HHsearch alignment for GI: 254780313 and conserved domain: KOG1661
>KOG1661 consensus.
Probab=92.71 E-value=0.04 Score=33.78 Aligned_cols=140 Identities=24% Similarity=0.279 Sum_probs=70.0
Q ss_pred CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC-CCEEEECCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 831379678885045530689999970687883278641121333469-8178301122079999999731388748975
Q gi|254780313|r 63 QILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPIL-GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141 (227)
Q Consensus 63 ~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~~~i~-gv~~~~gDi~~~~~~~~i~~~l~~~~DlVlS 141 (227)
T Consensus 78 ~~L~pG~s~LdvGsGSGYLt~~~~~mvg~~g~--~~~GIEh~~e-LVe~Sk~nl~k~i~~~e~~~~~~---~~~l~ivvG 151 (237)
T KOG1661 78 DHLQPGASFLDVGSGSGYLTACFARMVGATGG--NVHGIEHIPE-LVEYSKKNLDKDITTSESSSKLK---RGELSIVVG 151 (237)
T ss_pred HHHCCCCCEEECCCCCCHHHHHHHHHHCCCCC--CCCCHHHHHH-HHHHHHHHHHHHCCCCHHHHHHC---CCCEEEEEC
T ss_conf 86234731013378740899999999457776--6514441599-99999987776504730455641---486479967
Q ss_pred CCCHHHCCCCCCHH----HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHH---------HHHHHHHCCEEEEECC
Q ss_conf 32021102221015----7889899988987641148774699993059998999---------9999862584699768
Q gi|254780313|r 142 DMAYPTIGHRKIDH----LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI---------LCLLKKHFQKVIHVKP 208 (227)
Q Consensus 142 Dmapn~SG~~~~D~----~~~~~L~~~al~~A~~~Lk~gG~fV~K~F~G~~~~~l---------~~~l~~~F~~V~~~KP 208 (227)
T Consensus 152 Dgr~g~~e~a~YDaIhvGAaa~~~----pq~l~dqL~~gGrllip~~~~~~~q~~~~~dk~~~gki~~~~~f~-v~-yvP 225 (237)
T KOG1661 152 DGRKGYAEQAPYDAIHVGAAASEL----PQELLDQLKPGGRLLIPVGQDGGTQYLRQIDKNEDGKIKLRTLFS-VR-YVP 225 (237)
T ss_pred CCCCCCCCCCCCCEEEECCCCCCC----HHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEC-EE-EEE
T ss_conf 762347756876657876676224----799998634387289861146730677760454567402357501-27-886
Q ss_pred CCCCCC
Q ss_conf 665755
Q gi|254780313|r 209 VASRAE 214 (227)
Q Consensus 209 ~aSR~~ 214 (227)
T Consensus 226 lt~~~~ 231 (237)
T KOG1661 226 LTSRES 231 (237)
T ss_pred CCCCCC
T ss_conf 666555