HHsearch alignment for GI: 254780313 and conserved domain: PRK04457

>PRK04457 spermidine synthase; Provisional.
Probab=97.64  E-value=0.0027  Score=41.08  Aligned_cols=130  Identities=18%  Similarity=0.247  Sum_probs=85.6

Q ss_pred             CCCC-CCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCC----------CC--CCCCEEEECCCCHHHHHHHHHH
Q ss_conf             3137-967888504553068999997068788327864112133----------34--6981783011220799999997
Q gi|254780313|r   64 ILQS-NRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM----------EP--ILGVKFFKFDFLDLDSWEFIRQ  130 (227)
Q Consensus        64 l~k~-g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~----------~~--i~gv~~~~gDi~~~~~~~~i~~  130 (227)
T Consensus        62 Lf~p~Pk~vl~iGLGgGsl~k~~~~~~P----~~~i~~VEIdp~Vi~vAr~~F~lP~dd~Rl~V~~~Dg-----~~fv~~  132 (262)
T PRK04457         62 LFNPRPQHILQIGLGGGSFAKFIDTYLP----DTRQTAVEINPQVIAVARNHFELPFEDEKFEIIEADG-----AEYIKV  132 (262)
T ss_pred             HCCCCCCEEEEEECCHHHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEECCH-----HHHHHH
T ss_conf             6589978699992570199999998398----6758999878899999998657999997269995538-----999854


Q ss_pred             HCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC-CCHHHHHHHHHHHCC-EEEEECC
Q ss_conf             31388748975320211022210157889899988987641148774699993059-998999999986258-4699768
Q gi|254780313|r  131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG-GTTNDILCLLKKHFQ-KVIHVKP  208 (227)
Q Consensus       131 ~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F~G-~~~~~l~~~l~~~F~-~V~~~KP  208 (227)
T Consensus       133 -~~~~~DvI~vD~-fd~~g~~~--~L~t----~~Fy~~c~~~L~~~Gvlv~Nl~~~~~~~~~~l~~i~~~F~~~~~~~~~  204 (262)
T PRK04457        133 -FPASTDVILVDG-FDGEQIVD--ALVT----QPFFRDCRNALSSDGVFVTNLWSGDKRYQRYIERLLSVFEGRVLELPA  204 (262)
T ss_pred             -CCCCCCEEEEEC-CCCCCCCC--CCCC----HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEC
T ss_conf             -867778899968-89888860--0082----999999998649893999986889986599999999972873999725


Q ss_pred             CC
Q ss_conf             66
Q gi|254780313|r  209 VA  210 (227)
Q Consensus       209 ~a  210 (227)
T Consensus       205 ~~  206 (262)
T PRK04457        205 ES  206 (262)
T ss_pred             CC
T ss_conf             89