HHsearch alignment for GI: 254780313 and conserved domain: PRK00536
>PRK00536 speE spermidine synthase; Provisional.
Probab=94.73 E-value=0.38 Score=27.64 Aligned_cols=128 Identities=9% Similarity=-0.012 Sum_probs=70.8
Q ss_pred HHHHHCCCCC--CCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC--C----CCCCCCEEEECCCCHHHH--HH
Q ss_conf 9986458313--796788850455306899999706878832786411213--3----346981783011220799--99
Q gi|254780313|r 57 QINEKHQILQ--SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD--M----EPILGVKFFKFDFLDLDS--WE 126 (227)
Q Consensus 57 eId~kf~l~k--~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~--~----~~i~gv~~~~gDi~~~~~--~~ 126 (227)
T Consensus 60 EMl~Hvpl~~Hp~Pk~VLIIGGGDGG---~~REvlKH~---~~v~~VEID~~Vv~~sk~ylP~~---~~~~~dpr~~~~~ 130 (262)
T PRK00536 60 ELLAHMGGCTKKELKEVLIVDGFDLE---LAHQLFKYD---THVDFVQADEKILDSFISFFPHF---HEVKNNKNFTHAK 130 (262)
T ss_pred HHHHCHHHHCCCCCCEEEEECCCCHH---HHHHHHCCC---CEEEEEEECHHHHHHHHHHCHHH---HHHHCCCCEEHHH
T ss_conf 88753023218997879998687559---999987289---76699996789999999978565---6541399611399
Q ss_pred HHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----ECCCCHHHHHHHHHHHCCE
Q ss_conf 999731388748975320211022210157889899988987641148774699993----0599989999999862584
Q gi|254780313|r 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT----FQGGTTNDILCLLKKHFQK 202 (227)
Q Consensus 127 ~i~~~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~----F~G~~~~~l~~~l~~~F~~ 202 (227)
T Consensus 131 ~~~~~~~~~fDvIIvDs---------l~~~~~~~~l-------~~~L~~~Gi~v~Q~esp~~~~~~~~~~~~~~~~~F~~ 194 (262)
T PRK00536 131 QLLDLDIKKYDLIICLQ---------EPDIHKIDGL-------KRMLKEDGVFISVAKHPLLEHVSMQNALKNMGHFFSI 194 (262)
T ss_pred HHHHHCCCCCCEEEECC---------CCCCCHHHHH-------HHHHCCCCEEEECCCCHHHCHHHHHHHHHHHHHHCCE
T ss_conf 98761547668899889---------9980549999-------9985899899983897120799999999998865994
Q ss_pred EEEECCC
Q ss_conf 6997686
Q gi|254780313|r 203 VIHVKPV 209 (227)
Q Consensus 203 V~~~KP~ 209 (227)
T Consensus 195 ~~~y~~~ 201 (262)
T PRK00536 195 AMPFVAP 201 (262)
T ss_pred EEEEECC
T ss_conf 5998446