HHsearch alignment for GI: 254780313 and conserved domain: PRK04457
>PRK04457 spermidine synthase; Provisional.
Probab=97.64 E-value=0.0027 Score=41.08 Aligned_cols=130 Identities=18% Similarity=0.247 Sum_probs=85.6
Q ss_pred CCCC-CCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCC----------CC--CCCCEEEECCCCHHHHHHHHHH
Q ss_conf 3137-967888504553068999997068788327864112133----------34--6981783011220799999997
Q gi|254780313|r 64 ILQS-NRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM----------EP--ILGVKFFKFDFLDLDSWEFIRQ 130 (227)
Q Consensus 64 l~k~-g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~----------~~--i~gv~~~~gDi~~~~~~~~i~~ 130 (227)
T Consensus 62 Lf~p~Pk~vl~iGLGgGsl~k~~~~~~P----~~~i~~VEIdp~Vi~vAr~~F~lP~dd~Rl~V~~~Dg-----~~fv~~ 132 (262)
T PRK04457 62 LFNPRPQHILQIGLGGGSFAKFIDTYLP----DTRQTAVEINPQVIAVARNHFELPFEDEKFEIIEADG-----AEYIKV 132 (262)
T ss_pred HCCCCCCEEEEEECCHHHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEECCH-----HHHHHH
T ss_conf 6589978699992570199999998398----6758999878899999998657999997269995538-----999854
Q ss_pred HCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC-CCHHHHHHHHHHHCC-EEEEECC
Q ss_conf 31388748975320211022210157889899988987641148774699993059-998999999986258-4699768
Q gi|254780313|r 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG-GTTNDILCLLKKHFQ-KVIHVKP 208 (227)
Q Consensus 131 ~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F~G-~~~~~l~~~l~~~F~-~V~~~KP 208 (227)
T Consensus 133 -~~~~~DvI~vD~-fd~~g~~~--~L~t----~~Fy~~c~~~L~~~Gvlv~Nl~~~~~~~~~~l~~i~~~F~~~~~~~~~ 204 (262)
T PRK04457 133 -FPASTDVILVDG-FDGEQIVD--ALVT----QPFFRDCRNALSSDGVFVTNLWSGDKRYQRYIERLLSVFEGRVLELPA 204 (262)
T ss_pred -CCCCCCEEEEEC-CCCCCCCC--CCCC----HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEC
T ss_conf -867778899968-89888860--0082----999999998649893999986889986599999999972873999725
Q ss_pred CC
Q ss_conf 66
Q gi|254780313|r 209 VA 210 (227)
Q Consensus 209 ~a 210 (227)
T Consensus 205 ~~ 206 (262)
T PRK04457 205 ES 206 (262)
T ss_pred CC
T ss_conf 89