HHsearch alignment for GI: 254780313 and conserved domain: PRK05396

Probab=90.74  E-value=1.4  Score=24.02  Aligned_cols=97  Identities=19%  Similarity=0.191  Sum_probs=56.1

Q ss_pred             CCCEEEEEECCCCH--HHHHHHHHHCCCCCCEEEEEECCCCCC----CCCCCEEEECCCCHHHHHHHHHHHCCC-CCCEE
Q ss_conf             79678885045530--689999970687883278641121333----469817830112207999999973138-87489
Q gi|254780313|r   67 SNRRIVDLGSSPGS--WSQVAARITGSNANNTRVVAIDILDME----PILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV  139 (227)
Q Consensus        67 ~g~~VlDLGaaPGg--WsQva~~~~~~~~~~~~VigVDl~~~~----~i~gv~~~~gDi~~~~~~~~i~~~l~~-~~DlV  139 (227)
T Consensus       163 ~g~~VlV~GaG~vGl~~~~~a-k~~G----a~~Vi~~d~~~~kl~~a~~lGa~~~-i~~~~~~~~~~~~~~t~~~G~Dvv  236 (341)
T PRK05396        163 VGEDVLITGAGPIGIMAAAVA-KHVG----ARHVVITDVNEYRLELARKMGATRA-VNVAKEDLRDVMAELGMTEGFDVG  236 (341)
T ss_pred             CCCEEEEECCCCCCHHHHHHH-HHCC----CEEEEEEECCHHHHHHHHHCCCCEE-EECCCHHHHHHHHHHHCCCCCEEE
T ss_conf             888699989975432999999-9849----9289999489999998986499499-968850689999997489997699


Q ss_pred             EECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             75320211022210157889899988987641148774699993059
Q gi|254780313|r  140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG  186 (227)
Q Consensus       140 lSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F~G  186 (227)
T Consensus       237 i-d----~~G~~~------------~~~~~~~~l~~gG~vv~~G~~~  266 (341)
T PRK05396        237 L-E----MSGAPS------------AFRQMLDAMNHGGRIAMLGIPP  266 (341)
T ss_pred             E-E----CCCCHH------------HHHHHHHHHHCCCEEEEEECCC
T ss_conf             9-8----789899------------9999999863598999995579