HHsearch alignment for GI: 254780313 and conserved domain: COG1889
>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=97.06 E-value=0.0045 Score=39.70 Aligned_cols=120 Identities=18% Similarity=0.236 Sum_probs=78.3
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC--------CCCC-CCCCCCEEEECCCCHHHHHHHHHHHCCCC
Q ss_conf 13796788850455306899999706878832786411--------2133-34698178301122079999999731388
Q gi|254780313|r 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID--------ILDM-EPILGVKFFKFDFLDLDSWEFIRQAIGGN 135 (227)
Q Consensus 65 ~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVD--------l~~~-~~i~gv~~~~gDi~~~~~~~~i~~~l~~~ 135 (227)
T Consensus 74 i~~g~~VLYLGAasGTTvSHVSDIv~----~G~iYaVEfs~R~~reLl~~a~~R~Ni~PIL~DA~~P~~Y~~~----Ve~ 145 (231)
T COG1889 74 IKEGSKVLYLGAASGTTVSHVSDIVG----EGRIYAVEFSPRPMRELLDVAEKRPNIIPILEDARKPEKYRHL----VEK 145 (231)
T ss_pred CCCCCEEEEEECCCCCCHHHHHHCCC----CCCEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHH----CCC
T ss_conf 69998789950367985767776047----8708999964446999999987478740020136883776531----245
Q ss_pred CCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC--EEEEEEEC---CCCHHH-----HHHHHHHHCCEEEE
Q ss_conf 748975320211022210157889899988987641148774--69999305---999899-----99999862584699
Q gi|254780313|r 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG--DFLVKTFQ---GGTTND-----ILCLLKKHFQKVIH 205 (227)
Q Consensus 136 ~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG--~fV~K~F~---G~~~~~-----l~~~l~~~F~~V~~ 205 (227)
T Consensus 146 VDviy~DVAQ-------p~Qa~I------~~~Na~~FLk~~G~~~i~iKArSIdvT~dp~~vf~~ev~kL~~~~f~i~e~ 212 (231)
T COG1889 146 VDVIYQDVAQ-------PNQAEI------LADNAEFFLKKGGYVVIAIKARSIDVTADPEEVFKDEVEKLEEGGFEILEV 212 (231)
T ss_pred CCEEEEECCC-------CHHHHH------HHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 4389983688-------107899------998899732169739999985123045898999999999998569504677