>TIGR00438 rrmJ ribosomal RNA large subunit methyltransferase J; InterPro: IPR004512 The ribosomal RNA large subunit methyltransferase J 2.1.1 from EC methylates the 23S rRNA. It specifically methylates the uridine in position 2552 of 23s rRNA in the 50S particle using S-adenosyl-L-methionine as a substrate. It was previously known as cell division protein ftsJ.; GO: 0016436 rRNA (uridine) methyltransferase activity, 0006364 rRNA processing.

Probab=100.00 E-value=0 Score=520.03 Aligned_cols=187 Identities=42% Similarity=0.670 Sum_probs=183.6 Q ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCC--CCCCCE Q ss_conf 999999988184479999999998645831379678885045530689999970687883278641121333--469817 Q gi|254780313|r 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME--PILGVK 113 (227) Q Consensus 36 D~y~~~Ak~~gyrsRaafKL~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~~--~i~gv~ 113 (227) T Consensus 1 D~Yy~~AkK~~yRSRA~fKL~qln~~~kLik~G~~VlDLGAAPGGWsQva~~~~G~---kG~ViA~Dl~~~k~FP~~nv~ 77 (192) T TIGR00438 1 DYYYQKAKKEKYRSRASFKLLQLNQKFKLIKPGDTVLDLGAAPGGWSQVAVEQVGG---KGRVIAVDLQPMKGFPIENVD 77 (192) T ss_pred CCCHHHHHHCCCCHHHHHHHHHHCCCCCCEECCCEEEECCCCCCCHHHHHHHHHCC---CCEEEEEECCCCCCCCCCCEE T ss_conf 94124243248801667899985021561107886786578987387788776068---533899854557885646614 Q ss_pred EEECCCCHHHHHHHHHHHCCC---CCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH Q ss_conf 830112207999999973138---87489753202110222101578898999889876411487746999930599989 Q gi|254780313|r 114 FFKFDFLDLDSWEFIRQAIGG---NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190 (227) Q Consensus 114 ~~~gDi~~~~~~~~i~~~l~~---~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F~G~~~~ 190 (227) T Consensus 78 fi~GDftdee~l~ki~~~~g~dekk~DVV~SDaaP~~SG~~~iDh~Rs~dLv~~aL~ia~~vL~~~GnfvvKvFqGe~~d 157 (192) T TIGR00438 78 FIRGDFTDEEVLNKILERVGDDEKKVDVVMSDAAPNISGIWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVFQGEEID 157 (192) T ss_pred EEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHH T ss_conf 75447678789999998578987437789852688878987543443799999999999998615898999985374288 Q ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCEEEEEECCC Q ss_conf 99999986258469976866575582498983075 Q gi|254780313|r 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225 (227) Q Consensus 191 ~l~~~l~~~F~~V~~~KP~aSR~~S~E~Ylv~~gf 225 (227) T Consensus 158 ~y~~e~r~~F~~~k~~kP~aSRk~SaEvYiva~~~ 192 (192) T TIGR00438 158 EYLNELRKLFEKVKVTKPQASRKRSAEVYIVAKRF 192 (192) T ss_pred HHHHHHHHCCCEEEEECCHHHHHCCCEEEEEEECC T ss_conf 99997652054767447831320574689975069

HHsearch alignment for GI: 254780313 and conserved domain: TIGR00438