HHsearch alignment for GI: 254780312 and conserved domain: PRK10701

>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=99.95  E-value=7.5e-28  Score=187.88  Aligned_cols=117  Identities=19%  Similarity=0.220  Sum_probs=111.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             66999759989999999999988989999999799999997189989999836559997999999998589985999943
Q gi|254780312|r    3 QKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFITG   82 (122)
Q Consensus         3 ~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~s~   82 (122)
T Consensus         2 ~kILlVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~~~~~~~DlvilDi~LP~~dG~~l~~~iR~~-~~~PiI~lta   80 (240)
T PRK10701          2 NTIVFVEDDAEVGSLIAAYLAKHDIDVTVEPRGDRAEETILREQPDLVLLDIMLPGKDGMTICRDLRPK-WSGPIVLLTS   80 (240)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCC-CCCCEEEEEE
T ss_conf             989999799999999999998879999998999999999861799999992899767887876311025-8987899940


Q ss_pred             CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf             79789999999769986997697989999999999603
Q gi|254780312|r   83 FAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI  120 (122)
Q Consensus        83 ~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~  120 (122)
T Consensus        81 ~~~~~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr  118 (240)
T PRK10701         81 LDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQ  118 (240)
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             57578899999768877641799879999999999965