HHsearch alignment for GI: 254780313 and conserved domain: TIGR03533
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific. Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.
Probab=98.13 E-value=5.5e-05 Score=51.71 Aligned_cols=119 Identities=23% Similarity=0.261 Sum_probs=74.8
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCC---------C--CCC-CCEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 7967888504553068999997068788327864112133---------3--469-817830112207999999973138
Q gi|254780313|r 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM---------E--PIL-GVKFFKFDFLDLDSWEFIRQAIGG 134 (227)
Q Consensus 67 ~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~---------~--~i~-gv~~~~gDi~~~~~~~~i~~~l~~ 134 (227)
T Consensus 121 ~~~~iLDlGtGSG~Iai~la~~~p----~~~v~a~DiS~~Al~~A~~N~~~~~l~~rv~~~~~D~~~~--------~~~~ 188 (284)
T TIGR03533 121 PVKRILDLCTGSGCIAIACAYAFP----EAEVDAVDISPDALAVAEINIERHGLEDRVTLIQSDLFAA--------LPGR 188 (284)
T ss_pred CCCEEEEECCCCHHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHH--------CCCC
T ss_conf 777155521680799999998789----9879999899999999999998608543368883514331--------4577
Q ss_pred CCCEEEECCCHHHCCC------CCCHHH---------HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH
Q ss_conf 8748975320211022------210157---------8898999889876411487746999930599989999999862
Q gi|254780313|r 135 NPDLVLSDMAYPTIGH------RKIDHL---------RTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199 (227)
Q Consensus 135 ~~DlVlSDmapn~SG~------~~~D~~---------~~~~L~~~al~~A~~~Lk~gG~fV~K~F~G~~~~~l~~~l~~~ 199 (227)
T Consensus 189 ~fDlIVSNP-PYI~~~e~~~l~~ev~~EP~~AL~gG~dGL~~yr~Ii~~a~~~L~pgG~l~lEi--G~~Q~~----~~~~ 261 (284)
T TIGR03533 189 KYDLIVSNP-PYVDAEDMADLPAEYHHEPELALASGEDGLDLVRRILAEAADHLNENGVLVVEV--GNSMEA----LEEA 261 (284)
T ss_pred CCCEEEECC-CCCCHHHHHHCCHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE--CCCHHH----HHHH
T ss_conf 778799779-978846554497641158699875895587999999998898425697899997--978899----9986
Q ss_pred CCEEE
Q ss_conf 58469
Q gi|254780313|r 200 FQKVI 204 (227)
Q Consensus 200 F~~V~ 204 (227)
T Consensus 262 ~~~~~ 266 (284)
T TIGR03533 262 YPDVP 266 (284)
T ss_pred CCCCC
T ss_conf 68999