HHsearch alignment for GI: 254780312 and conserved domain: cd02068

>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=93.25  E-value=0.77  Score=26.05  Aligned_cols=89  Identities=15%  Similarity=0.125  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHCCCEEEEECCH--HHHHH-HHHHCCCCEEEEEEECCCCC-HHHHHHHHHHHCCCCCEEEEECCCCHHHHH
Q ss_conf             999999999889899999997--99999-99718998999983655999-799999999858998599994379789999
Q gi|254780312|r   15 RRFLIKALGKAGYEVVSCNNG--ASAYD-KVREEPFSLLLTDIVMPEMD-GIELARRATELDPDLKVMFITGFAAVALNP   90 (122)
Q Consensus        15 r~~l~~~L~~~G~~v~~a~~g--~~al~-~~~~~~~dlii~D~~mP~~d-G~el~~~ir~~~~~~pii~~s~~~~~~~~~   90 (122)
T Consensus         5 l~ylaa~L~~~G~~v~~~d~~~~~~~~e~~~~~~~pdvvg~s~~~~~~~~~~~~~~~~k~~~p~~~iv~GG~h~t~-~p~   83 (127)
T cd02068           5 LAYLAAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISLMTSAIYEALELAKIAKEVLPNVIVVVGGPHATF-FPE   83 (127)
T ss_pred             HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC-CHH
T ss_conf             9999999997899579985787620399998649969999997688999999999999997899789985987454-999


Q ss_pred             HHHHCCCCEEEECC
Q ss_conf             99976998699769
Q gi|254780312|r   91 DSNAPKNAKVLSKP  104 (122)
Q Consensus        91 ~~~~~g~~~~l~KP  104 (122)
T Consensus        84 ~~l~~~~~D~vv~G   97 (127)
T cd02068          84 EILEEPGVDFVVIG   97 (127)
T ss_pred             HHHHCCCCCEEEEC
T ss_conf             99707587789968