HHsearch alignment for GI: 254780312 and conserved domain: PRK11083

>PRK11083 DNA-binding response regulator CreB; Provisional.
Probab=99.97  E-value=2.5e-29  Score=196.77  Aligned_cols=120  Identities=30%  Similarity=0.492  Sum_probs=116.1

Q ss_pred             CCC-EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             986-6999759989999999999988989999999799999997189989999836559997999999998589985999
Q gi|254780312|r    1 MNQ-KILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMF   79 (122)
Q Consensus         1 M~~-rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~~~~~pii~   79 (122)
T Consensus         1 M~~~kILiVEDd~~l~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~DlvilDi~LP~~~G~~l~~~iR~~~~~~pII~   80 (229)
T PRK11083          1 MQQPTILLVEDEQAIADTLVYALQSEGFTVEWFERGLPALDKLRQQPPDLVILDVGLPDISGFELCRQLRAFHPALPVIF   80 (229)
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf             99999999969999999999999988999999899999999997189989997388999876889999997089972999


Q ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC
Q ss_conf             94379789999999769986997697989999999999603
Q gi|254780312|r   80 ITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLTI  120 (122)
Q Consensus        80 ~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~~  120 (122)
T Consensus        81 lta~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~a~lrR  121 (229)
T PRK11083         81 LTARSDEVDRLVGLEIGADDYVAKPFSPREVAARVRTILRR  121 (229)
T ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             83678989999999759987730874289999999999976