HHsearch alignment for GI: 254780312 and conserved domain: PRK11107

>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=99.97  E-value=5.8e-29  Score=194.53  Aligned_cols=117  Identities=22%  Similarity=0.346  Sum_probs=111.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH--CCCCCEEEE
Q ss_conf             669997599899999999999889899999997999999971899899998365599979999999985--899859999
Q gi|254780312|r    3 QKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATEL--DPDLKVMFI   80 (122)
Q Consensus         3 ~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~--~~~~pii~~   80 (122)
T Consensus       669 lrVLvVEDN~iN~~vi~~lL~~lG~~v~~A~nG~eAle~~~~~~fDLILMDiqMP~MDG~eATr~IR~~~~~~~~PIIAl  748 (920)
T PRK11107        669 LTVMAVDDNPANLKLIGALLEEQVEHVVLCDSGHQAVELAKQRPFDLIFMDIQMPGMDGIRACELIRQLPHNQNTPIIAV  748 (920)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf             74999848899999999999984988999899999999974799978998899999989999999981867898959999


Q ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf             437978999999976998699769798999999999960
Q gi|254780312|r   81 TGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLT  119 (122)
Q Consensus        81 s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~  119 (122)
T Consensus       749 TA~a~~~dre~cl~aGMddyLtKPI~~~~L~~~L~~~~~  787 (920)
T PRK11107        749 TAHAMAGERERLLGAGMDDYLAKPIDEAALKQVLLRWKP  787 (920)
T ss_pred             ECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCC
T ss_conf             799898999999977999387287999999999998678