HHsearch alignment for GI: 254780313 and conserved domain: cd02440

>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Probab=98.73  E-value=4.1e-08  Score=71.29  Aligned_cols=94  Identities=22%  Similarity=0.255  Sum_probs=65.9

Q ss_pred             EEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCC-----------CCCCCCEEEECCCCHHHHHHHHHHHCCCCCCE
Q ss_conf             7888504553068999997068788327864112133-----------34698178301122079999999731388748
Q gi|254780313|r   70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM-----------EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL  138 (227)
Q Consensus        70 ~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~-----------~~i~gv~~~~gDi~~~~~~~~i~~~l~~~~Dl  138 (227)
T Consensus         1 rVLDiGcG~G~~~~~l~~~-----~~~~v~~iD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~------~~~~~fD~   69 (107)
T cd02440           1 RVLDLGCGTGALALALASG-----PGARVTGVDISPVALELARKAAAALLADNVEVLKGDAEELPP------EADESFDV   69 (107)
T ss_pred             CEEEEECCCCHHHHHHHHC-----CCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCHHHCCH------HHCCCEEE
T ss_conf             9999988879999999956-----898899998988899999998753278864671488678863------20575319


Q ss_pred             EEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             9753202110222101578898999889876411487746999930
Q gi|254780313|r  139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF  184 (227)
Q Consensus       139 VlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F  184 (227)
T Consensus        70 V~~~~~~~~----~~~~------~~~~l~~~~~~LkpgG~~~is~~  105 (107)
T cd02440          70 IISDPPLHH----LVED------LARFLEEARRLLKPGGVLVLTLV  105 (107)
T ss_pred             EEEECCEEC----CCCC------HHHHHHHHHHHCCCCCEEEEEEE
T ss_conf             999175010----6518------99999999987485819999998