HHsearch alignment for GI: 254780313 and conserved domain: TIGR02752
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase; InterPro: IPR014122 MenG is a generic term for a methyltransferase that catalyses the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species..
Probab=97.47 E-value=0.00025 Score=47.55 Aligned_cols=118 Identities=15% Similarity=0.208 Sum_probs=83.3
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC-----------CCCCCCCEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 3796788850455306899999706878832786411213-----------33469817830112207999999973138
Q gi|254780313|r 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD-----------MEPILGVKFFKFDFLDLDSWEFIRQAIGG 134 (227)
Q Consensus 66 k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~-----------~~~i~gv~~~~gDi~~~~~~~~i~~~l~~ 134 (227)
T Consensus 44 ~~G~~~ldvCCGt~dW~~~l~~~~G~~G---~v~Gldfs~nml~~~~~k~~~~~~~~~~l~hGnam~lP~-------~~~ 113 (231)
T TIGR02752 44 QKGKKALDVCCGTADWAIALAEAVGKEG---EVKGLDFSENMLSVGKQKVKDAKLSNVELVHGNAMELPY-------DDN 113 (231)
T ss_pred HHCCHHHHHCCCCHHHHHHHHHHHCCCC---CEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCHHCCCC-------CCC
T ss_conf 4041211210373378889888617777---167400358899999988875432002223052001787-------766
Q ss_pred CCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCEEE
Q ss_conf 8748975320211022210157889899988987641148774699993059998999999986258469
Q gi|254780313|r 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204 (227)
Q Consensus 135 ~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F~G~~~~~l~~~l~~~F~~V~ 204 (227)
T Consensus 114 ~fdyvtiGf-----GlrnvPdy------~~vl~em~rv~kPGG~~~C~~tsqP~~~~~~q~y~~yf~~~m 172 (231)
T TIGR02752 114 SFDYVTIGF-----GLRNVPDY------MTVLKEMARVVKPGGKVVCLETSQPTLPGFKQLYFFYFKYIM 172 (231)
T ss_pred CCCEEEECC-----CCCCHHHH------HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 612577525-----51230269------999999888627997179862577625799999999999998