HHsearch alignment for GI: 254780313 and conserved domain: KOG3420
>KOG3420 consensus.
Probab=96.32 E-value=0.01 Score=37.41 Aligned_cols=126 Identities=22% Similarity=0.251 Sum_probs=82.8
Q ss_pred HHHHHHHCCCHHHHHHHHHCCHHH---HHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 999996408999999988184479---99999999864583137967888504553068999997068788327864112
Q gi|254780313|r 27 RDWLNRHINDPYVQRAQLEGWRAR---SAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103 (227)
Q Consensus 27 ~~W~~r~~~D~y~~~Ak~~gyrsR---aafKL~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl 103 (227)
T Consensus 6 l~~~L~~v~gFeKpk~~LEQY~T~p~iAasM~~~Ih~Tygdi-Egkkl~DLgcgcGmLs-~a~sm~~----~e~vlGfDI 79 (185)
T KOG3420 6 LESRLQQVDGFEKPKLLLEQYPTRPHIAASMLYTIHNTYGDI-EGKKLKDLGCGCGMLS-IAFSMPK----NESVLGFDI 79 (185)
T ss_pred HHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCC-CCCCHHHHCCCHHHHH-HHHHCCC----CCEEEEEEC
T ss_conf 999998740644431245517996789999999998620120-4746225247611567-7750578----733786405
Q ss_pred CCC---------CCC-CCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 133---------346-9817830112207999999973138874897532021102221015788989998898764
Q gi|254780313|r 104 LDM---------EPI-LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170 (227)
Q Consensus 104 ~~~---------~~i-~gv~~~~gDi~~~~~~~~i~~~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~ 170 (227)
T Consensus 80 dpeALEIf~rNaeEfEvqidlLqcdildle~-------~~g~fDtaviNp-pFGTk~~~aDm----~fv~~al~~~~ 144 (185)
T KOG3420 80 DPEALEIFTRNAEEFEVQIDLLQCDILDLEL-------KGGIFDTAVINP-PFGTKKKGADM----EFVSAALKVAS 144 (185)
T ss_pred CHHHHHHHHHCHHHHHHHHHEEEEECCCHHC-------CCCEEEEEEECC-CCCCCCCCCCH----HHHHHHHHHHH
T ss_conf 8899999861668752334212222155110-------587676678668-98764344338----99999999999