HHsearch alignment for GI: 254780313 and conserved domain: PRK11705

Probab=98.38  E-value=3.7e-06  Score=59.07  Aligned_cols=109  Identities=25%  Similarity=0.307  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCC------CCCC--CEEEECCCCHH
Q ss_conf             999999998645831379678885045530689999970687883278641121333------4698--17830112207
Q gi|254780313|r   51 SAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME------PILG--VKFFKFDFLDL  122 (227)
Q Consensus        51 aafKL~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~~------~i~g--v~~~~gDi~~~  122 (227)
T Consensus       152 Q~~Kl~~i~~kl~l-~~G~~VLeIGcGWGgla~~aA~~~g-----~~VtgiTlS~eQ~~~a~~r~~gl~v~v~l~DY---  222 (383)
T PRK11705        152 QEAKLDLICRKLQL-KPGMRVLDIGCGWGGLARYAAEHYG-----VSVVGVTISAEQQKLAQERCAGLPVEIRLQDY---  222 (383)
T ss_pred             HHHHHHHHHHHCCC-CCCCEEEEECCCHHHHHHHHHHHCC-----CEEEEEECCHHHHHHHHHHHCCCCCEEEECCH---
T ss_conf             99999999986489-9999798857874999999999749-----75999858899999999997389878997152---


Q ss_pred             HHHHHHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             99999997313887489753202110222101578898999889876411487746999930
Q gi|254780313|r  123 DSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF  184 (227)
Q Consensus       123 ~~~~~i~~~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F  184 (227)
T Consensus       223 --R-----d~~g~fD~IvSIeM~EhVG~~~~---------~~yF~~i~~lLkp~G~~~lqtI  268 (383)
T PRK11705        223 --R-----DLNGQFDRIVSVGMFEHVGPKNY---------RTYFEVVDRCLKPDGLFLLHTI  268 (383)
T ss_pred             --H-----HCCCCCCEEEEEEHHHHCCHHHH---------HHHHHHHHHHCCCCCEEEEEEE
T ss_conf             --4-----43677355999714865287779---------9999999985699973999993