RPSBLAST alignment of GI: 254780312 and protein with PDBid: 2j48
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus} Length = 119
Score = 71.3 bits (174), Expect = 6e-14
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
Query: 4 KILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIE 63
ILL E++D+ + + L AG++V+ +G++A D++ ++L P+ +
Sbjct: 3 HILLLEEEDEAATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAWPPPDQSCLL 62
Query: 64 LAR--RATELDPDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLL 118
L + R + DP ++ G V + A + +LSKP + L+ + L
Sbjct: 63 LLQHLREHQADPHPPLVLFLGEPPVDPLLTAQA---SAILSKPLDPQLLLTTLQGLC 116