HHsearch alignment for GI: 254780313 and conserved domain: pfam00398

Probab=95.45  E-value=0.045  Score=33.44  Aligned_cols=77  Identities=25%  Similarity=0.396  Sum_probs=48.9

Q ss_pred             HHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC---------CCCCCCCEEEECCCCHHHHHHHH
Q ss_conf             986458313796788850455306899999706878832786411213---------33469817830112207999999
Q gi|254780313|r   58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD---------MEPILGVKFFKFDFLDLDSWEFI  128 (227)
Q Consensus        58 Id~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~---------~~~i~gv~~~~gDi~~~~~~~~i  128 (227)
T Consensus        22 Iv~~~~~-~~~d~VlEIGPG~G~LT~~L~~~~~------~v~aiE~D~~l~~~L~~~~~~~~~~~ii~~D~l~~d~~~--   92 (258)
T pfam00398        22 IVDKANL-QESDTVLEIGPGKGALTEELAKRAK------QVVAIEIDPRLAKRLQKKLALHPNVEVVHQDFLKFSFPK--   92 (258)
T ss_pred             HHHHCCC-CCCCEEEEECCCHHHHHHHHHHCCC------CEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHCCCCCC--
T ss_conf             9997089-9999799979962399999996169------479995447799999986442897799966301057545--


Q ss_pred             HHHCCCCCCEEEECCCHHHC
Q ss_conf             97313887489753202110
Q gi|254780313|r  129 RQAIGGNPDLVLSDMAYPTI  148 (227)
Q Consensus       129 ~~~l~~~~DlVlSDmapn~S  148 (227)
T Consensus        93 -----~~~~~vvgNLPY~Is  107 (258)
T pfam00398        93 -----HEPFLVVGNIPYNIT  107 (258)
T ss_pred             -----CCCEEEEECCCCCCC
T ss_conf             -----786168944886341