HHsearch alignment for GI: 254780313 and conserved domain: PRK11783

>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional.
Probab=94.48  E-value=0.3  Score=28.31  Aligned_cols=103  Identities=19%  Similarity=0.321  Sum_probs=65.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC---------C--CCC--CCCEEEECCCCHHHHHHHHHHHC
Q ss_conf             3796788850455306899999706878832786411213---------3--346--98178301122079999999731
Q gi|254780313|r   66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD---------M--EPI--LGVKFFKFDFLDLDSWEFIRQAI  132 (227)
Q Consensus        66 k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~---------~--~~i--~gv~~~~gDi~~~~~~~~i~~~l  132 (227)
T Consensus       551 a~gk~fLNLF~YTgt~sv~Aa~-----gGA~~t~sVD~S~tyl~Wa~~N~~lN~~~~~~h~~v~aD~~~-----wl~~-~  619 (716)
T PRK11783        551 AKGKRFLNLFAYTGTASVHAAL-----GGAKSTTTVDMSNTYLEWAERNFALNGLSGRQHRFIQADCLA-----WLKE-A  619 (716)
T ss_pred             HCCCCEEEEEECCCCEEHHHHH-----CCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHH-----HHHH-C
T ss_conf             0788464312225610213352-----796122786270879999999998549996347389640899-----9985-7


Q ss_pred             CCCCCEEEECCCHHHCCCCCC--------HHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-ECCC
Q ss_conf             388748975320211022210--------157889899988987641148774699993-0599
Q gi|254780313|r  133 GGNPDLVLSDMAYPTIGHRKI--------DHLRTMSLCEAATFFALEMLNIGGDFLVKT-FQGG  187 (227)
Q Consensus       133 ~~~~DlVlSDmapn~SG~~~~--------D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~-F~G~  187 (227)
T Consensus       620 ~~~fDli~~DP-PtFSnSk~m~~~~dvqrDh~~l-------i~~~~~~L~~~G~l~FS~N~r~F  675 (716)
T PRK11783        620 REQFDLIFIDP-PTFSNSKRMEDSFDVQRDHVAL-------IKLAMRLLRPGGTLYFSNNKRGF  675 (716)
T ss_pred             CCCCCEEEECC-CCCCCCCCCCCCCCCCCCHHHH-------HHHHHHHCCCCCEEEEECCCCCC
T ss_conf             77667899889-9998766678863220309999-------99999860899689996288763