HHsearch alignment for GI: 254780313 and conserved domain: PRK04266

>PRK04266 fibrillarin; Provisional.
Probab=97.99  E-value=6.3e-05  Score=51.32  Aligned_cols=121  Identities=17%  Similarity=0.215  Sum_probs=83.7

Q ss_pred             CCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC--------C-CCCCCCEEEECCCCHHHHHHHHHHHCCCC
Q ss_conf             13796788850455306899999706878832786411213--------3-34698178301122079999999731388
Q gi|254780313|r   65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD--------M-EPILGVKFFKFDFLDLDSWEFIRQAIGGN  135 (227)
Q Consensus        65 ~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~--------~-~~i~gv~~~~gDi~~~~~~~~i~~~l~~~  135 (227)
T Consensus        70 i~~gskVLYLGAasGTTVSHvsDiV~----~G~VyAVE~spr~~RdL~~la~~R~NivPIl~DAr~P~~Y~~~---v-~~  141 (226)
T PRK04266         70 IKKGSKVLYLGAASGTTVSHVSDIVE----EGRVYAVEFAPRVMRELLLVAEERKNIIPILGDARKPEEYAHL---V-EK  141 (226)
T ss_pred             CCCCCEEEEECCCCCCCHHHHHHHCC----CCEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH---C-CC
T ss_conf             58998799954777984888987517----9649999827077899999985089962575467884564420---5-65


Q ss_pred             CCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE--EEEC--C-CC----HHHHHHHHH-HHCCEEEE
Q ss_conf             7489753202110222101578898999889876411487746999--9305--9-99----899999998-62584699
Q gi|254780313|r  136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV--KTFQ--G-GT----TNDILCLLK-KHFQKVIH  205 (227)
Q Consensus       136 ~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~--K~F~--G-~~----~~~l~~~l~-~~F~~V~~  205 (227)
T Consensus       142 VD~i~qDvA-------Q~dQa~------I~~~Na~~FLk~gG~~~l~iKA~Sid~t~~p~~vf~~~~~~L~~~~~~~~e~  208 (226)
T PRK04266        142 VDVIYQDVA-------QPNQAE------IAADNADIFLKPGGYLMLAIKARSIDVTKDPKEIFKEEIKKLEEGGFEILEV  208 (226)
T ss_pred             CCEEEEECC-------CHHHHH------HHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             658996067-------742899------9999999860159889999974235646898999999999998769966899


Q ss_pred             E
Q ss_conf             7
Q gi|254780313|r  206 V  206 (227)
Q Consensus       206 ~  206 (227)
T Consensus       209 i  209 (226)
T PRK04266        209 V  209 (226)
T ss_pred             E
T ss_conf             8