254780312|r    4 KILLAEDDDDMRRFLIKALGKA-GYEVV-SCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFIT   81 (122)
Q Consensus         4 rILiVDD~~~~r~~l~~~L~~~-G~~v~-~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s   81 (122)
T Consensus         8 rVlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~ea~~~~~~~~pDlvllDl~lp~~~G~~~~~~l~~~~~~~~iivlt   87 (216)
T PRK10651          8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFS   87 (216)
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf             89998399999999999997589938999989999999998707999999959999988876423233457887467630


Q ss_pred             CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf             379789999999769986997697989999999999603
Q gi|254780312|r   82 GFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI  120 (122)
Q Consensus        82 ~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~  120 (122)
T Consensus        88 ~~~~~~~~~~al~~Ga~gyl~K~~~~~~L~~ai~~v~~g  126 (216)
T PRK10651         88 VSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG  126 (216)
T ss_pred             CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf             554188999999669878983789999999999999859