RPSBLAST alignment of GI: 254780312 and protein with PDBid: 3cu5

>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Length = 141
 Score = 89.3 bits (221), Expect = 2e-19
 Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)

Query: 1   MNQKILLAEDDDDMRRFLIKALGKAGYEVV---SCNNGASAYDKVREEPFSLLLTDIVMP 57
           M+ +IL+ +D+   R  LI  +             ++G +A     + P ++LLTD+ MP
Sbjct: 1   MSLRILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHPPNVLLTDVRMP 60

Query: 58  EMDGIELARRATELDPDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRL 117
            MDGIEL     +L PD  V+F++G++       +   +  + + KP    ++++ + + 
Sbjct: 61  RMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALKQS 120

Query: 118 L 118
           +
Sbjct: 121 I 121