RPSBLAST alignment of GI: 254780312 and protein with PDBid: 3f6p
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} PDB: 2zwm_A Length = 120
Score = 98.9 bits (247), Expect = 3e-22
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 1 MNQKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMD 60
M++KIL+ +D+ + L L K GYEV ++G A + V E L+L DI++P D
Sbjct: 1 MDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKD 60
Query: 61 GIELARRATELDPDLKVMFITGFAAV-----ALNPDSNAPKNAKVLSKPFHLRDLVNEVN 115
G+E+ R + D+ ++ +T + L ++ ++KPF R+L+ V
Sbjct: 61 GVEVCREVRK-KYDMPIIMLTAKDSEIDKVIGLEIGADD-----YVTKPFSTRELLARVK 114
Query: 116 RLL 118
L
Sbjct: 115 ANL 117