HHsearch alignment for GI: 254780313 and conserved domain: KOG2940

Probab=95.65  E-value=0.012  Score=37.02  Aligned_cols=136  Identities=21%  Similarity=0.349  Sum_probs=78.7

Q ss_pred             HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC-C
Q ss_conf             999964089999999881844799999999986458313796788850455306899999706878832786411213-3
Q gi|254780313|r   28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD-M  106 (227)
Q Consensus        28 ~W~~r~~~D~y~~~Ak~~gyrsRaafKL~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~-~  106 (227)
T Consensus        44 a~~~d~k~d-ylkeeig~r----l------aDrvfD~kk~fp~a~diGcs~G~v~r---hl~~e~--vekli~~DtS~~M  107 (325)
T KOG2940          44 AWLSDQKND-YLKEEIGDR----L------ADRVFDCKKSFPTAFDIGCSLGAVKR---HLRGEG--VEKLIMMDTSYDM  107 (325)
T ss_pred             HHCCHHHHH-HHHHHHHHH----H------HHHHHHHHHHCCCEEECCCCHHHHHH---HHHHCC--HHHEEEEECCHHH
T ss_conf             635100016-899998888----8------89998776607520440655446568---877525--1340664041679


Q ss_pred             ----C--CCCCCE--EEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf             ----3--469817--83011220799999997313887489753202110222101578898999889876411487746
Q gi|254780313|r  107 ----E--PILGVK--FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD  178 (227)
Q Consensus       107 ----~--~i~gv~--~~~gDi~~~~~~~~i~~~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~  178 (227)
T Consensus       108 ~~s~~~~qdp~i~~~~~v~D---EE~Ld----f~ens~DLiisSlsl----HW~NdLPg~m~~c-------k~~lKPDg~  169 (325)
T KOG2940         108 IKSCRDAQDPSIETSYFVGD---EEFLD----FKENSVDLIISSLSL----HWTNDLPGSMIQC-------KLALKPDGL  169 (325)
T ss_pred             HHHHHCCCCCCEEEEEEECC---HHCCC----CCCCCHHHHHHHHHH----HHHCCCCHHHHHH-------HHHCCCCCC
T ss_conf             99753268985379997255---10156----553501112654334----5640483689998-------874289751


Q ss_pred             EEEEEECCCCHHHHHHHHH
Q ss_conf             9999305999899999998
Q gi|254780313|r  179 FLVKTFQGGTTNDILCLLK  197 (227)
Q Consensus       179 fV~K~F~G~~~~~l~~~l~  197 (227)
T Consensus       170 FiasmlggdTLyELR~slq  188 (325)
T KOG2940         170 FIASMLGGDTLYELRCSLQ  188 (325)
T ss_pred             CHHHHHCCCCHHHHHHHHH
T ss_conf             2167756440999998763