HHsearch alignment for GI: 254780312 and conserved domain: PRK10701
>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=99.95 E-value=7.5e-28 Score=187.88 Aligned_cols=117 Identities=19% Similarity=0.220 Sum_probs=111.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 66999759989999999999988989999999799999997189989999836559997999999998589985999943
Q gi|254780312|r 3 QKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFITG 82 (122)
Q Consensus 3 ~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s~ 82 (122)
T Consensus 2 ~kILlVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~~~~~~~DlvilDi~LP~~dG~~l~~~iR~~-~~~PiI~lta 80 (240)
T PRK10701 2 NTIVFVEDDAEVGSLIAAYLAKHDIDVTVEPRGDRAEETILREQPDLVLLDIMLPGKDGMTICRDLRPK-WSGPIVLLTS 80 (240)
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCC-CCCCEEEEEE
T ss_conf 989999799999999999998879999998999999999861799999992899767887876311025-8987899940
Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 79789999999769986997697989999999999603
Q gi|254780312|r 83 FAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI 120 (122)
Q Consensus 83 ~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~ 120 (122)
T Consensus 81 ~~~~~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr 118 (240)
T PRK10701 81 LDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQ 118 (240)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 57578899999768877641799879999999999965