HHsearch alignment for GI: 254780313 and conserved domain: KOG1540

Probab=97.68  E-value=0.00057  Score=45.31  Aligned_cols=140  Identities=19%  Similarity=0.203  Sum_probs=90.7

Q ss_pred             CCHHHHHHHHHHHHHHC-----CC--------C--CCCCEEEEEECCCCHHHHHHHHHHCCC--CCCEEEEEECCCC---
Q ss_conf             84479999999998645-----83--------1--379678885045530689999970687--8832786411213---
Q gi|254780313|r   46 GWRARSAYKLLQINEKH-----QI--------L--QSNRRIVDLGSSPGSWSQVAARITGSN--ANNTRVVAIDILD---  105 (227)
Q Consensus        46 gyrsRaafKL~eId~kf-----~l--------~--k~g~~VlDLGaaPGgWsQva~~~~~~~--~~~~~VigVDl~~---  105 (227)
T Consensus        64 ~vF~~vA~~YD~mND~mSlGiHRlWKd~~v~~L~p~~~m~~lDvaGGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL  143 (296)
T KOG1540          64 HVFESVAKKYDIMNDAMSLGIHRLWKDMFVSKLGPGKGMKVLDVAGGTGDIAFRILRHVKSQFGDRESKVTVLDINPHML  143 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHH
T ss_conf             99998888887788876212367888876621587778758983477525677798761134577776179993898999


Q ss_pred             -----------CCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             -----------334698178301122079999999731388748975320211022210157889899988987641148
Q gi|254780313|r  106 -----------MEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN  174 (227)
Q Consensus       106 -----------~~~i~gv~~~~gDi~~~~~~~~i~~~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk  174 (227)
T Consensus       144 ~vgkqRa~~~~l~~~~~~~w~~~dAE~Lp-------Fdd~s~D~yTiaf-----GIRN~th~------~k~l~EAYRVLK  205 (296)
T KOG1540         144 AVGKQRAKKRPLKASSRVEWVEGDAEDLP-------FDDDSFDAYTIAF-----GIRNVTHI------QKALREAYRVLK  205 (296)
T ss_pred             HHHHHHHHHCCCCCCCCEEEEECCCCCCC-------CCCCCCEEEEEEC-----CEECCCCH------HHHHHHHHHHCC
T ss_conf             99987775159776871699947701089-------9977511588842-----11147877------899999987527


Q ss_pred             CCCEEEEEEECCCCHHHHHHHHHHHCCEE
Q ss_conf             77469999305999899999998625846
Q gi|254780313|r  175 IGGDFLVKTFQGGTTNDILCLLKKHFQKV  203 (227)
Q Consensus       175 ~gG~fV~K~F~G~~~~~l~~~l~~~F~~V  203 (227)
T Consensus       206 pGGrf~cLeFskv~~~~l~~fy~~ysf~V  234 (296)
T KOG1540         206 PGGRFSCLEFSKVENEPLKWFYDQYSFDV  234 (296)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf             78679999735454077899997122232