HHsearch alignment for GI: 254780312 and conserved domain: PRK10766
>PRK10766 DNA-binding transcriptional regulator TorR; Provisional.
Probab=99.96 E-value=1.4e-28 Score=192.28 Aligned_cols=119 Identities=27% Similarity=0.392 Sum_probs=114.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 98669997599899999999999889899999997999999971899899998365599979999999985899859999
Q gi|254780312|r 1 MNQKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFI 80 (122)
Q Consensus 1 M~~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~~ 80 (122)
T Consensus 1 M~~kILlVEDD~~l~~~l~~~L~~~g~~V~~~~~~~~a~~~l~~~~~DlvilDi~lp~~~G~el~~~iR~~-~~~piI~l 79 (224)
T PRK10766 1 MSYHILVVEDEPVTRARLQGYFEQEGYRVSEAASGAGMREIMQNQHVDLILLDINLPGEDGLMLTRELRSR-STVGIILV 79 (224)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHC-CCCCEEEE
T ss_conf 99719999199999999999999879999998999999999960899999988999988766137676304-78556863
Q ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf 4379789999999769986997697989999999999603
Q gi|254780312|r 81 TGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI 120 (122)
Q Consensus 81 s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~ 120 (122)
T Consensus 80 ta~~~~~~~i~al~~GaddYl~KPf~~~eL~ari~allrR 119 (224)
T PRK10766 80 TGRTDSIDRIVGLEMGADDYVTKPFELRELLVRVKNLLWR 119 (224)
T ss_pred CCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 3558989999999849414513999889999999999725