RPSBLAST alignment of GI: 254780312 and protein with PDBid: 3cu5
>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg} Length = 141
Score = 89.3 bits (221), Expect = 2e-19
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 1 MNQKILLAEDDDDMRRFLIKALGKAGYEVV---SCNNGASAYDKVREEPFSLLLTDIVMP 57
M+ +IL+ +D+ R LI + ++G +A + P ++LLTD+ MP
Sbjct: 1 MSLRILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHPPNVLLTDVRMP 60
Query: 58 EMDGIELARRATELDPDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRL 117
MDGIEL +L PD V+F++G++ + + + + KP ++++ + +
Sbjct: 61 RMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALKQS 120
Query: 118 L 118
+
Sbjct: 121 I 121