HHsearch alignment for GI: 254780312 and conserved domain: PRK11107
>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=99.97 E-value=5.8e-29 Score=194.53 Aligned_cols=117 Identities=22% Similarity=0.346 Sum_probs=111.5
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH--CCCCCEEEE
Q ss_conf 669997599899999999999889899999997999999971899899998365599979999999985--899859999
Q gi|254780312|r 3 QKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIELARRATEL--DPDLKVMFI 80 (122)
Q Consensus 3 ~rILiVDD~~~~r~~l~~~L~~~G~~v~~a~~g~~al~~~~~~~~dlii~D~~mP~~dG~el~~~ir~~--~~~~pii~~ 80 (122)
T Consensus 669 lrVLvVEDN~iN~~vi~~lL~~lG~~v~~A~nG~eAle~~~~~~fDLILMDiqMP~MDG~eATr~IR~~~~~~~~PIIAl 748 (920)
T PRK11107 669 LTVMAVDDNPANLKLIGALLEEQVEHVVLCDSGHQAVELAKQRPFDLIFMDIQMPGMDGIRACELIRQLPHNQNTPIIAV 748 (920)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 74999848899999999999984988999899999999974799978998899999989999999981867898959999
Q ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 437978999999976998699769798999999999960
Q gi|254780312|r 81 TGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLLT 119 (122)
Q Consensus 81 s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~l~ 119 (122)
T Consensus 749 TA~a~~~dre~cl~aGMddyLtKPI~~~~L~~~L~~~~~ 787 (920)
T PRK11107 749 TAHAMAGERERLLGAGMDDYLAKPIDEAALKQVLLRWKP 787 (920)
T ss_pred ECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCC
T ss_conf 799898999999977999387287999999999998678