RPSBLAST alignment of GI: 254780312 and protein with PDBid: 3dzd

>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A Length = 368

 Score = 91.1 bits (226), Expect = 6e-20
 Identities = 27/115 (23%), Positives = 51/115 (44%)

Query: 4   KILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDGIE 63
           ++L+ +D++ +   L   L + GY   +      A  K++E  F +++ D+ MP+ DG+ 
Sbjct: 2   RVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGVN 61

Query: 64  LARRATELDPDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLL 118
                 E  PD  V+ ITG  +V     +      + L KPF +   +  +    
Sbjct: 62  FIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAF 116